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Search of human proteins with 19743813
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens]
(798 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens] 1682 0.0
gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens] 1682 0.0
gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens] 1661 0.0
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] 1640 0.0
gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens] 1640 0.0
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] 1640 0.0
gi|188595677 integrin, beta 2 precursor [Homo sapiens] 730 0.0
gi|89191865 integrin, beta 2 precursor [Homo sapiens] 730 0.0
gi|4504777 integrin, beta 7 [Homo sapiens] 702 0.0
gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens] 701 0.0
gi|9625002 integrin, beta 6 [Homo sapiens] 668 0.0
gi|20127446 integrin, beta 5 [Homo sapiens] 652 0.0
gi|4504779 integrin, beta 8 precursor [Homo sapiens] 474 e-133
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 447 e-125
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] 447 e-125
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] 447 e-125
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ... 126 7e-29
gi|157384973 tenascin R [Homo sapiens] 77 6e-14
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 75 2e-13
gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens] 74 7e-13
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens] 72 2e-12
gi|148833508 notch1 preproprotein [Homo sapiens] 72 2e-12
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 72 3e-12
gi|153946395 tenascin C precursor [Homo sapiens] 69 1e-11
gi|62988324 tenascin N [Homo sapiens] 69 1e-11
gi|24041035 notch 2 preproprotein [Homo sapiens] 68 4e-11
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens] 67 7e-11
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens] 67 7e-11
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens] 67 7e-11
gi|38788416 laminin, alpha 1 precursor [Homo sapiens] 60 8e-09
>gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 1682 bits (4357), Expect = 0.0
Identities = 798/798 (100%), Positives = 798/798 (100%)
Query: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
Sbjct: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
Query: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV
Sbjct: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
Query: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF
Sbjct: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
Query: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR
Sbjct: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
Query: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
Sbjct: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
Query: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
Sbjct: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
Query: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI
Sbjct: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
Query: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG
Sbjct: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
Query: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK
Sbjct: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
Query: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE
Sbjct: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
Query: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT
Sbjct: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
Query: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN
Sbjct: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
Query: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN 780
PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN
Sbjct: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN 780
Query: 781 PIYKSAVTTVVNPKYEGK 798
PIYKSAVTTVVNPKYEGK
Sbjct: 781 PIYKSAVTTVVNPKYEGK 798
>gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 1682 bits (4357), Expect = 0.0
Identities = 798/798 (100%), Positives = 798/798 (100%)
Query: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
Sbjct: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
Query: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV
Sbjct: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
Query: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF
Sbjct: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
Query: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR
Sbjct: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
Query: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
Sbjct: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
Query: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
Sbjct: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
Query: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI
Sbjct: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
Query: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG
Sbjct: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
Query: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK
Sbjct: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
Query: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE
Sbjct: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
Query: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT
Sbjct: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
Query: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN
Sbjct: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
Query: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN 780
PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN
Sbjct: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN 780
Query: 781 PIYKSAVTTVVNPKYEGK 798
PIYKSAVTTVVNPKYEGK
Sbjct: 781 PIYKSAVTTVVNPKYEGK 798
>gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens]
Length = 801
Score = 1661 bits (4302), Expect = 0.0
Identities = 788/798 (98%), Positives = 789/798 (98%)
Query: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
Sbjct: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
Query: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV
Sbjct: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
Query: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF
Sbjct: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
Query: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR
Sbjct: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
Query: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
Sbjct: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
Query: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
Sbjct: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
Query: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI
Sbjct: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
Query: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG
Sbjct: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
Query: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK
Sbjct: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
Query: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE
Sbjct: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
Query: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT
Sbjct: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
Query: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN
Sbjct: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
Query: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN 780
PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT EN
Sbjct: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN 780
Query: 781 PIYKSAVTTVVNPKYEGK 798
PIYKS + NP Y K
Sbjct: 781 PIYKSPINNFKNPNYGRK 798
>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
Length = 825
Score = 1640 bits (4246), Expect = 0.0
Identities = 777/777 (100%), Positives = 777/777 (100%)
Query: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
Sbjct: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
Query: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV
Sbjct: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
Query: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF
Sbjct: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
Query: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR
Sbjct: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
Query: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
Sbjct: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
Query: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
Sbjct: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
Query: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI
Sbjct: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
Query: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG
Sbjct: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
Query: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK
Sbjct: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
Query: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE
Sbjct: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
Query: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT
Sbjct: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
Query: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN
Sbjct: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
Query: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT 777
PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT
Sbjct: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT 777
>gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens]
Length = 789
Score = 1640 bits (4246), Expect = 0.0
Identities = 777/777 (100%), Positives = 777/777 (100%)
Query: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
Sbjct: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
Query: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV
Sbjct: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
Query: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF
Sbjct: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
Query: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR
Sbjct: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
Query: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
Sbjct: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
Query: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
Sbjct: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
Query: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI
Sbjct: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
Query: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG
Sbjct: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
Query: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK
Sbjct: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
Query: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE
Sbjct: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
Query: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT
Sbjct: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
Query: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN
Sbjct: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
Query: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT 777
PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT
Sbjct: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT 777
>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
Length = 819
Score = 1640 bits (4246), Expect = 0.0
Identities = 777/777 (100%), Positives = 777/777 (100%)
Query: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
Sbjct: 1 MNLQPIFWIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT 60
Query: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV
Sbjct: 61 SARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLV 120
Query: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF
Sbjct: 121 LRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF 180
Query: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR
Sbjct: 181 RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQR 240
Query: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
Sbjct: 241 ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ 300
Query: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
Sbjct: 301 CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL 360
Query: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI
Sbjct: 361 SANSSNVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISI 420
Query: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG
Sbjct: 421 GDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEG 480
Query: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK
Sbjct: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK 540
Query: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE
Sbjct: 541 RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCE 600
Query: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT
Sbjct: 601 ASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT 660
Query: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN
Sbjct: 661 CTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVEN 720
Query: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT 777
PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT
Sbjct: 721 PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT 777
>gi|188595677 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 730 bits (1884), Expect = 0.0
Identities = 363/791 (45%), Positives = 491/791 (62%), Gaps = 40/791 (5%)
Query: 9 IGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLE 68
+GL+S + CV +Q C K SC ECI++GP C WC F G P S RCD
Sbjct: 12 VGLLS-LGCVLSQ----ECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRP 66
Query: 69 ALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEP 128
L +GC DDI +P + +++ N + Q+ PQ++ L LR G+
Sbjct: 67 QLLMRGCAADDIMDPTSLAETQEDHNGGQK--------------QLSPQKVTLYLRPGQA 112
Query: 129 QTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFV 188
F + F+RA+ YPIDLYYLMDLSYSM DDL NVK LG DL+ + IT RIGFGSFV
Sbjct: 113 AAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFV 172
Query: 189 EKTVMPYISTTPAKLRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDS 247
+KTV+P+++T P KLRNPC + E+ C PF++++VL LTN F VGKQ ISGNLD+
Sbjct: 173 DKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDA 232
Query: 248 PEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNM 307
PEGG DA+MQVA C IGWRNVTRLLVF+TD GFHFAGDGKLG I+ PNDG+CHLE+N+
Sbjct: 233 PEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNL 292
Query: 308 YTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNV 367
Y S+ +DYPS+ L KL+ENNIQ IFAVT Y++L +IPKSAVG LS +SSNV
Sbjct: 293 YKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNV 352
Query: 368 IQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFE 427
+QLI +AYN LSS V L++ L + + ++Y S+C NGV + C + I + F+
Sbjct: 353 VQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQ 412
Query: 428 ISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECG 487
+ +T+ +C ++ SF IR LGFT+ V V + CEC C+ + S CH G G ECG
Sbjct: 413 VKVTATECIQE--QSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS-LCH-GKGFLECG 468
Query: 488 ACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEI 547
CRC+ G +G++CEC T +S++++ CRK+N+S ICS G+CVCGQC+C D ++
Sbjct: 469 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKL 528
Query: 548 YSGKFCECDNFNCDRSNGLICG--GNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQ 605
G++CECD NC+R NG +CG G G+C C C C+P + GSAC C T C
Sbjct: 529 IYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRV 588
Query: 606 ICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQEC 665
C+GRG C C VC+C +Q C+ C C C ++ C +C F KG C+ C
Sbjct: 589 ECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC 647
Query: 666 SYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTY-SVNGNNEVMVHVVENPECP 724
++ P CKE+D + CW +T +G + +++V E+ EC
Sbjct: 648 PGLQLSN-----------NPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECV 696
Query: 725 TGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYK 784
GP+I IV G VAGIVLIG+ LL+IWK L+ + D RE+ +FEKEK+ ++W+ +NP++K
Sbjct: 697 AGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFK 755
Query: 785 SAVTTVVNPKY 795
SA TTV+NPK+
Sbjct: 756 SATTTVMNPKF 766
>gi|89191865 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 730 bits (1884), Expect = 0.0
Identities = 363/791 (45%), Positives = 491/791 (62%), Gaps = 40/791 (5%)
Query: 9 IGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLE 68
+GL+S + CV +Q C K SC ECI++GP C WC F G P S RCD
Sbjct: 12 VGLLS-LGCVLSQ----ECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRP 66
Query: 69 ALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEP 128
L +GC DDI +P + +++ N + Q+ PQ++ L LR G+
Sbjct: 67 QLLMRGCAADDIMDPTSLAETQEDHNGGQK--------------QLSPQKVTLYLRPGQA 112
Query: 129 QTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFV 188
F + F+RA+ YPIDLYYLMDLSYSM DDL NVK LG DL+ + IT RIGFGSFV
Sbjct: 113 AAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFV 172
Query: 189 EKTVMPYISTTPAKLRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDS 247
+KTV+P+++T P KLRNPC + E+ C PF++++VL LTN F VGKQ ISGNLD+
Sbjct: 173 DKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDA 232
Query: 248 PEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNM 307
PEGG DA+MQVA C IGWRNVTRLLVF+TD GFHFAGDGKLG I+ PNDG+CHLE+N+
Sbjct: 233 PEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNL 292
Query: 308 YTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNV 367
Y S+ +DYPS+ L KL+ENNIQ IFAVT Y++L +IPKSAVG LS +SSNV
Sbjct: 293 YKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNV 352
Query: 368 IQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFE 427
+QLI +AYN LSS V L++ L + + ++Y S+C NGV + C + I + F+
Sbjct: 353 VQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQ 412
Query: 428 ISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECG 487
+ +T+ +C ++ SF IR LGFT+ V V + CEC C+ + S CH G G ECG
Sbjct: 413 VKVTATECIQE--QSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS-LCH-GKGFLECG 468
Query: 488 ACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEI 547
CRC+ G +G++CEC T +S++++ CRK+N+S ICS G+CVCGQC+C D ++
Sbjct: 469 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKL 528
Query: 548 YSGKFCECDNFNCDRSNGLICG--GNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQ 605
G++CECD NC+R NG +CG G G+C C C C+P + GSAC C T C
Sbjct: 529 IYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRV 588
Query: 606 ICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQEC 665
C+GRG C C VC+C +Q C+ C C C ++ C +C F KG C+ C
Sbjct: 589 ECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC 647
Query: 666 SYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTY-SVNGNNEVMVHVVENPECP 724
++ P CKE+D + CW +T +G + +++V E+ EC
Sbjct: 648 PGLQLSN-----------NPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECV 696
Query: 725 TGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYK 784
GP+I IV G VAGIVLIG+ LL+IWK L+ + D RE+ +FEKEK+ ++W+ +NP++K
Sbjct: 697 AGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFK 755
Query: 785 SAVTTVVNPKY 795
SA TTV+NPK+
Sbjct: 756 SATTTVMNPKF 766
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 702 bits (1812), Expect = 0.0
Identities = 347/770 (45%), Positives = 489/770 (63%), Gaps = 31/770 (4%)
Query: 32 AKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGSKDIKK 91
A SC +CI + P+C WC F G + RC E L +GCP +++E PRG +++ +
Sbjct: 48 APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQ 107
Query: 92 NKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMDL 151
++ ++ ++G E TQ+ PQ++ + LR GEPQ ++F RAE YP+DLYYLMDL
Sbjct: 108 DQPLSQGARG-------EGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDL 160
Query: 152 SYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPC-TSE 210
SYSMKDDLE V+ LG L+ ++ +T RIGFGSFV+KTV+P++ST P+KLR+PC T
Sbjct: 161 SYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRL 220
Query: 211 QNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNV 270
+ C SPFS+ +VLSLT + F VG+Q +SGNLDSPEGGFDAI+Q A+C IGWRNV
Sbjct: 221 ERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNV 280
Query: 271 TRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENN-MYTMSHYYDYPSIAHLVQKLSEN 329
+RLLVF++D FH AGDGKLGGI +P+DG CHL++N +Y+ S +DYPS+ + Q LS
Sbjct: 281 SRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAA 340
Query: 330 NIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENGKL 389
NIQ IFAVT PVY+EL LIPKSAVG LS +SSNV+QLI+DAYNSLSS V LE+ L
Sbjct: 341 NIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSL 400
Query: 390 SEGVTISYKSYCKNGV--NGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRP 447
GV ISY+S C+ G E+ +C+++ I V F +S+ + C + ++R
Sbjct: 401 PPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC-LPEPHLLRLRA 459
Query: 448 LGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEV 507
LGF+EE+ V L +C+C C S+ P++P C +G G +CG C C GR+GR CECS E+
Sbjct: 460 LGFSEELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAEL 518
Query: 508 NSEDMDAYCRKEN-SSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGL 566
+S D+++ CR N + +CS G C CG+C C + SG CECD+ +C+R G+
Sbjct: 519 SSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGI 572
Query: 567 ICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQ 626
+CGG G C+C VC C+ N TG AC+CS D +C + G +C+G G C+C C+C D +
Sbjct: 573 LCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYY 631
Query: 627 GQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPD 686
G C+ C C C H++C +C AF G C+ C++ N+T + P+ D
Sbjct: 632 GALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALA------PILDD 685
Query: 687 PVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVLIGLA 746
CKE+ +D+ F+F + V++ V P+ IV G V GIV +GL
Sbjct: 686 --GWCKERTLDNQLFFFLVEDDARGTVVLRV--RPQEKGADHTQAIVLGCVGGIVAVGLG 741
Query: 747 LLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYE 796
L+L ++L + I+DRRE+++FEKE+ W NP+YKSA+TT +NP+++
Sbjct: 742 LVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRFQ 791
>gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens]
Length = 788
Score = 701 bits (1810), Expect = 0.0
Identities = 350/778 (44%), Positives = 485/778 (62%), Gaps = 24/778 (3%)
Query: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT-SARCDDLEALKKKGCPPDDIENP 83
N C SC +C+ P C WC++ E +P S RCD E L K C P+ IE P
Sbjct: 29 NICTTRGVSSCQQCLAVSPMCAWCSD-----EALPLGSPRCDLKENLLKDNCAPESIEFP 83
Query: 84 RGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPI 143
+ +++ ++++ G + + +TQ+ PQ++ LRLR + + F+++ ++ EDYP+
Sbjct: 84 VSEARVLEDRPLSDKGSGDSSQ-----VTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPV 138
Query: 144 DLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK- 202
D+YYLMDLSYSMKDDL ++++LGT L +MR++TS+ RIGFG+FV+K V PY+ +P +
Sbjct: 139 DIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEA 198
Query: 203 LRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVC 261
L NPC + C F YK+VL+LT++ FNE V KQ +S N D+PEGGFDAIMQ VC
Sbjct: 199 LENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVC 258
Query: 262 GSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYPSI 319
IGWRN + LLVF+TDA H A DG+L GIV PNDGQCH+ +N Y+ S DYPS+
Sbjct: 259 DEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSL 318
Query: 320 AHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLS 379
+ +KLS+ NI IFAVTE +Y+ LIP + VG LS +SSNV+QLI+DAY +
Sbjct: 319 GLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIR 378
Query: 380 SEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKD 439
S+V LE L E +++S+ + C N N + C + IGD V F I CP++
Sbjct: 379 SKVELEVRDLPEELSLSFNATCLN--NEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEK 436
Query: 440 SDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRH 499
SF I+P+GF + + V + + C+C CQ++ P S +C+ GNGTFECG CRC G +G
Sbjct: 437 EKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQ 496
Query: 500 CECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFN 559
CECS ++ D C +CS GEC+CGQCVC D +GK+CECD+F+
Sbjct: 497 CECSEEDYRPSQQDE-CSPREGQPVCSQRGECLCGQCVCHSSDFGK--ITGKYCECDDFS 553
Query: 560 CDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCK 619
C R G +C G+G C C C C+ ++TG C+C+ T TC +SNG +C+GRG CECG C
Sbjct: 554 CVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCV 613
Query: 620 CTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKL 679
C P G TCE C TC C KECV+C+ F++G D T C+ + ++ES +L
Sbjct: 614 CIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENT--CNRYCRDEIESVKEL 671
Query: 680 PQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAG 739
+ D V +C K+ DDC F Y + + + +++VVE PECP GPDI+ ++ V+
Sbjct: 672 -KDTGKDAV-NCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGA 729
Query: 740 IVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEG 797
I+LIGLA LLIWKLL+ IHDR+EFAKFE+E+ AKWDT NP+YK A +T N Y G
Sbjct: 730 ILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 787
>gi|9625002 integrin, beta 6 [Homo sapiens]
Length = 788
Score = 668 bits (1723), Expect = 0.0
Identities = 330/774 (42%), Positives = 460/774 (59%), Gaps = 25/774 (3%)
Query: 27 CLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGS 86
C A++C +C+ GP C WC F RCD L KGC + IENP
Sbjct: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPS-GVGERCDTPANLLAKGCQLNFIENPVSQ 81
Query: 87 KDIKKNKNVT-NRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDL 145
+I KNK ++ R K ++ DI QI PQ L+L+LR G QT + ++ EDYP+DL
Sbjct: 82 VEILKNKPLSVGRQKNSS------DIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDL 135
Query: 146 YYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRN 205
YYLMDLS SM DDL +K LG+ L EM ++TS+FR+GFGSFVEK V P++ TTP ++ N
Sbjct: 136 YYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIAN 195
Query: 206 PCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSL 264
PC+S C F +K++L LTN E FNE+V Q+IS N+D+PEGGFDAIMQ AVC
Sbjct: 196 PCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEK 255
Query: 265 IGWRNVT-RLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN-NMYTMSHYYDYPSIAHL 322
IGWRN + LLVF +DA HF D KL GIV+PNDG CHL++ N Y+MS +YP+I L
Sbjct: 256 IGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQL 315
Query: 323 VQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEV 382
+ KL +NN+ IFAVT+E +Y+ LIP + VG L +S N++QLII AY L SEV
Sbjct: 316 IDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEV 375
Query: 383 ILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDS 442
LE +EG+ +S+ + C NG ++ +KCS++ +GD F +++ C ++ S
Sbjct: 376 ELEVLGDTEGLNLSFTAICNNGT--LFQHQKKCSHMKVGDTASFSVTVNIPHCERR-SRH 432
Query: 443 FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCEC 502
I+P+G + +E+++ C C+CQ E S KCH GNG+F+CG C C+ G +G CEC
Sbjct: 433 IIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCEC 492
Query: 503 STDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDR 562
D ++++ C++ CS G+C CGQC+C N IY G +C+CDNF+C R
Sbjct: 493 GEDMLSTDS----CKEAPDHPSCSGRGDCYCGQCICHLSPYGN-IY-GPYCQCDNFSCVR 546
Query: 563 SNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTD 622
GL+CGGNG C C C C +TG C+C+ T +C + +G +C+GRG C CG C CT+
Sbjct: 547 HKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTN 606
Query: 623 PKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQP 682
P G TCE C TC C + C++C G+ ++ C +C T E D
Sbjct: 607 PGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEED----- 661
Query: 683 VQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVL 742
D C + ++C F + + + ++H + +CP P+I I+ GV I+L
Sbjct: 662 FSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILL 721
Query: 743 IGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYE 796
IG+ LL IWKLL+ HDR+E AKFE E+ AKW TG NP+Y+ + +T N Y+
Sbjct: 722 IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYK 775
>gi|20127446 integrin, beta 5 [Homo sapiens]
Length = 799
Score = 652 bits (1681), Expect = 0.0
Identities = 337/774 (43%), Positives = 471/774 (60%), Gaps = 28/774 (3%)
Query: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTS--ARCDDLEALKKKGCPPDDIEN 82
N C +A SC EC+ P C WC+ F G P S +RCD L K GC +IE+
Sbjct: 26 NICTSGSATSCEECLLIHPKCAWCSKEDF---GSPRSITSRCDLRANLVKNGCG-GEIES 81
Query: 83 PRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYP 142
P S + ++ ++++ G+A D+ Q+ PQ++ + LR G+ TF L+ ++ EDYP
Sbjct: 82 PASSFHVLRSLPLSSKGSGSAGW----DVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYP 137
Query: 143 IDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK 202
+DLYYLMDLS SMKDDL+N++SLGT L EMR++TS+FR+GFGSFV+K + P+ T P
Sbjct: 138 VDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRY 197
Query: 203 LRNPCTSEQ---NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVA 259
NPC + NC F ++++L LT++ + FNE V KQR+S N D+PEGGFDA++Q A
Sbjct: 198 QTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAA 257
Query: 260 VCGSLIGWR-NVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYP 317
VC IGWR + LLVF+TD H A DGKLGG+V P+DGQCHL E N YT S+ DYP
Sbjct: 258 VCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYP 317
Query: 318 SIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNS 377
S+A L +KL+ENNI IFAVT+ +YK LIP + V L +S N+IQLII+AYNS
Sbjct: 318 SLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNS 377
Query: 378 LSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPK 437
+ S+V L E + + + + C++GV+ G+ RKC + IGD FE+S+ + CP
Sbjct: 378 IRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQ--RKCEGLKIGDTASFEVSLEARSCPS 435
Query: 438 KDSDS-FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRV 496
+ ++ F +RP+GF + +EV + Y C C C P S +C+ G+GT+ CG C C+ G +
Sbjct: 436 RHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN-GSGTYVCGLCECSPGYL 494
Query: 497 GRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECD 556
G CEC E N CR+ +CS G+C C QC C + + +IY G FCECD
Sbjct: 495 GTRCECQDGE-NQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESE-FGKIY-GPFCECD 551
Query: 557 NFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECG 616
NF+C R+ G++C G+G C C C+C+ Y G C+CS D STC +GQIC+ RG C CG
Sbjct: 552 NFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCG 611
Query: 617 VCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGE-KKDTCTQECSYFNITKVES 675
C+CT+P G+ CE C TC C+ ++CV+C + G+ TC C IT V++
Sbjct: 612 QCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDT 671
Query: 676 RDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAG 735
K Q C K DC FTY + + + V+ PEC P+ + I+
Sbjct: 672 IVKDDQ-----EAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLA 726
Query: 736 VVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTT 789
VV I+L+GLALL IWKLL+ IHDRREFAKF+ E+ A+++ NP+Y+ ++T
Sbjct: 727 VVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
>gi|4504779 integrin, beta 8 precursor [Homo sapiens]
Length = 769
Score = 474 bits (1221), Expect = e-133
Identities = 249/647 (38%), Positives = 359/647 (55%), Gaps = 36/647 (5%)
Query: 8 WIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDL 67
W + S+ Q ++NRC +NA SC C+ GP CGWC F+ G S RCD +
Sbjct: 28 WAAWVFSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGS-RSERCDIV 86
Query: 68 EALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGE 127
L KGC D IE P I + TQ+ P ++ ++LR G
Sbjct: 87 SNLISKGCSVDSIEYPSVHVIIPTENEIN---------------TQVTPGEVSIQLRPGA 131
Query: 128 PQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSF 187
F LK + YP+DLYYL+D+S SM +++E + S+G DL +M + DFR+GFGS+
Sbjct: 132 EANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSY 191
Query: 188 VEKTVMPYISTTPAKLRNPCTSEQ-NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLD 246
V+KTV PYIS P ++ N C+ +C P Y +VLSLT F + V +Q+ISGN+D
Sbjct: 192 VDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNID 251
Query: 247 SPEGGFDAIMQVAVCGSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN 305
+PEGGFDA++Q AVC S IGWR RLL+ TD H A D KL GIV+PNDG CHL+N
Sbjct: 252 TPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKN 311
Query: 306 NMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSS 365
N+Y S ++PS+ L +KL +NNI IFAV + YK+L L+P + G + + ++
Sbjct: 312 NVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAA 371
Query: 366 NVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQ 425
N+ L+++AY L SEV ++ +G+ + + C +G G G C N++ DEV
Sbjct: 372 NLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEG--CRNVTSNDEVL 429
Query: 426 FEISITSNKCPKKDSDSFK-IRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTF 484
F +++T KC ++ I+P+GF E ++ + C C+C+ P+ KC + TF
Sbjct: 430 FNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKG-KCVD--ETF 486
Query: 485 ECGAC-RCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDN 543
C +C+E + C D+ +SE C+ +CS G CVCG+C C K
Sbjct: 487 LDSKCFQCDENK----CHFDEDQFSSES----CKSHKDQPVCSGRGVCVCGKCSCHK-IK 537
Query: 544 TNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDC-SLDTSTCEAS 602
++Y GK+CE D+F+C +G +C G+G C+ C+C + G C C S C S
Sbjct: 538 LGKVY-GKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNS 596
Query: 603 NGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQC 649
GQ+C+GRG C CG C+CTDP+ G+ CE C TC C E+ C+QC
Sbjct: 597 KGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQC 643
>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
Length = 1805
Score = 447 bits (1149), Expect = e-125
Identities = 273/749 (36%), Positives = 396/749 (52%), Gaps = 63/749 (8%)
Query: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPR 84
NRC KA KSC EC++ +C +CT+ F RC+ L GC + I
Sbjct: 28 NRCKKAPVKSCTECVRVDKDCAYCTDEMFRDR------RCNTQAELLAAGCQRESIVVME 81
Query: 85 GSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPID 144
S I + + + + Q+ PQ L +RLR GE + F L+ + P+D
Sbjct: 82 SSFQITEETQIDTTLRRS----------QMSPQGLRVRLRPGEERHFELEVFEPLESPVD 131
Query: 145 LYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLR 204
LY LMD S SM DDL+N+K +G +L + ++TSD+ IGFG FV+K +P P KL+
Sbjct: 132 LYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDKVSVPQTDMRPEKLK 191
Query: 205 NPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSL 264
P N PFS+KNV+SLT + F + +RISGNLD+PEGGFDAI+Q AVC
Sbjct: 192 EPW---PNSDPPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPEGGFDAILQTAVCTRD 248
Query: 265 IGWR-NVTRLLVFSTDAGFHFAGDGK--LGGIVLPNDGQCHLE-NNMYTMSHYYDYPSIA 320
IGWR + T LLVFST++ FH+ DG L GI+ ND +CHL+ YT DYPS+
Sbjct: 249 IGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVP 308
Query: 321 HLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSS 380
LV+ L+++NI IFAVT Y++L P S++G L +SSN+++L+ +A+N + S
Sbjct: 309 TLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRS 368
Query: 381 EVILENGKLSEGV--TISYKSYCKNGVNG----TGENGRKCSNISIGDEVQFEISITSNK 434
+ + G+ ++ K + K GE G + + V +
Sbjct: 369 NLDIRALDSPRGLRTEVTSKMFQKTRTGSFHIRRGEVGIYQVQLRALEHVD---GTHVCQ 425
Query: 435 CPKKDSDSFKIRPLGFTEEVEVILQYICE-CECQSEGIPESPKCHEGNGTFECGACRCNE 493
P+ + ++P F++ +++ IC+ C C+ + S +C NG F CG C C+E
Sbjct: 426 LPEDQKGNIHLKP-SFSDGLKMDAGIICDVCTCELQKEVRSARC-SFNGDFVCGQCVCSE 483
Query: 494 GRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFC 553
G G+ C CST ++ C +E + CS GEC CG CVC Y G+FC
Sbjct: 484 GWSGQTCNCSTGSLSDIQP---CLREGEDKPCSGRGECQCGHCVCYGEGR----YEGQFC 536
Query: 554 ECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGIC 613
E DNF C R++G +C G C C C P +TG +CDC L +TC SNG ICNGRG C
Sbjct: 537 EYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNATCIDSNGGICNGRGHC 596
Query: 614 ECGVCKCTDPKFQGQT-CEMCQTCL--GVCAEHKECVQCRAFNKGEKKDTCTQECSYFNI 670
ECG C C T CE+ + + G+C + + CVQC+A+ GEKK +EC++
Sbjct: 597 ECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGEKKGRTCEECNF--- 653
Query: 671 TKVESRDKLPQPVQPDPVSHCKEKDV-DDCWFYFTYSVNG----NNEVMVHVVENPECPT 725
KV+ D+L + + V C +D DDC + +T +G N+ V+VH + +CP
Sbjct: 654 -KVKMVDELKR--AEEVVVRCSFRDEDDDCTYSYTMEGDGAPGPNSTVLVH--KKKDCPP 708
Query: 726 GPD--IIPIVAGVVAGIVLIGLALLLIWK 752
G +IP+ ++ + L+ L LLL WK
Sbjct: 709 GSFWWLIPL---LLLLLPLLALLLLLCWK 734
>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
Length = 1822
Score = 447 bits (1149), Expect = e-125
Identities = 273/749 (36%), Positives = 396/749 (52%), Gaps = 63/749 (8%)
Query: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPR 84
NRC KA KSC EC++ +C +CT+ F RC+ L GC + I
Sbjct: 28 NRCKKAPVKSCTECVRVDKDCAYCTDEMFRDR------RCNTQAELLAAGCQRESIVVME 81
Query: 85 GSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPID 144
S I + + + + Q+ PQ L +RLR GE + F L+ + P+D
Sbjct: 82 SSFQITEETQIDTTLRRS----------QMSPQGLRVRLRPGEERHFELEVFEPLESPVD 131
Query: 145 LYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLR 204
LY LMD S SM DDL+N+K +G +L + ++TSD+ IGFG FV+K +P P KL+
Sbjct: 132 LYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDKVSVPQTDMRPEKLK 191
Query: 205 NPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSL 264
P N PFS+KNV+SLT + F + +RISGNLD+PEGGFDAI+Q AVC
Sbjct: 192 EPW---PNSDPPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPEGGFDAILQTAVCTRD 248
Query: 265 IGWR-NVTRLLVFSTDAGFHFAGDGK--LGGIVLPNDGQCHLE-NNMYTMSHYYDYPSIA 320
IGWR + T LLVFST++ FH+ DG L GI+ ND +CHL+ YT DYPS+
Sbjct: 249 IGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVP 308
Query: 321 HLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSS 380
LV+ L+++NI IFAVT Y++L P S++G L +SSN+++L+ +A+N + S
Sbjct: 309 TLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRS 368
Query: 381 EVILENGKLSEGV--TISYKSYCKNGVNG----TGENGRKCSNISIGDEVQFEISITSNK 434
+ + G+ ++ K + K GE G + + V +
Sbjct: 369 NLDIRALDSPRGLRTEVTSKMFQKTRTGSFHIRRGEVGIYQVQLRALEHVD---GTHVCQ 425
Query: 435 CPKKDSDSFKIRPLGFTEEVEVILQYICE-CECQSEGIPESPKCHEGNGTFECGACRCNE 493
P+ + ++P F++ +++ IC+ C C+ + S +C NG F CG C C+E
Sbjct: 426 LPEDQKGNIHLKP-SFSDGLKMDAGIICDVCTCELQKEVRSARC-SFNGDFVCGQCVCSE 483
Query: 494 GRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFC 553
G G+ C CST ++ C +E + CS GEC CG CVC Y G+FC
Sbjct: 484 GWSGQTCNCSTGSLSDIQP---CLREGEDKPCSGRGECQCGHCVCYGEGR----YEGQFC 536
Query: 554 ECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGIC 613
E DNF C R++G +C G C C C P +TG +CDC L +TC SNG ICNGRG C
Sbjct: 537 EYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNATCIDSNGGICNGRGHC 596
Query: 614 ECGVCKCTDPKFQGQT-CEMCQTCL--GVCAEHKECVQCRAFNKGEKKDTCTQECSYFNI 670
ECG C C T CE+ + + G+C + + CVQC+A+ GEKK +EC++
Sbjct: 597 ECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGEKKGRTCEECNF--- 653
Query: 671 TKVESRDKLPQPVQPDPVSHCKEKDV-DDCWFYFTYSVNG----NNEVMVHVVENPECPT 725
KV+ D+L + + V C +D DDC + +T +G N+ V+VH + +CP
Sbjct: 654 -KVKMVDELKR--AEEVVVRCSFRDEDDDCTYSYTMEGDGAPGPNSTVLVH--KKKDCPP 708
Query: 726 GPD--IIPIVAGVVAGIVLIGLALLLIWK 752
G +IP+ ++ + L+ L LLL WK
Sbjct: 709 GSFWWLIPL---LLLLLPLLALLLLLCWK 734
>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
Length = 1752
Score = 447 bits (1149), Expect = e-125
Identities = 273/749 (36%), Positives = 396/749 (52%), Gaps = 63/749 (8%)
Query: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPR 84
NRC KA KSC EC++ +C +CT+ F RC+ L GC + I
Sbjct: 28 NRCKKAPVKSCTECVRVDKDCAYCTDEMFRDR------RCNTQAELLAAGCQRESIVVME 81
Query: 85 GSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPID 144
S I + + + + Q+ PQ L +RLR GE + F L+ + P+D
Sbjct: 82 SSFQITEETQIDTTLRRS----------QMSPQGLRVRLRPGEERHFELEVFEPLESPVD 131
Query: 145 LYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLR 204
LY LMD S SM DDL+N+K +G +L + ++TSD+ IGFG FV+K +P P KL+
Sbjct: 132 LYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDKVSVPQTDMRPEKLK 191
Query: 205 NPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSL 264
P N PFS+KNV+SLT + F + +RISGNLD+PEGGFDAI+Q AVC
Sbjct: 192 EPW---PNSDPPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPEGGFDAILQTAVCTRD 248
Query: 265 IGWR-NVTRLLVFSTDAGFHFAGDGK--LGGIVLPNDGQCHLE-NNMYTMSHYYDYPSIA 320
IGWR + T LLVFST++ FH+ DG L GI+ ND +CHL+ YT DYPS+
Sbjct: 249 IGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVP 308
Query: 321 HLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSS 380
LV+ L+++NI IFAVT Y++L P S++G L +SSN+++L+ +A+N + S
Sbjct: 309 TLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRS 368
Query: 381 EVILENGKLSEGV--TISYKSYCKNGVNG----TGENGRKCSNISIGDEVQFEISITSNK 434
+ + G+ ++ K + K GE G + + V +
Sbjct: 369 NLDIRALDSPRGLRTEVTSKMFQKTRTGSFHIRRGEVGIYQVQLRALEHVD---GTHVCQ 425
Query: 435 CPKKDSDSFKIRPLGFTEEVEVILQYICE-CECQSEGIPESPKCHEGNGTFECGACRCNE 493
P+ + ++P F++ +++ IC+ C C+ + S +C NG F CG C C+E
Sbjct: 426 LPEDQKGNIHLKP-SFSDGLKMDAGIICDVCTCELQKEVRSARC-SFNGDFVCGQCVCSE 483
Query: 494 GRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFC 553
G G+ C CST ++ C +E + CS GEC CG CVC Y G+FC
Sbjct: 484 GWSGQTCNCSTGSLSDIQP---CLREGEDKPCSGRGECQCGHCVCYGEGR----YEGQFC 536
Query: 554 ECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGIC 613
E DNF C R++G +C G C C C P +TG +CDC L +TC SNG ICNGRG C
Sbjct: 537 EYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNATCIDSNGGICNGRGHC 596
Query: 614 ECGVCKCTDPKFQGQT-CEMCQTCL--GVCAEHKECVQCRAFNKGEKKDTCTQECSYFNI 670
ECG C C T CE+ + + G+C + + CVQC+A+ GEKK +EC++
Sbjct: 597 ECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGEKKGRTCEECNF--- 653
Query: 671 TKVESRDKLPQPVQPDPVSHCKEKDV-DDCWFYFTYSVNG----NNEVMVHVVENPECPT 725
KV+ D+L + + V C +D DDC + +T +G N+ V+VH + +CP
Sbjct: 654 -KVKMVDELKR--AEEVVVRCSFRDEDDDCTYSYTMEGDGAPGPNSTVLVH--KKKDCPP 708
Query: 726 GPD--IIPIVAGVVAGIVLIGLALLLIWK 752
G +IP+ ++ + L+ L LLL WK
Sbjct: 709 GSFWWLIPL---LLLLLPLLALLLLLCWK 734
>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
[Homo sapiens]
Length = 494
Score = 126 bits (317), Expect = 7e-29
Identities = 83/265 (31%), Positives = 117/265 (44%), Gaps = 48/265 (18%)
Query: 461 ICECECQSEGIPESP--KCHE------------GNGTFECGACRCNEGRVGRHCECSTD- 505
+C C G+ P +CHE G+G +CG C+C++G G C+ T+
Sbjct: 73 VCICHVTEPGMFFGPLCECHEWVCETYDGSTCAGHGKCDCGKCKCDQGWYGDACQYPTNC 132
Query: 506 EVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNC-DRSN 564
++ + + C K + ICSN G C CG+C C D + +Y GKFCECD+ C D
Sbjct: 133 DLTKKKSNQMC-KNSQDIICSNAGTCHCGRCKCDNSDGSGLVY-GKFCECDDRECIDDET 190
Query: 565 GLICGGNGVCKCRVCECNPNYTGSACDCSLDTS------TCEASNGQICNGRGICECGVC 618
ICGG+G C C C C + G C+ D + C + +G+IC+ RG C CG C
Sbjct: 191 EEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRCTSPDGKICSNRGTCVCGEC 250
Query: 619 KCTD-------PKFQGQTCEMCQ-TCLGV--------CAEHKEC----VQCRA---FNKG 655
C D G TCE + C V C+ H +C C+A K
Sbjct: 251 TCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKKC 310
Query: 656 EKKDTCTQECSYFNITKVESRDKLP 680
E +CT +I K + LP
Sbjct: 311 EHPQSCTLSAEE-SIRKCQGSSDLP 334
Score = 118 bits (295), Expect = 2e-26
Identities = 71/207 (34%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 462 CECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENS 521
CEC+ + E+ + G+G CG C C G G CE D + + C +
Sbjct: 178 CECDDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCD-ITPWESKRRCTSPDG 236
Query: 522 SEICSNNGECVCGQCVCRKRDNTNE--IYSGKFCECDNFNC----DRSNGLICGGNGVCK 575
+ICSN G CVCG+C C D T + G CECD +C DR + C G+G C
Sbjct: 237 -KICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQCN 295
Query: 576 CRVCECNPNYTGSACD----CSLDTS----TCEASNGQICNGRGICECGVCKCTDP---K 624
C C+C + G C+ C+L C+ S+ C+GRG CECG C C P +
Sbjct: 296 CGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPPGDRR 355
Query: 625 FQGQTCE----MCQTCLG-VCAEHKEC 646
G+TCE C+ G VC H C
Sbjct: 356 VYGKTCECDDRRCEDLDGVVCGGHGTC 382
Score = 113 bits (283), Expect = 6e-25
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 462 CECE---CQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTD-EVNSEDMDAYCR 517
CEC+ C++ S G+G CG C C G G+ CE +++E+ C
Sbjct: 269 CECDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKC- 327
Query: 518 KENSSEI-CSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKC 576
+ SS++ CS G+C CG+C C + +Y GK CECD+ C+ +G++CGG+G C C
Sbjct: 328 -QGSSDLPCSGRGKCECGKCTCYPPGD-RRVY-GKTCECDDRRCEDLDGVVCGGHGTCSC 384
Query: 577 RVCECNPNYTGSACD----CSL----DTSTCEASNGQICNGRGICECGVCKCTDPKF--Q 626
C C + G C C++ + CE+++G +C+G+G C CG C C+ ++
Sbjct: 385 GRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESADGILCSGKGSCHCGKCICSAEEWYIS 444
Query: 627 GQTCE 631
G+ C+
Sbjct: 445 GEFCD 449
Score = 102 bits (254), Expect = 1e-21
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 462 CECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCE----CSTDEVNSEDMDAYCR 517
CEC+ + + C G+GT CG C C G G+ C+ C+ E S+++ C
Sbjct: 361 CECDDRRCEDLDGVVCG-GHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNL---CE 416
Query: 518 KENSSEICSNNGECVCGQCVCRKRDNTNEIY-SGKFCECDNFNCDRSNGLICGGNGVCKC 576
+ +CS G C CG+C+C + E Y SG+FC+CD+ +CD+ +GLIC GNG+C C
Sbjct: 417 SADGI-LCSGKGSCHCGKCIC----SAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSC 471
Query: 577 RVCECNPNYTGSACD 591
CEC + G+AC+
Sbjct: 472 GNCECWDGWNGNACE 486
Score = 89.4 bits (220), Expect = 1e-17
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 524 ICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNP 583
+C G C CG C+C + ++ G CEC + C+ +G C G+G C C C+C+
Sbjct: 62 LCHGRGRCDCGVCICHVTEPG--MFFGPLCECHEWVCETYDGSTCAGHGKCDCGKCKCDQ 119
Query: 584 NYTGSAC----DCSL----DTSTCEASNGQICNGRGICECGVCKCTDPK----FQGQTCE 631
+ G AC +C L C+ S IC+ G C CG CKC + G+ CE
Sbjct: 120 GWYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCDNSDGSGLVYGKFCE 179
Query: 632 M-CQTCLG-----VCAEHKECVQCRAFNK-GEKKDTCTQECSYFNITKVESRDKLPQP 682
+ C+ +C H +C + K G D C +C +IT ES+ + P
Sbjct: 180 CDDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQC---DITPWESKRRCTSP 234
>gi|157384973 tenascin R [Homo sapiens]
Length = 1358
Score = 77.0 bits (188), Expect = 6e-14
Identities = 72/282 (25%), Positives = 101/282 (35%), Gaps = 73/282 (25%)
Query: 393 VTISYKSYCKNGVNGTGENGRKCSNISIGD----------EVQF--EISITSNKCPKKDS 440
+ + + C +G+ + E + ++ + +V F I+ CP S
Sbjct: 71 INVPLDNLCSSGLEASAEQEVSAEDETLAEYMGQTSDHESQVTFTHRINFPKKACPCASS 130
Query: 441 DSFKIRPLGFTEEVE---VILQYICECECQSEGIPES-----PKCH-EGNGTFECGACRC 491
L E +E +L+ C C E P C GN +FE C C
Sbjct: 131 AQVLQELLSRIEMLEREVSVLRDQCNANCCQESAATGQLDYIPHCSGHGNFSFESCGCIC 190
Query: 492 NEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGK 551
NEG G++C + YC CS+ G CV GQC+C + YSG
Sbjct: 191 NEGWFGKNCS-----------EPYCPLG-----CSSRGVCVDGQCIC------DSEYSGD 228
Query: 552 FCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSAC-------DCS----LDTSTCE 600
+C C C G+C C C YTG C DCS TC
Sbjct: 229 --DCSELRCPTD----CSSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGRCANGTCL 282
Query: 601 ASNGQI------------CNGRGICECGVCKCTDPKFQGQTC 630
G + C+GRG CE G+C C + +QG C
Sbjct: 283 CEEGYVGEDCGQRQCLNACSGRGQCEEGLCVC-EEGYQGPDC 323
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 75.5 bits (184), Expect = 2e-13
Identities = 58/193 (30%), Positives = 78/193 (40%), Gaps = 48/193 (24%)
Query: 461 ICECEC----QSEGIPESPKCHEGNGTFECGACRCNEGRVGRHC---ECSTDEVNSEDMD 513
+C C + G+ P G G E G C C G GR C C D
Sbjct: 449 VCVCNAGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYTGRDCGTRACPGD-------- 500
Query: 514 AYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGV 573
C G CV G+CVC N ++G+ +C + C C G+G+
Sbjct: 501 -----------CRGRGRCVDGRCVC------NPGFTGE--DCGSRRCPGD----CRGHGL 537
Query: 574 CKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMC 633
C+ VC C+ Y+G DCS T +C C GRG C G C C D + G+ C +
Sbjct: 538 CEDGVCVCDAGYSGE--DCS--TRSCPGG----CRGRGQCLDGRCVCED-GYSGEDCGVR 588
Query: 634 QTCLGVCAEHKEC 646
Q C C++H C
Sbjct: 589 Q-CPNDCSQHGVC 600
Score = 70.1 bits (170), Expect = 8e-12
Identities = 57/191 (29%), Positives = 71/191 (37%), Gaps = 45/191 (23%)
Query: 475 PKCHEGNGTFECGACRCNEGRVGRHC---ECSTDEVNSEDMDAYCRKENSSEICSNNGEC 531
P+ G G E G C C+ G G C C D C+ G C
Sbjct: 374 PRDCRGRGRCEDGECICDTGYSGDDCGVRSCPGD-------------------CNQRGRC 414
Query: 532 VCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACD 591
G+CVC Y+G +C + C R C G G C+ VC CN Y+G C
Sbjct: 415 EDGRCVCWPG------YTGT--DCGSRACPRD----CRGRGRCENGVCVCNAGYSGEDC- 461
Query: 592 CSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRA 651
+C C GRG CE G C C P + G+ C + C G C CV R
Sbjct: 462 ---GVRSCPGD----CRGRGRCESGRCMCW-PGYTGRDCG-TRACPGDCRGRGRCVDGRC 512
Query: 652 F-NKGEKKDTC 661
N G + C
Sbjct: 513 VCNPGFTGEDC 523
Score = 68.9 bits (167), Expect = 2e-11
Identities = 56/198 (28%), Positives = 76/198 (38%), Gaps = 40/198 (20%)
Query: 470 GIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNG 529
G P P +G G G C C G G C + + CS G
Sbjct: 214 GWPSCPGDCQGRGRCVQGVCVCRAGFSGPDCS----------------QRSCPRGCSQRG 257
Query: 530 ECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSA 589
C G+CVC + Y+G +C +C R C G C+ C CNP YTG
Sbjct: 258 RCEGGRCVC------DPGYTGD--DCGMRSCPRG----CSQRGRCENGRCVCNPGYTGED 305
Query: 590 CDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECV-- 647
C +C C+ RG C+ G C C DP + G+ C ++C C E CV
Sbjct: 306 C----GVRSCPRG----CSQRGRCKDGRCVC-DPGYTGEDCG-TRSCPWDCGEGGRCVDG 355
Query: 648 QCRAFNKGEKKDTCTQEC 665
+C + +D T+ C
Sbjct: 356 RCVCWPGYTGEDCSTRTC 373
Score = 65.9 bits (159), Expect = 1e-10
Identities = 62/218 (28%), Positives = 76/218 (34%), Gaps = 40/218 (18%)
Query: 462 CECECQSEGIPESPKC--HEGNGTFECGACRCNEGRVGR------HCECSTDEVNSEDMD 513
C +C+ G+ E C G +C C G GR C C D + ED
Sbjct: 528 CPGDCRGHGLCEDGVCVCDAGYSGEDCSTRSCPGGCRGRGQCLDGRCVCE-DGYSGED-- 584
Query: 514 AYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGV 573
C CS +G C G C+C + G E + SN C G G
Sbjct: 585 --CGVRQCPNDCSQHGVCQDGVCIC---------WEGYVSEDCSIRTCPSN---CHGRGR 630
Query: 574 CKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEM- 632
C+ C C+P YTG C T C A C GRG C GVC C + G+ C
Sbjct: 631 CEEGRCLCDPGYTGPTC----ATRMCPAD----CRGRGRCVQGVCLC-HVGYGGEDCGQE 681
Query: 633 ---CQTCLGVCAEHKEC--VQCRAFNKGEKKDTCTQEC 665
C G C + C QC D Q C
Sbjct: 682 EPPASACPGGCGPRELCRAGQCVCVEGFRGPDCAIQTC 719
Score = 61.6 bits (148), Expect = 3e-09
Identities = 53/184 (28%), Positives = 74/184 (40%), Gaps = 26/184 (14%)
Query: 481 NGTFECGACRCN--EGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVC 538
+G F+ C C+ G G C TD + + C++ G CV G+CVC
Sbjct: 146 HGVFDLSRCTCSCEPGWGGPTCSDPTD-AEIPPSSPPSASGSCPDDCNDQGRCVRGRCVC 204
Query: 539 RKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTST 598
Y+G C + D C G G C VC C ++G DCS
Sbjct: 205 FPG------YTGPSCGWPSCPGD------CQGRGRCVQGVCVCRAGFSGP--DCS----- 245
Query: 599 CEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAF-NKGEK 657
+ S + C+ RG CE G C C DP + G C M ++C C++ C R N G
Sbjct: 246 -QRSCPRGCSQRGRCEGGRCVC-DPGYTGDDCGM-RSCPRGCSQRGRCENGRCVCNPGYT 302
Query: 658 KDTC 661
+ C
Sbjct: 303 GEDC 306
Score = 55.5 bits (132), Expect = 2e-07
Identities = 48/174 (27%), Positives = 63/174 (36%), Gaps = 42/174 (24%)
Query: 460 YICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCE---CSTDEVNSEDMDAYC 516
Y+ E +C P + CH G G E G C C+ G G C C D
Sbjct: 611 YVSE-DCSIRTCPSN--CH-GRGRCEEGRCLCDPGYTGPTCATRMCPAD----------- 655
Query: 517 RKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKC 576
C G CV G C+C Y G+ C + G CG +C+
Sbjct: 656 --------CRGRGRCVQGVCLCHVG------YGGEDCGQEEPPASACPGG-CGPRELCRA 700
Query: 577 RVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTC 630
C C + G DC++ T + C GRG C G C C D + G+ C
Sbjct: 701 GQCVCVEGFRGP--DCAIQTCPGD------CRGRGECHDGSCVCKD-GYAGEDC 745
>gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens]
Length = 2699
Score = 73.6 bits (179), Expect = 7e-13
Identities = 52/184 (28%), Positives = 73/184 (39%), Gaps = 40/184 (21%)
Query: 469 EGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNN 528
E + E P+ GNG G C C G +G C + V +CS N
Sbjct: 513 ESVVECPRNCHGNGECVSGTCHCFPGFLGPDCSRAACPV----------------LCSGN 556
Query: 529 GECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGS 588
G+ G+C+C + G C+ C CGG G+C C CN Y G
Sbjct: 557 GQYSKGRCLCFSG------WKGTECDVPTTQCIDPQ---CGGRGICIMGSCACNSGYKGE 607
Query: 589 AC---DCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQT-CLGVCAEHK 644
+C DC +D C+ G+C G C C+ P + G CE+ +T C C+ H
Sbjct: 608 SCEEADC-IDPG---------CSNHGVCIHGECHCS-PGWGGSNCEILKTMCPDQCSGHG 656
Query: 645 ECVQ 648
+Q
Sbjct: 657 TYLQ 660
Score = 63.5 bits (153), Expect = 7e-10
Identities = 52/195 (26%), Positives = 73/195 (37%), Gaps = 49/195 (25%)
Query: 475 PKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCG 534
P+C G G G+C CN G G CE +A C CSN+G C+ G
Sbjct: 585 PQCG-GRGICIMGSCACNSGYKGESCE-----------EADCIDPG----CSNHGVCIHG 628
Query: 535 QCVCRK------------------RDNTNEIYSGKFCECDN--FNCDRSNGLI---CGGN 571
+C C + + C CD D SN + CG +
Sbjct: 629 ECHCSPGWGGSNCEILKTMCPDQCSGHGTYLQESGSCTCDPNWTGPDCSNEICSVDCGSH 688
Query: 572 GVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCE 631
GVC C C +TG AC + C C G C+ G C+C+ + G+ C
Sbjct: 689 GVCMGGTCRCEEGWTGPAC----NQRACHPR----CAEHGTCKDGKCECSQ-GWNGEHCT 739
Query: 632 MCQTCLGVCAEHKEC 646
+ + C G+C + C
Sbjct: 740 I-EGCPGLCNSNGRC 753
Score = 49.3 bits (116), Expect = 1e-05
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 48/180 (26%)
Query: 457 ILQYICECECQSEGIPESPKCHEGNGTF--ECGACRCNEGRVGRHCE---CSTD-EVNSE 510
IL+ +C +C G+GT+ E G+C C+ G C CS D +
Sbjct: 643 ILKTMCPDQCS------------GHGTYLQESGSCTCDPNWTGPDCSNEICSVDCGSHGV 690
Query: 511 DMDAYCRKENS-----------SEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFN 559
M CR E C+ +G C G+C C ++ ++G+ C +
Sbjct: 691 CMGGTCRCEEGWTGPACNQRACHPRCAEHGTCKDGKCEC------SQGWNGEHCTIEG-- 742
Query: 560 CDRSNGLICGGNGVCKCRV----CECNPNYTGSACDCSLDTSTCEASNGQICNGRGICEC 615
C +C NG C C C P + G+ CD +++T ++ + + G G+ +C
Sbjct: 743 CPG----LCNSNGRCTLDQNGWHCVCQPGWRGAGCDVAMETLCTDSKDNE---GDGLIDC 795
>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
Length = 2769
Score = 72.4 bits (176), Expect = 2e-12
Identities = 54/180 (30%), Positives = 75/180 (41%), Gaps = 42/180 (23%)
Query: 469 EGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNN 528
E + P GNG G C C G +G C ++ V +CS N
Sbjct: 561 ESVDNCPSNCYGNGDCISGTCHCFLGFLGPDCGRASCPV----------------LCSGN 604
Query: 529 GECVCGQCVCRKRDNTNEIYSG-KFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTG 587
G+ + G+C+C +SG K ECD ++ + C +G C C CNP Y G
Sbjct: 605 GQYMKGRCLC---------HSGWKGAECD-VPTNQCIDVACSNHGTCITGTCICNPGYKG 654
Query: 588 SAC---DCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQ-TCLGVCAEH 643
+C DC T C+GRG+C G C C+ + G CE + TCL C+ H
Sbjct: 655 ESCEEVDCMDPT----------CSGRGVCVRGECHCS-VGWGGTNCETPRATCLDQCSGH 703
Score = 62.0 bits (149), Expect = 2e-09
Identities = 54/240 (22%), Positives = 79/240 (32%), Gaps = 85/240 (35%)
Query: 470 GIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNG 529
G P GNG + G C C+ G G C+ T++ CSN+G
Sbjct: 593 GRASCPVLCSGNGQYMKGRCLCHSGWKGAECDVPTNQC-------------IDVACSNHG 639
Query: 530 ECVCGQCVCR---KRDNTNEI-----------------------YSGKFCECDNFNC-DR 562
C+ G C+C K ++ E+ + G CE C D+
Sbjct: 640 TCITGTCICNPGYKGESCEEVDCMDPTCSGRGVCVRGECHCSVGWGGTNCETPRATCLDQ 699
Query: 563 SNG----------------------------LICGGNGVCKCRVCECNPNYTGSACDCSL 594
+G CGG+GVC C C + G+AC
Sbjct: 700 CSGHGTFLPDTGLCSCDPSWTGHDCSIEICAADCGGHGVCVGGTCRCEDGWMGAAC---- 755
Query: 595 DTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMC--------QTCLGVCAEHKEC 646
D C C G C G C+C+ P + G+ C + + C G+C + C
Sbjct: 756 DQRACHPR----CAEHGTCRDGKCECS-PGWNGEHCTIAHYLDRVVKEGCPGLCNGNGRC 810
Score = 48.9 bits (115), Expect = 2e-05
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 40/168 (23%)
Query: 480 GNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCR 539
G+G G CRC +G +G A C + C+ +G C G+C C
Sbjct: 735 GHGVCVGGTCRCEDGWMG----------------AACDQRACHPRCAEHGTCRDGKCEC- 777
Query: 540 KRDNTNEIYSGKFCECDNFNCDR--SNGL--ICGGNGVCKCRV----CECNPNYTGSACD 591
+ ++G+ C ++ DR G +C GNG C + C C + G+ CD
Sbjct: 778 -----SPGWNGEHCTIAHY-LDRVVKEGCPGLCNGNGRCTLDLNGWHCVCQLGWRGAGCD 831
Query: 592 CSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQ-TCEMCQTCLG 638
S++T+ ++ + +G G+ + C DP Q C + CLG
Sbjct: 832 TSMETACGDSKDN---DGDGLVD-----CMDPDCCLQPLCHINPLCLG 871
>gi|148833508 notch1 preproprotein [Homo sapiens]
Length = 2555
Score = 72.0 bits (175), Expect = 2e-12
Identities = 65/239 (27%), Positives = 93/239 (38%), Gaps = 47/239 (19%)
Query: 422 DEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGN 481
DE + + +C K ++ P GFT + QY + EC S KC +G
Sbjct: 492 DECASSPCLHNGRCLDKINEFQCECPTGFTGH---LCQYDVD-ECASTPCKNGAKCLDGP 547
Query: 482 GTFECGACRCNEGRVGRHCECSTDEVNSED------------MDAYCRKENSSEICSNN- 528
T+ C C EG G HCE DE + + CR + C N
Sbjct: 548 NTY---TCVCTEGYTGTHCEVDIDECDPDPCHYGSCKDGVATFTCLCRPGYTGHHCETNI 604
Query: 529 GECVCGQC----VCRKRDNTNEIY-----SGKFCECDNFNCDRSNGLICGGNGVCKCRV- 578
EC C C+ RDN + +G CE + +C S C +G C ++
Sbjct: 605 NECSSQPCRHGGTCQDRDNAYLCFCLKGTTGPNCEINLDDCASSP---CD-SGTCLDKID 660
Query: 579 ---CECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGV----CKCTDPKFQGQTC 630
C C P YTGS C+ ++D G C+ G CE G+ C+C + + TC
Sbjct: 661 GYECACEPGYTGSMCNINIDECA-----GNPCHNGGTCEDGINGFTCRCPE-GYHDPTC 713
Score = 62.0 bits (149), Expect = 2e-09
Identities = 62/214 (28%), Positives = 79/214 (36%), Gaps = 44/214 (20%)
Query: 465 ECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEI 524
EC S C + T++C C G G HCE + D+ N +D R S
Sbjct: 1186 ECLSHPCQNGGTCLDLPNTYKCS---CPRGTQGVHCEINVDDCN-PPVDPVSR----SPK 1237
Query: 525 CSNNGECVCG----QCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRV-- 578
C NNG CV C C + G+ CE D C SN G C RV
Sbjct: 1238 CFNNGTCVDQVGGYSCTCPPG------FVGERCEGDVNEC-LSNPCDARGTQNCVQRVND 1290
Query: 579 --CECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECG-------VCKCTDPKFQGQT 629
CEC +TG C+ S G+ C G C +CKC F+G T
Sbjct: 1291 FHCECRAGHTGRRCE-----SVINGCKGKPCKNGGTCAVASNTARGFICKC-PAGFEGAT 1344
Query: 630 CEM-CQTCLGV-CAEHKECVQCRAFNKGEKKDTC 661
CE +TC + C C+ G + TC
Sbjct: 1345 CENDARTCGSLRCLNGGTCI------SGPRSPTC 1372
Score = 58.2 bits (139), Expect = 3e-08
Identities = 56/207 (27%), Positives = 76/207 (36%), Gaps = 46/207 (22%)
Query: 465 ECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECS---------------TDEVNS 509
EC C +G + C C G GR+CE TD +N+
Sbjct: 872 ECVLSPCRHGASCQNTHGGYRC---HCQAGYSGRNCETDIDDCRPNPCHNGGSCTDGINT 928
Query: 510 EDMD-------AYCRK---ENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFN 559
D +C + E +S+ C N C CV +SG CE + +
Sbjct: 929 AFCDCLPGFRGTFCEEDINECASDPCRNGANCT--DCVDSYTCTCPAGFSGIHCENNTPD 986
Query: 560 CDRSNGLICGGNGVC----KCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICE- 614
C S+ C G C C C P +TGS C D + C++ Q C G C+
Sbjct: 987 CTESS---CFNGGTCVDGINSFTCLCPPGFTGSY--CQHDVNECDS---QPCLHGGTCQD 1038
Query: 615 -CGVCKCTDPKFQGQTCEMCQTCLGVC 640
CG +CT P QG T CQ + C
Sbjct: 1039 GCGSYRCTCP--QGYTGPNCQNLVHWC 1063
Score = 53.1 bits (126), Expect = 1e-06
Identities = 66/233 (28%), Positives = 80/233 (34%), Gaps = 52/233 (22%)
Query: 477 CHEGNGTFECG----ACRCNEGRVGRHCECSTDEVNSED-MDAYCRKENSSEICS----- 526
CH G GT E G CRC EG C +E NS + CR + C
Sbjct: 687 CHNG-GTCEDGINGFTCRCPEGYHDPTCLSEVNECNSNPCVHGACRDSLNGYKCDCDPGW 745
Query: 527 -------NNGECVCGQCVCRKRDNTNEIYSGKFCEC----------DNFNCDRSNGLICG 569
NN EC CV ++ SG C C N N SN C
Sbjct: 746 SGTNCDINNNECESNPCV--NGGTCKDMTSGYVCTCREGFSGPNCQTNINECASNP--CL 801
Query: 570 GNGVCKCRV----CECNPNYTGSACDCSLDTSTCEAS---NGQICNGRGICECGVCKCTD 622
G C V C C YTG+ C+ L + C S NG C E C C
Sbjct: 802 NQGTCIDDVAGYKCNCLLPYTGATCEVVL--APCAPSPCRNGGECRQSEDYESFSCVC-P 858
Query: 623 PKFQGQTCE--MCQTCLGVCAEHKEC--------VQCRAFNKGEKKDTCTQEC 665
+QGQTCE + + L C C C+A G +T +C
Sbjct: 859 TGWQGQTCEVDINECVLSPCRHGASCQNTHGGYRCHCQAGYSGRNCETDIDDC 911
Score = 52.4 bits (124), Expect = 2e-06
Identities = 71/314 (22%), Positives = 106/314 (33%), Gaps = 67/314 (21%)
Query: 376 NSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKC 435
N S+ L G +G SY+ C G G C N+ KC
Sbjct: 1023 NECDSQPCLHGGTCQDGCG-SYRCTCPQGYTGPN-----CQNLV--HWCDSSPCKNGGKC 1074
Query: 436 PKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGA---CRCN 492
+ + P G+T + CE Q +G+ + C G + G CRC
Sbjct: 1075 WQTHTQYRCECPSGWTGLYCDVPSVSCEVAAQRQGVDVARLCQHGGLCVDAGNTHHCRCQ 1134
Query: 493 EGRVGRHCECSTDEVN----------SEDMDAYCRK---------------ENSSEICSN 527
G G +CE DE + ++ + Y K E S C N
Sbjct: 1135 AGYTGSYCEDLVDECSPSPCQNGATCTDYLGGYSCKCVAGYHGVNCSEEIDECLSHPCQN 1194
Query: 528 NGECV----CGQCVCRKRDNTNEIYSGKFCECDNFNCDR-----SNGLICGGNGVCKCRV 578
G C+ +C C + G CE + +C+ S C NG C +V
Sbjct: 1195 GGTCLDLPNTYKCSCPRGT------QGVHCEINVDDCNPPVDPVSRSPKCFNNGTCVDQV 1248
Query: 579 ----CECNPNYTGSACDCSLD---TSTCEASNGQICNGR---GICECGV------CKCTD 622
C C P + G C+ ++ ++ C+A Q C R CEC C+
Sbjct: 1249 GGYSCTCPPGFVGERCEGDVNECLSNPCDARGTQNCVQRVNDFHCECRAGHTGRRCESVI 1308
Query: 623 PKFQGQTCEMCQTC 636
+G+ C+ TC
Sbjct: 1309 NGCKGKPCKNGGTC 1322
Score = 51.6 bits (122), Expect = 3e-06
Identities = 74/330 (22%), Positives = 118/330 (35%), Gaps = 61/330 (18%)
Query: 395 ISYKSYCKNGVNGTG--ENGRKC--SNISIGDEVQFEISITSNKCPKKDSDSFKIRPLGF 450
++++ C G G EN C +N G ++ + +CP + + +
Sbjct: 239 VTHECACLPGFTGQNCEENIDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQY------C 292
Query: 451 TEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSE 510
TE+V+ EC+ CH +G + C C G G C + D+ S
Sbjct: 293 TEDVD-------ECQLMPNACQNGGTCHNTHGGYNCV---CVNGWTGEDCSENIDDCASA 342
Query: 511 DM--DAYCRKENSSEICSNNGECVCGQC--VCRKRDNTNEIYSGKFCECDNFNCDRSNGL 566
A C +S C EC G+ +C D C + C+ +
Sbjct: 343 ACFHGATCHDRVASFYC----ECPHGRTGLLCHLND-----------ACISNPCNEGSN- 386
Query: 567 ICGGNGVCKCRVCECNPNYTGSAC-----DCSLDTSTCEASNGQICNGRGICECGV---- 617
C N V +C C YTG AC +CSL + CE + G+ N G EC
Sbjct: 387 -CDTNPVNGKAICTCPSGYTGPACSQDVDECSLGANPCEHA-GKCINTLGSFECQCLQGY 444
Query: 618 ----CKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECS----YFN 669
C+ + C+ TCL E +C+ C +G + T EC+ N
Sbjct: 445 TGPRCEIDVNECVSNPCQNDATCLDQIGEF-QCI-CMPGYEGVHCEVNTDECASSPCLHN 502
Query: 670 ITKVESRDKLPQPVQPDPVSHCKEKDVDDC 699
++ ++ H + DVD+C
Sbjct: 503 GRCLDKINEFQCECPTGFTGHLCQYDVDEC 532
Score = 42.7 bits (99), Expect = 0.001
Identities = 58/229 (25%), Positives = 74/229 (32%), Gaps = 55/229 (24%)
Query: 464 CECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCE-----CSTDEVNSEDMDAYCRK 518
C E KC NGT AC C VG C+ ST N+ R+
Sbjct: 24 CSQPGETCLNGGKCEAANGT---EACVCGGAFVGPRCQDPNPCLSTPCKNAGTCHVVDRR 80
Query: 519 ENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRV 578
+ CS C G +SG C N +N C G C
Sbjct: 81 GVADYACS----CALG-------------FSGPLCLTPLDNACLTNP--CRNGGTCDLLT 121
Query: 579 -----CECNPNYTGSACDCSLDTSTCEASNGQIC---NGRGICECGVCKCTDPKFQGQTC 630
C C P ++G +C + ++ +NG C IC C P F G TC
Sbjct: 122 LTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFEASYICHC------PPSFHGPTC 175
Query: 631 EM----CQTCLGVCAE----HKE-----CVQCRAFNKGEKKDTCTQECS 666
C G+C H E CV CRA + G + CS
Sbjct: 176 RQDVNECGQKPGLCRHGGTCHNEVGSYRCV-CRATHTGPNCERPYVPCS 223
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 71.6 bits (174), Expect = 3e-12
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 47/219 (21%)
Query: 475 PKCHEGNGTFECGACRCNEGRVGRHCECSTDEV-------NSEDMDAYC------RKENS 521
P GNG + G C+C G G C+ ++ + +D C + E+
Sbjct: 608 PVLCSGNGQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYKGEHC 667
Query: 522 SEI------CSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNG--V 573
E+ CS++G CV G+C+C + + G CE C C G+G +
Sbjct: 668 EEVDCLDPTCSSHGVCVNGECLC------SPGWGGLNCELARVQCPDQ----CSGHGTYL 717
Query: 574 CKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMC 633
+C C+PN+ G DCS++ + + C G+C G C+C + + G C+
Sbjct: 718 PDTGLCSCDPNWMGP--DCSVEVCSVD------CGTHGVCIGGACRC-EEGWTGAACDQ- 767
Query: 634 QTCLGVCAEHKEC----VQCRAFNKGE--KKDTCTQECS 666
+ C C EH C +CR GE D C C+
Sbjct: 768 RVCHPRCIEHGTCKDGKCECREGWNGEHCTIDGCPDLCN 806
Score = 66.2 bits (160), Expect = 1e-10
Identities = 56/183 (30%), Positives = 73/183 (39%), Gaps = 48/183 (26%)
Query: 469 EGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNN 528
+ + + P+ GNG G C C G +G A C K +CS N
Sbjct: 571 DSVQDCPRNCHGNGECVSGVCHCFPGFLG----------------ADCAKAACPVLCSGN 614
Query: 529 GECVCGQCVCRKRDNTNEIYSG-KFCECD---NFNCDRSNGLICGGNGVCKCRVCECNPN 584
G+ G C C YSG K ECD N D S CGG+G C C C+
Sbjct: 615 GQYSKGTCQC---------YSGWKGAECDVPMNQCIDPS----CGGHGSCIDGNCVCSAG 661
Query: 585 YTGSAC---DCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQT-CLGVC 640
Y G C DC LD + C+ G+C G C C+ P + G CE+ + C C
Sbjct: 662 YKGEHCEEVDC-LDPT---------CSSHGVCVNGECLCS-PGWGGLNCELARVQCPDQC 710
Query: 641 AEH 643
+ H
Sbjct: 711 SGH 713
Score = 60.1 bits (144), Expect = 8e-09
Identities = 53/201 (26%), Positives = 76/201 (37%), Gaps = 61/201 (30%)
Query: 475 PKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCG 534
P C G+G+ G C C+ G G HCE EV+ D CS++G CV G
Sbjct: 643 PSCG-GHGSCIDGNCVCSAGYKGEHCE----EVDCLD-----------PTCSSHGVCVNG 686
Query: 535 QCVCRKRDNTNEIYSGKFCECDNFNC-DRSNG---------------------------- 565
+C+C + G CE C D+ +G
Sbjct: 687 ECLCSPG------WGGLNCELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEVCS 740
Query: 566 LICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKF 625
+ CG +GVC C C +TG+AC D C C G C+ G C+C + +
Sbjct: 741 VDCGTHGVCIGGACRCEEGWTGAAC----DQRVCHPR----CIEHGTCKDGKCECRE-GW 791
Query: 626 QGQTCEMCQTCLGVCAEHKEC 646
G+ C + C +C + C
Sbjct: 792 NGEHCTI-DGCPDLCNGNGRC 811
Score = 55.8 bits (133), Expect = 2e-07
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 20/124 (16%)
Query: 525 CSNNGECVCGQCVCRKRDNTNEIYSGKF-CECDNFNCDRSNGLICGGNGVCKCRVCECNP 583
C NGECV G C C + G +C C ++C GNG C+C
Sbjct: 580 CHGNGECVSGVCHC---------FPGFLGADCAKAACP----VLCSGNGQYSKGTCQCYS 626
Query: 584 NYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEH 643
+ G+ CD ++ + C G G C G C C+ ++G+ CE C+ H
Sbjct: 627 GWKGAECDVPMNQCIDPS-----CGGHGSCIDGNCVCS-AGYKGEHCEEVDCLDPTCSSH 680
Query: 644 KECV 647
CV
Sbjct: 681 GVCV 684
Score = 51.2 bits (121), Expect = 4e-06
Identities = 39/159 (24%), Positives = 60/159 (37%), Gaps = 47/159 (29%)
Query: 461 ICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKEN 520
+C +C + G+ GACRC EG G C+ C
Sbjct: 738 VCSVDCGTHGVCIG------------GACRCEEGWTGAACD-----------QRVCHPR- 773
Query: 521 SSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRV-- 578
C +G C G+C CR E ++G+ C D C +C GNG C
Sbjct: 774 ----CIEHGTCKDGKCECR------EGWNGEHCTIDG--CPD----LCNGNGRCTLGQNS 817
Query: 579 --CECNPNYTGSACDCSLDTSTCEASNGQICNGRGICEC 615
C C + G C+ +++TS + + + G G+ +C
Sbjct: 818 WQCVCQTGWRGPGCNVAMETSCADNKDNE---GDGLVDC 853
Score = 46.2 bits (108), Expect = 1e-04
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 568 CGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQG 627
C GNG C VC C P + G+ C +A+ +C+G G G C+C ++G
Sbjct: 580 CHGNGECVSGVCHCFPGFLGADC--------AKAACPVLCSGNGQYSKGTCQCYS-GWKG 630
Query: 628 QTCE--MCQTCLGVCAEHKECVQ----CRAFNKGE 656
C+ M Q C H C+ C A KGE
Sbjct: 631 AECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYKGE 665
>gi|153946395 tenascin C precursor [Homo sapiens]
Length = 2201
Score = 69.3 bits (168), Expect = 1e-11
Identities = 69/242 (28%), Positives = 88/242 (36%), Gaps = 62/242 (25%)
Query: 462 CECECQSEGIPESPKC--HEGNGTFECGACRC-----NEGR-VGRHCECSTDEVNSEDMD 513
C C ++G E +C EG +C RC N GR V CEC ++
Sbjct: 346 CPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRCECDDGFTGAD--- 402
Query: 514 AYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFC---ECDN------------- 557
C + CS +G CV GQCVC +E Y+G+ C C N
Sbjct: 403 --CGELKCPNGCSGHGRCVNGQCVC------DEGYTGEDCSQLRCPNDCHSRGRCVEGKC 454
Query: 558 --------FNC-DRSNGLICGGNGVCKCRVCECNPNYTGSAC---DCSLDTSTCEASNGQ 605
++C D S C +G C +C C+ YTG C C D
Sbjct: 455 VCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRD---------- 504
Query: 606 ICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECV--QCRAFNKGEKKDTCTQ 663
C+ RG+C G C C D F G C +C C CV QC KD Q
Sbjct: 505 -CSNRGLCVDGQCVCED-GFTGPDCAEL-SCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQ 561
Query: 664 EC 665
C
Sbjct: 562 RC 563
Score = 68.2 bits (165), Expect = 3e-11
Identities = 61/214 (28%), Positives = 82/214 (38%), Gaps = 36/214 (16%)
Query: 459 QYICECECQSEGIPESPKC--HEGNGTFECGACRC-----NEGR-VGRHCECSTDEVNSE 510
Q C +C S G KC +G ++C C GR V C C D E
Sbjct: 436 QLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCD-DGYTGE 494
Query: 511 DMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGG 570
D CR CSN G CV GQCVC + ++G +C +C C G
Sbjct: 495 D----CRDRQCPRDCSNRGLCVDGQCVC------EDGFTGP--DCAELSCPND----CHG 538
Query: 571 NGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTC 630
G C C C+ + G C C + C+G+G C G C C + F G C
Sbjct: 539 QGRCVNGQCVCHEGFMGKDC----KEQRCPSD----CHGQGRCVDGQCICHE-GFTGLDC 589
Query: 631 EMCQTCLGVCAEHKECVQCRAF-NKGEKKDTCTQ 663
+C C +CV R N+G + C++
Sbjct: 590 GQ-HSCPSDCNNLGQCVSGRCICNEGYSGEDCSE 622
Score = 62.8 bits (151), Expect = 1e-09
Identities = 66/240 (27%), Positives = 86/240 (35%), Gaps = 50/240 (20%)
Query: 461 ICECECQSEG--IPESPKCHEGNGTFECGACRC-----NEGR-VGRHCECSTDEVNSEDM 512
+C C + G + C EG +C C + GR + C C + ED
Sbjct: 283 LCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCE-EGFTGED- 340
Query: 513 DAYCRKENSSEICSNNGECVCGQCVC----------RKR-----DNTNEIYSGKFCECDN 557
C K C G C GQCVC KR N G+ CECD+
Sbjct: 341 ---CGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGR-CECDD 396
Query: 558 FNCDRSNGLI-----CGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGI 612
G + C G+G C C C+ YTG C S N C+ RG
Sbjct: 397 GFTGADCGELKCPNGCSGHGRCVNGQCVCDEGYTGEDC------SQLRCPND--CHSRGR 448
Query: 613 CECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQ----CRAFNKGE--KKDTCTQECS 666
C G C C + F+G C +C C +H CV C GE + C ++CS
Sbjct: 449 CVEGKCVC-EQGFKGYDCS-DMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCS 506
Score = 60.1 bits (144), Expect = 8e-09
Identities = 60/220 (27%), Positives = 81/220 (36%), Gaps = 50/220 (22%)
Query: 465 ECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEI 524
+C E P C E +GT G C C++G G C K
Sbjct: 246 DCSREICPVP--CSEEHGTCVDGLCVCHDGFAGDDCN----------------KPLCLNN 287
Query: 525 CSNNGECVCGQCVCRK---RDNTNEIYSGKFC----ECDNFNCDRSNGL----------- 566
C N G CV +CVC + ++ +E+ C C N C G
Sbjct: 288 CYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTGEDCGKPTCP 347
Query: 567 -ICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKF 625
C G C+ C C+ + G DCS C A C+ RG C G C+C D F
Sbjct: 348 HACHTQGRCEEGQCVCDEGFAG--VDCS--EKRCPAD----CHNRGRCVDGRCEC-DDGF 398
Query: 626 QGQTCEMCQTCLGVCAEHKECV--QCRAFNKGEKKDTCTQ 663
G C + C C+ H CV QC ++G + C+Q
Sbjct: 399 TGADCGELK-CPNGCSGHGRCVNGQC-VCDEGYTGEDCSQ 436
Score = 56.6 bits (135), Expect = 9e-08
Identities = 63/231 (27%), Positives = 80/231 (34%), Gaps = 55/231 (23%)
Query: 464 CECQSEGIPESPKCHEGNGTFEC--------GACRCNEGRVGRHCE---CSTDEVNSED- 511
C C E + P C E C G C C++G G C C +D N +
Sbjct: 172 CGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSD-CNDQGK 230
Query: 512 --------MDAYCRKENSSEIC-----SNNGECVCGQCV---------CRKRDNTNEIYS 549
+ Y + S EIC +G CV G CV C K N Y+
Sbjct: 231 CVNGVCICFEGYAGADCSREICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYN 290
Query: 550 GKFC---EC---DNFNCDRSNGLICGGN----GVCKCRVCECNPNYTGSACDCSLDTSTC 599
C EC + F + + LIC + G C C C +TG C TC
Sbjct: 291 RGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTGEDC----GKPTC 346
Query: 600 EASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCR 650
C+ +G CE G C C D F G C + C C CV R
Sbjct: 347 P----HACHTQGRCEEGQCVC-DEGFAGVDCSE-KRCPADCHNRGRCVDGR 391
Score = 53.5 bits (127), Expect = 7e-07
Identities = 48/180 (26%), Positives = 63/180 (35%), Gaps = 48/180 (26%)
Query: 475 PKCHEGNGTFE---CGACRCNEGRVGRHC---ECSTDEVNSEDMDAYCRKENSSEICSNN 528
P C G G F CG C C G G +C EC + C
Sbjct: 159 PFC-SGRGNFSTEGCG-CVCEPGWKGPNCSEPECPGN-------------------CHLR 197
Query: 529 GECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGS 588
G C+ GQC+C ++ ++G+ +C C C G C VC C Y G+
Sbjct: 198 GRCIDGQCIC------DDGFTGE--DCSQLACPSD----CNDQGKCVNGVCICFEGYAGA 245
Query: 589 ACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQ 648
C + C + G C G+C C D F G C CL C CV+
Sbjct: 246 DCSREICPVPCSEEH-------GTCVDGLCVCHD-GFAGDDCNK-PLCLNNCYNRGRCVE 296
>gi|62988324 tenascin N [Homo sapiens]
Length = 1299
Score = 69.3 bits (168), Expect = 1e-11
Identities = 54/190 (28%), Positives = 79/190 (41%), Gaps = 39/190 (20%)
Query: 452 EEVEVILQYICECECQSEGIPESPKCHEGNGTF--ECGACRCNEGRVGRHCECSTDEVNS 509
EE V ++ C + +G+ + + G+GTF E +C C EGR G CE
Sbjct: 116 EEEMVEMKEQCSAQRCCQGVTDLSRHCSGHGTFSLETCSCHCEEGREGPACE-------- 167
Query: 510 EDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICG 569
+ CS +G CV G+C+C +E Y G +C C + C
Sbjct: 168 --------RLACPGACSGHGRCVDGRCLC------HEPYVG--ADCGYPACPEN----CS 207
Query: 570 GNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQT 629
G+G C VC+C+ ++ DCS C C+G G C+ G C C + F G
Sbjct: 208 GHGECVRGVCQCHEDFMSE--DCS--EKRCPGD----CSGHGFCDTGECYC-EEGFTGLD 258
Query: 630 CEMCQTCLGV 639
C T G+
Sbjct: 259 CAQVVTPQGL 268
>gi|24041035 notch 2 preproprotein [Homo sapiens]
Length = 2471
Score = 67.8 bits (164), Expect = 4e-11
Identities = 88/322 (27%), Positives = 125/322 (38%), Gaps = 75/322 (23%)
Query: 376 NSLSSEVILENGKLSEGVTISYKSYCKNGVNGTG--ENGRKCSNISIGDEVQFEISITSN 433
N SE G S+ V SY C+ G +G N +C+ S + I S
Sbjct: 951 NECLSEPCKNGGTCSDYVN-SYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSF 1009
Query: 434 KCPKKDSDSFKIRPLGFTEEVEVILQYICECE---CQSEGIPESPKCHEGNGTFECGACR 490
C + P+GFT L I EC C +EG C +G GT+ C
Sbjct: 1010 SC---------LCPVGFTGSF--CLHEINECSSHPCLNEGT-----CVDGLGTYRCS--- 1050
Query: 491 CNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVC----GQCVCRKRDNTNE 546
C G G++C+ + C S C N G CV QC+C
Sbjct: 1051 CPLGYTGKNCQTLVN---------LC----SRSPCKNKGTCVQKKAESQCLCPSG----- 1092
Query: 547 IYSGKFCECDNFNCD----RSNGLI---CGGNGVC----KCRVCECNPNYTGSACDCSLD 595
++G +C+ N +CD R L+ C +GVC C+C YTGS C+ LD
Sbjct: 1093 -WAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLD 1151
Query: 596 -TSTCEASNGQICN---GRGICEC-----GV-CKCTDPKFQGQTCEMCQTCLGVCAEHKE 645
++ +G C+ G CEC GV C+ + Q Q C+ TC+ + H +
Sbjct: 1152 ECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDL-VNHFK 1210
Query: 646 CVQCRAFNKG----EKKDTCTQ 663
C C +G E D C +
Sbjct: 1211 C-SCPPGTRGLLCEENIDDCAR 1231
Score = 60.8 bits (146), Expect = 5e-09
Identities = 80/315 (25%), Positives = 124/315 (39%), Gaps = 77/315 (24%)
Query: 398 KSYCKNGVNGT-------GENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRPL-- 448
K+ C+NG GT G+ +C++ G++ Q+ TS+ C F RP
Sbjct: 70 KNRCQNG--GTCVAQAMLGKATCRCASGFTGEDCQYS---TSHPC-------FVSRPCLN 117
Query: 449 GFTEEVEVILQYICEC-------ECQSEGIPESPKCHEGNGTFECG---ACRCNEGRVGR 498
G T + Y C C ECQ S C G+ +C+C G G+
Sbjct: 118 GGTCHMLSRDTYECTCQVGFTGKECQWTDACLSHPCANGSTCTTVANQFSCKCLTGFTGQ 177
Query: 499 HCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNF 558
CE +VN D+ +C+ + + +C C Q ++G++C+
Sbjct: 178 KCET---DVNECDIPGHCQHGGTCLNLPGSYQCQCPQG-----------FTGQYCDSLYV 223
Query: 559 NCDRSNGLICGGNGVCKCR-----VCECNPNYTGSACDCSLDTSTCEASNGQICNGRGIC 613
C S C G C+ C C P + GS C+ ++D + N + NG G+C
Sbjct: 224 PCAPSP---CVNGGTCRQTGDFTFECNCLPGFEGSTCERNID----DCPNHRCQNG-GVC 275
Query: 614 ECGV----CKCTDPKFQGQTC-EMCQTCL---------GVCAEHKECVQCRAFNKGEKKD 659
GV C+C P++ GQ C E CL G CA C N G D
Sbjct: 276 VDGVNTYNCRC-PPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVN-GWSGD 333
Query: 660 TCTQ---ECSYFNIT 671
C++ +C++ + T
Sbjct: 334 DCSENIDDCAFASCT 348
Score = 50.1 bits (118), Expect = 8e-06
Identities = 69/281 (24%), Positives = 89/281 (31%), Gaps = 58/281 (20%)
Query: 410 ENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICEC----- 464
+NG C N+ G + C + L + I Y C C
Sbjct: 767 QNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYT 826
Query: 465 --ECQSEGIPESPK-------CHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDM--D 513
CQ+ P SP C E + FE C C G G+ C DE S+
Sbjct: 827 GKNCQTVLAPCSPNPCENAAVCKE-SPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNH 885
Query: 514 AYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGV 573
C S +C EC G +SG CE D +C + C G
Sbjct: 886 GLCHNTQGSYMC----ECPPG-------------FSGMDCEEDIDDCLANP---CQNGGS 925
Query: 574 CKCRV----CECNPNYTGSACDCSLDTSTCE-ASNGQICNGRGICECGVCKCTDPKFQGQ 628
C V C C P +TG C ++ E NG C+ CKC F G
Sbjct: 926 CMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCS--DYVNSYTCKC-QAGFDGV 982
Query: 629 TCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFN 669
CE EC + FN G TC + F+
Sbjct: 983 HCE---------NNINECTESSCFNGG----TCVDGINSFS 1010
Score = 47.8 bits (112), Expect = 4e-05
Identities = 61/246 (24%), Positives = 80/246 (32%), Gaps = 101/246 (41%)
Query: 465 ECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEI 524
EC S+ C + G F C C G G HCE +E S
Sbjct: 459 ECHSDPCQNDATCLDKIGGF---TCLCMPGFKGVHCELEINECQSNP------------- 502
Query: 525 CSNNGECVCG----QCVCRKRDNTNEIYSGKFCECDNFNC------------DRSNGLIC 568
C NNG+CV QC+C ++G C+ D +C D NG C
Sbjct: 503 CVNNGQCVDKVNRFQCLCPPG------FTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYEC 556
Query: 569 ----GGNGVC----------------KCR------VCECNPNYTGSACDCSLD---TSTC 599
G GV +C+ C CNP Y G+ C +D +S C
Sbjct: 557 QCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPC 616
Query: 600 -------EASNGQICNGR----------------------GICECGV----CKCTDPKFQ 626
+ NG CN + GIC G+ C C+ P F
Sbjct: 617 LNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHGICMDGINRYSCVCS-PGFT 675
Query: 627 GQTCEM 632
GQ C +
Sbjct: 676 GQRCNI 681
Score = 47.4 bits (111), Expect = 5e-05
Identities = 54/209 (25%), Positives = 71/209 (33%), Gaps = 50/209 (23%)
Query: 460 YICECECQSEGIP--------ESPKCHEGN--GTFECGACRCNEGRVGRHCECSTDEVNS 509
Y C+C G+ + CH G + C CN G +G C DE S
Sbjct: 554 YECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYS 613
Query: 510 EDMDAYCRKENSSEICSNNGECVC----GQCVCRKRDNTNEIYSGKFCECDNFNCDRSNG 565
C N+G C+ QC C+ SG CE NF+ SN
Sbjct: 614 SP-------------CLNDGRCIDLVNGYQCNCQPGT------SGVNCEI-NFDDCASNP 653
Query: 566 LICGGNGVCKCRV----CECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGV---- 617
I +G+C + C C+P +TG C+ +D ASN C C GV
Sbjct: 654 CI---HGICMDGINRYSCVCSPGFTGQRCNIDIDEC---ASNP--CRKGATCINGVNGFR 705
Query: 618 CKCTDPKFQGQTCEMCQTCLGVCAEHKEC 646
C C + CL H C
Sbjct: 706 CICPEGPHHPSCYSQVNECLSNPCIHGNC 734
Score = 46.6 bits (109), Expect = 9e-05
Identities = 53/188 (28%), Positives = 65/188 (34%), Gaps = 40/188 (21%)
Query: 474 SPKCHEGN--GTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGEC 531
S C GN G C C+ G VG +CE +E S C N G C
Sbjct: 726 SNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNP-------------CQNGGTC 772
Query: 532 ---VCG-QCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVC----KCRVCECNP 583
V G +C C+K + G C+ N D C G C C C
Sbjct: 773 DNLVNGYRCTCKKG------FKGYNCQ---VNIDECASNPCLNQGTCFDDISGYTCHCVL 823
Query: 584 NYTGSACDCSL---DTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEM-CQTCLG- 638
YTG C L + CE N +C E C C P +QGQ C + C+
Sbjct: 824 PYTGKNCQTVLAPCSPNPCE--NAAVCKESPNFESYTCLCA-PGWQGQRCTIDIDECISK 880
Query: 639 VCAEHKEC 646
C H C
Sbjct: 881 PCMNHGLC 888
Score = 45.1 bits (105), Expect = 3e-04
Identities = 53/207 (25%), Positives = 75/207 (36%), Gaps = 47/207 (22%)
Query: 481 NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVC----GQC 536
NGT G C+C EG +G +C+ C K C N G CV G+
Sbjct: 46 NGT---GYCKCPEGFLGEYCQHRDP----------CEKNR----CQNGGTCVAQAMLGKA 88
Query: 537 VCRKRDNTNEIYSGKFCECDNFN-CDRSNGLICGGNGVCKCR---VCECNPNYTGSACDC 592
CR ++G+ C+ + C S + GG R C C +TG C
Sbjct: 89 TCRCASG----FTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQW 144
Query: 593 SLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEM----------CQ---TCLGV 639
+ + +NG C + CKC F GQ CE CQ TCL +
Sbjct: 145 TDACLSHPCANGSTCT--TVANQFSCKCL-TGFTGQKCETDVNECDIPGHCQHGGTCLNL 201
Query: 640 CAEHKECVQCRAFNKGEKKDTCTQECS 666
++ QC G+ D+ C+
Sbjct: 202 PGSYQ--CQCPQGFTGQYCDSLYVPCA 226
Score = 43.5 bits (101), Expect = 8e-04
Identities = 48/215 (22%), Positives = 65/215 (30%), Gaps = 69/215 (32%)
Query: 464 CECQSEGIPESPKCHEGNGTFEC---GACRCNEGRVGRHCECSTDEVNSEDMDAYCRKEN 520
CE + P C G + +CRC G G CE +E S
Sbjct: 1222 CEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNP--------- 1272
Query: 521 SSEICSNNGECVCGQ------CVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVC 574
CS+ G C Q CVCR ++G+ CE C + + C G C
Sbjct: 1273 ----CSSEGSLDCIQLTNDYLCVCRSA------FTGRHCETFVDVCPQ---MPCLNGGTC 1319
Query: 575 KCR-------VCECNPNYTGSACDCSLDTSTCEASNGQI---------CNGRGICECGV- 617
+C C P ++G+ C S C + C CE G
Sbjct: 1320 AVASNMPDGFICRCPPGFSGARCQSSCGQVKCRKGEQCVHTASGPRCFCPSPRDCESGCA 1379
Query: 618 --------------------CKCTDPKFQGQTCEM 632
C+C P F G CE+
Sbjct: 1380 SSPCQHGGSCHPQRQPPYYSCQCA-PPFSGSRCEL 1413
Score = 42.7 bits (99), Expect = 0.001
Identities = 70/285 (24%), Positives = 96/285 (33%), Gaps = 68/285 (23%)
Query: 466 CQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEV----NSEDMDAYCRKEN- 520
CQ+ G+ C +G T+ C RC G+ C DE N+ C N
Sbjct: 269 CQNGGV-----CVDGVNTYNC---RCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNG 320
Query: 521 ----------SSEICSNN-GECVCGQCV----CRKRDNT-----NEIYSGKFCECDNFNC 560
S + CS N +C C C R + E +G C D+
Sbjct: 321 GYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACI 380
Query: 561 DRS--NGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGIC--ECG 616
G +C N + +C C Y G+ DC+ D C +N C G C G
Sbjct: 381 SNPCHKGALCDTNPLNGQYICTCPQGYKGA--DCTEDVDECAMANSNPCEHAGKCVNTDG 438
Query: 617 VCKCTDPK-FQGQTCEM---------CQ---TCLG-------VCAEHKECVQCRAFNKGE 656
C K + G CEM CQ TCL +C + V C
Sbjct: 439 AFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINEC 498
Query: 657 KKDTCTQ--ECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDC 699
+ + C +C + KV L P PV + D+DDC
Sbjct: 499 QSNPCVNNGQC----VDKVNRFQCLCPPGFTGPVC---QIDIDDC 536
>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
Length = 2725
Score = 67.0 bits (162), Expect = 7e-11
Identities = 58/217 (26%), Positives = 79/217 (36%), Gaps = 53/217 (24%)
Query: 489 CRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIY 548
C N + HC C + + C +++ +C NGE G CVCR +
Sbjct: 536 CNGNGECISGHCHCFPGFLGPD-----CARDSCPVLCGGNGEYEKGHCVCRHG------W 584
Query: 549 SGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSAC---DCSLD---------- 595
G C+ C C G+G C VC C P Y G C DC LD
Sbjct: 585 KGPECDVPEEQCIDPT---CFGHGTCIMGVCICVPGYKGEICEEEDC-LDPMCSNHGICV 640
Query: 596 TSTCEASNG--------------QICNGRG--ICECGVCKCTDPKFQGQTCEMCQTCLGV 639
C S G + C+G G + + GVC C DPK+ G C + C
Sbjct: 641 KGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSC-DPKWTGSDCS-TELCTME 698
Query: 640 CAEHKEC----VQCRAFNKGEKKDTCTQECSYFNITK 672
C H C QC +G TC + + + T+
Sbjct: 699 CGSHGVCSRGICQC---EEGWVGPTCEERSCHSHCTE 732
Score = 63.2 bits (152), Expect = 9e-10
Identities = 52/216 (24%), Positives = 82/216 (37%), Gaps = 58/216 (26%)
Query: 480 GNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAY------------------CRKENS 521
GNG +E G C C G G C+ ++ + C +E+
Sbjct: 569 GNGEYEKGHCVCRHGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDC 628
Query: 522 SE-ICSNNGECVCGQC----------------VCRKRDNTNEIY--SGKFCECDN--FNC 560
+ +CSN+G CV G+C VC+++ + + + C CD
Sbjct: 629 LDPMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGS 688
Query: 561 DRSNGLI---CGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGV 617
D S L CG +GVC +C+C + G C+ E S C G C+ G
Sbjct: 689 DCSTELCTMECGSHGVCSRGICQCEEGWVGPTCE--------ERSCHSHCTEHGQCKDGK 740
Query: 618 CKCTDPKFQGQTCEMC-------QTCLGVCAEHKEC 646
C+C+ P ++G C + C G+C + C
Sbjct: 741 CECS-PGWEGDHCTIAHYLDAVRDGCPGLCFGNGRC 775
Score = 62.8 bits (151), Expect = 1e-09
Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 28/157 (17%)
Query: 519 ENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRV 578
++ S C+ NGEC+ G C C + G C D S ++CGGNG +
Sbjct: 530 DDCSTNCNGNGECISGHCHCFPG------FLGPDCARD------SCPVLCGGNGEYEKGH 577
Query: 579 CECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLG 638
C C + G CD E C G G C GVC C P ++G+ CE + CL
Sbjct: 578 CVCRHGWKGPECDVPE-----EQCIDPTCFGHGTCIMGVCICV-PGYKGEICEE-EDCLD 630
Query: 639 -VCAEHKECVQ----CRAFNKGEKKDT----CTQECS 666
+C+ H CV+ C G +T C ++CS
Sbjct: 631 PMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCS 667
>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
Length = 2731
Score = 67.0 bits (162), Expect = 7e-11
Identities = 58/217 (26%), Positives = 79/217 (36%), Gaps = 53/217 (24%)
Query: 489 CRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIY 548
C N + HC C + + C +++ +C NGE G CVCR +
Sbjct: 535 CNGNGECISGHCHCFPGFLGPD-----CARDSCPVLCGGNGEYEKGHCVCRHG------W 583
Query: 549 SGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSAC---DCSLD---------- 595
G C+ C C G+G C VC C P Y G C DC LD
Sbjct: 584 KGPECDVPEEQCIDPT---CFGHGTCIMGVCICVPGYKGEICEEEDC-LDPMCSNHGICV 639
Query: 596 TSTCEASNG--------------QICNGRG--ICECGVCKCTDPKFQGQTCEMCQTCLGV 639
C S G + C+G G + + GVC C DPK+ G C + C
Sbjct: 640 KGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSC-DPKWTGSDCS-TELCTME 697
Query: 640 CAEHKEC----VQCRAFNKGEKKDTCTQECSYFNITK 672
C H C QC +G TC + + + T+
Sbjct: 698 CGSHGVCSRGICQC---EEGWVGPTCEERSCHSHCTE 731
Score = 63.2 bits (152), Expect = 9e-10
Identities = 52/216 (24%), Positives = 82/216 (37%), Gaps = 58/216 (26%)
Query: 480 GNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAY------------------CRKENS 521
GNG +E G C C G G C+ ++ + C +E+
Sbjct: 568 GNGEYEKGHCVCRHGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDC 627
Query: 522 SE-ICSNNGECVCGQC----------------VCRKRDNTNEIY--SGKFCECDN--FNC 560
+ +CSN+G CV G+C VC+++ + + + C CD
Sbjct: 628 LDPMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGS 687
Query: 561 DRSNGLI---CGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGV 617
D S L CG +GVC +C+C + G C+ E S C G C+ G
Sbjct: 688 DCSTELCTMECGSHGVCSRGICQCEEGWVGPTCE--------ERSCHSHCTEHGQCKDGK 739
Query: 618 CKCTDPKFQGQTCEMC-------QTCLGVCAEHKEC 646
C+C+ P ++G C + C G+C + C
Sbjct: 740 CECS-PGWEGDHCTIAHYLDAVRDGCPGLCFGNGRC 774
Score = 62.8 bits (151), Expect = 1e-09
Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 28/157 (17%)
Query: 519 ENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRV 578
++ S C+ NGEC+ G C C + G C D S ++CGGNG +
Sbjct: 529 DDCSTNCNGNGECISGHCHCFPG------FLGPDCARD------SCPVLCGGNGEYEKGH 576
Query: 579 CECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLG 638
C C + G CD E C G G C GVC C P ++G+ CE + CL
Sbjct: 577 CVCRHGWKGPECDVPE-----EQCIDPTCFGHGTCIMGVCICV-PGYKGEICEE-EDCLD 629
Query: 639 -VCAEHKECVQ----CRAFNKGEKKDT----CTQECS 666
+C+ H CV+ C G +T C ++CS
Sbjct: 630 PMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCS 666
>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
Length = 2732
Score = 67.0 bits (162), Expect = 7e-11
Identities = 58/217 (26%), Positives = 79/217 (36%), Gaps = 53/217 (24%)
Query: 489 CRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIY 548
C N + HC C + + C +++ +C NGE G CVCR +
Sbjct: 536 CNGNGECISGHCHCFPGFLGPD-----CARDSCPVLCGGNGEYEKGHCVCRHG------W 584
Query: 549 SGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSAC---DCSLD---------- 595
G C+ C C G+G C VC C P Y G C DC LD
Sbjct: 585 KGPECDVPEEQCIDPT---CFGHGTCIMGVCICVPGYKGEICEEEDC-LDPMCSNHGICV 640
Query: 596 TSTCEASNG--------------QICNGRG--ICECGVCKCTDPKFQGQTCEMCQTCLGV 639
C S G + C+G G + + GVC C DPK+ G C + C
Sbjct: 641 KGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSC-DPKWTGSDCS-TELCTME 698
Query: 640 CAEHKEC----VQCRAFNKGEKKDTCTQECSYFNITK 672
C H C QC +G TC + + + T+
Sbjct: 699 CGSHGVCSRGICQC---EEGWVGPTCEERSCHSHCTE 732
Score = 63.2 bits (152), Expect = 9e-10
Identities = 52/216 (24%), Positives = 82/216 (37%), Gaps = 58/216 (26%)
Query: 480 GNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAY------------------CRKENS 521
GNG +E G C C G G C+ ++ + C +E+
Sbjct: 569 GNGEYEKGHCVCRHGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDC 628
Query: 522 SE-ICSNNGECVCGQC----------------VCRKRDNTNEIY--SGKFCECDN--FNC 560
+ +CSN+G CV G+C VC+++ + + + C CD
Sbjct: 629 LDPMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGS 688
Query: 561 DRSNGLI---CGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGV 617
D S L CG +GVC +C+C + G C+ E S C G C+ G
Sbjct: 689 DCSTELCTMECGSHGVCSRGICQCEEGWVGPTCE--------ERSCHSHCTEHGQCKDGK 740
Query: 618 CKCTDPKFQGQTCEMC-------QTCLGVCAEHKEC 646
C+C+ P ++G C + C G+C + C
Sbjct: 741 CECS-PGWEGDHCTIAHYLDAVRDGCPGLCFGNGRC 775
Score = 62.8 bits (151), Expect = 1e-09
Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 28/157 (17%)
Query: 519 ENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRV 578
++ S C+ NGEC+ G C C + G C D S ++CGGNG +
Sbjct: 530 DDCSTNCNGNGECISGHCHCFPG------FLGPDCARD------SCPVLCGGNGEYEKGH 577
Query: 579 CECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLG 638
C C + G CD E C G G C GVC C P ++G+ CE + CL
Sbjct: 578 CVCRHGWKGPECDVPE-----EQCIDPTCFGHGTCIMGVCICV-PGYKGEICEE-EDCLD 630
Query: 639 -VCAEHKECVQ----CRAFNKGEKKDT----CTQECS 666
+C+ H CV+ C G +T C ++CS
Sbjct: 631 PMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCS 667
>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
Length = 3075
Score = 60.1 bits (144), Expect = 8e-09
Identities = 59/226 (26%), Positives = 82/226 (36%), Gaps = 47/226 (20%)
Query: 464 CECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSS- 522
CEC +G S CH E G C C G+ C+ D CR N S
Sbjct: 902 CECHVKG-SHSAVCH-----LETGLCDCKPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSV 955
Query: 523 -----EICSNNGECVCGQCVCRKRDN--TNEIYSGKFCECDNFNCDRSNGLICGGNGVCK 575
+ C++ G+C C V KR + + Y+ + C +C + G C
Sbjct: 956 AGSVSDGCTDEGQCHCVPGVAGKRCDRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECV 1015
Query: 576 C-------RVCECNPNYTG-------SACDCSLDTST---CEASNGQICNGRGICECGVC 618
C + EC + G AC+CSL ST C+ G C
Sbjct: 1016 CPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGH------------C 1063
Query: 619 KCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQE 664
+C KF G+ C+ C LG + +CV C +G D C E
Sbjct: 1064 QCKS-KFGGRACDQCS--LGY-RDFPDCVPCDCDLRGTSGDACNLE 1105
Score = 40.0 bits (92), Expect = 0.009
Identities = 38/145 (26%), Positives = 53/145 (36%), Gaps = 27/145 (18%)
Query: 485 ECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGEC--VCGQCVCRKRD 542
E G C C G CE D D + C+ N S + S + C V G C C+ +
Sbjct: 1010 ETGECVCPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSK- 1068
Query: 543 NTNEIYSGKFC-----------ECDNFNCD--RSNGLICG-GNGVCKC----RVCECNPN 584
+ G+ C +C +CD ++G C G+C C C C N
Sbjct: 1069 -----FGGRACDQCSLGYRDFPDCVPCDCDLRGTSGDACNLEQGLCGCVEETGACPCKEN 1123
Query: 585 YTGSAC-DCSLDTSTCEASNGQICN 608
G C +C T A N C+
Sbjct: 1124 VFGPQCNECREGTFALRADNPLGCS 1148
Score = 39.7 bits (91), Expect = 0.011
Identities = 52/233 (22%), Positives = 74/233 (31%), Gaps = 38/233 (16%)
Query: 462 CECECQSEGIPESPKCHEGNGT-FECGAC----------RCNEGRVGRH---------CE 501
C C SP CH +G C C RC +G G C+
Sbjct: 791 CACPLTIASNNFSPTCHLNDGDEVVCDWCAPGYSGAWCERCADGYYGNPTVPGESCVPCD 850
Query: 502 CSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCD 561
CS + SE + N C +C + + + CEC +
Sbjct: 851 CSGNVDPSEAGHCDSVTGECLKCLGNTDGAHCERCADGFYGDAVTAKNCRACEC---HVK 907
Query: 562 RSNGLICGGNGVCKCRVCECNPNYTGSACD------CSLDTS-TCEASNGQICN--GRGI 612
S+ +C + +C+C PN TG CD LD+ C N + G
Sbjct: 908 GSHSAVCH----LETGLCDCKPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSDGC 963
Query: 613 CECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQEC 665
+ G C C P G+ C+ C + C C + D T EC
Sbjct: 964 TDEGQCHCV-PGVAGKRCDRCAHGF-YAYQDGSCTPCDCPHTQNTCDPETGEC 1014
Score = 37.0 bits (84), Expect = 0.072
Identities = 54/231 (23%), Positives = 75/231 (32%), Gaps = 62/231 (26%)
Query: 462 CE-CECQS--------EGIPESPKCHEGNGTFECGAC--RCNEGRVGRHCECSTDEVNSE 510
CE C C + E + + K G F G C + +G +CE
Sbjct: 324 CEACNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETC------- 376
Query: 511 DMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGG 570
+D Y R S C C C + + + C D+ + D NG G
Sbjct: 377 -IDGYYRPHKVSPYEDEP----CRPCNCDPVGSLSSV-----CIKDDLHSDLHNGKQPGQ 426
Query: 571 NGVCKCRVCECNPNYTGSACD-CSL---DTSTCEASNGQICNGRGICE----CGVCKCTD 622
C C YTG CD C L D TC + CN G G C C +
Sbjct: 427 --------CPCKEGYTGEKCDRCQLGYKDYPTCVSCG---CNPVGSASDEPCTGPCVCKE 475
Query: 623 PKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKV 673
+G+ C+ C+ +N EK EC F ++ V
Sbjct: 476 -NVEGKACDRCKPGF--------------YNLKEKNPRGCSECFCFGVSDV 511
Score = 30.4 bits (67), Expect = 6.8
Identities = 47/187 (25%), Positives = 65/187 (34%), Gaps = 42/187 (22%)
Query: 471 IPESPKCHEGNGTFECGAC-RCNEGRVGRHCECSTD----EVNSEDMD-AYCRKENS--- 521
+P S H G C C + G HC+ T +V D A C +S
Sbjct: 1401 VPCSCNNHSDTCDPNTGKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPA 1460
Query: 522 --SEICSNNGE--CVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRS---NGLICGGNGVC 574
S C G+ C C+ Y GK CE C S N GG+
Sbjct: 1461 SFSPTCVLEGDHDFRCDACLLG--------YEGKHCE----RCSSSYYGNPQTPGGS--- 1505
Query: 575 KCRVCECNPNYTGSACDCSLDTSTCEASNGQ-ICN-GRGICECGVCKCTDPKFQGQTCEM 632
C+ C+CNP+ GS C+ ++GQ +C G C C+ +
Sbjct: 1506 -CQKCDCNPH--GSV------HGDCDRTSGQCVCRLGASGLRCDECEPRHILMETDCVSC 1556
Query: 633 CQTCLGV 639
C+GV
Sbjct: 1557 DDECVGV 1563
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,869,868
Number of Sequences: 37866
Number of extensions: 1763494
Number of successful extensions: 7395
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 251
Number of HSP's that attempted gapping in prelim test: 5237
Number of HSP's gapped (non-prelim): 1213
length of query: 798
length of database: 18,247,518
effective HSP length: 110
effective length of query: 688
effective length of database: 14,082,258
effective search space: 9688593504
effective search space used: 9688593504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.