PNMAL1 6045

Name: PNMAL1	Sequence: fasta or formatted (378aa)		NCBI GI: 156766054
Description: PNMA-like 1 isoform b		Referenced in: Additional Brain Proteins Testes and Sperm
Other entries for this name: alt prot [439aa] PNMA-like 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 41 2 C cysteine 1.6 6 1 D aspartate 4.2 16 1 E glutamate 11.1 42 2 F phenylalanine 1.9 7 1 G glycine 6.9 26 2 H histidine 1.6 6 1 I isoleucine 3.2 12 2 K lysine 8.5 32 4 L leucine 7.4 28 2 M methionine 2.4 9 1 N asparagine 5.3 20 2 P proline 7.7 29 2 Q glutamine 3.4 13 1 R arginine 6.6 25 2 S serine 5.3 20 1 T threonine 2.9 11 1 V valine 6.3 24 2 W tryptophan 2.4 9 1 Y tyrosine 0.5 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PNMA-like 1 isoform b PNMAL1 0.962 PNMA-like 1 isoform a PNMA1 0.169 paraneoplastic antigen MA1 MOAP1 0.155 modulator of apoptosis 1 PNMA2 0.150 paraneoplastic antigen MA2 PNMA3 0.147 paraneoplastic cancer-testis-brain antigen PNMA5 0.143 paraneoplastic antigen like 5 PNMA5 0.143 paraneoplastic antigen like 5 PNMA5 0.143 paraneoplastic antigen like 5 PNMAL2 0.123 PNMA-like 2 LOC100287466 0.114 PREDICTED: hypothetical protein XP_002343899 LOC100287428 0.114 PREDICTED: hypothetical protein XP_002343898 LOC100287500 0.114 PREDICTED: hypothetical protein XP_002343900 PNMA6A 0.114 paraneoplastic antigen like 6A LOC100128960 0.113 PREDICTED: similar to paraneoplastic antigen MA2 [H... LOC100128960 0.113 PREDICTED: similar to Putative paraneoplastic antig... LOC649201 0.106 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649201 0.106 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649201 0.106 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649238 0.103 PREDICTED: similar to hCG1645335 LOC649238 0.103 PREDICTED: similar to hCG1645335 CCDC8 0.059 coiled-coil domain containing 8 NEFH 0.036 neurofilament, heavy polypeptide 200kDa PCLO 0.021 piccolo isoform 2 PCLO 0.021 piccolo isoform 1 SMTNL1 0.020 smoothelin-like 1 SRRM1 0.020 serine/arginine repetitive matrix 1 NOLC1 0.019 nucleolar and coiled-body phosphoprotein 1 FAM133A 0.017 hypothetical protein LOC286499 DHX16 0.017 DEAH (Asp-Glu-Ala-His) box polypeptide 16 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.