Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 19923584
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923584 modulator of apoptosis 1 [Homo sapiens]
(351 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923584 modulator of apoptosis 1 [Homo sapiens] 697 0.0
gi|52486265 paraneoplastic antigen MA1 [Homo sapiens] 380 e-105
gi|11464969 paraneoplastic antigen MA2 [Homo sapiens] 302 3e-82
gi|156766066 paraneoplastic antigen like 5 [Homo sapiens] 301 4e-82
gi|156766064 paraneoplastic antigen like 5 [Homo sapiens] 301 4e-82
gi|24308384 paraneoplastic antigen like 5 [Homo sapiens] 301 4e-82
gi|142976816 paraneoplastic cancer-testis-brain antigen [Homo sa... 296 1e-80
gi|239746974 PREDICTED: hypothetical protein XP_002343900 [Homo ... 251 7e-67
gi|187607308 paraneoplastic antigen like 6A [Homo sapiens] 251 7e-67
gi|239746972 PREDICTED: hypothetical protein XP_002343899 [Homo ... 247 1e-65
gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo ... 247 1e-65
gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [H... 157 1e-38
gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [H... 157 1e-38
gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [H... 157 1e-38
gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens] 151 1e-36
gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens] 151 1e-36
gi|156766054 PNMA-like 1 isoform b [Homo sapiens] 141 8e-34
gi|39780597 PNMA-like 1 isoform a [Homo sapiens] 141 8e-34
gi|28557790 zinc finger, CCHC domain containing 12 [Homo sapiens] 117 2e-26
gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens] 116 3e-26
gi|146219841 PNMA-like 2 [Homo sapiens] 97 2e-20
gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H... 91 2e-18
gi|169216749 PREDICTED: similar to Putative paraneoplastic antig... 91 2e-18
gi|199559779 coiled-coil domain containing 8 [Homo sapiens] 47 2e-05
gi|5174695 aldo-keto reductase family 1, member D1 [Homo sapiens] 38 0.012
gi|218505835 membrane-associated guanylate kinase-related 3 iso... 33 0.29
gi|155969695 membrane-associated guanylate kinase-related 3 iso... 33 0.29
gi|221554526 coiled-coil domain containing 42B [Homo sapiens] 30 2.5
gi|223555921 hepatocellular carcinoma related protein 1 isoform ... 30 3.2
gi|223555919 hepatocellular carcinoma related protein 1 isoform ... 30 3.2
>gi|19923584 modulator of apoptosis 1 [Homo sapiens]
Length = 351
Score = 697 bits (1799), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE
Sbjct: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL
Sbjct: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEEE 180
SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEEE
Sbjct: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEEE 180
Query: 181 FGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEEV 240
FGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEEV
Sbjct: 181 FGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEEV 240
Query: 241 FGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVIA 300
FGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVIA
Sbjct: 241 FGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVIA 300
Query: 301 GAVHKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAEEEEALLQAILEGNFT 351
GAVHKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAEEEEALLQAILEGNFT
Sbjct: 301 GAVHKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAEEEEALLQAILEGNFT 351
>gi|52486265 paraneoplastic antigen MA1 [Homo sapiens]
Length = 353
Score = 380 bits (976), Expect = e-105
Identities = 203/358 (56%), Positives = 260/358 (72%), Gaps = 13/358 (3%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M + LLEDWCRGMD+N ++ALL+ GI +C AEIEE LQA + P YR+LGRMF R+E
Sbjct: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
N K AL+ LT +A +P+E+PGKGG+W+V+FKPP D FL RL+ FLA EG TV ++
Sbjct: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALE-ALQPALQCLKYKKLRVFSGRESPEPGEE 179
+R LG +N + P PEM A ML L+ +QP ++ + YK+L +FSGR+ P PGEE
Sbjct: 120 ARVLGFQNPTPTPG----PEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEE 175
Query: 180 EFGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEE 239
F W+ HT ++++ WQV DVEKRRRL+ESLRGPA DVIR+LK NNP IT ECL+ALE+
Sbjct: 176 TFDPWLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQ 235
Query: 240 VFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVI 299
VFG ++ R+ Q+K+L TYQ EKLSAYV+RLEPLLQK+V++GAI++D VNQARL+QVI
Sbjct: 236 VFGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVI 295
Query: 300 AGAVHK-TIRRELNL--PEDGPAPGFLQLLVLIKDYEAAEEEE----ALLQAILEGNF 350
AGA H IRR+L L +GPAP QLLV I++ EA EEEE LLQ LEG+F
Sbjct: 296 AGANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEEEAEATLLQLGLEGHF 353
>gi|11464969 paraneoplastic antigen MA2 [Homo sapiens]
Length = 364
Score = 302 bits (773), Expect = 3e-82
Identities = 160/342 (46%), Positives = 223/342 (65%), Gaps = 5/342 (1%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M L LLEDWCR M ++ +K+L++ GI AEI+E LQ L LG YRLLG++FR+ E
Sbjct: 1 MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLKSLGRYRLLGKIFRKQE 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
N L+ L +T + +P E+ GKGG+W+VIFK P+ D FL RLN FL EG TV +
Sbjct: 61 NANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEFLERLNLFLEKEGQTVSGM 120
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEEE 180
RALG E S + PE+ A +L QA+ L ++Y+KLRVFSG P P EE
Sbjct: 121 FRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQPLLPMRYRKLRVFSGSAVPAPEEES 180
Query: 181 FGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEEV 240
F W+ T+++K W V + EK+R L ESLRGPALD++ +++ +NP I+V+ECL+A ++V
Sbjct: 181 FEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALDLMHIVQADNPSISVEECLEAFKQV 240
Query: 241 FGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVIA 300
FG ++ R QV+YL TYQ++ EK+SAYVLRLE LL++ V++ AI R +Q RL+QV+A
Sbjct: 241 FGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLLRRAVEKRAIPRRIADQVRLEQVMA 300
Query: 301 GAVHKTIR--RELNLPEDGPAPGFLQLLVLIKDYEAAEEEEA 340
GA + R L + GP P FL+L+ +I++ EEEEA
Sbjct: 301 GATLNQMLWCRLRELKDQGPPPSFLELMKVIRE---EEEEEA 339
>gi|156766066 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 301 bits (772), Expect = 4e-82
Identities = 163/348 (46%), Positives = 230/348 (66%), Gaps = 14/348 (4%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M L LLEDWC+GMDM+PRKALLI GI CS EI++ ++AGL PL YR+LGRMFRR++
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
N K + L ++ +P IPGKGG W V+ KP +PD+ FLSRLN FL EG ++ ++
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRSMTDV 120
Query: 121 SRALG---HENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPG 177
+RALG SLD E ++P++ +P L+P + + Y+KL+VFSG SP PG
Sbjct: 121 ARALGCCSLPAESLDAE--VMPQVRSP-------PLEPPKESMWYRKLKVFSGTASPSPG 171
Query: 178 EEEFGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQAL 237
EE F W+ T+++ WQV +VEKRRRLLESLRGPAL ++RVL+ NN ITV++CL AL
Sbjct: 172 EETFEDWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDAL 231
Query: 238 EEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQ 297
+++FG ++ R Q ++L T K EK+S ++LRLEPLLQK V + + + + RL
Sbjct: 232 KQIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKH 291
Query: 298 VIAG-AVHKTIRRELN-LPEDGPAPGFLQLLVLIKDYEAAEEEEALLQ 343
++A A+ +R +L L + G P FL+L+ LI+D E E EA+++
Sbjct: 292 LLARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMK 339
>gi|156766064 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 301 bits (772), Expect = 4e-82
Identities = 163/348 (46%), Positives = 230/348 (66%), Gaps = 14/348 (4%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M L LLEDWC+GMDM+PRKALLI GI CS EI++ ++AGL PL YR+LGRMFRR++
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
N K + L ++ +P IPGKGG W V+ KP +PD+ FLSRLN FL EG ++ ++
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRSMTDV 120
Query: 121 SRALG---HENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPG 177
+RALG SLD E ++P++ +P L+P + + Y+KL+VFSG SP PG
Sbjct: 121 ARALGCCSLPAESLDAE--VMPQVRSP-------PLEPPKESMWYRKLKVFSGTASPSPG 171
Query: 178 EEEFGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQAL 237
EE F W+ T+++ WQV +VEKRRRLLESLRGPAL ++RVL+ NN ITV++CL AL
Sbjct: 172 EETFEDWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDAL 231
Query: 238 EEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQ 297
+++FG ++ R Q ++L T K EK+S ++LRLEPLLQK V + + + + RL
Sbjct: 232 KQIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKH 291
Query: 298 VIAG-AVHKTIRRELN-LPEDGPAPGFLQLLVLIKDYEAAEEEEALLQ 343
++A A+ +R +L L + G P FL+L+ LI+D E E EA+++
Sbjct: 292 LLARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMK 339
>gi|24308384 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 301 bits (772), Expect = 4e-82
Identities = 163/348 (46%), Positives = 230/348 (66%), Gaps = 14/348 (4%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M L LLEDWC+GMDM+PRKALLI GI CS EI++ ++AGL PL YR+LGRMFRR++
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
N K + L ++ +P IPGKGG W V+ KP +PD+ FLSRLN FL EG ++ ++
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRSMTDV 120
Query: 121 SRALG---HENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPG 177
+RALG SLD E ++P++ +P L+P + + Y+KL+VFSG SP PG
Sbjct: 121 ARALGCCSLPAESLDAE--VMPQVRSP-------PLEPPKESMWYRKLKVFSGTASPSPG 171
Query: 178 EEEFGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQAL 237
EE F W+ T+++ WQV +VEKRRRLLESLRGPAL ++RVL+ NN ITV++CL AL
Sbjct: 172 EETFEDWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDAL 231
Query: 238 EEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQ 297
+++FG ++ R Q ++L T K EK+S ++LRLEPLLQK V + + + + RL
Sbjct: 232 KQIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKH 291
Query: 298 VIAG-AVHKTIRRELN-LPEDGPAPGFLQLLVLIKDYEAAEEEEALLQ 343
++A A+ +R +L L + G P FL+L+ LI+D E E EA+++
Sbjct: 292 LLARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMK 339
>gi|142976816 paraneoplastic cancer-testis-brain antigen [Homo
sapiens]
Length = 463
Score = 296 bits (759), Expect = 1e-80
Identities = 162/351 (46%), Positives = 222/351 (63%), Gaps = 5/351 (1%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M L LL+DWCRG +N R+ +LI GI + C E EE LQ LG YR++GRMFRR+E
Sbjct: 1 MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMFRREE 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
N + L+ L + +AL+P+EIPGKGG W VI KP + D FL+RLN FL E TV ++
Sbjct: 61 NAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRTVSDM 120
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQAL-EALQPALQCLKYKKLRVFSGRESPEPGEE 179
+R LG + P + PE W AQ L A+QP L+ + Y++LRVFSG PG
Sbjct: 121 NRVLGSDTNCSAPRVTISPEFWT--WAQTLGAAVQPLLEQMLYRELRVFSGNTISIPGAL 178
Query: 180 EFGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEE 239
F W+ HTT+M++ WQVP+ EKRRRL+E LRGPAL V+ L+ +N ITV+ECL AL++
Sbjct: 179 AFDAWLEHTTEMLQMWQVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAALQQ 238
Query: 240 VFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVI 299
VFG ++ + QVK YQ+ EK+S++VLRLEPLLQ+ V+ + R VNQ RL +V+
Sbjct: 239 VFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKRVL 298
Query: 300 AGA-VHKTIRRELNL-PEDGPAPGFLQLLVLIKDYEAAEEEEALLQAILEG 348
+GA + +R +L L + PGFL L+ L+++ E E + LEG
Sbjct: 299 SGATLPDKLRDKLKLMKQRRKPPGFLALVKLLREEEEWEATLGPDRESLEG 349
>gi|239746974 PREDICTED: hypothetical protein XP_002343900 [Homo
sapiens]
Length = 399
Score = 251 bits (641), Expect = 7e-67
Identities = 142/344 (41%), Positives = 209/344 (60%), Gaps = 23/344 (6%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M + +L+DWCR M +N R+ LLI GI + C AE +E+L+A L P+G + +LG++FR ++
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTF--LSRLNEFLAGEGMTVG 118
N ALV L E ++ALVP+EIPG GG W V+F P F L R+ F EG V
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 119 ELSRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGE 178
++ ALG G+ W + Q A+QP ++ ++Y+ L VFSGR+ P PGE
Sbjct: 121 SVAGALG---------VGLRRVCWLRSIGQ---AVQPWVEAVRYQSLGVFSGRDQPAPGE 168
Query: 179 EEFGRWMFHTTQMIKAWQ-VPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQAL 237
E F W+ HTT+M+ WQ V + E+RRRLLE LRG AL ++ L NP T +CL AL
Sbjct: 169 ESFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAAL 228
Query: 238 EEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQ 297
+VFG ++ ++VK LT Q+ E+LSA+VLRLE LLQK +++ A+ R + ++ RL Q
Sbjct: 229 AQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQ 288
Query: 298 VIAGA-----VHKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAE 336
++ A + + +R+ L G +P FL++L L+++ EA E
Sbjct: 289 MLTRAHLTEPLDEALRK---LRMAGRSPSFLEMLGLVRESEAWE 329
>gi|187607308 paraneoplastic antigen like 6A [Homo sapiens]
Length = 399
Score = 251 bits (641), Expect = 7e-67
Identities = 142/344 (41%), Positives = 209/344 (60%), Gaps = 23/344 (6%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M + +L+DWCR M +N R+ LLI GI + C AE +E+L+A L P+G + +LG++FR ++
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTF--LSRLNEFLAGEGMTVG 118
N ALV L E ++ALVP+EIPG GG W V+F P F L R+ F EG V
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 119 ELSRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGE 178
++ ALG G+ W + Q A+QP ++ ++Y+ L VFSGR+ P PGE
Sbjct: 121 SVAGALG---------VGLRRVCWLRSIGQ---AVQPWVEAVRYQSLGVFSGRDQPAPGE 168
Query: 179 EEFGRWMFHTTQMIKAWQ-VPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQAL 237
E F W+ HTT+M+ WQ V + E+RRRLLE LRG AL ++ L NP T +CL AL
Sbjct: 169 ESFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAAL 228
Query: 238 EEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQ 297
+VFG ++ ++VK LT Q+ E+LSA+VLRLE LLQK +++ A+ R + ++ RL Q
Sbjct: 229 AQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQ 288
Query: 298 VIAGA-----VHKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAE 336
++ A + + +R+ L G +P FL++L L+++ EA E
Sbjct: 289 MLTRAHLTEPLDEALRK---LRMAGRSPSFLEMLGLVRESEAWE 329
>gi|239746972 PREDICTED: hypothetical protein XP_002343899 [Homo
sapiens]
Length = 399
Score = 247 bits (630), Expect = 1e-65
Identities = 141/344 (40%), Positives = 207/344 (60%), Gaps = 23/344 (6%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M + +L+DWCR M +N R+ LLI GI + C AE +E+L+A L P+G + +LG+ FR ++
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTF--LSRLNEFLAGEGMTVG 118
N ALV L E ++ALVP+EIPG GG W V+F P F L R+ F EG V
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 119 ELSRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGE 178
++ ALG G+ W + Q A+QP ++ ++ + L VFSGR+ P PGE
Sbjct: 121 SVAGALG---------VGLRRVCWLRSIGQ---AVQPWVEAVRCQSLGVFSGRDQPAPGE 168
Query: 179 EEFGRWMFHTTQMIKAWQ-VPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQAL 237
E F W+ HTT+M+ WQ V + E+RRRLLE LRG AL ++ L NP T +CL AL
Sbjct: 169 ESFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAAL 228
Query: 238 EEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQ 297
+VFG ++ ++VK LT Q+ E+LSA+VLRLE LLQK +++ A+ R + ++ RL Q
Sbjct: 229 AQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQ 288
Query: 298 VIAGA-----VHKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAE 336
++ A + + +R+ L G +P FL++L L+++ EA E
Sbjct: 289 MLTRAHLTEPLDEALRK---LRMAGRSPSFLEMLGLVRESEAWE 329
>gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo
sapiens]
Length = 399
Score = 247 bits (630), Expect = 1e-65
Identities = 141/344 (40%), Positives = 207/344 (60%), Gaps = 23/344 (6%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M + +L+DWCR M +N R+ LLI GI + C AE +E+L+A L P+G + +LG+ FR ++
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTF--LSRLNEFLAGEGMTVG 118
N ALV L E ++ALVP+EIPG GG W V+F P F L R+ F EG V
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 119 ELSRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGE 178
++ ALG G+ W + Q A+QP ++ ++ + L VFSGR+ P PGE
Sbjct: 121 SVAGALG---------VGLRRVCWLRSIGQ---AVQPWVEAVRCQSLGVFSGRDQPAPGE 168
Query: 179 EEFGRWMFHTTQMIKAWQ-VPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQAL 237
E F W+ HTT+M+ WQ V + E+RRRLLE LRG AL ++ L NP T +CL AL
Sbjct: 169 ESFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAAL 228
Query: 238 EEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQ 297
+VFG ++ ++VK LT Q+ E+LSA+VLRLE LLQK +++ A+ R + ++ RL Q
Sbjct: 229 AQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQ 288
Query: 298 VIAGA-----VHKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAE 336
++ A + + +R+ L G +P FL++L L+++ EA E
Sbjct: 289 MLTRAHLTEPLDEALRK---LRMAGRSPSFLEMLGLVRESEAWE 329
>gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 157 bits (398), Expect = 1e-38
Identities = 111/340 (32%), Positives = 168/340 (49%), Gaps = 64/340 (18%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
+ L +L+DWCR M +N ++LLI I C E +EA++A L+PLG YR+L ++FR++
Sbjct: 191 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 250
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
+ ALV EF EG+ +
Sbjct: 251 GARAALV----------------------------------------EF--AEGLNQSLI 268
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEEE 180
R + + G W + + L+P ++ + Y++LR FSGRE P EE
Sbjct: 269 PRQIAGKGGP-----------WK--VISLPQTLRPLVKTMAYRELRPFSGREQPGCVEES 315
Query: 181 FGRWMFHTTQMIKAW-QVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEE 239
F W+ M++ W + E+RRRLL+SL G ALD++ L +P + +CL AL +
Sbjct: 316 FESWLEDAKDMLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQ 375
Query: 240 VFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVI 299
VF D ++K+LT Q +E L A+V+RLE LLQK V++GA+ N RL QV+
Sbjct: 376 VFRSRDTWMTSRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVL 435
Query: 300 -----AGAVHKTIRRELNLPEDGPAPGFLQLLVLIKDYEA 334
+ A+ T+RR + + P FL+LL LI+D EA
Sbjct: 436 SRARPSEALQDTLRR---MQLERRPPDFLRLLRLIRDMEA 472
>gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 541
Score = 157 bits (398), Expect = 1e-38
Identities = 111/340 (32%), Positives = 168/340 (49%), Gaps = 64/340 (18%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
+ L +L+DWCR M +N ++LLI I C E +EA++A L+PLG YR+L ++FR++
Sbjct: 131 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 190
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
+ ALV EF EG+ +
Sbjct: 191 GARAALV----------------------------------------EF--AEGLNQSLI 208
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEEE 180
R + + G W + + L+P ++ + Y++LR FSGRE P EE
Sbjct: 209 PRQIAGKGGP-----------WK--VISLPQTLRPLVKTMAYRELRPFSGREQPGCVEES 255
Query: 181 FGRWMFHTTQMIKAW-QVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEE 239
F W+ M++ W + E+RRRLL+SL G ALD++ L +P + +CL AL +
Sbjct: 256 FESWLEDAKDMLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQ 315
Query: 240 VFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVI 299
VF D ++K+LT Q +E L A+V+RLE LLQK V++GA+ N RL QV+
Sbjct: 316 VFRSRDTWMTSRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVL 375
Query: 300 -----AGAVHKTIRRELNLPEDGPAPGFLQLLVLIKDYEA 334
+ A+ T+RR + + P FL+LL LI+D EA
Sbjct: 376 SRARPSEALQDTLRR---MQLERRPPDFLRLLRLIRDMEA 412
>gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 157 bits (398), Expect = 1e-38
Identities = 111/340 (32%), Positives = 168/340 (49%), Gaps = 64/340 (18%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
+ L +L+DWCR M +N ++LLI I C E +EA++A L+PLG YR+L ++FR++
Sbjct: 191 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 250
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
+ ALV EF EG+ +
Sbjct: 251 GARAALV----------------------------------------EF--AEGLNQSLI 268
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEEE 180
R + + G W + + L+P ++ + Y++LR FSGRE P EE
Sbjct: 269 PRQIAGKGGP-----------WK--VISLPQTLRPLVKTMAYRELRPFSGREQPGCVEES 315
Query: 181 FGRWMFHTTQMIKAW-QVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEE 239
F W+ M++ W + E+RRRLL+SL G ALD++ L +P + +CL AL +
Sbjct: 316 FESWLEDAKDMLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQ 375
Query: 240 VFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVI 299
VF D ++K+LT Q +E L A+V+RLE LLQK V++GA+ N RL QV+
Sbjct: 376 VFRSRDTWMTSRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVL 435
Query: 300 -----AGAVHKTIRRELNLPEDGPAPGFLQLLVLIKDYEA 334
+ A+ T+RR + + P FL+LL LI+D EA
Sbjct: 436 SRARPSEALQDTLRR---MQLERRPPDFLRLLRLIRDMEA 472
>gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 151 bits (381), Expect = 1e-36
Identities = 116/340 (34%), Positives = 161/340 (47%), Gaps = 67/340 (19%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M L +L DWCR M N ++LLI GI C E +EA++A L+PLG YR+L + FR++
Sbjct: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
K A L E+L
Sbjct: 61 GAKAA-------------------------------------LVEFAEYL---------- 73
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEEE 180
N SL P Q IP P L QP L+ Y++LR FS RE P EE
Sbjct: 74 -------NRSLIPHQ--IPGNGGPWKVIFLP--QPVLENRAYRELRPFSRREQPGCEEES 122
Query: 181 FGRWMFHTTQMIKAW-QVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEE 239
F W+ H M++ W + EK+R LLESL GPAL+V+ L + ++ +CL AL +
Sbjct: 123 FESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQ 182
Query: 240 VFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVI 299
VF D ++K+LT Q +E L A+V+RLE LLQ+ V++GA+ N RL QV+
Sbjct: 183 VFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVL 242
Query: 300 -----AGAVHKTIRRELNLPEDGPAPGFLQLLVLIKDYEA 334
+ A+ T+R + + PGFL LL LI++ EA
Sbjct: 243 SWARPSEALQDTLR---GMQLEKRPPGFLGLLRLIREMEA 279
>gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 151 bits (381), Expect = 1e-36
Identities = 116/340 (34%), Positives = 161/340 (47%), Gaps = 67/340 (19%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M L +L DWCR M N ++LLI GI C E +EA++A L+PLG YR+L + FR++
Sbjct: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
K A L E+L
Sbjct: 61 GAKAA-------------------------------------LVEFAEYL---------- 73
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEEE 180
N SL P Q IP P L QP L+ Y++LR FS RE P EE
Sbjct: 74 -------NRSLIPHQ--IPGNGGPWKVIFLP--QPVLENRAYRELRPFSRREQPGCEEES 122
Query: 181 FGRWMFHTTQMIKAW-QVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEE 239
F W+ H M++ W + EK+R LLESL GPAL+V+ L + ++ +CL AL +
Sbjct: 123 FESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQ 182
Query: 240 VFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVI 299
VF D ++K+LT Q +E L A+V+RLE LLQ+ V++GA+ N RL QV+
Sbjct: 183 VFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVL 242
Query: 300 -----AGAVHKTIRRELNLPEDGPAPGFLQLLVLIKDYEA 334
+ A+ T+R + + PGFL LL LI++ EA
Sbjct: 243 SWARPSEALQDTLR---GMQLEKRPPGFLGLLRLIREMEA 279
>gi|156766054 PNMA-like 1 isoform b [Homo sapiens]
Length = 378
Score = 141 bits (356), Expect = 8e-34
Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 2/194 (1%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M + LLEDWCRGM+++ ++LL+ GI + C AEIEE L L+PLG YR+L ++F R+E
Sbjct: 5 MAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREE 64
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
N K AL+ + + + +P+E PG+GG+WRV+ + P D FL LNEFL EG T ++
Sbjct: 65 NVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRTWEDV 124
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGE-E 179
R L + +L Q PE WA L L A+ + C+ ++R + E E E
Sbjct: 125 VRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMD-AEIRSREEARAQEAAEFE 183
Query: 180 EFGRWMFHTTQMIK 193
E W + +K
Sbjct: 184 EMAAWALAAGRKVK 197
>gi|39780597 PNMA-like 1 isoform a [Homo sapiens]
Length = 439
Score = 141 bits (356), Expect = 8e-34
Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 2/194 (1%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M + LLEDWCRGM+++ ++LL+ GI + C AEIEE L L+PLG YR+L ++F R+E
Sbjct: 5 MAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREE 64
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
N K AL+ + + + +P+E PG+GG+WRV+ + P D FL LNEFL EG T ++
Sbjct: 65 NVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRTWEDV 124
Query: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGE-E 179
R L + +L Q PE WA L L A+ + C+ ++R + E E E
Sbjct: 125 VRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMD-AEIRSREEARAQEAAEFE 183
Query: 180 EFGRWMFHTTQMIK 193
E W + +K
Sbjct: 184 EMAAWALAAGRKVK 197
>gi|28557790 zinc finger, CCHC domain containing 12 [Homo sapiens]
Length = 402
Score = 117 bits (292), Expect = 2e-26
Identities = 66/200 (33%), Positives = 112/200 (56%), Gaps = 8/200 (4%)
Query: 142 WAPMLAQAL-EALQPALQCLKYKKLRVFSGRESPEPGEEEFGRWMFHTTQMIKAWQVPDV 200
WA + ++L +L P + + + +++FSGR P GEE F W+ ++ W + +
Sbjct: 21 WAHSMLRSLGRSLGPIMASMADRNMKLFSGRVVPAQGEETFENWLTQVNGVLPDWNMSEE 80
Query: 201 EKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEEVFGVTDNPRELQVKYLTTYQK 260
EK +RL+++LRGPA +V+RVL+ NP ++V + L+A++ VFG +++ K+ T Q
Sbjct: 81 EKLKRLMKTLRGPAREVMRVLQATNPNLSVADFLRAMKLVFGESESSVTAHGKFFNTLQA 140
Query: 261 DEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQ-VIAGAVHKTIRRELN------L 313
EK S YV+RLE LQ +Q G I N+ RL Q ++ G + + +R L
Sbjct: 141 QGEKASLYVIRLEVQLQNAIQAGIIAEKDANRTRLQQLLLGGELSRDLRLRLKDFLRMYA 200
Query: 314 PEDGPAPGFLQLLVLIKDYE 333
E P FL+L+ ++++ E
Sbjct: 201 NEQERLPNFLELIRMVREEE 220
>gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens]
Length = 403
Score = 116 bits (290), Expect = 3e-26
Identities = 65/200 (32%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Query: 142 WAPMLAQAL-EALQPALQCLKYKKLRVFSGRESPEPGEEEFGRWMFHTTQMIKAWQVPDV 200
WA + ++L +L P + + + +++FSGR P G+E F W+ +++ W + +
Sbjct: 21 WAHSMLRSLGRSLCPLVVKMAERNMKLFSGRVVPAQGKETFENWLIQVNEVLPDWSMSEE 80
Query: 201 EKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEEVFGVTDNPRELQVKYLTTYQK 260
EK +RL+++LRGPA +V+R+L+ NP ++V + L+A++ VFG +++ K+ T Q
Sbjct: 81 EKLKRLMKTLRGPAREVMRLLQAANPNLSVADFLRAMKLVFGESESSVTAHGKFFNTLQA 140
Query: 261 DEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVIAGA-VHKTIRRELN------L 313
EK S YV+RLE LQ +Q G + NQ RL Q++ GA +++ +R L
Sbjct: 141 QGEKASLYVIRLEVQLQNAIQAGILAEKDANQTRLQQLLLGAELNRDLRFRLKHLLRMYA 200
Query: 314 PEDGPAPGFLQLLVLIKDYE 333
+ P FL+L+ +I++ E
Sbjct: 201 NKQERLPNFLELIKMIREEE 220
>gi|146219841 PNMA-like 2 [Homo sapiens]
Length = 635
Score = 97.4 bits (241), Expect = 2e-20
Identities = 45/116 (38%), Positives = 68/116 (58%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M + LL+DWCR +D++ +ALL+ GI + A++E LQ L PLG +RL +E
Sbjct: 1 MAMSLLQDWCRSLDVDAHRALLVTGIPEGLEQADVEAVLQPTLLPLGTFRLRHMKALMNE 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMT 116
+ ALV + +HA +P+EIPGK G+WRV++K D L ++ L +G T
Sbjct: 61 KAQAALVEFVEDVNHAAIPREIPGKDGVWRVLWKDRAQDTRVLRQMRRLLLDDGPT 116
>gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo
sapiens]
Length = 340
Score = 90.9 bits (224), Expect = 2e-18
Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M L +L DWCR M +N ++LLI I C E +EA++A L+PLG YR+L ++FR++
Sbjct: 1 MALAMLRDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEF-LAGEGMTVGE 119
+ ALV + +L+P++I GKGG W+VI P D F +E AGE G+
Sbjct: 61 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQALDAEFQDIPSEAGAAGEEEEAGD 120
Score = 72.0 bits (175), Expect = 7e-13
Identities = 55/159 (34%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 111 AGEGMTVGELSRALGHENGSLDPEQGMIPEMWAPMLAQALE-----ALQPALQCLKYKKL 165
AGE VGE A+G + E G + E + +A LQ L+ Y++L
Sbjct: 185 AGEAEAVGEAG-AVGEAGAA--GEAGAVGEARGTNVTRAWVQPRRCTLQAVLENRAYQEL 241
Query: 166 RVFSGRESPEPGEEEFGRWMFHTTQMIKAW-QVPDVEKRRRLLESLRGPALDVIRVLKIN 224
R FSGRE P EE F WM H M++ W + E++R LLESL GPALDV+ L
Sbjct: 242 RPFSGREQPGCEEESFESWMEHAKDMLQLWYHASERERKRWLLESLGGPALDVVSGLLEE 301
Query: 225 NPLITVDECLQALE-------EVFGVTDNPRELQVKYLT 256
+P + +C L+ + FG D ++K+LT
Sbjct: 302 DPNLAALDCQVLLDCWAAVLGQAFGNRDPRMTSRLKFLT 340
>gi|169216749 PREDICTED: similar to Putative paraneoplastic
antigen-like protein 6B-like protein [Homo sapiens]
Length = 340
Score = 90.9 bits (224), Expect = 2e-18
Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Query: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
M L +L DWCR M +N ++LLI I C E +EA++A L+PLG YR+L ++FR++
Sbjct: 1 MALAMLRDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 60
Query: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEF-LAGEGMTVGE 119
+ ALV + +L+P++I GKGG W+VI P D F +E AGE G+
Sbjct: 61 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQALDAEFQDIPSEAGAAGEEEEAGD 120
Score = 72.0 bits (175), Expect = 7e-13
Identities = 55/159 (34%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 111 AGEGMTVGELSRALGHENGSLDPEQGMIPEMWAPMLAQALE-----ALQPALQCLKYKKL 165
AGE VGE A+G + E G + E + +A LQ L+ Y++L
Sbjct: 185 AGEAEAVGEAG-AVGEAGAA--GEAGAVGEARGTNVTRAWVQPRRCTLQAVLENRAYQEL 241
Query: 166 RVFSGRESPEPGEEEFGRWMFHTTQMIKAW-QVPDVEKRRRLLESLRGPALDVIRVLKIN 224
R FSGRE P EE F WM H M++ W + E++R LLESL GPALDV+ L
Sbjct: 242 RPFSGREQPGCKEESFESWMEHAKDMLQLWYHASERERKRWLLESLGGPALDVVSGLLEE 301
Query: 225 NPLITVDECLQALE-------EVFGVTDNPRELQVKYLT 256
+P + +C L+ + FG D ++K+LT
Sbjct: 302 DPNLAALDCQVLLDCWAAVLGQAFGNRDPRMTSRLKFLT 340
>gi|199559779 coiled-coil domain containing 8 [Homo sapiens]
Length = 538
Score = 47.4 bits (111), Expect = 2e-05
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 72 ETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGELSRAL 124
+ + L+P+E+ GG+WRVI KP + F RL +FL EG T+ +++R +
Sbjct: 7 DVDYLLIPREVRLAGGVWRVISKPATKEAEFRERLTQFLEEEGRTLEDVARIM 59
>gi|5174695 aldo-keto reductase family 1, member D1 [Homo sapiens]
Length = 326
Score = 38.1 bits (87), Expect = 0.012
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 138 IPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEE-----EFGRWMFHTTQMI 192
+PEM P L + L LQ L Y L + + +PG+E E G+W++H + +
Sbjct: 94 VPEMVRPTLERTLRVLQ-----LDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLC 148
Query: 193 KAWQVPDVEKRRRLLESL 210
W+ + K L++SL
Sbjct: 149 ATWEAMEACKDAGLVKSL 166
>gi|218505835 membrane-associated guanylate kinase-related 3
isoform 1 [Homo sapiens]
Length = 1481
Score = 33.5 bits (75), Expect = 0.29
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 281 QRGAIERDAVNQARLDQVIAGAVH-KTIRRELNLPEDGPAPGFLQLLVLIKDYEAAEEEE 339
Q+G+I+ +L QVI ++ +TI P DG PG + ++ ++A EE
Sbjct: 122 QKGSIDH------KLQQVIRDNLYLRTIPCTTRAPRDGEVPGVDYNFISVEQFKALEESG 175
Query: 340 ALLQA-ILEGNF 350
ALL++ +GNF
Sbjct: 176 ALLESGTYDGNF 187
>gi|155969695 membrane-associated guanylate kinase-related 3
isoform 2 [Homo sapiens]
Length = 1125
Score = 33.5 bits (75), Expect = 0.29
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 281 QRGAIERDAVNQARLDQVIAGAVH-KTIRRELNLPEDGPAPGFLQLLVLIKDYEAAEEEE 339
Q+G+I+ +L QVI ++ +TI P DG PG + ++ ++A EE
Sbjct: 122 QKGSIDH------KLQQVIRDNLYLRTIPCTTRAPRDGEVPGVDYNFISVEQFKALEESG 175
Query: 340 ALLQA-ILEGNF 350
ALL++ +GNF
Sbjct: 176 ALLESGTYDGNF 187
>gi|221554526 coiled-coil domain containing 42B [Homo sapiens]
Length = 308
Score = 30.4 bits (67), Expect = 2.5
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 217 VIRVLKINNPLITVDECLQALEEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLL 276
V+R+L+ L+ D+ LQA +EVF L+ ++ QK+ E L +R + L
Sbjct: 32 VLRLLEKRQELVDADQALQAQKEVF--RTKTAALKQRWEQLEQKERE-LKGSFIRFDKFL 88
Query: 277 Q-------KLVQRGAIERDAVNQARLDQVIAGAVHKTIRRE 310
Q + ++R A ER + ++ + + +RRE
Sbjct: 89 QDSEARRNRALRRAAEERHQAGRREVEALRLWTQLQELRRE 129
>gi|223555921 hepatocellular carcinoma related protein 1 isoform 2
[Homo sapiens]
Length = 372
Score = 30.0 bits (66), Expect = 3.2
Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 32/165 (19%)
Query: 213 PALDVIRVLKINNPLITVDECLQALEEVFG--VTDNP------RELQVKYLTTYQKDEEK 264
P+ V+ L + P+ TVD + + FG + D P EL V LT + EE
Sbjct: 169 PSFGVLSNLPL--PIPTVDASIPTSQNGFGYKMPDVPDAFPELSELSVSQLTDMNEQEEV 226
Query: 265 LSAYVLRLEPLLQKLVQRGAIER----------------DAVNQARLDQV-----IAGAV 303
L L L L Q + + + + +A Q LD+ +
Sbjct: 227 LLEQFLTLPQLKQIITDKDDLVKSIEELARKNLLLEPSLEAKRQTVLDKYELLTQMKSTF 286
Query: 304 HKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAEEEEALLQAILEG 348
K ++R+ L E A LQ + + +EA EE + + + LEG
Sbjct: 287 EKKMQRQHELSESCSASA-LQARLKVAAHEAEEESDNIAEDFLEG 330
>gi|223555919 hepatocellular carcinoma related protein 1 isoform 1
[Homo sapiens]
Length = 397
Score = 30.0 bits (66), Expect = 3.2
Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 32/165 (19%)
Query: 213 PALDVIRVLKINNPLITVDECLQALEEVFG--VTDNP------RELQVKYLTTYQKDEEK 264
P+ V+ L + P+ TVD + + FG + D P EL V LT + EE
Sbjct: 194 PSFGVLSNLPL--PIPTVDASIPTSQNGFGYKMPDVPDAFPELSELSVSQLTDMNEQEEV 251
Query: 265 LSAYVLRLEPLLQKLVQRGAIER----------------DAVNQARLDQV-----IAGAV 303
L L L L Q + + + + +A Q LD+ +
Sbjct: 252 LLEQFLTLPQLKQIITDKDDLVKSIEELARKNLLLEPSLEAKRQTVLDKYELLTQMKSTF 311
Query: 304 HKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAEEEEALLQAILEG 348
K ++R+ L E A LQ + + +EA EE + + + LEG
Sbjct: 312 EKKMQRQHELSESCSASA-LQARLKVAAHEAEEESDNIAEDFLEG 355
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,018,017
Number of Sequences: 37866
Number of extensions: 630003
Number of successful extensions: 1561
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1495
Number of HSP's gapped (non-prelim): 48
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.