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Name: PNMA5 Sequence: fasta or formatted (448aa) NCBI GI: 156766066
Description:

paraneoplastic antigen like 5

Referenced in:

Additional Brain Proteins
Testes and Sperm

Other entries for this name:
alt mRNA [448aa] paraneoplastic antigen like 5
alt mRNA [448aa] paraneoplastic antigen like 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         35           2
 C cysteine            1.6          7           2
 D aspartate           4.7         21           2
 E glutamate           9.4         42           3
 F phenylalanine       2.9         13           1
 G glycine             6.9         31           2
 H histidine           1.1          5           1
 I isoleucine          3.1         14           1
 K lysine              5.8         26           1
 L leucine            10.7         48           2
 M methionine          3.3         15           1
 N asparagine          2.5         11           2
 P proline             7.4         33           2
 Q glutamine           4.5         20           1
 R arginine            7.8         35           3
 S serine              7.4         33           2
 T threonine           4.7         21           2
 V valine              5.8         26           3
 W tryptophan          1.6          7           1
 Y tyrosine            1.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   paraneoplastic antigen like 5 
PNMA5                 1.000   paraneoplastic antigen like 5 
PNMA5                 1.000   paraneoplastic antigen like 5 
PNMA3                 0.353   paraneoplastic cancer-testis-brain antigen 
PNMA1                 0.331   paraneoplastic antigen MA1 
PNMA2                 0.321   paraneoplastic antigen MA2 
MOAP1                 0.316   modulator of apoptosis 1 
LOC100287500          0.289   PREDICTED: hypothetical protein XP_002343900 
PNMA6A                0.289   paraneoplastic antigen like 6A 
LOC100287466          0.285   PREDICTED: hypothetical protein XP_002343899 
LOC100287428          0.285   PREDICTED: hypothetical protein XP_002343898 
LOC649201             0.197   PREDICTED: similar to paraneoplastic antigen MA1 [H...
LOC649201             0.197   PREDICTED: similar to paraneoplastic antigen MA1 [H...
LOC649201             0.197   PREDICTED: similar to paraneoplastic antigen MA1 [H...
LOC649238             0.184   PREDICTED: similar to hCG1645335 
LOC649238             0.184   PREDICTED: similar to hCG1645335 
ZCCHC18               0.137   zinc finger, CCHC domain containing 18 
ZCCHC12               0.137   zinc finger, CCHC domain containing 12 
PNMAL1                0.123   PNMA-like 1 isoform b 
PNMAL1                0.123   PNMA-like 1 isoform a 
LOC100128960          0.085   PREDICTED: similar to paraneoplastic antigen MA2 [H...
LOC100128960          0.085   PREDICTED: similar to Putative paraneoplastic antig...
PNMAL2                0.073   PNMA-like 2 
CCDC8                 0.033   coiled-coil domain containing 8 
TXLNB                 0.011   taxilin beta 
MAGI2                 0.011   membrane associated guanylate kinase, WW and PDZ dom...
LOC100291206          0.011   PREDICTED: hypothetical protein XP_002347014 
FBXO41                0.011   F-box protein 41 
LOC100293492          0.010   PREDICTED: hypothetical protein 
LOC729162             0.010   PREDICTED: similar to hCG1981372 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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