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Search of human proteins with 19923262
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
(215 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens] 431 e-121
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 372 e-103
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 372 e-103
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens] 359 1e-99
gi|10190714 RAS-related protein RAB-22A [Homo sapiens] 191 4e-49
gi|33589861 RAB31, member RAS oncogene family [Homo sapiens] 185 2e-47
gi|11967981 RAB17, member RAS oncogene family [Homo sapiens] 172 3e-43
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 170 1e-42
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens] 169 2e-42
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 167 6e-42
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa... 165 2e-41
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa... 164 5e-41
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 163 9e-41
gi|7661922 RAB21, member RAS oncogene family [Homo sapiens] 161 3e-40
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 157 8e-39
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 154 4e-38
gi|116812567 RAB25 [Homo sapiens] 154 7e-38
gi|117938299 RAB6C-like [Homo sapiens] 154 7e-38
gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens] 152 3e-37
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 152 3e-37
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 151 4e-37
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 151 5e-37
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 151 5e-37
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 151 5e-37
gi|74096429 RAB41, member RAS oncogene family [Homo sapiens] 150 1e-36
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 149 1e-36
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 149 1e-36
gi|16933567 mel transforming oncogene [Homo sapiens] 149 2e-36
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 147 5e-36
gi|19923483 GTPase Rab14 [Homo sapiens] 147 9e-36
>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 431 bits (1109), Expect = e-121
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ 60
MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
Sbjct: 1 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ 60
Query: 61 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR 120
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
Sbjct: 61 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR 120
Query: 121 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK 180
QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
Sbjct: 121 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK 180
Query: 181 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN 215
LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
Sbjct: 181 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN 215
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 372 bits (956), Expect = e-103
Identities = 188/216 (87%), Positives = 198/216 (91%), Gaps = 1/216 (0%)
Query: 1 MASRG-ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT 59
MA RG A RPNGP GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLT
Sbjct: 1 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT 60
Query: 60 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ 119
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN ++FARAKNWVKELQ
Sbjct: 61 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 120
Query: 120 RQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK 179
RQASPNIVIAL+GNKADLA+KRAV+FQEAQ+YADDNSLLFMETSAKT+MNVNEIFMAIAK
Sbjct: 121 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 180
Query: 180 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN 215
KLPKNEPQN R RGVDL E +R+QCCSN
Sbjct: 181 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN 216
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 372 bits (956), Expect = e-103
Identities = 188/216 (87%), Positives = 198/216 (91%), Gaps = 1/216 (0%)
Query: 1 MASRG-ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT 59
MA RG A RPNGP GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLT
Sbjct: 1 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT 60
Query: 60 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ 119
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN ++FARAKNWVKELQ
Sbjct: 61 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 120
Query: 120 RQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK 179
RQASPNIVIAL+GNKADLA+KRAV+FQEAQ+YADDNSLLFMETSAKT+MNVNEIFMAIAK
Sbjct: 121 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 180
Query: 180 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN 215
KLPKNEPQN R RGVDL E +R+QCCSN
Sbjct: 181 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN 216
>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 359 bits (921), Expect = 1e-99
Identities = 176/215 (81%), Positives = 196/215 (91%)
Query: 1 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ 60
M SR RPNG +KICQFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQ
Sbjct: 1 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 60
Query: 61 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR 120
+VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN+E+FARAK WVKELQR
Sbjct: 61 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR 120
Query: 121 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK 180
QASP+IVIAL+GNKADLANKR V+++EAQ+YADDNSLLFMETSAKT+MNVN++F+AIAKK
Sbjct: 121 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK 180
Query: 181 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN 215
LPK+EPQN G + R RGVDL E +Q ++QCCSN
Sbjct: 181 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN 215
>gi|10190714 RAS-related protein RAB-22A [Homo sapiens]
Length = 194
Score = 191 bits (485), Expect = 4e-49
Identities = 95/194 (48%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
Query: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 79
+ K+ LLG++ VGKSS+V RFV+ F TIGA+F+T+TV + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
Query: 80 ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLAN 139
ER+ +LAPMYYRG+ AAI+VYDIT EE+F+ KNWVKEL++ PNIV+A++GNK DL +
Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLID 124
Query: 140 KRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGV 199
R V ++A+ YAD +F+ETSAK ++N+NE+F+ I++++P + P G+G
Sbjct: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSG----GKGF 180
Query: 200 DL-TEPTQPTRNQC 212
L +P++P R+ C
Sbjct: 181 KLRRQPSEPKRSCC 194
>gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
Length = 195
Score = 185 bits (470), Expect = 2e-47
Identities = 90/196 (45%), Positives = 131/196 (66%), Gaps = 4/196 (2%)
Query: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
I + K+ LLG++ VGKSS+V RFV+ F TIGA+F+T+TV + KF IWDTA
Sbjct: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
Query: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
GQER+HSLAPMYYRG+ AA++VYDIT ++SF K WVKEL+ NIV+A++GNK DL
Sbjct: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
Query: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGR 197
++ R V ++A+ YA+ + +ETSAK ++N+ E+F I++++P +P G N
Sbjct: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGT--- 180
Query: 198 GVDLTEPTQPTRNQCC 213
+ + +PT +CC
Sbjct: 181 -IKVEKPTMQASRRCC 195
>gi|11967981 RAB17, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 172 bits (435), Expect = 3e-43
Identities = 87/196 (44%), Positives = 128/196 (65%), Gaps = 4/196 (2%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FKLVLLG +VGKSSL LR+VK F T+G AF T+ V + T++K EIWDTAGQE
Sbjct: 20 FKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAGQE 78
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP-NIVIALSGNKADLAN 139
+YHS+ +Y+RGA AA++VYDIT ++SF +A+ W+K+L+ + P +++ L GNK DL+
Sbjct: 79 KYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQ 138
Query: 140 KRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGV 199
+R V FQE + +AD LLFMETSAK + V+E+F +A++L + + + RG
Sbjct: 139 EREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSDEE--GQALRGDAA 196
Query: 200 DLTEPTQPTRNQCCSN 215
+ +CC++
Sbjct: 197 VALNKGPARQAKCCAH 212
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 170 bits (430), Expect = 1e-42
Identities = 90/196 (45%), Positives = 123/196 (62%), Gaps = 6/196 (3%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGKS L+LRF + E STIG F +T+ LD T+K +IWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
R+ ++ YYRGA IVVYD+T++ES+A K W++E+ R AS N+ L GNK+DL K
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTK 128
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGR--- 197
+ VD A+ +AD + F+ETSAK + NV + FM +A ++ K PGA S R
Sbjct: 129 KVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR--MGPGAASGGERPNL 186
Query: 198 GVDLTEPTQPTRNQCC 213
+D T P +P CC
Sbjct: 187 KIDST-PVKPAGGGCC 201
>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
Length = 208
Score = 169 bits (428), Expect = 2e-42
Identities = 85/202 (42%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 11 GPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVK 70
G + GN + +FKLV LGE +VGK+SL+ RF+ F ++TIG FL++T+ L+D TV+
Sbjct: 4 GGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR 63
Query: 71 FEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIAL 130
++WDTAGQER+ SL P Y R + A+VVYDITN SF + W+ +++ + +++I L
Sbjct: 64 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIML 123
Query: 131 SGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPG 190
GNK DLA+KR + +E + A + S++F+ETSAKT NV ++F +A LP E N
Sbjct: 124 VGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGME--NVQ 181
Query: 191 ANSARGR-GVDLTEPTQPTRNQ 211
S G + L +P +P ++
Sbjct: 182 EKSKEGMIDIKLDKPQEPPASE 203
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 167 bits (423), Expect = 6e-42
Identities = 85/194 (43%), Positives = 119/194 (61%), Gaps = 1/194 (0%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGKS L+LRF + E STIG F +T+ LD T+K +IWDTAGQE
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
R+ ++ YYRGA IVVYD+T++ESF K W++E+ R AS N+ L GNK DL K
Sbjct: 72 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTK 131
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVD 200
+ VD+ A+ +AD + F+ETSAK + NV + FM +A ++ K A A V
Sbjct: 132 KVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVK 191
Query: 201 L-TEPTQPTRNQCC 213
+ + P + + CC
Sbjct: 192 IQSTPVKQSGGGCC 205
>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
sapiens]
Length = 208
Score = 165 bits (418), Expect = 2e-41
Identities = 78/175 (44%), Positives = 118/175 (67%)
Query: 11 GPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVK 70
G + GN + +FKLV LGE +VGK+SL+ RF+ F ++TIG FL++T+ L+D T++
Sbjct: 4 GGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIR 63
Query: 71 FEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIAL 130
++WDTAGQER+ SL P Y R + AA+VVYDITN SF + W+ +++ + +++I L
Sbjct: 64 LQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIML 123
Query: 131 SGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
GNK DLA+KR V +E + A + +++F+ETSAK NV ++F +A LP E
Sbjct: 124 VGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGME 178
>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
sapiens]
Length = 208
Score = 164 bits (415), Expect = 5e-41
Identities = 78/175 (44%), Positives = 117/175 (66%)
Query: 11 GPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVK 70
G + GN + +FKLV LGE +VGK+SL+ RF+ F ++TIG FL++T+ L+D TV+
Sbjct: 4 GGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR 63
Query: 71 FEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIAL 130
++WDTAGQER+ SL P Y R + A+VVYDITN SF + W+ +++ + +++I L
Sbjct: 64 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIML 123
Query: 131 SGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
GNK DLA+KR V +E + A + +++F+ETSAK NV ++F +A LP E
Sbjct: 124 VGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGME 178
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 163 bits (413), Expect = 9e-41
Identities = 86/206 (41%), Positives = 126/206 (61%), Gaps = 11/206 (5%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FK+VL+G+S VGKS+L+ RF + +F+ +STIG F T+++ +D T+K +IWDTAGQE
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
RY ++ YYRGA A++VYDI ++ + W+KEL+ A NIVI L GNK+DL +
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK-----------NEPQNP 189
RAV EA+++A+ N+L F+ETSA S NV E F I ++ + ++P
Sbjct: 132 RAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESP 191
Query: 190 GANSARGRGVDLTEPTQPTRNQCCSN 215
G N T+ +P + QCC N
Sbjct: 192 GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]
Length = 225
Score = 161 bits (408), Expect = 3e-40
Identities = 84/215 (39%), Positives = 125/215 (58%), Gaps = 10/215 (4%)
Query: 11 GPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVK 70
G + FK+VLLGE VGK+SLVLR+ + +F++ +T+ A+FLT+ + + V
Sbjct: 10 GAAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVN 69
Query: 71 FEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIAL 130
IWDTAGQER+H+L P+YYR + AI+VYDIT+E+SF + KNWVKEL++ I + +
Sbjct: 70 LAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCI 129
Query: 131 SGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK------- 183
GNK DL +R V QEA+SYA+ TSAK + + E+F+ + K++ +
Sbjct: 130 VGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 189
Query: 184 ---NEPQNPGANSARGRGVDLTEPTQPTRNQCCSN 215
N PG + +D Q + CCS+
Sbjct: 190 AKGNGSSQPGTARRGVQIIDDEPQAQTSGGGCCSS 224
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 157 bits (396), Expect = 8e-39
Identities = 84/204 (41%), Positives = 126/204 (61%), Gaps = 9/204 (4%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FK+VL+G+S VGKS+L+ RF + +F+ +STIG F T+++ +D T+K +IWDTAGQE
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
RY ++ YYRGA A++VYDI ++ + W+KEL+ A NIVI L GNK+DL +
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNV--------NEIFMAIAKKLPKNEPQNPGAN 192
RAV EA+++A+ N L F+ETSA S NV EI+ +++K + +N +
Sbjct: 132 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSP 191
Query: 193 SARGRGVDLTEPTQ-PTRNQCCSN 215
S + + T+ + QCC N
Sbjct: 192 SNNVVPIHVPPTTENKPKVQCCQN 215
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 154 bits (390), Expect = 4e-38
Identities = 76/192 (39%), Positives = 116/192 (60%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ L++RF + F+ STIG F +TV ++ +K ++WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
R+ ++ YYRGA I+VYDIT+E+SF +NW+K ++ AS + L GNK D+ K
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVD 200
R V ++A A ++ + F ETSAK+SMNV+E F ++A+ + N + D
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 188
Query: 201 LTEPTQPTRNQC 212
L + N+C
Sbjct: 189 LKTCDKKNTNKC 200
>gi|116812567 RAB25 [Homo sapiens]
Length = 213
Score = 154 bits (388), Expect = 7e-38
Identities = 84/200 (42%), Positives = 119/200 (59%), Gaps = 9/200 (4%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FK+VL+GES VGK++L+ RF + +F +TIG F T+TV L VK +IWDTAG E
Sbjct: 13 FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 72
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
RY ++ YYRGA A++V+D+T +++A + W+KEL A IV+ L GNK+DL+
Sbjct: 73 RYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQA 132
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL-PKNEPQNPGANSARGRGV 199
R V +EA+ +A++N LLF+ETSA S NV F + K++ K Q NS R +
Sbjct: 133 REVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR--QNSIRTNAI 190
Query: 200 DL------TEPTQPTRNQCC 213
L EP + CC
Sbjct: 191 TLGSAQAGQEPGPGEKRACC 210
>gi|117938299 RAB6C-like [Homo sapiens]
Length = 254
Score = 154 bits (388), Expect = 7e-38
Identities = 79/198 (39%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 11 GPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVK 70
G + GN + +FKLV LGE +V K+SL+ RF F ++ IG FL++T+ L+D T+
Sbjct: 4 GGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIG 63
Query: 71 FEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIAL 130
+WDTAGQER SL P Y R + AA+VVYDITN SF + W+ +++ + +++I L
Sbjct: 64 LRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVIITL 123
Query: 131 SGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPG 190
GNK DLA+KR V +E + A ++ F+ET AK NV ++F +A LP E G
Sbjct: 124 VGNKTDLADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDG 183
Query: 191 ANSARGRGVDLTEPTQPT 208
+ + L +P + T
Sbjct: 184 SREDMS-DIKLEKPQEQT 200
>gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens]
Length = 254
Score = 152 bits (383), Expect = 3e-37
Identities = 78/198 (39%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 11 GPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVK 70
G + GN + +FKLV LGE +V K+SL+ RF F ++ IG FL++T+ L+D T+
Sbjct: 4 GGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIG 63
Query: 71 FEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIAL 130
+WDTAGQER SL P Y R + AA+VVYDITN SF + W+ +++ + +++I L
Sbjct: 64 LRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITL 123
Query: 131 SGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPG 190
GN+ DLA+KR V +E + A ++ F+ET AK NV ++F +A LP E G
Sbjct: 124 VGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDG 183
Query: 191 ANSARGRGVDLTEPTQPT 208
+ + L +P + T
Sbjct: 184 SREDMS-DIKLEKPQEQT 200
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 152 bits (383), Expect = 3e-37
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 2/185 (1%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ L+ RF + F+ STIG F +T+ LD +K +IWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
R+ ++ YYRGA ++VYDITNE+SF KNW++ ++ AS ++ + GNK D+ +K
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDK 128
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL--PKNEPQNPGANSARGRG 198
R V + + A D + F+ETSAK+S NV E F +A+ + N N ++ G
Sbjct: 129 RQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGP 188
Query: 199 VDLTE 203
V +TE
Sbjct: 189 VKITE 193
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 151 bits (382), Expect = 4e-37
Identities = 76/173 (43%), Positives = 111/173 (64%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FK+VL+G + VGK+ LV RF +G F Q +TIG F+ +TV ++ VK +IWDTAGQE
Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 69
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
R+ S+ YYR A A I+ YDIT EESF W++E+++ AS ++ L GNK DLA +
Sbjct: 70 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAER 129
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANS 193
R V Q A+ +++ + ++ETSAK S NV ++F+ +A +L QN N+
Sbjct: 130 REVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNN 182
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 151 bits (381), Expect = 5e-37
Identities = 75/192 (39%), Positives = 113/192 (58%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ L++RF + F+ STIG F +TV ++ +K ++WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
R+ ++ YYRGA I+ YDIT+E+SF +NW+K + AS + L GNK D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVD 200
R V ++A A ++ + F ETSAK+SMNV+E F ++A+ + N + D
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 312
Query: 201 LTEPTQPTRNQC 212
L N+C
Sbjct: 313 LKTCDIKNTNKC 324
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 151 bits (381), Expect = 5e-37
Identities = 75/192 (39%), Positives = 113/192 (58%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ L++RF + F+ STIG F +TV ++ +K ++WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
R+ ++ YYRGA I+ YDIT+E+SF +NW+K + AS + L GNK D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVD 200
R V ++A A ++ + F ETSAK+SMNV+E F ++A+ + N + D
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 312
Query: 201 LTEPTQPTRNQC 212
L N+C
Sbjct: 313 LKTCDIKNTNKC 324
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 151 bits (381), Expect = 5e-37
Identities = 75/192 (39%), Positives = 113/192 (58%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ L++RF + F+ STIG F +TV ++ +K ++WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
R+ ++ YYRGA I+ YDIT+E+SF +NW+K + AS + L GNK D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVD 200
R V ++A A ++ + F ETSAK+SMNV+E F ++A+ + N + D
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 312
Query: 201 LTEPTQPTRNQC 212
L N+C
Sbjct: 313 LKTCDIKNTNKC 324
>gi|74096429 RAB41, member RAS oncogene family [Homo sapiens]
Length = 222
Score = 150 bits (378), Expect = 1e-36
Identities = 72/172 (41%), Positives = 111/172 (64%)
Query: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
+C+ KL+ LGE +VGK+S++ RF+ F ++T+G FL++T+ L+D V+ ++WDTA
Sbjct: 29 LCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 88
Query: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
GQER+HSL P Y R + A+VVYDITN SF WV+ ++ + ++VI L GNK DL
Sbjct: 89 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDL 148
Query: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNP 189
NKR V ++ + + + +++F+ETSAKT NV ++F +A L P
Sbjct: 149 DNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRTSPP 200
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 149 bits (377), Expect = 1e-36
Identities = 70/161 (43%), Positives = 110/161 (68%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FK +++G++ VGKS L+L+F +F + TIG F + V +D +K +IWDTAGQE
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 66
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
+ S+ YYRGA A++VYDIT E+F +W+++ ++ +S N+VI L GNK+DL ++
Sbjct: 67 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESR 126
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
R V +E +++A ++ L+FMETSAKT+ NV E F+ AK++
Sbjct: 127 RDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 149 bits (377), Expect = 1e-36
Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 5/205 (2%)
Query: 11 GPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQES-TIGAAFLTQTVCLDDTTV 69
GP+ + + K +L+G+S VGK+SL+++F +G+F S T+G F + V +D V
Sbjct: 14 GPDFNDHVLH-KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRV 72
Query: 70 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIA 129
K +IWDTAGQER+ S+ YYR AQA +++YDITN+ SF + W+ E+ A ++VI
Sbjct: 73 KLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIM 132
Query: 130 LSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNP 189
L GNKAD++++R + ++ ++ A + + F+ETSAKT MNV F+AIAK+L
Sbjct: 133 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQA 192
Query: 190 GANSARGRGVDLTEPTQPTRNQCCS 214
S + R D E +Q R+ CCS
Sbjct: 193 DEPSFQIR--DYVE-SQKKRSSCCS 214
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 149 bits (376), Expect = 2e-36
Identities = 77/192 (40%), Positives = 118/192 (61%), Gaps = 3/192 (1%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ ++ RF + F+ STIG F +T+ LD +K +IWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
R+ ++ YYRGA ++VYDITNE+SF +NW++ ++ AS ++ + GNK D+ +K
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDK 128
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARG--RG 198
R V + + A D + FMETSAK ++NV F +A+ + + NS +G +G
Sbjct: 129 RQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQG 188
Query: 199 VDLTEPTQPTRN 210
V +T P Q R+
Sbjct: 189 VKIT-PDQQKRS 199
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 147 bits (372), Expect = 5e-36
Identities = 67/161 (41%), Positives = 109/161 (67%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FK +++G++ VGKS L+L+F +F + TIG F + + +D +K +IWDTAGQE
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
+ S+ YYRGA A++VYDIT ++F W+++ ++ ++ N+VI L GNK+DL ++
Sbjct: 67 SFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 126
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
R V +E +++A ++ L+FMETSAKT+ NV E F+ AK++
Sbjct: 127 REVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 147 bits (370), Expect = 9e-36
Identities = 78/202 (38%), Positives = 119/202 (58%), Gaps = 10/202 (4%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
FK +++G+ VGKS L+ +F + +F TIG F T+ + + +K +IWDTAGQE
Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 71
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
R+ ++ YYRGA A++VYDIT ++ +W+ + + +PN VI L GNKADL +
Sbjct: 72 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQ 131
Query: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKN-EPQNPGANSARG--- 196
R V ++EA+ +A++N LLF+E SAKT NV + F+ AKK+ +N + + N+A
Sbjct: 132 RDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQ 191
Query: 197 ------RGVDLTEPTQPTRNQC 212
+G LT QP R C
Sbjct: 192 HKPSAPQGGRLTSEPQPQREGC 213
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.128 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,515,656
Number of Sequences: 37866
Number of extensions: 273652
Number of successful extensions: 1079
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 707
Number of HSP's gapped (non-prelim): 246
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.