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Search of human proteins with 19923477
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923477 NEDD8 ultimate buster-1 [Homo sapiens]
(601 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923477 NEDD8 ultimate buster-1 [Homo sapiens] 1202 0.0
gi|45439327 periplakin [Homo sapiens] 42 0.002
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 39 0.010
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 39 0.014
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 39 0.014
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 39 0.014
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 39 0.014
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 39 0.014
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 39 0.014
gi|122937396 coiled-coil domain containing 150 [Homo sapiens] 39 0.014
gi|11342676 thyroid hormone receptor interactor 10 [Homo sapiens] 38 0.023
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 38 0.031
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 37 0.040
gi|18093112 ABT1-associated protein [Homo sapiens] 37 0.040
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ... 37 0.052
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 37 0.052
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 37 0.052
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 37 0.068
gi|10880975 hypothetical protein LOC57821 [Homo sapiens] 36 0.089
gi|219689136 coiled-coil domain containing 68 [Homo sapiens] 36 0.12
gi|13376818 coiled-coil domain containing 68 [Homo sapiens] 36 0.12
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 36 0.12
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 36 0.12
gi|21389505 janus kinase and microtubule interacting protein 1 i... 35 0.15
gi|150456473 janus kinase and microtubule interacting protein 1 ... 35 0.15
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 35 0.15
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 35 0.15
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 35 0.20
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 35 0.20
gi|13375952 TBC1 domain family, member 17 [Homo sapiens] 35 0.20
>gi|19923477 NEDD8 ultimate buster-1 [Homo sapiens]
Length = 601
Score = 1202 bits (3109), Expect = 0.0
Identities = 601/601 (100%), Positives = 601/601 (100%)
Query: 1 MAQKKYLQAKLTQFLREDRIQLWKPPYTDENKKVGLALKDLAKQYSDRLECCENEVEKVI 60
MAQKKYLQAKLTQFLREDRIQLWKPPYTDENKKVGLALKDLAKQYSDRLECCENEVEKVI
Sbjct: 1 MAQKKYLQAKLTQFLREDRIQLWKPPYTDENKKVGLALKDLAKQYSDRLECCENEVEKVI 60
Query: 61 EEIRCKAIERGTGNDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAETF 120
EEIRCKAIERGTGNDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAETF
Sbjct: 61 EEIRCKAIERGTGNDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAETF 120
Query: 121 GLQENYIKIVINKKQLQLGKTLEEQGVAHNVKAMVLELKQSEEDARKNFQLEEEEQNEAK 180
GLQENYIKIVINKKQLQLGKTLEEQGVAHNVKAMVLELKQSEEDARKNFQLEEEEQNEAK
Sbjct: 121 GLQENYIKIVINKKQLQLGKTLEEQGVAHNVKAMVLELKQSEEDARKNFQLEEEEQNEAK 180
Query: 181 LKEKQIQRTKRGLEILAKRAAETVVDPEMTPYLDIANQTGRSIRIPPSERKALMLAMGYH 240
LKEKQIQRTKRGLEILAKRAAETVVDPEMTPYLDIANQTGRSIRIPPSERKALMLAMGYH
Sbjct: 181 LKEKQIQRTKRGLEILAKRAAETVVDPEMTPYLDIANQTGRSIRIPPSERKALMLAMGYH 240
Query: 241 EKGRAFLKRKEYGIALPCLLDADKYFCECCRELLDTVDNYAVLQLDIVWCYFRLEQLECL 300
EKGRAFLKRKEYGIALPCLLDADKYFCECCRELLDTVDNYAVLQLDIVWCYFRLEQLECL
Sbjct: 241 EKGRAFLKRKEYGIALPCLLDADKYFCECCRELLDTVDNYAVLQLDIVWCYFRLEQLECL 300
Query: 301 DDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGKEKVLFLRLYLLQGIRNYHSGNDVEAY 360
DDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGKEKVLFLRLYLLQGIRNYHSGNDVEAY
Sbjct: 301 DDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGKEKVLFLRLYLLQGIRNYHSGNDVEAY 360
Query: 361 EYLNKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQ 420
EYLNKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQ
Sbjct: 361 EYLNKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQ 420
Query: 421 IRKEEKEKKRRRLENIRFLKGMGYSTHAAQQILLSNPQMWWLNDSNPETDNRQESPSQEN 480
IRKEEKEKKRRRLENIRFLKGMGYSTHAAQQILLSNPQMWWLNDSNPETDNRQESPSQEN
Sbjct: 421 IRKEEKEKKRRRLENIRFLKGMGYSTHAAQQILLSNPQMWWLNDSNPETDNRQESPSQEN 480
Query: 481 IDRLVYMGFDALVAEAALRVFRGNVQLAAQTLAHNGGSLPPELPLSPEDSLSPPATSPSD 540
IDRLVYMGFDALVAEAALRVFRGNVQLAAQTLAHNGGSLPPELPLSPEDSLSPPATSPSD
Sbjct: 481 IDRLVYMGFDALVAEAALRVFRGNVQLAAQTLAHNGGSLPPELPLSPEDSLSPPATSPSD 540
Query: 541 SAGTSSASTDEDMETEAVNEILEDIPEHEEDYLDSTLEDEEIIIAEYLSYVENRKSATKK 600
SAGTSSASTDEDMETEAVNEILEDIPEHEEDYLDSTLEDEEIIIAEYLSYVENRKSATKK
Sbjct: 541 SAGTSSASTDEDMETEAVNEILEDIPEHEEDYLDSTLEDEEIIIAEYLSYVENRKSATKK 600
Query: 601 N 601
N
Sbjct: 601 N 601
>gi|45439327 periplakin [Homo sapiens]
Length = 1756
Score = 41.6 bits (96), Expect = 0.002
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Query: 53 ENEVEKVIEEIRCKAIERGTGNDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGREL 112
+ E+E + ++R E G Y + IE P R + D L L R+
Sbjct: 968 QEELEALQLQLRALEQETRDGGQEYVVKEVLRIE---PDRAQADEVLQLREELEALRRQK 1024
Query: 113 RSKIAETFGLQENYIKIVINKKQLQLGKTLEEQGVAHNVKAMVLELKQSEEDARKNFQLE 172
++ AE LQ+ + K + Q T +E N + E +Q +ED ++ QL
Sbjct: 1025 GAREAEVLLLQQRVAALAEEKSRAQEKVTEKEVVKLQNDPQLEAEYQQLQEDHQRQDQLR 1084
Query: 173 EEEQNEAKLKEKQIQRTKR 191
E+++ E + +++R ++
Sbjct: 1085 EKQEEELSFLQDKLKRLEK 1103
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 39.3 bits (90), Expect = 0.010
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 2 AQKKYLQAKLTQFLREDRIQLWKPPYTDENKKVGLALKDLAKQYSDRLECCENEVE-KVI 60
A++K L+ K+ L+E + L ++ + D E CE ++ K++
Sbjct: 872 ARRKELEEKMVSLLQE-------------KNDLQLQVQSETENLMDAEERCEGLIKSKIL 918
Query: 61 EEIRCKAIERGTGNDNYRTTGIATIEVFLPPR---LKKDRKNL------LETRLHITGRE 111
E + K + + + + + L + LK+D +L +E H T +
Sbjct: 919 LEAKVKELTERLEEEEEMNSELVAKKRNLEDKCSSLKRDIDDLELTLTKVEKEKHATENK 978
Query: 112 LRSKIAETFGLQENYIKIVINKKQLQLG--KTLEEQGVAHNVKAMVLELKQSEEDARKNF 169
+++ E L+EN K+ KK LQ +TL++ V + ++++ E ++
Sbjct: 979 VKNLSEEMTALEENISKLTKEKKSLQEAHQQTLDDLQVEEDKVNGLIKINAKLE--QQTD 1036
Query: 170 QLEEEEQNEAKLKEKQIQRTKRGLEILAKRAAETVVDPE 208
LE + E KL+ ++R KR LE K + E+++D E
Sbjct: 1037 DLEGSLEQEKKLR-ADLERAKRKLEGDLKMSQESIMDLE 1074
Score = 31.2 bits (69), Expect = 2.9
Identities = 32/152 (21%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 40 DLAKQYSDRLECCENEVEKVIEEIRCKAIERGTGNDNYRTTGIATIEVFLPPRLKKDRK- 98
D ++ +LE ++E++ I+++ N T + F + K +++
Sbjct: 1212 DNLQRVKQKLEKEKSELKMEIDDMASNIEALSKSKSNIERTCRTVEDQFSEIKAKDEQQT 1271
Query: 99 ------NLLETRLHITGRELRSKIAETFGL--QENYIKIVINKKQLQLGKTLEEQGVAHN 150
N+ + RL EL ++ E L Q K + ++ +L + +EE+ A N
Sbjct: 1272 QLIHDLNMQKARLQTQNGELSHRVEEKESLISQLTKSKQALTQQLEELKRQMEEETKAKN 1331
Query: 151 VKAMVLELKQSEEDARKNFQLEEEEQNEAKLK 182
A L+ + + D + Q EEE++ +A+L+
Sbjct: 1332 AMAHALQSSRHDCDLLRE-QYEEEQEAKAELQ 1362
Score = 30.8 bits (68), Expect = 3.7
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 53/237 (22%)
Query: 18 DRIQLWKPPYTDENKKVGLALKDLAKQYSDRLECCENEVEKVIEEIRCKAIERGTGNDNY 77
DR+QL T +L + K+ + C+ EVE I+E R N
Sbjct: 1715 DRVQLLHSQNT--------SLINTKKKLEADIAQCQAEVENSIQESR---------NAEE 1757
Query: 78 RTTGIATIEVFLPPRLKKDRKNL-----LETRLHITGRELRSKI--AETFGLQ------- 123
+ T + LKK++ ++ L T ++L+ ++ AE L+
Sbjct: 1758 KAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQ 1817
Query: 124 --ENYIKIVINKKQLQLGKTLEEQGVAHNVKAMVLELK-QSEEDARKNFQLE-------- 172
EN ++ + N+ ++ + E AH + V E+ Q+EED + +L+
Sbjct: 1818 KLENRVRELENELDVEQKRGAEALKGAHKYERKVKEMTYQAEEDHKNILRLQDLVDKLQA 1877
Query: 173 ---------EEEQNEAKLKEKQIQRTKRGLEILAKRA--AETVVDPEMTPYLDIANQ 218
EE + +A + + +R + LE A+RA AE+ V+ D+ +Q
Sbjct: 1878 KVKSYKRQAEEAEEQANTQLSRCRRVQHELEEAAERADIAESQVNKLRAKSRDVGSQ 1934
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 38.9 bits (89), Expect = 0.014
Identities = 65/335 (19%), Positives = 144/335 (42%), Gaps = 32/335 (9%)
Query: 100 LLETRLHITGRELRSKIAETFGLQENYIKIVIN-KKQLQLG----KTLEEQGVAHNVKAM 154
L T + +L K+ ET E +K V++ +KQ++LG ++++ H ++
Sbjct: 472 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 531
Query: 155 VLELKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKRGLEILAKRAAETVVDPEMTPYLD 214
E+ ++D + LEE E+N+ K++E + E L +R TV+ P + Y +
Sbjct: 532 EEEINVLKQDLQN--ALEESERNKEKVRELE--------EKLVEREKGTVIKPPVEEYEE 581
Query: 215 IANQTGRSIRIPPSERKALMLAMGYHEKGRAFLKRKEYGIALPCLLDADKYFCECCRELL 274
+ ++ I ++ L Y E +K K+ + +D+ E +E +
Sbjct: 582 M--KSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDE--AEDMKEAM 637
Query: 275 DTVDNYAVLQLDIVWCYFRLEQLECLDDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGK 334
+ + + Q+ + ++ Q E L+D K+ +L + + H++L+ + N +
Sbjct: 638 NRMIDELNKQVSELSQLYKEAQAE-LEDYRKRKSLEDVTAEYIHKAEHEKLMQLT-NVSR 695
Query: 335 EKVLFLRLYLLQGIRNYHSGNDVEAYEYLNKARQLFKELYIDPSKVDNLLQLGFTAQEAR 394
K L +++ +S + L + +QL + + LQ+ T R
Sbjct: 696 AKA----EDALSEMKSQYS----KVLNELTQLKQLVDAQKENSVSITEHLQVITT---LR 744
Query: 395 LGLRACDGNVDHAATHITNRREELAQIRKEEKEKK 429
+ + + + H+ ++ E+A++ K+ E+K
Sbjct: 745 TAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEK 779
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 38.9 bits (89), Expect = 0.014
Identities = 65/335 (19%), Positives = 144/335 (42%), Gaps = 32/335 (9%)
Query: 100 LLETRLHITGRELRSKIAETFGLQENYIKIVIN-KKQLQLG----KTLEEQGVAHNVKAM 154
L T + +L K+ ET E +K V++ +KQ++LG ++++ H ++
Sbjct: 461 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 520
Query: 155 VLELKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKRGLEILAKRAAETVVDPEMTPYLD 214
E+ ++D + LEE E+N+ K++E + E L +R TV+ P + Y +
Sbjct: 521 EEEINVLKQDLQN--ALEESERNKEKVRELE--------EKLVEREKGTVIKPPVEEYEE 570
Query: 215 IANQTGRSIRIPPSERKALMLAMGYHEKGRAFLKRKEYGIALPCLLDADKYFCECCRELL 274
+ ++ I ++ L Y E +K K+ + +D+ E +E +
Sbjct: 571 M--KSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDE--AEDMKEAM 626
Query: 275 DTVDNYAVLQLDIVWCYFRLEQLECLDDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGK 334
+ + + Q+ + ++ Q E L+D K+ +L + + H++L+ + N +
Sbjct: 627 NRMIDELNKQVSELSQLYKEAQAE-LEDYRKRKSLEDVTAEYIHKAEHEKLMQLT-NVSR 684
Query: 335 EKVLFLRLYLLQGIRNYHSGNDVEAYEYLNKARQLFKELYIDPSKVDNLLQLGFTAQEAR 394
K L +++ +S + L + +QL + + LQ+ T R
Sbjct: 685 AKA----EDALSEMKSQYS----KVLNELTQLKQLVDAQKENSVSITEHLQVITT---LR 733
Query: 395 LGLRACDGNVDHAATHITNRREELAQIRKEEKEKK 429
+ + + + H+ ++ E+A++ K+ E+K
Sbjct: 734 TAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEK 768
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 38.9 bits (89), Expect = 0.014
Identities = 65/335 (19%), Positives = 144/335 (42%), Gaps = 32/335 (9%)
Query: 100 LLETRLHITGRELRSKIAETFGLQENYIKIVIN-KKQLQLG----KTLEEQGVAHNVKAM 154
L T + +L K+ ET E +K V++ +KQ++LG ++++ H ++
Sbjct: 440 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 499
Query: 155 VLELKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKRGLEILAKRAAETVVDPEMTPYLD 214
E+ ++D + LEE E+N+ K++E + E L +R TV+ P + Y +
Sbjct: 500 EEEINVLKQDLQN--ALEESERNKEKVRELE--------EKLVEREKGTVIKPPVEEYEE 549
Query: 215 IANQTGRSIRIPPSERKALMLAMGYHEKGRAFLKRKEYGIALPCLLDADKYFCECCRELL 274
+ ++ I ++ L Y E +K K+ + +D+ E +E +
Sbjct: 550 M--KSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDE--AEDMKEAM 605
Query: 275 DTVDNYAVLQLDIVWCYFRLEQLECLDDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGK 334
+ + + Q+ + ++ Q E L+D K+ +L + + H++L+ + N +
Sbjct: 606 NRMIDELNKQVSELSQLYKEAQAE-LEDYRKRKSLEDVTAEYIHKAEHEKLMQLT-NVSR 663
Query: 335 EKVLFLRLYLLQGIRNYHSGNDVEAYEYLNKARQLFKELYIDPSKVDNLLQLGFTAQEAR 394
K L +++ +S + L + +QL + + LQ+ T R
Sbjct: 664 AKA----EDALSEMKSQYS----KVLNELTQLKQLVDAQKENSVSITEHLQVITT---LR 712
Query: 395 LGLRACDGNVDHAATHITNRREELAQIRKEEKEKK 429
+ + + + H+ ++ E+A++ K+ E+K
Sbjct: 713 TAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEK 747
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 38.9 bits (89), Expect = 0.014
Identities = 65/335 (19%), Positives = 144/335 (42%), Gaps = 32/335 (9%)
Query: 100 LLETRLHITGRELRSKIAETFGLQENYIKIVIN-KKQLQLG----KTLEEQGVAHNVKAM 154
L T + +L K+ ET E +K V++ +KQ++LG ++++ H ++
Sbjct: 469 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 528
Query: 155 VLELKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKRGLEILAKRAAETVVDPEMTPYLD 214
E+ ++D + LEE E+N+ K++E + E L +R TV+ P + Y +
Sbjct: 529 EEEINVLKQDLQN--ALEESERNKEKVRELE--------EKLVEREKGTVIKPPVEEYEE 578
Query: 215 IANQTGRSIRIPPSERKALMLAMGYHEKGRAFLKRKEYGIALPCLLDADKYFCECCRELL 274
+ ++ I ++ L Y E +K K+ + +D+ E +E +
Sbjct: 579 M--KSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDE--AEDMKEAM 634
Query: 275 DTVDNYAVLQLDIVWCYFRLEQLECLDDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGK 334
+ + + Q+ + ++ Q E L+D K+ +L + + H++L+ + N +
Sbjct: 635 NRMIDELNKQVSELSQLYKEAQAE-LEDYRKRKSLEDVTAEYIHKAEHEKLMQLT-NVSR 692
Query: 335 EKVLFLRLYLLQGIRNYHSGNDVEAYEYLNKARQLFKELYIDPSKVDNLLQLGFTAQEAR 394
K L +++ +S + L + +QL + + LQ+ T R
Sbjct: 693 AKA----EDALSEMKSQYS----KVLNELTQLKQLVDAQKENSVSITEHLQVITT---LR 741
Query: 395 LGLRACDGNVDHAATHITNRREELAQIRKEEKEKK 429
+ + + + H+ ++ E+A++ K+ E+K
Sbjct: 742 TAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEK 776
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 38.9 bits (89), Expect = 0.014
Identities = 65/335 (19%), Positives = 144/335 (42%), Gaps = 32/335 (9%)
Query: 100 LLETRLHITGRELRSKIAETFGLQENYIKIVIN-KKQLQLG----KTLEEQGVAHNVKAM 154
L T + +L K+ ET E +K V++ +KQ++LG ++++ H ++
Sbjct: 469 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 528
Query: 155 VLELKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKRGLEILAKRAAETVVDPEMTPYLD 214
E+ ++D + LEE E+N+ K++E + E L +R TV+ P + Y +
Sbjct: 529 EEEINVLKQDLQN--ALEESERNKEKVRELE--------EKLVEREKGTVIKPPVEEYEE 578
Query: 215 IANQTGRSIRIPPSERKALMLAMGYHEKGRAFLKRKEYGIALPCLLDADKYFCECCRELL 274
+ ++ I ++ L Y E +K K+ + +D+ E +E +
Sbjct: 579 M--KSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDE--AEDMKEAM 634
Query: 275 DTVDNYAVLQLDIVWCYFRLEQLECLDDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGK 334
+ + + Q+ + ++ Q E L+D K+ +L + + H++L+ + N +
Sbjct: 635 NRMIDELNKQVSELSQLYKEAQAE-LEDYRKRKSLEDVTAEYIHKAEHEKLMQLT-NVSR 692
Query: 335 EKVLFLRLYLLQGIRNYHSGNDVEAYEYLNKARQLFKELYIDPSKVDNLLQLGFTAQEAR 394
K L +++ +S + L + +QL + + LQ+ T R
Sbjct: 693 AKA----EDALSEMKSQYS----KVLNELTQLKQLVDAQKENSVSITEHLQVITT---LR 741
Query: 395 LGLRACDGNVDHAATHITNRREELAQIRKEEKEKK 429
+ + + + H+ ++ E+A++ K+ E+K
Sbjct: 742 TAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEK 776
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 38.9 bits (89), Expect = 0.014
Identities = 65/335 (19%), Positives = 144/335 (42%), Gaps = 32/335 (9%)
Query: 100 LLETRLHITGRELRSKIAETFGLQENYIKIVIN-KKQLQLG----KTLEEQGVAHNVKAM 154
L T + +L K+ ET E +K V++ +KQ++LG ++++ H ++
Sbjct: 469 LNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 528
Query: 155 VLELKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKRGLEILAKRAAETVVDPEMTPYLD 214
E+ ++D + LEE E+N+ K++E + E L +R TV+ P + Y +
Sbjct: 529 EEEINVLKQDLQN--ALEESERNKEKVRELE--------EKLVEREKGTVIKPPVEEYEE 578
Query: 215 IANQTGRSIRIPPSERKALMLAMGYHEKGRAFLKRKEYGIALPCLLDADKYFCECCRELL 274
+ ++ I ++ L Y E +K K+ + +D+ E +E +
Sbjct: 579 M--KSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDE--AEDMKEAM 634
Query: 275 DTVDNYAVLQLDIVWCYFRLEQLECLDDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGK 334
+ + + Q+ + ++ Q E L+D K+ +L + + H++L+ + N +
Sbjct: 635 NRMIDELNKQVSELSQLYKEAQAE-LEDYRKRKSLEDVTAEYIHKAEHEKLMQLT-NVSR 692
Query: 335 EKVLFLRLYLLQGIRNYHSGNDVEAYEYLNKARQLFKELYIDPSKVDNLLQLGFTAQEAR 394
K L +++ +S + L + +QL + + LQ+ T R
Sbjct: 693 AKA----EDALSEMKSQYS----KVLNELTQLKQLVDAQKENSVSITEHLQVITT---LR 741
Query: 395 LGLRACDGNVDHAATHITNRREELAQIRKEEKEKK 429
+ + + + H+ ++ E+A++ K+ E+K
Sbjct: 742 TAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEK 776
>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
Length = 1101
Score = 38.9 bits (89), Expect = 0.014
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 36 LALKDLAKQ----YSDRLECCENEVEKVIEEIRCKAIERGTGNDNYRTTGIATIEVFLPP 91
L K+L +Q + DR+ E++VE + R +A+ + + T +A EV
Sbjct: 796 LESKELERQNLETFKDRMTE-ESKVEAELHAERIEALRKQFQTERETTKKVAQREV---A 851
Query: 92 RLKK--DRKNLLETRLHITGRELRSKIAETFG-LQENYIKIVINKKQLQLGKTLEEQGVA 148
LKK D N + T RELR K+AE L+ N KI K Q++L + + A
Sbjct: 852 ELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKANN-A 910
Query: 149 HNVKAMVLELKQSEEDARKNFQLEEEEQNEAKLKEKQIQR 188
N++ M KQ E++ ++ ++++ Q + + IQR
Sbjct: 911 QNIERM----KQIEKELKQMELIKDQYQKKNYEQSLSIQR 946
>gi|11342676 thyroid hormone receptor interactor 10 [Homo sapiens]
Length = 545
Score = 38.1 bits (87), Expect = 0.023
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 32/169 (18%)
Query: 414 RREELAQIRKEEKEKKRRRLENIRFLKGMGYSTHAAQQILLSNPQMWWLNDSNPETDNRQ 473
+R+ L Q +E + ++ ++ LK M + + PQM +P + Q
Sbjct: 343 QRKRLQQQLEERSRELQKEVDQREALKKM-------KDVYEKTPQM-----GDPASLEPQ 390
Query: 474 ESPSQENIDRLVY--MGFDALVAEAALRVFRGNVQLAAQTLAHNGGSLPPELPLSPEDSL 531
+ + NI+RL ++A +AEA RV L++ G SL P D
Sbjct: 391 IAETLSNIERLKLEVQKYEAWLAEAESRV-----------LSNRGDSLSRHA--RPPD-- 435
Query: 532 SPPATSPSDSAGTSSASTDEDMETEAVNEILEDIPEHEEDYLDSTLEDE 580
PPA++P DS+ S++ ++ E +E +D P + E D E+E
Sbjct: 436 -PPASAPPDSSSNSASQDTKESSEEPPSEESQDTPIYTE--FDEDFEEE 481
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 37.7 bits (86), Expect = 0.031
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 36/190 (18%)
Query: 7 LQAKLTQFLR--EDRIQLWK---PPYTDENKKVGLALKDLAKQYSDRLECCENEVEKVIE 61
LQA L L + +++++K T E K+ LK A+Q+ L + V + E
Sbjct: 1245 LQASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQHQRTLSAYQQRVTALQE 1304
Query: 62 EIRCKAIERGTGNDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAETFG 121
E R E+ T + + + V K +KN ++ AET G
Sbjct: 1305 ECRAAKAEQATVTSEFESYKVRVHNVL------KQQKNKSMSQ------------AETEG 1346
Query: 122 LQEN--YIKIVINKKQLQLGKTLEEQGVAHNVKAMVLELK--QSEEDA---RKNFQLEEE 174
++ +++++I++ +++L Q +N++ V EL+ QSE D R N L+E
Sbjct: 1347 AKQEREHLEMLIDQLKIKL------QDSQNNLQINVSELQTLQSEHDTLLERHNKMLQET 1400
Query: 175 EQNEAKLKEK 184
EA+L+EK
Sbjct: 1401 VSKEAELREK 1410
Score = 37.4 bits (85), Expect = 0.040
Identities = 43/209 (20%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 17 EDRIQLWKPPYTDENKKVGLALKDLAKQYSDRLECCENEVEKVIEEIRCKAIERGT---- 72
E++I+ + ++ +K+ +K +A + L+ E + V EE+ E+
Sbjct: 950 EEKIENLEKECKEKEEKIN-KIKLVAVKAKKELDSSRKETQTVKEELESLRSEKDQLSAS 1008
Query: 73 ------GNDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAETFGLQENY 126
G ++Y+ + + ++K+R N E R+ R+LR+ + + +
Sbjct: 1009 MRDLIQGAESYKNLLLEYEKQSEQLDVEKERANNFEHRIEDLTRQLRNSTLQCETINSDN 1068
Query: 127 IKIVINKKQLQLGKTLEEQGV--AHNVKAMV--------LELKQSEEDARKNFQLEEEEQ 176
++ + LQ L E + KAMV L+ +Q ++ EE Q
Sbjct: 1069 EDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQ 1128
Query: 177 NEAKLKEKQIQRTKRGLEILAKRAAETVV 205
+ + ++KQ+Q+T + LE++ K A +T +
Sbjct: 1129 VQLQKEKKQLQKTMQELELVKKDAQQTTL 1157
Score = 32.3 bits (72), Expect = 1.3
Identities = 36/194 (18%), Positives = 83/194 (42%), Gaps = 16/194 (8%)
Query: 15 LREDRIQLWKPPYTDENKKVGLALKDLAKQYSDRLECCEN------EVEKVIEEIRCKAI 68
L +D + P T ++K L +DL K ++ + E+EK IEE+R K +
Sbjct: 4 LVQDGVASPATPGTGKSKLETLPKEDLIKFAKKQMMLIQKAKSRCTELEKEIEELRSKPV 63
Query: 69 ERGTGNDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHI-TGRELRSKIAETFGLQE--- 124
GTG+ T ++ L + + +++ L + +I +E+ + + +
Sbjct: 64 TEGTGDIIKALT--ERLDALLLEKAETEQQCLSLKKENIKMKQEVEDSVTKMGDAHKELE 121
Query: 125 ----NYIKIVINKKQLQLGKTLEEQGVAHNVKAMVLELKQSEEDARKNFQLEEEEQNEAK 180
NY+K + N K + + N++ + E ++ + + + + ++ K
Sbjct: 122 QSHINYVKEIENLKNELMAVRSKYSEDKANLQKQLEEAMNTQLELSEQLKFQNNSEDNVK 181
Query: 181 LKEKQIQRTKRGLE 194
+++I++ + G E
Sbjct: 182 KLQEEIEKIRPGFE 195
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 37.4 bits (85), Expect = 0.040
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 37 ALKDLAKQYSDRLECCENEVEKV--IEEIRCKAIERGTG-NDNYRTTGIATIEVFLPPRL 93
AL+D+ K+ S + + NE K+ IEEI+C+ + T N+ ++ + +I+ L
Sbjct: 1104 ALQDIQKEKSLKEKELVNEKSKLAEIEEIKCRQEKEITKLNEELKSHKLESIKEIT--NL 1161
Query: 94 KKDRKNLLETRLHITGRELRSKIA-ETFGLQENYIKIVINKKQLQLGKTLEEQGVAHNVK 152
K ++ L++ +L + G+ K A E + +K + K++ +L K E+
Sbjct: 1162 KDAKQLLIQQKLELQGKADSLKAAVEQEKRNQQILKDQVKKEEEELKKEFIEK------- 1214
Query: 153 AMVLELKQSEEDARKNFQLEEEEQNEAKL 181
E K E K +++ E+NEAKL
Sbjct: 1215 ----EAKLHSEIKEKEVGMKKHEENEAKL 1239
Score = 33.5 bits (75), Expect = 0.58
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 12/68 (17%)
Query: 134 KQLQLGKTLEEQGVAHNVKAMVL-----------ELKQSEEDARKNFQLEEEEQNEAKLK 182
KQL + + LE QG A ++KA V ++K+ EE+ +K F +E+E + +++K
Sbjct: 1165 KQLLIQQKLELQGKADSLKAAVEQEKRNQQILKDQVKKEEEELKKEF-IEKEAKLHSEIK 1223
Query: 183 EKQIQRTK 190
EK++ K
Sbjct: 1224 EKEVGMKK 1231
Score = 30.8 bits (68), Expect = 3.7
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 94 KKDRKNLLETRLHITGRELRSKIAETFGLQENYIKIVINKKQLQ---LGKTLEEQGVAHN 150
K + +N L+ +L +EL ++ + LQ NY K KQLQ G+ E +
Sbjct: 989 KTELENKLQQQLTQAAQELAAEKEKISVLQNNYEKSQETFKQLQSDFYGRESELLATRQD 1048
Query: 151 VKAMVLELKQSEED--------ARKNFQLEE-------EEQNEAKLKEKQIQRTKRGLEI 195
+K++ +L ++ED +N ++E EQ+ AK KE+Q+Q + L+
Sbjct: 1049 LKSVEEKLSLAQEDLISNRNQIGNQNKLIQELKTAKATLEQDSAK-KEQQLQERCKALQD 1107
Query: 196 LAK 198
+ K
Sbjct: 1108 IQK 1110
Score = 30.0 bits (66), Expect = 6.4
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 26/209 (12%)
Query: 2 AQKKYLQAKLTQFLRED-RIQLWKPPYTDENKKVGLALKDLAKQYSDRL---ECCENEVE 57
A+ + L+ +L + E+ I+ K + + ++ + D+ +Y + E E +V
Sbjct: 135 AELQSLEQQLEEAQTENFNIKQMKDLFEQKAAQLATEIADIKSKYDEERSLREAAEQKVT 194
Query: 58 KVIEEIRCKA-IERGTGNDNYRTTGIATIEVFLPPRLKKDR---KNLLETRLHITGRELR 113
++ EE+ +A + + + + GI + V LKK+ + L++ RE
Sbjct: 195 RLTEELNKEATVIQDLKTELLQRPGIEDVAV-----LKKELVQVQTLMDNMTLERERESE 249
Query: 114 SKIAETFGLQENYI--KIVINKKQLQLGKTLEEQGV----AHNVKAMVLELKQSEEDARK 167
E LQ Y + I++ + +L K +E V +K+ V EL Q + +
Sbjct: 250 KLKDECKKLQSQYASSEATISQLRSELAKGPQEVAVYVQELQKLKSSVNELTQKNQTLTE 309
Query: 168 NFQLEE-------EEQNEAKLKEKQIQRT 189
N +E E+ NE + +K IQ T
Sbjct: 310 NLLKKEQDYTKLEEKHNEESVSKKNIQAT 338
>gi|18093112 ABT1-associated protein [Homo sapiens]
Length = 851
Score = 37.4 bits (85), Expect = 0.040
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 94 KKDRKNLLETRLHITGRELRSKIAETFGLQENYI-----KIVINKKQLQLGKT----LEE 144
KK++K L + + ++ L + Y +I INKK ++ K EE
Sbjct: 639 KKEKKRLKRKQKALAEEASEEELPSDVDLNDPYFAEEVKQIGINKKSVKSAKDGTSPEEE 698
Query: 145 QGVAHNVKAMVLELKQSEEDARKNFQLEE--EEQNEAKLKEKQIQRTKRGLE 194
+ M L + +ED++K+F + E QN +K K+KQ+ + K +E
Sbjct: 699 IEIERQKAEMALLMMDEDEDSKKHFNYNKIVEHQNLSKKKKKQLMKKKELIE 750
>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
sapiens]
Length = 1150
Score = 37.0 bits (84), Expect = 0.052
Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 24/207 (11%)
Query: 12 TQFLREDRIQLWKPPYTDENKKVGLALKDLAKQYSDRLECCENEVE----------KVIE 61
TQ+ R I+ +P T + + V ++ + + D C E +++E
Sbjct: 540 TQWYRFAEIRYHRPEETHKGRTVPAHVETVVLFFPDVWHCLPTRSEWETLSRGYKQQLVE 599
Query: 62 EIRCKAIERGTGNDNYRTTGIATIEVFLPPRLKK-DRKNLLETRLHITGRELRSKIAETF 120
+++ + E D E+ P K D K + L +EL S+ +
Sbjct: 600 KLQGERKEADGEQDEEEKDDGEAKEISTPTHWSKLDPKTMKVNDLR---KELESRALSSK 656
Query: 121 GLQENYIKIVINKKQLQLGKTLEEQGVAHNVKAMVLELKQSEEDARKNFQLEEEEQNEAK 180
GL+ I + KQL++ + EEQ LE + EED + + E++++ E +
Sbjct: 657 GLKSQLIARLT--KQLKVEEQKEEQ--------KELEKSEKEEDEDDDRKSEDDKEEEER 706
Query: 181 LKEKQIQRTKRGLEILAKRAAETVVDP 207
++++I+R +R + +V P
Sbjct: 707 KRQEEIERQRRERRYILPDEPAIIVHP 733
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 37.0 bits (84), Expect = 0.052
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 101 LETRLHITGRELRSKIAET--FGLQENYIKIVINKKQLQLGKTLEEQGVAHNVKAM-VLE 157
L +L +E RSK+ E F Q ++ + NK+QLQ K++E + + + ++E
Sbjct: 582 LRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIE 641
Query: 158 LKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKR 191
L++ +E+A++ Q +++ E +E + QR ++
Sbjct: 642 LEKQKEEAQRRAQERDKQWLEHVQQEDEHQRPRK 675
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 37.0 bits (84), Expect = 0.052
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 101 LETRLHITGRELRSKIAET--FGLQENYIKIVINKKQLQLGKTLEEQGVAHNVKAM-VLE 157
L +L +E RSK+ E F Q ++ + NK+QLQ K++E + + + ++E
Sbjct: 582 LRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIE 641
Query: 158 LKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKR 191
L++ +E+A++ Q +++ E +E + QR ++
Sbjct: 642 LEKQKEEAQRRAQERDKQWLEHVQQEDEHQRPRK 675
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 36.6 bits (83), Expect = 0.068
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 520 PPELPLSPEDSLSPPATSPSDSAGTSSASTDEDMETEAVNEILEDIPEHEEDYLDSTLED 579
PP P D P ++PS SAGT S +E+ E E E E+ E EE S
Sbjct: 240 PPPAPEQKYDPFEPTGSNPSSSAGTPSPEEEEEEEEEEEEE--EEDEEEEEGLSQSISRI 297
Query: 580 EEIIIAEY 587
E + Y
Sbjct: 298 SETLAGIY 305
>gi|10880975 hypothetical protein LOC57821 [Homo sapiens]
Length = 508
Score = 36.2 bits (82), Expect = 0.089
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 70 RGTGNDNYRTTGI----ATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAETFGLQ-E 124
+G G N+RT T L PR K+ +K L E R + E R KI E + E
Sbjct: 312 KGNGKSNHRTQSAHISPVTSTYCLSPRQKELQKQLEEKREKLKREEERRKIEEEKEKKRE 371
Query: 125 NYI--KIVINKKQLQLGKTLEEQGVAHNVKAMVLELKQSEE--DARKNFQLEEEEQNEAK 180
N I K + KK+ Q+ LE + + +A +E S E D ++ F+L ++++E +
Sbjct: 372 NDIVFKAWLQKKREQV---LEMRRIQ---RAKEIEDMNSRENRDPQQAFRLWLKKKHEEQ 425
Query: 181 LKEKQIQRTKRGLEIL 196
+KE+Q + ++ E L
Sbjct: 426 MKERQTEELRKQEECL 441
>gi|219689136 coiled-coil domain containing 68 [Homo sapiens]
Length = 335
Score = 35.8 bits (81), Expect = 0.12
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 89 LPPRLKKDRKNLLETRLHITGRELRSKIAETFG------------LQE--NYIKIVINKK 134
L R++K+++ LLE +L + + L+ K + T+G LQE ++++ VI+ +
Sbjct: 194 LVQRMEKEKRTLLERKLSLENKLLQLKSSATYGKSCQDLQREISILQEQISHLQFVIHSQ 253
Query: 135 QLQLGKTLEE-QGVAHNVKAMVLELKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKRGL 193
L ++E +G+ +N+K E + E+ R+ + E + E K + T R
Sbjct: 254 HQNLRSVIQEMEGLKNNLK----EQDKRIENLREKVNILEAQNKELKTQVALSSETPRTK 309
Query: 194 EILAKRAAETVVDPEMTPYL 213
A +E + ++PYL
Sbjct: 310 VSKAVSTSELKTE-GVSPYL 328
>gi|13376818 coiled-coil domain containing 68 [Homo sapiens]
Length = 335
Score = 35.8 bits (81), Expect = 0.12
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 89 LPPRLKKDRKNLLETRLHITGRELRSKIAETFG------------LQE--NYIKIVINKK 134
L R++K+++ LLE +L + + L+ K + T+G LQE ++++ VI+ +
Sbjct: 194 LVQRMEKEKRTLLERKLSLENKLLQLKSSATYGKSCQDLQREISILQEQISHLQFVIHSQ 253
Query: 135 QLQLGKTLEE-QGVAHNVKAMVLELKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKRGL 193
L ++E +G+ +N+K E + E+ R+ + E + E K + T R
Sbjct: 254 HQNLRSVIQEMEGLKNNLK----EQDKRIENLREKVNILEAQNKELKTQVALSSETPRTK 309
Query: 194 EILAKRAAETVVDPEMTPYL 213
A +E + ++PYL
Sbjct: 310 VSKAVSTSELKTE-GVSPYL 328
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 35.8 bits (81), Expect = 0.12
Identities = 20/72 (27%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 123 QENYIKIVINK----KQLQLGKTLEEQGVAHNVKAMVLELKQSEEDARKNFQLEEEEQNE 178
+EN ++ +N+ K+ QL + EE+ ++ + + +E K+ EE+ + + +E+E+ +
Sbjct: 62 EENILEEELNEDIKVKEEQLKNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEK 121
Query: 179 AKLKEKQIQRTK 190
K KEK+ +R K
Sbjct: 122 EKEKEKEKEREK 133
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 35.8 bits (81), Expect = 0.12
Identities = 20/72 (27%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 123 QENYIKIVINK----KQLQLGKTLEEQGVAHNVKAMVLELKQSEEDARKNFQLEEEEQNE 178
+EN ++ +N+ K+ QL + EE+ ++ + + +E K+ EE+ + + +E+E+ +
Sbjct: 62 EENILEEELNEDIKVKEEQLKNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEK 121
Query: 179 AKLKEKQIQRTK 190
K KEK+ +R K
Sbjct: 122 EKEKEKEKEREK 133
>gi|21389505 janus kinase and microtubule interacting protein 1
isoform 2 [Homo sapiens]
Length = 626
Score = 35.4 bits (80), Expect = 0.15
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 92 RLKKDRKNLLETRLHITGRELRSKIAET-FGLQENYIKIVINKKQLQLGKTLEEQ----- 145
R K ++ + + + ELR+K+ Q+ K+ +++LQ K EQ
Sbjct: 6 RSKGEKPEMETDAVQMANEELRAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRH 65
Query: 146 -GVAHNVKAMVLELKQSEEDARKNFQLEEEEQNEA---KLKEKQIQRTKRGLEILAKRAA 201
+KA + E K E A + + + EQ A K+KE ++QR + L +L AA
Sbjct: 66 TAYISELKAKLHEEKTKELQALREGLIRQHEQEAARTAKIKEGELQRLQATLNVLRDGAA 125
Query: 202 ETV 204
+ V
Sbjct: 126 DKV 128
>gi|150456473 janus kinase and microtubule interacting protein 1
isoform 1 [Homo sapiens]
Length = 831
Score = 35.4 bits (80), Expect = 0.15
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 92 RLKKDRKNLLETRLHITGRELRSKIAET-FGLQENYIKIVINKKQLQLGKTLEEQ----- 145
R K ++ + + + ELR+K+ Q+ K+ +++LQ K EQ
Sbjct: 6 RSKGEKPEMETDAVQMANEELRAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRH 65
Query: 146 -GVAHNVKAMVLELKQSEEDARKNFQLEEEEQNEA---KLKEKQIQRTKRGLEILAKRAA 201
+KA + E K E A + + + EQ A K+KE ++QR + L +L AA
Sbjct: 66 TAYISELKAKLHEEKTKELQALREGLIRQHEQEAARTAKIKEGELQRLQATLNVLRDGAA 125
Query: 202 ETV 204
+ V
Sbjct: 126 DKV 128
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 35.4 bits (80), Expect = 0.15
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 28/195 (14%)
Query: 5 KYLQAKLTQFLRE----DRIQLWKPPYTDENKKVGLALKDLAKQYSDRLECCENEVEKVI 60
K L K+ +R +RI+ W+ + EN + +++D +Y +L +++ +
Sbjct: 322 KELDVKIKNVIRNVHMLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKL----SDLRARL 377
Query: 61 EEIRCKAIE-RGTGNDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAET 119
+E +A + G +N R G +V L+ D L T A++
Sbjct: 378 QEAAAQAKQANGLNQENERALGAIQRQVKEINSLQSDFTKYLTT-------------ADS 424
Query: 120 FGLQENYIKIVINKKQLQLGKTLEEQGVA-HNVKAMVLELKQSEEDARKNFQLEEEEQNE 178
LQ N ++ K Q + K A + V EL +S A K +EE E++
Sbjct: 425 SLLQTNIALQLMEKSQKEYEKLAASLNEARQELSDKVRELSRS---AGKTSLVEEAEKHA 481
Query: 179 AKLKE--KQIQRTKR 191
L+E KQ++ KR
Sbjct: 482 RSLQELAKQLEEIKR 496
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 35.4 bits (80), Expect = 0.15
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 28/195 (14%)
Query: 5 KYLQAKLTQFLRE----DRIQLWKPPYTDENKKVGLALKDLAKQYSDRLECCENEVEKVI 60
K L K+ +R +RI+ W+ + EN + +++D +Y +L +++ +
Sbjct: 1931 KELDVKIKNVIRNVHMLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKL----SDLRARL 1986
Query: 61 EEIRCKAIE-RGTGNDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAET 119
+E +A + G +N R G +V L+ D L T A++
Sbjct: 1987 QEAAAQAKQANGLNQENERALGAIQRQVKEINSLQSDFTKYLTT-------------ADS 2033
Query: 120 FGLQENYIKIVINKKQLQLGKTLEEQGVA-HNVKAMVLELKQSEEDARKNFQLEEEEQNE 178
LQ N ++ K Q + K A + V EL +S A K +EE E++
Sbjct: 2034 SLLQTNIALQLMEKSQKEYEKLAASLNEARQELSDKVRELSRS---AGKTSLVEEAEKHA 2090
Query: 179 AKLKE--KQIQRTKR 191
L+E KQ++ KR
Sbjct: 2091 RSLQELAKQLEEIKR 2105
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 35.0 bits (79), Expect = 0.20
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 93 LKKDRKNLLET--RLHITGRE-LRSKIAETFGLQENYIKIVINKKQLQLGKTLEEQGVAH 149
LK+ R+ +LE +LH+ E L+ AE L+++++K + + Q++ + E+ H
Sbjct: 951 LKQSREIVLEDLKKLHVENDEKLQLLRAELQSLEQSHLKELEDTLQVRHIQEFEKVMTDH 1010
Query: 150 NVKAMVLE------LKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKRGLEI-LAKRAAE 202
V L+ + Q +E + Q +E++ E KLK + T+ LE+ LA + AE
Sbjct: 1011 RVSLEELKKENQQIINQIQESHAEIIQEKEKQLQELKLKVSDLSDTRCKLEVELALKEAE 1070
Query: 203 T 203
T
Sbjct: 1071 T 1071
>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
sapiens]
Length = 1594
Score = 35.0 bits (79), Expect = 0.20
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 93 LKKDRKNLLET--RLHITGRE-LRSKIAETFGLQENYIKIVINKKQLQLGKTLEEQGVAH 149
LK+ R+ +LE +LH+ E L+ AE L+++++K + + Q++ + E+ H
Sbjct: 951 LKQSREIVLEDLKKLHVENDEKLQLLRAELQSLEQSHLKELEDTLQVRHIQEFEKVMTDH 1010
Query: 150 NVKAMVLE------LKQSEEDARKNFQLEEEEQNEAKLKEKQIQRTKRGLEI-LAKRAAE 202
V L+ + Q +E + Q +E++ E KLK + T+ LE+ LA + AE
Sbjct: 1011 RVSLEELKKENQQIINQIQESHAEIIQEKEKQLQELKLKVSDLSDTRCKLEVELALKEAE 1070
Query: 203 T 203
T
Sbjct: 1071 T 1071
>gi|13375952 TBC1 domain family, member 17 [Homo sapiens]
Length = 648
Score = 35.0 bits (79), Expect = 0.20
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 508 AAQTLAHNG----GSLPPELPLSPEDSLSPPATSPSDSAGTSSASTDEDMETEAVNEILE 563
A L HN G PP P SP + SP SP+ + T STD + ++ EIL
Sbjct: 580 ACPELPHNVQEILGLAPPAEPHSPSPTASPLPLSPTRAPPTPPPSTDTAPQPDSSLEIL- 638
Query: 564 DIPEHEEDYLDS 575
PE E++ DS
Sbjct: 639 --PEEEDEGADS 648
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,677,410
Number of Sequences: 37866
Number of extensions: 1060698
Number of successful extensions: 8399
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 180
Number of HSP's that attempted gapping in prelim test: 7901
Number of HSP's gapped (non-prelim): 645
length of query: 601
length of database: 18,247,518
effective HSP length: 108
effective length of query: 493
effective length of database: 14,157,990
effective search space: 6979889070
effective search space used: 6979889070
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.