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Search of human proteins with 19923717
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923717 deltex 3-like [Homo sapiens]
(740 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923717 deltex 3-like [Homo sapiens] 1490 0.0
gi|30425428 deltex homolog 3 [Homo sapiens] 220 4e-57
gi|156564384 deltex 2 isoform a [Homo sapiens] 162 1e-39
gi|156564382 deltex 2 isoform a [Homo sapiens] 162 1e-39
gi|156564380 deltex 2 isoform a [Homo sapiens] 162 1e-39
gi|156564386 deltex 2 isoform b [Homo sapiens] 159 9e-39
gi|148237498 deltex 4 homolog [Homo sapiens] 150 3e-36
gi|41352718 deltex homolog 1 [Homo sapiens] 149 9e-36
gi|14550405 postreplication repair protein hRAD18p [Homo sapiens] 49 2e-05
gi|51479192 ring finger protein 1 [Homo sapiens] 47 5e-05
gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo ... 47 6e-05
gi|239048909 checkpoint with forkhead and ring finger domains is... 46 1e-04
gi|239048905 checkpoint with forkhead and ring finger domains is... 46 1e-04
gi|239048862 checkpoint with forkhead and ring finger domains is... 46 1e-04
gi|239048792 checkpoint with forkhead and ring finger domains is... 46 1e-04
gi|239048907 checkpoint with forkhead and ring finger domains is... 46 1e-04
gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Hom... 46 1e-04
gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo s... 45 2e-04
gi|50233824 ring finger and WD repeat domain 2 isoform d24 [Homo... 45 2e-04
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 45 2e-04
gi|6005747 ring finger protein 2 [Homo sapiens] 44 5e-04
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 44 7e-04
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 44 7e-04
gi|46397375 ring finger protein 220 [Homo sapiens] 44 7e-04
gi|165932346 ring finger protein 180 isoform 1 [Homo sapiens] 42 0.002
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 40 0.006
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 40 0.008
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 40 0.008
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 40 0.008
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 40 0.008
>gi|19923717 deltex 3-like [Homo sapiens]
Length = 740
Score = 1490 bits (3857), Expect = 0.0
Identities = 740/740 (100%), Positives = 740/740 (100%)
Query: 1 MASHLRPPSPLLVRVYKSGPRVRRKLESYFQSSKSSGGGECTVSTQEHEAPGTFRVEFSE 60
MASHLRPPSPLLVRVYKSGPRVRRKLESYFQSSKSSGGGECTVSTQEHEAPGTFRVEFSE
Sbjct: 1 MASHLRPPSPLLVRVYKSGPRVRRKLESYFQSSKSSGGGECTVSTQEHEAPGTFRVEFSE 60
Query: 61 RAAKERVLKKGEHQILVDEKPVPIFLVPTENSIKKNTRPQISSLTQSQAETPSGDMHQHE 120
RAAKERVLKKGEHQILVDEKPVPIFLVPTENSIKKNTRPQISSLTQSQAETPSGDMHQHE
Sbjct: 61 RAAKERVLKKGEHQILVDEKPVPIFLVPTENSIKKNTRPQISSLTQSQAETPSGDMHQHE 120
Query: 121 GHIPNAVDSCLQKIFLTVTADLNCNLFSKEQRAYITTLCPSIRKMEGHDGIEKVCGDFQD 180
GHIPNAVDSCLQKIFLTVTADLNCNLFSKEQRAYITTLCPSIRKMEGHDGIEKVCGDFQD
Sbjct: 121 GHIPNAVDSCLQKIFLTVTADLNCNLFSKEQRAYITTLCPSIRKMEGHDGIEKVCGDFQD 180
Query: 181 IERIHQFLSEQFLESEQKQQFSPSMTERKPLSQQERDSCISPSEPETKAEQKSNYFEVPL 240
IERIHQFLSEQFLESEQKQQFSPSMTERKPLSQQERDSCISPSEPETKAEQKSNYFEVPL
Sbjct: 181 IERIHQFLSEQFLESEQKQQFSPSMTERKPLSQQERDSCISPSEPETKAEQKSNYFEVPL 240
Query: 241 PYFEYFKYICPDKINSIEKRFGVNIEIQESSPNMVCLDFTSSRSGDLEAARESFASEFQK 300
PYFEYFKYICPDKINSIEKRFGVNIEIQESSPNMVCLDFTSSRSGDLEAARESFASEFQK
Sbjct: 241 PYFEYFKYICPDKINSIEKRFGVNIEIQESSPNMVCLDFTSSRSGDLEAARESFASEFQK 300
Query: 301 NTEPLKQECVSLADSKQANKFKQELNHQFTKLLIKEKGGELTLLGTQDDISAAKQKISEA 360
NTEPLKQECVSLADSKQANKFKQELNHQFTKLLIKEKGGELTLLGTQDDISAAKQKISEA
Sbjct: 301 NTEPLKQECVSLADSKQANKFKQELNHQFTKLLIKEKGGELTLLGTQDDISAAKQKISEA 360
Query: 361 FVKIPVKLFAANYMMNVIEVDSAHYKLLETELLQEISEIEKRYDICSKVSEKGQKTCILF 420
FVKIPVKLFAANYMMNVIEVDSAHYKLLETELLQEISEIEKRYDICSKVSEKGQKTCILF
Sbjct: 361 FVKIPVKLFAANYMMNVIEVDSAHYKLLETELLQEISEIEKRYDICSKVSEKGQKTCILF 420
Query: 421 ESKDRQVDLSVHAYASFIDAFQHASCQLMREVLLLKSLGKERKHLHQTKFADDFRKRHPN 480
ESKDRQVDLSVHAYASFIDAFQHASCQLMREVLLLKSLGKERKHLHQTKFADDFRKRHPN
Sbjct: 421 ESKDRQVDLSVHAYASFIDAFQHASCQLMREVLLLKSLGKERKHLHQTKFADDFRKRHPN 480
Query: 481 VHFVLNQESMTLTGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASP 540
VHFVLNQESMTLTGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASP
Sbjct: 481 VHFVLNQESMTLTGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASP 540
Query: 541 PLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
PLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ
Sbjct: 541 PLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
Query: 601 TSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQR 660
TSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQR
Sbjct: 601 TSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQR 660
Query: 661 TAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYG 720
TAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYG
Sbjct: 661 TAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYG 720
Query: 721 YPDPSYLKRVKEELKAKGIE 740
YPDPSYLKRVKEELKAKGIE
Sbjct: 721 YPDPSYLKRVKEELKAKGIE 740
>gi|30425428 deltex homolog 3 [Homo sapiens]
Length = 347
Score = 220 bits (560), Expect = 4e-57
Identities = 109/203 (53%), Positives = 132/203 (65%), Gaps = 8/203 (3%)
Query: 540 PPLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTC 599
PPL + EA E ++ C IC+ I N K L KC+H FC CI +A+ K CP C
Sbjct: 147 PPLPPRLREEAEE----QESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
Query: 600 QTSYGIQKGNQPEGSMVFTVSRDS---LPGYESFGTIVITYSMKAGIQTEEHPNPGKRYP 656
YG GNQP+ + VS+D+ LP YE +GTIVI Y G+Q EHPNPG RYP
Sbjct: 203 GRFYGQLVGNQPQNGRML-VSKDATLLLPSYEKYGTIVIQYVFPPGVQGAEHPNPGVRYP 261
Query: 657 GIQRTAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFGGP 716
G R AYLPD EG KVL L +AFDQ+L FT+G S G +VITWNDIHHKTS GGP
Sbjct: 262 GTTRVAYLPDCPEGNKVLTLFRKAFDQRLTFTIGTSMTTGRPNVITWNDIHHKTSCTGGP 321
Query: 717 EMYGYPDPSYLKRVKEELKAKGI 739
+++GYPDP+YL RV+EEL+AKGI
Sbjct: 322 QLFGYPDPTYLTRVQEELRAKGI 344
>gi|156564384 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 162 bits (410), Expect = 1e-39
Identities = 105/280 (37%), Positives = 145/280 (51%), Gaps = 38/280 (13%)
Query: 490 MTLTGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGS---- 545
M+ GLP L++A Q S A + + H + + K A+P +
Sbjct: 343 MSAIGLPVCLSRAPQPT------SPPASRLASKSHGSVKRLRKMSVKGATPKPEPEPEQV 396
Query: 546 VSSEASELDKKEKGICVICMDTIS----------NKKV-------LPKCKHEFCAPCI-- 586
+ + EL C+ICM+ +S +K + L KC H F C+
Sbjct: 397 IKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLA 456
Query: 587 -----NKAMSYKPICPTCQTSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKA 641
NK S + CP+C+T YG + G QP+G M + SLPG+E GTI+I YS+
Sbjct: 457 MYCNGNKDGSLQ--CPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYSIPH 514
Query: 642 GIQTEEHPNPGKRYP--GIQRTAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSD 699
GIQ EHPNPGK + G R YLPDN +GRKVL+LL A+ ++LIFTVG S G +D
Sbjct: 515 GIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTGETD 574
Query: 700 VITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGI 739
+ WN+IHHKT +GYPDP+YL+ V EL A+G+
Sbjct: 575 TVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGV 614
>gi|156564382 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 162 bits (410), Expect = 1e-39
Identities = 105/280 (37%), Positives = 145/280 (51%), Gaps = 38/280 (13%)
Query: 490 MTLTGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGS---- 545
M+ GLP L++A Q S A + + H + + K A+P +
Sbjct: 343 MSAIGLPVCLSRAPQPT------SPPASRLASKSHGSVKRLRKMSVKGATPKPEPEPEQV 396
Query: 546 VSSEASELDKKEKGICVICMDTIS----------NKKV-------LPKCKHEFCAPCI-- 586
+ + EL C+ICM+ +S +K + L KC H F C+
Sbjct: 397 IKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLA 456
Query: 587 -----NKAMSYKPICPTCQTSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKA 641
NK S + CP+C+T YG + G QP+G M + SLPG+E GTI+I YS+
Sbjct: 457 MYCNGNKDGSLQ--CPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYSIPH 514
Query: 642 GIQTEEHPNPGKRYP--GIQRTAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSD 699
GIQ EHPNPGK + G R YLPDN +GRKVL+LL A+ ++LIFTVG S G +D
Sbjct: 515 GIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTGETD 574
Query: 700 VITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGI 739
+ WN+IHHKT +GYPDP+YL+ V EL A+G+
Sbjct: 575 TVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGV 614
>gi|156564380 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 162 bits (410), Expect = 1e-39
Identities = 105/280 (37%), Positives = 145/280 (51%), Gaps = 38/280 (13%)
Query: 490 MTLTGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGS---- 545
M+ GLP L++A Q S A + + H + + K A+P +
Sbjct: 343 MSAIGLPVCLSRAPQPT------SPPASRLASKSHGSVKRLRKMSVKGATPKPEPEPEQV 396
Query: 546 VSSEASELDKKEKGICVICMDTIS----------NKKV-------LPKCKHEFCAPCI-- 586
+ + EL C+ICM+ +S +K + L KC H F C+
Sbjct: 397 IKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLA 456
Query: 587 -----NKAMSYKPICPTCQTSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKA 641
NK S + CP+C+T YG + G QP+G M + SLPG+E GTI+I YS+
Sbjct: 457 MYCNGNKDGSLQ--CPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYSIPH 514
Query: 642 GIQTEEHPNPGKRYP--GIQRTAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSD 699
GIQ EHPNPGK + G R YLPDN +GRKVL+LL A+ ++LIFTVG S G +D
Sbjct: 515 GIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTGETD 574
Query: 700 VITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGI 739
+ WN+IHHKT +GYPDP+YL+ V EL A+G+
Sbjct: 575 TVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGV 614
>gi|156564386 deltex 2 isoform b [Homo sapiens]
Length = 575
Score = 159 bits (402), Expect = 9e-39
Identities = 90/205 (43%), Positives = 119/205 (58%), Gaps = 28/205 (13%)
Query: 561 CVICMDTIS----------NKKV-------LPKCKHEFCAPCI-------NKAMSYKPIC 596
C+ICM+ +S +K + L KC H F C+ NK S + C
Sbjct: 365 CIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLAMYCNGNKDGSLQ--C 422
Query: 597 PTCQTSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKAGIQTEEHPNPGKRYP 656
P+C+T YG + G QP+G M + SLPG+E GTI+I YS+ GIQ EHPNPGK +
Sbjct: 423 PSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYSIPHGIQGPEHPNPGKPFT 482
Query: 657 --GIQRTAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFG 714
G R YLPDN +GRKVL+LL A+ ++LIFTVG S G +D + WN+IHHKT
Sbjct: 483 ARGFPRQCYLPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTGETDTVVWNEIHHKTEMDR 542
Query: 715 GPEMYGYPDPSYLKRVKEELKAKGI 739
+GYPDP+YL+ V EL A+G+
Sbjct: 543 NITGHGYPDPNYLQNVLAELAAQGV 567
>gi|148237498 deltex 4 homolog [Homo sapiens]
Length = 619
Score = 150 bits (380), Expect = 3e-36
Identities = 99/277 (35%), Positives = 135/277 (48%), Gaps = 33/277 (11%)
Query: 490 MTLTGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASPP---LKGSV 546
M+ GLP L + + VL +S K + T +K P LK +
Sbjct: 339 MSAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTSRKTTKKQAKKGKTPEEVLKKYL 398
Query: 547 SSEASELDKKEKGICVICMDTISNKK---------------VLPKCKHEFCAPCI----- 586
D+ C ICM+ ++ L +C H + C+
Sbjct: 399 QKVRHPPDED----CTICMERLTAPSGYKGPQPTVKPDLVGKLSRCGHVYHIYCLVAMYN 454
Query: 587 --NKAMSYKPICPTCQTSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKAGIQ 644
NK S + CPTC+T YG++ G QP G M + + SLPG+ TI I YS+ GIQ
Sbjct: 455 NGNKDGSLQ--CPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHPDCKTIRIIYSIPPGIQ 512
Query: 645 TEEHPNPGKRYP--GIQRTAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVIT 702
EHPNPGK + G R YLPD+++GRKVLKLL A+D++LIF +G S G SD +
Sbjct: 513 GPEHPNPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFAIGTSSTTGESDTVI 572
Query: 703 WNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGI 739
WN++HHKT +GYPD +YL V EL A+GI
Sbjct: 573 WNEVHHKTEFGSNLTGHGYPDANYLDNVLAELAAQGI 609
>gi|41352718 deltex homolog 1 [Homo sapiens]
Length = 620
Score = 149 bits (376), Expect = 9e-36
Identities = 85/205 (41%), Positives = 113/205 (55%), Gaps = 28/205 (13%)
Query: 561 CVICMD----------TISNKKVLP-------KCKHEFCAPCI-------NKAMSYKPIC 596
C ICM+ + +K V P +C H + C+ NK S + C
Sbjct: 411 CTICMERLVTASGYEGVLRHKGVRPELVGRLGRCGHMYHLLCLVAMYSNGNKDGSLQ--C 468
Query: 597 PTCQTSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKAGIQTEEHPNPGKRYP 656
PTC+ YG + G QP G M F + SLPG+ TI I Y + GIQ EHPNPGK++
Sbjct: 469 PTCKAIYGEKTGTQPPGKMEFHLIPHSLPGFPDTQTIRIVYDIPTGIQGPEHPNPGKKFT 528
Query: 657 --GIQRTAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFG 714
G R YLP+N++GRKVL+LL A++++LIFT+G S G SD + WN+IHHKT
Sbjct: 529 ARGFPRHCYLPNNEKGRKVLRLLITAWERRLIFTIGTSNTTGESDTVVWNEIHHKTEFGS 588
Query: 715 GPEMYGYPDPSYLKRVKEELKAKGI 739
+GYPD SYL V EL A+G+
Sbjct: 589 NLTGHGYPDASYLDNVLAELTAQGV 613
>gi|14550405 postreplication repair protein hRAD18p [Homo sapiens]
Length = 495
Score = 48.9 bits (115), Expect = 2e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 561 CVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTC 599
C IC + + ++P+C H +C+ CI K +SYK CPTC
Sbjct: 25 CGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTC 63
>gi|51479192 ring finger protein 1 [Homo sapiens]
Length = 406
Score = 47.4 bits (111), Expect = 5e-05
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 520 LKEGHETPMDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKH 579
L E H TP + D ++ A P S SEL +C IC+D + N +C H
Sbjct: 18 LYELHRTPQEAIMDGTEIAVSP-----RSLHSEL------MCPICLDMLKNTMTTKECLH 66
Query: 580 EFCAPCINKAM-SYKPICPTCQTSYGIQKGNQPEGSMVFTVSR 621
FC+ CI A+ S CPTC+ ++ +P+ + +S+
Sbjct: 67 RFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISK 109
>gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo
sapiens]
Length = 1045
Score = 47.0 bits (110), Expect = 6e-05
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 530 IDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKA 589
+D+ KA + L+ +V ++AS K C IC+D N L +C H+FC C+ +
Sbjct: 77 MDNFSPKAGTSKLQQTVPADASPDSK-----CPICLDRFDNVSYLDRCLHKFCFRCVQEW 131
Query: 590 MSYKPICPTCQTSY 603
K CP C+ +
Sbjct: 132 SKNKAECPLCKQPF 145
>gi|239048909 checkpoint with forkhead and ring finger domains
isoform 5 [Homo sapiens]
Length = 572
Score = 46.2 bits (108), Expect = 1e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 546 VSSEASELDKKEKGI-CVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
V + A + DK E+ + C+IC D + + L C H FCA C + M +CPTC+
Sbjct: 196 VRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCR 251
>gi|239048905 checkpoint with forkhead and ring finger domains
isoform 3 [Homo sapiens]
Length = 652
Score = 46.2 bits (108), Expect = 1e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 546 VSSEASELDKKEKGI-CVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
V + A + DK E+ + C+IC D + + L C H FCA C + M +CPTC+
Sbjct: 276 VRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCR 331
>gi|239048862 checkpoint with forkhead and ring finger domains
isoform 2 [Homo sapiens]
Length = 663
Score = 46.2 bits (108), Expect = 1e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 546 VSSEASELDKKEKGI-CVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
V + A + DK E+ + C+IC D + + L C H FCA C + M +CPTC+
Sbjct: 288 VRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCR 343
>gi|239048792 checkpoint with forkhead and ring finger domains
isoform 1 [Homo sapiens]
Length = 664
Score = 46.2 bits (108), Expect = 1e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 546 VSSEASELDKKEKGI-CVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
V + A + DK E+ + C+IC D + + L C H FCA C + M +CPTC+
Sbjct: 288 VRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCR 343
>gi|239048907 checkpoint with forkhead and ring finger domains
isoform 4 [Homo sapiens]
Length = 623
Score = 46.2 bits (108), Expect = 1e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 546 VSSEASELDKKEKGI-CVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
V + A + DK E+ + C+IC D + + L C H FCA C + M +CPTC+
Sbjct: 247 VRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCR 302
>gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Homo
sapiens]
Length = 1801
Score = 45.8 bits (107), Expect = 1e-04
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 25 KLESYFQSSKSSGGGECTVSTQEHEAPGTFRVEFSERAAKERVLKKGEHQIL 76
KL+ YFQS K SGGGEC V Q+ +P F V F +++VL++ H+++
Sbjct: 26 KLQMYFQSPKRSGGGECEV-RQDPRSPSRFLVFFYPEDVRQKVLERKNHELV 76
>gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo
sapiens]
Length = 731
Score = 45.1 bits (105), Expect = 2e-04
Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 17/107 (15%)
Query: 493 TGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASE 552
TGL H A+ GG SSL K +P G ++S
Sbjct: 84 TGLSRHSCAARPSAGVGGSSSSLGSGSRKR-------------PLLAPLCNGLINSYE-- 128
Query: 553 LDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTC 599
DK +C IC D I + + KC H FC CI++++ CP C
Sbjct: 129 -DKSNDFVCPICFDMIE-EAYMTKCGHSFCYKCIHQSLEDNNRCPKC 173
>gi|50233824 ring finger and WD repeat domain 2 isoform d24 [Homo
sapiens]
Length = 707
Score = 45.1 bits (105), Expect = 2e-04
Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 17/107 (15%)
Query: 493 TGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASE 552
TGL H A+ GG SSL K +P G ++S
Sbjct: 84 TGLSRHSCAARPSAGVGGSSSSLGSGSRKR-------------PLLAPLCNGLINSYE-- 128
Query: 553 LDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTC 599
DK +C IC D I + + KC H FC CI++++ CP C
Sbjct: 129 -DKSNDFVCPICFDMIE-EAYMTKCGHSFCYKCIHQSLEDNNRCPKC 173
>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
Length = 771
Score = 45.1 bits (105), Expect = 2e-04
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 535 SKAASPPLKGS-VSSEASELDK-------KEKGICVICMDTISNKKVLPKCKHEFCAPCI 586
SK A PP + S ++SE + + K+ IC IC++ N KVLP C H FC C+
Sbjct: 16 SKTAGPPCQWSRMASEGTNIPSPVVRQIDKQFLICSICLERYKNPKVLP-CLHTFCERCL 74
Query: 587 NK---AMSYKPICPTC-QTSYGIQKG 608
A S CP C QTS +KG
Sbjct: 75 QNYIPAHSLTLSCPVCRQTSILPEKG 100
>gi|6005747 ring finger protein 2 [Homo sapiens]
Length = 336
Score = 43.9 bits (102), Expect = 5e-04
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 560 ICVICMDTISNKKVLPKCKHEFCAPCINKAM-SYKPICPTCQTSYGIQKGNQPEGSMVFT 618
+C IC+D + N +C H FCA CI A+ S CPTC+ ++ +P+ +
Sbjct: 50 MCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDAL 109
Query: 619 VSR 621
+S+
Sbjct: 110 ISK 112
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo
sapiens]
Length = 1758
Score = 43.5 bits (101), Expect = 7e-04
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 536 KAASPPLKGSVSSEASELDKK--EKGICVICMDTISNKKVLPKCKHEFCAPCINKAM--S 591
K PP S +SE D ++ +C+IC D +++ V+P C + +C CI A+ S
Sbjct: 232 KKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES 291
Query: 592 YKPICPTC 599
+ CPTC
Sbjct: 292 DEHTCPTC 299
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo
sapiens]
Length = 1792
Score = 43.5 bits (101), Expect = 7e-04
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 536 KAASPPLKGSVSSEASELDKK--EKGICVICMDTISNKKVLPKCKHEFCAPCINKAM--S 591
K PP S +SE D ++ +C+IC D +++ V+P C + +C CI A+ S
Sbjct: 232 KKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES 291
Query: 592 YKPICPTC 599
+ CPTC
Sbjct: 292 DEHTCPTC 299
>gi|46397375 ring finger protein 220 [Homo sapiens]
Length = 566
Score = 43.5 bits (101), Expect = 7e-04
Identities = 21/72 (29%), Positives = 32/72 (44%)
Query: 530 IDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKA 589
I D + LK V +L + ++ C+ICMD+ S +C H C C +
Sbjct: 483 ITEDSAVTTFEALKARVRELERQLSRGDRYKCLICMDSYSMPLTSIQCWHVHCEECWLRT 542
Query: 590 MSYKPICPTCQT 601
+ K +CP C T
Sbjct: 543 LGAKKLCPQCNT 554
>gi|165932346 ring finger protein 180 isoform 1 [Homo sapiens]
Length = 592
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 545 SVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPI---CPTCQT 601
S + ++K+ IC +C+D N + C H FC PC+ P CP C+T
Sbjct: 416 STDEDNEYAEEKDSYICAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRT 475
>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
Length = 744
Score = 40.4 bits (93), Expect = 0.006
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 560 ICVICMDTISNKKVLPKCKHEFCAPCINK---AMSYKPICPTC-QTSYGIQKG 608
IC IC++ N KVLP C H FC C+ A S CP C QTS +KG
Sbjct: 22 ICSICLERYKNPKVLP-CLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKG 73
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 40.0 bits (92), Expect = 0.008
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 555 KKEKGICVICMDTISNK---KVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
+ E+ +CV+CM ++ +VLP C HEF A C++K + CP C+
Sbjct: 374 QSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 40.0 bits (92), Expect = 0.008
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 555 KKEKGICVICMDTISNK---KVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
+ E+ +CV+CM ++ +VLP C HEF A C++K + CP C+
Sbjct: 374 QSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 40.0 bits (92), Expect = 0.008
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 555 KKEKGICVICMDTISNK---KVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
+ E+ +CV+CM ++ +VLP C HEF A C++K + CP C+
Sbjct: 407 QSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 40.0 bits (92), Expect = 0.008
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 555 KKEKGICVICMDTISNK---KVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
+ E+ +CV+CM ++ +VLP C HEF A C++K + CP C+
Sbjct: 374 QSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 421
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,985,052
Number of Sequences: 37866
Number of extensions: 1323333
Number of successful extensions: 4584
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 145
Number of HSP's that attempted gapping in prelim test: 4451
Number of HSP's gapped (non-prelim): 257
length of query: 740
length of database: 18,247,518
effective HSP length: 110
effective length of query: 630
effective length of database: 14,082,258
effective search space: 8871822540
effective search space used: 8871822540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.