Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KLC4 Sequence: fasta or formatted (315aa) NCBI GI: 19923891
Description:

kinesin-like 8 isoform c

Referenced in:

Kinesins
Tetratricopeptide Domains

Other entries for this name:
alt prot [619aa] kinesin-like 8 isoform a
alt prot [619aa] kinesin-like 8 isoform a
alt prot [637aa] kinesin-like 8 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         26           2
 C cysteine            1.9          6           2
 D aspartate           4.4         14           2
 E glutamate          11.1         35           4
 F phenylalanine       1.0          3           1
 G glycine             7.3         23           2
 H histidine           4.4         14           2
 I isoleucine          2.5          8           1
 K lysine              3.2         10           2
 L leucine            13.7         43           2
 M methionine          1.3          4           1
 N asparagine          2.5          8           1
 P proline             4.4         14           2
 Q glutamine           8.9         28           2
 R arginine            7.3         23           2
 S serine              7.0         22           1
 T threonine           4.1         13           1
 V valine              4.4         14           1
 W tryptophan          0.3          1           1
 Y tyrosine            1.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin-like 8 isoform c 
KLC4                  0.914   kinesin-like 8 isoform b 
KLC4                  0.914   kinesin-like 8 isoform a 
KLC4                  0.914   kinesin-like 8 isoform a 
KLC1                  0.621   kinesin light chain 1 isoform 3 
KLC1                  0.621   kinesin light chain 1 isoform 2 
KLC1                  0.621   kinesin light chain 1 isoform 1 
KLC2                  0.579   kinesin light chain 2 isoform 1 
KLC2                  0.579   kinesin light chain 2 isoform 1 
KLC2                  0.579   kinesin light chain 2 isoform 1 
KLC3                  0.517   kinesin light chain 3 
KLC2                  0.308   kinesin light chain 2 isoform 2 
NPHP3                 0.070   nephrocystin 3 
MYH15                 0.033   myosin, heavy polypeptide 15 
LOC100133758          0.031   PREDICTED: hypothetical protein, partial 
FLJ44817              0.031   similar to pleckstrin homology domain protein (5V32...
PCNT                  0.030   pericentrin 
RAI14                 0.028   retinoic acid induced 14 isoform d 
RAI14                 0.028   retinoic acid induced 14 isoform c 
RAI14                 0.028   retinoic acid induced 14 isoform b 
RAI14                 0.028   retinoic acid induced 14 isoform a 
RAI14                 0.028   retinoic acid induced 14 isoform a 
RAI14                 0.028   retinoic acid induced 14 isoform a 
CROCC                 0.028   ciliary rootlet coiled-coil 
CENPF                 0.026   centromere protein F 
LOC100133220          0.026   PREDICTED: hypothetical protein 
MYO18A                0.026   myosin 18A isoform a 
MAP7                  0.026   microtubule-associated protein 7 
CCDC147               0.026   coiled-coil domain containing 147 
TMEM57                0.025   transmembrane protein 57 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press