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Search of human proteins with 19923646
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923646 family with sequence similarity 126, member A [Homo
sapiens]
(521 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923646 family with sequence similarity 126, member A [Homo ... 1038 0.0
gi|28376658 hypothetical protein LOC285172 [Homo sapiens] 509 e-144
gi|59814411 hypothetical protein LOC253725 [Homo sapiens] 39 0.012
gi|54124343 hypothetical protein LOC387680 [Homo sapiens] 39 0.015
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 38 0.026
gi|60097902 filaggrin [Homo sapiens] 35 0.13
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens] 35 0.13
gi|50301232 synaptopodin 2-like isoform b [Homo sapiens] 35 0.13
gi|154090959 hypothetical protein LOC55747 [Homo sapiens] 35 0.13
gi|169167062 PREDICTED: hypothetical protein LOC285556 [Homo sap... 35 0.17
gi|113416182 PREDICTED: hypothetical protein LOC285556 [Homo sap... 35 0.17
gi|113415686 PREDICTED: hypothetical protein LOC285556 [Homo sap... 35 0.17
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 34 0.37
gi|22094987 raptor isoform 1 [Homo sapiens] 33 0.63
gi|251823858 raptor isoform 2 [Homo sapiens] 33 0.63
gi|161016767 mucin 21 [Homo sapiens] 33 0.63
gi|44955929 calmodulin regulated spectrin-associated protein 1-l... 32 1.1
gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens] 32 1.8
gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens] 32 1.8
gi|32528306 replication factor C large subunit [Homo sapiens] 31 3.1
gi|239743602 PREDICTED: hypothetical protein XP_002342903 [Homo ... 31 3.1
gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo ... 31 3.1
gi|239743598 PREDICTED: hypothetical protein XP_002342901 [Homo ... 31 3.1
gi|239743596 PREDICTED: hypothetical protein XP_002342900 [Homo ... 31 3.1
gi|239743594 PREDICTED: hypothetical protein XP_002342913, parti... 31 3.1
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 31 3.1
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 31 3.1
gi|4502629 cyclin T2 isoform a [Homo sapiens] 31 3.1
gi|162951881 tousled-like kinase 2 isoform B [Homo sapiens] 31 3.1
gi|45643117 tousled-like kinase 2 isoform A [Homo sapiens] 31 3.1
>gi|19923646 family with sequence similarity 126, member A [Homo
sapiens]
Length = 521
Score = 1038 bits (2685), Expect = 0.0
Identities = 521/521 (100%), Positives = 521/521 (100%)
Query: 1 MFTSEKGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQL 60
MFTSEKGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQL
Sbjct: 1 MFTSEKGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQL 60
Query: 61 FEFYRSGEEQLLQFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHT 120
FEFYRSGEEQLLQFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHT
Sbjct: 61 FEFYRSGEEQLLQFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHT 120
Query: 121 KVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEV 180
KVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEV
Sbjct: 121 KVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEV 180
Query: 181 LTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYKGISSRIPVSSGFMVQM 240
LTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYKGISSRIPVSSGFMVQM
Sbjct: 181 LTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYKGISSRIPVSSGFMVQM 240
Query: 241 LTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPHGPMKSNKEGTRC 300
LTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPHGPMKSNKEGTRC
Sbjct: 241 LTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPHGPMKSNKEGTRC 300
Query: 301 IQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTS 360
IQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTS
Sbjct: 301 IQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTS 360
Query: 361 QSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQTQRAQSENLEL 420
QSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQTQRAQSENLEL
Sbjct: 361 QSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQTQRAQSENLEL 420
Query: 421 LSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVPHNPSSAVGCGAGTDANR 480
LSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVPHNPSSAVGCGAGTDANR
Sbjct: 421 LSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVPHNPSSAVGCGAGTDANR 480
Query: 481 FSACSLQEEKLIYVSERTELPMKHQSGQQRPPSISITLSTD 521
FSACSLQEEKLIYVSERTELPMKHQSGQQRPPSISITLSTD
Sbjct: 481 FSACSLQEEKLIYVSERTELPMKHQSGQQRPPSISITLSTD 521
>gi|28376658 hypothetical protein LOC285172 [Homo sapiens]
Length = 530
Score = 509 bits (1312), Expect = e-144
Identities = 278/537 (51%), Positives = 365/537 (67%), Gaps = 30/537 (5%)
Query: 1 MFTSEKGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQL 60
M +++ VVEEWLSEFK LP+T + +YA L K +LV +LYKVIQ+ +ELLEPVCHQL
Sbjct: 1 MLGTDRCVVEEWLSEFKALPDTQITSYAATLHRKKTLVPALYKVIQDSNNELLEPVCHQL 60
Query: 61 FEFYRSGEEQLLQFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHT 120
FE YRS E +L +FTLQFLPEL+W YL ++ SR+ S+GCIEALLLG+YNLEI DK G+
Sbjct: 61 FELYRSSEVRLKRFTLQFLPELMWVYLRLTVSRDRQSNGCIEALLLGIYNLEIADKDGNN 120
Query: 121 KVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEV 180
KVLSFTIPSLSKPS+YHEPS+IGSMALTE AL QH L +VVYS HPQRE TAQNRFEV
Sbjct: 121 KVLSFTIPSLSKPSIYHEPSTIGSMALTEGALCQHDLIRVVYSDLHPQRETFTAQNRFEV 180
Query: 181 LTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYKGISSRIPVSSGFMVQM 240
L+FL+LCYN+A+ YMP+ S QSLC++ SR+CV G+PRQH + +K + RI + FMVQ+
Sbjct: 181 LSFLMLCYNSAIVYMPASSYQSLCRMGSRVCVSGFPRQHEKHWKELCGRIVLDPEFMVQL 240
Query: 241 LTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPHGPMKSNKEGTRC 300
LTG+Y+A YNG+WDL Q+ LDDIIYRAQLEL+ +PLLVANA+K SLP S +EG +
Sbjct: 241 LTGVYYAMYNGQWDLGQEVLDDIIYRAQLELFSQPLLVANAMKNSLPFDAPDSTQEGQKV 300
Query: 301 IQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTS 360
++VE+TPT RISR A+T+ SIR HRW+R G + G EE + +++ DEGF S A+ S+
Sbjct: 301 LKVEVTPTVPRISRTAITTASIRRHRWRREGAEGVNGGEESVNLNDADEGFSSGASLSSQ 360
Query: 361 QSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKET-----TGESCKDHFARKQTQRAQS 415
G SS S + R + K+KET + ES +D RKQ + +
Sbjct: 361 PIGTKPSS-------SSQRGSLRKVATGRSAKDKETASAIKSSESPRDSVVRKQYVQQPT 413
Query: 416 ----ENLELLSLKR-LTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVPHNPSSAV 470
+++EL +K+ L+L Q +PK +S L +TA+ SKSF+ V+G S+++
Sbjct: 414 DLSVDSVELTPMKKHLSLPAGQVVPKINSLSLIRTASASSSKSFDYVNG----SQASTSI 469
Query: 471 GCG-------AGTDANRFSACSLQEEKLIYVSERTEL--PMKHQSGQQRPPSISITL 518
G G A +ANR+S SLQE++L E EL P + Q R PS ++ L
Sbjct: 470 GVGTEGGTNLAANNANRYSTVSLQEDRLGQAGEGKELLSPGAPLTKQSRSPSFNMQL 526
>gi|59814411 hypothetical protein LOC253725 [Homo sapiens]
Length = 1318
Score = 38.9 bits (89), Expect = 0.012
Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 6/164 (3%)
Query: 336 TGQEELMEISEVDEGFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKE 395
T + L+ +VD G + TS + S P + + ++ G K +
Sbjct: 682 TQRVSLLFEDDVDSGGSLFGSPPTSVPPATKKKETVSEAPPLLFSDEEEKEAQLGVKSVD 741
Query: 396 TTGESCKDHFARKQTQRAQSENLELLS------LKRLTLTTSQSLPKPSSHGLAKTAATV 449
ES K+ +T A+SE LL+ +K L +S S + KT ++
Sbjct: 742 KKVESAKESLKFGRTDVAESEKEGLLTRSAQETVKHSDLFSSSSPWDKGTKPRTKTVLSL 801
Query: 450 FSKSFEQVSGVTVPHNPSSAVGCGAGTDANRFSACSLQEEKLIY 493
F + +++ + P VG G DA+ S Q+E+L++
Sbjct: 802 FDEEEDKMEDQNIIQAPQKEVGKGCDPDAHPKSTGVFQDEELLF 845
>gi|54124343 hypothetical protein LOC387680 [Homo sapiens]
Length = 1341
Score = 38.5 bits (88), Expect = 0.015
Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 6/164 (3%)
Query: 336 TGQEELMEISEVDEGFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKE 395
T + L+ +VD G + TS + S P + + ++ G K +
Sbjct: 684 TQRVSLLFEDDVDSGGSLFGSPPTSVPPATKKKETVSEAPPLLFSDEEEKEAQLGVKSVD 743
Query: 396 TTGESCKDHFARKQTQRAQSENLELLS------LKRLTLTTSQSLPKPSSHGLAKTAATV 449
ES K+ +T A+SE LL+ +K L +S S + KT ++
Sbjct: 744 KKVESAKESLKFGRTDVAESEKEGLLTRSAQETVKHSDLFSSSSPWDKGTKPRTKTVLSL 803
Query: 450 FSKSFEQVSGVTVPHNPSSAVGCGAGTDANRFSACSLQEEKLIY 493
F + +++ + P VG G DA+ S Q+E+L++
Sbjct: 804 FDEEEDKMEDQNIIQAPQKEVGKGRDPDAHPKSTGVFQDEELLF 847
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 37.7 bits (86), Expect = 0.026
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 306 TPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTSQSGLS 365
+P SR T +R H WKR+ ++ + +S++ SR+ S S
Sbjct: 286 SPRRSRSGSQKRTHSRVRSHSWKRN-HSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQS 344
Query: 366 NS-----SHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQTQRAQS 415
+ SHN S PS ++H S++ KE++ G S RK++ R+QS
Sbjct: 345 RTPRRGRSHNWSRNPSKERSHSH---SRSSSKERDHRGSSS----PRKESGRSQS 392
Score = 30.8 bits (68), Expect = 3.1
Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 18/171 (10%)
Query: 306 TPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTSQSGLS 365
+P+ R R + + R R R + E +E S +E +SR+ S QSG S
Sbjct: 550 SPSEEREHRQSRSPSKERDRRRWRSPSKE---RERRQSRSSSEERDHSRSRSPNKQSGYS 606
Query: 366 -------NSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQTQRAQSENL 418
+H+ S PS NH + S+T KE + + + R +
Sbjct: 607 RPRASSKEKAHSRSRTPSKEGNHSQ---SRTSSKESDPS----QSTVPRSPDWKRSPTRT 659
Query: 419 ELLSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVPHNPSSA 469
LS R TS P G +T + S++ S T+P SS+
Sbjct: 660 SSLSQNRTPSKTSSHSPSTFPSG-GQTLSQDDSQADATTSKATLPGERSSS 709
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 35.4 bits (80), Expect = 0.13
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 8/145 (5%)
Query: 289 GPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVD 348
GP ++G+R Q SSR S + +IRGH R G + + E+ ++ S
Sbjct: 3728 GPSTGGRQGSRHEQAR---DSSRHSASQEGQDTIRGHPGSRRGGRQGSYHEQSVDRS--- 3781
Query: 349 EGFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETT-GESCKDHFAR 407
G S T+ G S++SH S S + R S G + + E+ +
Sbjct: 3782 -GHSGSHHSHTTSQGRSDASHGQSGSRSASRETRNEEQSGDGSRHSGSRHHEASTQADSS 3840
Query: 408 KQTQRAQSENLELLSLKRLTLTTSQ 432
+ +Q Q E+ +R + SQ
Sbjct: 3841 RHSQSGQGESAGSRRSRRQGSSVSQ 3865
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 288 HGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEV 347
HG + G + + SSR S + +IRGH G + + QE+ ++ S
Sbjct: 2104 HGQSAPSTGGRQGSHYDQAQDSSRHSASQEGQDTIRGHPGPSRGGRQGSHQEQSVDRSGH 2163
Query: 348 DEGFYS------RAASSTSQSGLSNSSHNCSNKPSIGKNHRRSG 385
+S R+ +S QSG ++S +K G R SG
Sbjct: 2164 SGSHHSHTTSQGRSDASRGQSGSRSASRKTYDKEQSGDGSRHSG 2207
Score = 32.0 bits (71), Expect = 1.4
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 289 GPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVD 348
GP ++G+R Q + SSR S + +IRGH G + E ++ S
Sbjct: 2756 GPSTRGRQGSRHEQAQ---DSSRHSASQDGQDTIRGHPGSSRGGRQGYHHEHSVDSSGHS 2812
Query: 349 EGFYS------RAASSTSQSGLSNSSHNCSNKPSIGKNHRRSG 385
+S R+ +S QSG ++S N+ G R SG
Sbjct: 2813 GSHHSHTTSQGRSDASRGQSGSRSASRTTRNEEQSGDGSRHSG 2855
Score = 31.6 bits (70), Expect = 1.8
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Query: 288 HGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEV 347
HG ++ G + + SSR S + +I GH G + + E+L++ S
Sbjct: 2428 HGRTGTSTGGRQGSHHKQARDSSRHSTSQEGQDTIHGHPGSSSGGRQGSHYEQLVDRS-- 2485
Query: 348 DEGFYSRAASSTSQSGLSNSSHNCSNKPSIG---KNHRRSGGSKTGGKEKETTGESCKDH 404
G S T+ G S++SH S S +N +SG + S D
Sbjct: 2486 --GHSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADS 2543
Query: 405 FARKQTQRAQSE 416
Q + QSE
Sbjct: 2544 SGHSQVGQGQSE 2555
Score = 30.4 bits (67), Expect = 4.1
Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 7/131 (5%)
Query: 288 HGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEV 347
HG ++ G + E SSR S + +IRGH G + + E+ + S
Sbjct: 482 HGRTGTSTGGRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRGGRQGSHHEQSVNRS-- 539
Query: 348 DEGFYSRAASSTSQSGLSNSSHNCSNKPSIG---KNHRRSGGSKTGGKEKETTGESCKDH 404
G S T+ G S++SH S S +N +SG + S D
Sbjct: 540 --GHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRNEEQSGDGTRHSGSRHHEASSQADS 597
Query: 405 FARKQTQRAQS 415
Q + QS
Sbjct: 598 SRHSQVGQGQS 608
Score = 30.4 bits (67), Expect = 4.1
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 16/137 (11%)
Query: 288 HGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEV 347
HG + G + + E SSR S + +IRGH G + + E+ ++ S
Sbjct: 1455 HGQTAPSTGGRQGSRHEQARNSSRHSASQDGQDTIRGHPGSSRGGRQGSYHEQSVDRSG- 1513
Query: 348 DEGFY-------SRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGG-----SKTGGKEKE 395
G++ R+ +S QSG ++S N+ G R SG S G +
Sbjct: 1514 HSGYHHSHTTPQGRSDASHGQSGPRSASRQTRNEEQSGDGSRHSGSRHHEPSTRAGSSRH 1573
Query: 396 T---TGESCKDHFARKQ 409
+ GES +R+Q
Sbjct: 1574 SQVGQGESAGSKTSRRQ 1590
Score = 29.6 bits (65), Expect = 7.0
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 288 HGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEV 347
HG +++ + E SSR S + +IR H R G + + E+ ++ S
Sbjct: 1131 HGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRAHPGSRRGGRQGSHHEQSVDRS-- 1188
Query: 348 DEGFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGK 392
G S T+ G S++SH S S + R+ S G +
Sbjct: 1189 --GHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRKDKQSGDGSR 1231
Score = 29.3 bits (64), Expect = 9.1
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 288 HGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEV 347
HG + G + + E SSR S + +IRGH G + + E+ ++ S
Sbjct: 1779 HGRTGPSTGGRQRSRHEQARDSSRHSASQEGQDTIRGHPGSSRGGRQGSHYEQSVDSSGH 1838
Query: 348 DEGFYSRAAS------STSQSGLSNSSHNCSNKPSIGKNHRRSG 385
+S S S QSG + S N+ G R SG
Sbjct: 1839 SGSHHSHTTSQERSDVSRGQSGSRSVSRQTRNEKQSGDGSRHSG 1882
>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
Length = 977
Score = 35.4 bits (80), Expect = 0.13
Identities = 48/179 (26%), Positives = 68/179 (37%), Gaps = 14/179 (7%)
Query: 285 SLPHGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRH-----GNTELTGQE 339
SL +K K R I +T + S+ V R R K++ G TG E
Sbjct: 264 SLQEKSIKEAKTKCRTIASLLTAAPNPHSKG-VLMFKKRRQRAKKYTLVSFGAAAGTGAE 322
Query: 340 ELMEI-----SEVDEGFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEK 394
E + SE+DE +S A S T+QS +S + G GS GG+
Sbjct: 323 EEDGVPPTSESELDEEAFSDARSLTNQSDW-DSPYLDMELARAGSRASEGQGSGLGGQLS 381
Query: 395 ETTGESCKDHFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKS 453
E +G + +Q QRA S EL ++ + + L P A A V S
Sbjct: 382 EVSGRGVQ--LFEQQRQRADSSTQELARVEPAAMLNGEGLQSPPRAQSAPPEAAVLPPS 438
>gi|50301232 synaptopodin 2-like isoform b [Homo sapiens]
Length = 753
Score = 35.4 bits (80), Expect = 0.13
Identities = 48/179 (26%), Positives = 68/179 (37%), Gaps = 14/179 (7%)
Query: 285 SLPHGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRH-----GNTELTGQE 339
SL +K K R I +T + S+ V R R K++ G TG E
Sbjct: 40 SLQEKSIKEAKTKCRTIASLLTAAPNPHSKG-VLMFKKRRQRAKKYTLVSFGAAAGTGAE 98
Query: 340 ELMEI-----SEVDEGFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEK 394
E + SE+DE +S A S T+QS +S + G GS GG+
Sbjct: 99 EEDGVPPTSESELDEEAFSDARSLTNQSDW-DSPYLDMELARAGSRASEGQGSGLGGQLS 157
Query: 395 ETTGESCKDHFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKS 453
E +G + +Q QRA S EL ++ + + L P A A V S
Sbjct: 158 EVSGRGVQ--LFEQQRQRADSSTQELARVEPAAMLNGEGLQSPPRAQSAPPEAAVLPPS 214
>gi|154090959 hypothetical protein LOC55747 [Homo sapiens]
Length = 1253
Score = 35.4 bits (80), Expect = 0.13
Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 6/164 (3%)
Query: 336 TGQEELMEISEVDEGFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKE 395
T + L+ +VD + TS + S P + + ++ G K +
Sbjct: 596 TQRVSLLFEDDVDSRGSLFGSPPTSVPPATKKKETVSEAPPLLFSDEEEKEAQLGVKSVD 655
Query: 396 TTGESCKDHFARKQTQRAQSENLELLS------LKRLTLTTSQSLPKPSSHGLAKTAATV 449
ES K+ +T A+SE LL+ +K L +S S + KT ++
Sbjct: 656 KKVESAKESLKFGRTDVAESEKEGLLTRSAQETVKHSDLFSSSSPWDKGTKPRTKTVLSL 715
Query: 450 FSKSFEQVSGVTVPHNPSSAVGCGAGTDANRFSACSLQEEKLIY 493
F + +++ + P VG G DA+ S Q+E+L++
Sbjct: 716 FDEEEDKMEDQNIIQAPQKEVGKGRDPDAHPKSTGVFQDEELLF 759
>gi|169167062 PREDICTED: hypothetical protein LOC285556 [Homo
sapiens]
Length = 1826
Score = 35.0 bits (79), Expect = 0.17
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 307 PTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTSQSGL-- 364
P SS++SR+ S S G + ++ + E +S++++ S A +TS S L
Sbjct: 280 PASSQLSRSQ-HSASEEGGNFSSSSSSSPMNKAEEDGLSKMEDSTTSTGALATSSSSLGF 338
Query: 365 ---SNSSHNCSNKPSIG-KNHRRSGGSKTGGKEKETTGESCKDHFARKQTQR 412
S S C G K GG K GG G C+D A+ Q R
Sbjct: 339 ESESGESEGCQAVGGEGEKISGGGGGGKGGGGGGAGDGTECRDIIAKSQGSR 390
>gi|113416182 PREDICTED: hypothetical protein LOC285556 [Homo
sapiens]
Length = 1826
Score = 35.0 bits (79), Expect = 0.17
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 307 PTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTSQSGL-- 364
P SS++SR+ S S G + ++ + E +S++++ S A +TS S L
Sbjct: 280 PASSQLSRSQ-HSASEEGGNFSSSSSSSPMNKAEEDGLSKMEDSTTSTGALATSSSSLGF 338
Query: 365 ---SNSSHNCSNKPSIG-KNHRRSGGSKTGGKEKETTGESCKDHFARKQTQR 412
S S C G K GG K GG G C+D A+ Q R
Sbjct: 339 ESESGESEGCQAVGGEGEKISGGGGGGKGGGGGGAGDGTECRDIIAKSQGSR 390
>gi|113415686 PREDICTED: hypothetical protein LOC285556 [Homo
sapiens]
Length = 1826
Score = 35.0 bits (79), Expect = 0.17
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 307 PTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTSQSGL-- 364
P SS++SR+ S S G + ++ + E +S++++ S A +TS S L
Sbjct: 280 PASSQLSRSQ-HSASEEGGNFSSSSSSSPMNKAEEDGLSKMEDSTTSTGALATSSSSLGF 338
Query: 365 ---SNSSHNCSNKPSIG-KNHRRSGGSKTGGKEKETTGESCKDHFARKQTQR 412
S S C G K GG K GG G C+D A+ Q R
Sbjct: 339 ESESGESEGCQAVGGEGEKISGGGGGGKGGGGGGAGDGTECRDIIAKSQGSR 390
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 33.9 bits (76), Expect = 0.37
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 349 EGFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRS-----GGSKTGGKEKETTGESCKD 403
+G +SS+S SG S+SS + S+ S + GG TGG+ +C
Sbjct: 2552 DGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGR-------NCSA 2604
Query: 404 HFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVP 463
+R + + S + S ++S S SS + ++++ S S S +
Sbjct: 2605 ASSRAASPASSSSSSSSSS------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2658
Query: 464 HNPSSAVGCGAGTDANRFSACSLQEE----KLIYVSERTELPMK--HQSGQQRPPSIS 515
+ SS+ + + + S+CS +E S + LP K Q+G+ RP + S
Sbjct: 2659 SSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHS 2716
>gi|22094987 raptor isoform 1 [Homo sapiens]
Length = 1335
Score = 33.1 bits (74), Expect = 0.63
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 19/118 (16%)
Query: 218 QHVRKYKGISSRIPVSSGFMVQMLTGIYF-AFYNGEW---------------DLAQKALD 261
+H+ ++ I SS + L G+ F + Y W D+A K L+
Sbjct: 776 EHILSFETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLN 835
Query: 262 DIIYRAQLELYPEPLLVANAIKASLPHGPMKSNKEGTRCIQVEITPTSSRISRNAVTS 319
I Y+A + P+ +L +++ S P P +G Q +P +S S +++T+
Sbjct: 836 SIAYKATVNARPQRVLDTSSLTQSAPASP---TNKGVHIHQAGGSPPASSTSSSSLTN 890
>gi|251823858 raptor isoform 2 [Homo sapiens]
Length = 1177
Score = 33.1 bits (74), Expect = 0.63
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 19/118 (16%)
Query: 218 QHVRKYKGISSRIPVSSGFMVQMLTGIYF-AFYNGEW---------------DLAQKALD 261
+H+ ++ I SS + L G+ F + Y W D+A K L+
Sbjct: 618 EHILSFETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLN 677
Query: 262 DIIYRAQLELYPEPLLVANAIKASLPHGPMKSNKEGTRCIQVEITPTSSRISRNAVTS 319
I Y+A + P+ +L +++ S P P +G Q +P +S S +++T+
Sbjct: 678 SIAYKATVNARPQRVLDTSSLTQSAPASP---TNKGVHIHQAGGSPPASSTSSSSLTN 732
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 33.1 bits (74), Expect = 0.63
Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 5/127 (3%)
Query: 350 GFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQ 409
G + + SST SG+S +++ S+ PS G N + S T T S +
Sbjct: 268 GTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGA 327
Query: 410 TQRAQSENLELLSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVPHNPSSA 469
+ SE+ S T T S+S S+ + AT S T ++ SS
Sbjct: 328 STATNSES-STTSSGASTATNSES----STTSSGASTATNSGSSTTSSGTSTATNSESST 382
Query: 470 VGCGAGT 476
V GA T
Sbjct: 383 VSSGAST 389
>gi|44955929 calmodulin regulated spectrin-associated protein 1-like
1 [Homo sapiens]
Length = 1478
Score = 32.3 bits (72), Expect = 1.1
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 31 LKDKSSLVSSLY--KVIQEPQSELLEPVCHQLFEFYRSGEEQLLQFTLQFLPELIWCYLA 88
LK+ SL SLY ++IQE E L CH E + L F+ EL W +
Sbjct: 266 LKETMSLADSLYNLQLIQEFCQEYLNQCCHFTLEDMLYAASSIKSNYLVFMAELFWWFEV 325
Query: 89 VSAS 92
V S
Sbjct: 326 VKPS 329
>gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens]
Length = 1290
Score = 31.6 bits (70), Expect = 1.8
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 355 AASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQTQRAQ 414
+ +S S+ G ++S + S K + G R+GGS+ ++ T+G KD KQ ++
Sbjct: 986 SCNSVSEGGFADSDSHSSFKTNEG-GEGRAGGSRMEAEKASTSGLGIKDEGDIKQAKKED 1044
Query: 415 SENLELLSL 423
+++ +S+
Sbjct: 1045 TDDRNKMSV 1053
>gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens]
Length = 1291
Score = 31.6 bits (70), Expect = 1.8
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 355 AASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQTQRAQ 414
+ +S S+ G ++S + S K + G R+GGS+ ++ T+G KD KQ ++
Sbjct: 986 SCNSVSEGGFADSDSHSSFKTNEG-GEGRAGGSRMEAEKASTSGLGIKDEGDIKQAKKED 1044
Query: 415 SENLELLSL 423
+++ +S+
Sbjct: 1045 TDDRNKMSV 1053
>gi|32528306 replication factor C large subunit [Homo sapiens]
Length = 1147
Score = 30.8 bits (68), Expect = 3.1
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 334 ELTGQEELMEISEVDEG---FYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTG 390
+++ Q+ + ISE DE +AAS + ++G S +SH +G ++ + T
Sbjct: 97 KISRQDPVTYISETDEEDDFMCKKAASKSKENGRSTNSH-------LGTSNMKKNEENTK 149
Query: 391 GKEK-----ETTGESCKDHFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPSSHGLAK 444
K K + T S D+F QR+ N ++++ KR L+ + + +AK
Sbjct: 150 TKNKPLSPIKLTPTSVLDYFGTGSVQRS---NKKMVASKRKELSQNTDESGLNDEAIAK 205
>gi|239743602 PREDICTED: hypothetical protein XP_002342903 [Homo
sapiens]
Length = 675
Score = 30.8 bits (68), Expect = 3.1
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 354 RAASSTSQSGLSNSSHNC-------SNKPSIGKNHRRSGGSKTG---GKEKETTGESCKD 403
R ++ + +++SS C + + + + +RS GSK G GK + +G +CK
Sbjct: 200 RISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKT 259
Query: 404 HFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPS 438
+ + +L LSLK+ + S P+
Sbjct: 260 TATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPT 294
>gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo
sapiens]
Length = 675
Score = 30.8 bits (68), Expect = 3.1
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 354 RAASSTSQSGLSNSSHNC-------SNKPSIGKNHRRSGGSKTG---GKEKETTGESCKD 403
R ++ + +++SS C + + + + +RS GSK G GK + +G +CK
Sbjct: 200 RISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKT 259
Query: 404 HFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPS 438
+ + +L LSLK+ + S P+
Sbjct: 260 TATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPT 294
>gi|239743598 PREDICTED: hypothetical protein XP_002342901 [Homo
sapiens]
Length = 675
Score = 30.8 bits (68), Expect = 3.1
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 354 RAASSTSQSGLSNSSHNC-------SNKPSIGKNHRRSGGSKTG---GKEKETTGESCKD 403
R ++ + +++SS C + + + + +RS GSK G GK + +G +CK
Sbjct: 200 RISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKT 259
Query: 404 HFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPS 438
+ + +L LSLK+ + S P+
Sbjct: 260 TATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPT 294
>gi|239743596 PREDICTED: hypothetical protein XP_002342900 [Homo
sapiens]
Length = 675
Score = 30.8 bits (68), Expect = 3.1
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 354 RAASSTSQSGLSNSSHNC-------SNKPSIGKNHRRSGGSKTG---GKEKETTGESCKD 403
R ++ + +++SS C + + + + +RS GSK G GK + +G +CK
Sbjct: 200 RISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKT 259
Query: 404 HFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPS 438
+ + +L LSLK+ + S P+
Sbjct: 260 TATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPT 294
>gi|239743594 PREDICTED: hypothetical protein XP_002342913, partial
[Homo sapiens]
Length = 552
Score = 30.8 bits (68), Expect = 3.1
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 354 RAASSTSQSGLSNSSHNC-------SNKPSIGKNHRRSGGSKTG---GKEKETTGESCKD 403
R ++ + +++SS C + + + + +RS GSK G GK + +G +CK
Sbjct: 77 RISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKT 136
Query: 404 HFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPS 438
+ + +L LSLK+ + S P+
Sbjct: 137 TATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPT 171
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 30.8 bits (68), Expect = 3.1
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 351 FYSRAASSTSQSGLSNSSHNCSNKPSIG-------KNHRRSGGSKTGGKEKETTGESCKD 403
F S S+ G+ N H G K R + S G +K+TT +D
Sbjct: 809 FDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERETFSSAEGTVDKDTTIMELRD 868
Query: 404 HFARKQTQRAQSENLELLSLKRLTLTT 430
+KQ A ++ ++ LS K + T+
Sbjct: 869 RLPKKQQASASTDGVDKLSGKEQSFTS 895
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 30.8 bits (68), Expect = 3.1
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 351 FYSRAASSTSQSGLSNSSHNCSNKPSIG-------KNHRRSGGSKTGGKEKETTGESCKD 403
F S S+ G+ N H G K R + S G +K+TT +D
Sbjct: 847 FDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERETFSSAEGTVDKDTTIMELRD 906
Query: 404 HFARKQTQRAQSENLELLSLKRLTLTT 430
+KQ A ++ ++ LS K + T+
Sbjct: 907 RLPKKQQASASTDGVDKLSGKEQSFTS 933
>gi|4502629 cyclin T2 isoform a [Homo sapiens]
Length = 663
Score = 30.8 bits (68), Expect = 3.1
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 349 EGFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKD 403
+G S ++SS + ++++SHN +K S K+ + SGG +T +ET E+ D
Sbjct: 608 DGISSSSSSSRKRLHVNDASHNHHSKMS--KSSKSSGGLRTSQHPRETGQEASGD 660
>gi|162951881 tousled-like kinase 2 isoform B [Homo sapiens]
Length = 718
Score = 30.8 bits (68), Expect = 3.1
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 351 FYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQT 410
F S +S S +G N+ H+CS++ I HR++ T EK + E+ K+ K+
Sbjct: 143 FVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLT--IEKISALENSKNSDLEKKE 200
Query: 411 QR 412
R
Sbjct: 201 GR 202
>gi|45643117 tousled-like kinase 2 isoform A [Homo sapiens]
Length = 750
Score = 30.8 bits (68), Expect = 3.1
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 351 FYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQT 410
F S +S S +G N+ H+CS++ I HR++ T EK + E+ K+ K+
Sbjct: 175 FVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLT--IEKISALENSKNSDLEKKE 232
Query: 411 QR 412
R
Sbjct: 233 GR 234
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,949,696
Number of Sequences: 37866
Number of extensions: 861304
Number of successful extensions: 2895
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 2826
Number of HSP's gapped (non-prelim): 100
length of query: 521
length of database: 18,247,518
effective HSP length: 107
effective length of query: 414
effective length of database: 14,195,856
effective search space: 5877084384
effective search space used: 5877084384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.