Guide to the Human Genome
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Name: C8orf45 Sequence: fasta or formatted (681aa) NCBI GI: 209954821
Description:

minichromosome maintenance complex component-like isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {632aa} minichromosome maintenance complex component-like isoform b
alt prot {590aa} minichromosome maintenance complex component-like isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         46           2
 C cysteine            3.2         22           1
 D aspartate           4.4         30           2
 E glutamate           5.3         36           2
 F phenylalanine       5.7         39           1
 G glycine             4.8         33           2
 H histidine           1.5         10           1
 I isoleucine          7.3         50           2
 K lysine              5.4         37           2
 L leucine            12.3         84           2
 M methionine          1.5         10           2
 N asparagine          5.0         34           2
 P proline             3.7         25           2
 Q glutamine           5.1         35           3
 R arginine            4.1         28           2
 S serine              8.2         56           3
 T threonine           6.6         45           2
 V valine              5.1         35           2
 W tryptophan          0.3          2           1
 Y tyrosine            3.5         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   minichromosome maintenance complex component-like i... 
C8orf45               0.916   minichromosome maintenance complex component-like i...
C8orf45               0.865   minichromosome maintenance complex component-like i...
MCM3                  0.011   minichromosome maintenance complex component 3 
MCM8                  0.008   minichromosome maintenance complex component 8 isofo...
MCM8                  0.008   minichromosome maintenance complex component 8 isofo...
MCM4                  0.007   minichromosome maintenance complex component 4 [Homo...
MCM4                  0.007   minichromosome maintenance complex component 4 [Homo...
MCM7                  0.006   minichromosome maintenance complex component 7 isofo...
MCM7                  0.006   minichromosome maintenance complex component 7 isofo...
MCM6                  0.006   minichromosome maintenance complex component 6 
MCM2                  0.006   minichromosome maintenance complex component 2 [Homo...
ABCG5                 0.004   ATP-binding cassette sub-family G member 5 
FLJ12993              0.004   hypothetical protein LOC441027 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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