BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] (1113 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 2246 0.0 gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 2246 0.0 gi|55741709 RNA binding motif protein 25 [Homo sapiens] 96 2e-19 gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 93 2e-18 gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 90 1e-17 gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 86 1e-16 gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 81 5e-15 gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 79 2e-14 gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 79 2e-14 gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 77 7e-14 gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 77 7e-14 gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens] 77 9e-14 gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens] 77 9e-14 gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 77 1e-13 gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 74 6e-13 gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens] 74 6e-13 gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 73 2e-12 gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 72 3e-12 gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 72 4e-12 gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 72 4e-12 gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 72 4e-12 gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 71 5e-12 gi|125988409 RED protein [Homo sapiens] 71 7e-12 gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 70 1e-11 gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 70 1e-11 gi|34878777 ring finger protein 20 [Homo sapiens] 70 1e-11 gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 70 1e-11 gi|14670268 RD RNA-binding protein [Homo sapiens] 69 2e-11 gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 68 4e-11 gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 68 6e-11 >gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] Length = 1113 Score = 2246 bits (5821), Expect = 0.0 Identities = 1113/1113 (100%), Positives = 1113/1113 (100%) Query: 1 MGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQ 60 MGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQ Sbjct: 1 MGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQ 60 Query: 61 EKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRP 120 EKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRP Sbjct: 61 EKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRP 120 Query: 121 YHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIP 180 YHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIP Sbjct: 121 YHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIP 180 Query: 181 TPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERE 240 TPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERE Sbjct: 181 TPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERE 240 Query: 241 REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLAAKAL 300 REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLAAKAL Sbjct: 241 REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLAAKAL 300 Query: 301 EPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHT 360 EPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHT Sbjct: 301 EPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHT 360 Query: 361 VPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLE 420 VPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLE Sbjct: 361 VPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLE 420 Query: 421 QHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTAL 480 QHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTAL Sbjct: 421 QHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTAL 480 Query: 481 WNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPA 540 WNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPA Sbjct: 481 WNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPA 540 Query: 541 PLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSG 600 PLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSG Sbjct: 541 PLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSG 600 Query: 601 PLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYD 660 PLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYD Sbjct: 601 PLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYD 660 Query: 661 ESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE 720 ESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE Sbjct: 661 ESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE 720 Query: 721 RSPSPPTIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKE 780 RSPSPPTIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKE Sbjct: 721 RSPSPPTIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKE 780 Query: 781 RLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP 840 RLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP Sbjct: 781 RLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP 840 Query: 841 KAAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPL 900 KAAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPL Sbjct: 841 KAAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPL 900 Query: 901 SHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYN 960 SHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYN Sbjct: 901 SHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYN 960 Query: 961 IPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQ 1020 IPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQ Sbjct: 961 IPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQ 1020 Query: 1021 GIEAVFEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVS 1080 GIEAVFEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVS Sbjct: 1021 GIEAVFEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVS 1080 Query: 1081 ERERLQAELDHLRKCLALPAMHWPRGYLKGYPR 1113 ERERLQAELDHLRKCLALPAMHWPRGYLKGYPR Sbjct: 1081 ERERLQAELDHLRKCLALPAMHWPRGYLKGYPR 1113 >gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] Length = 1217 Score = 2246 bits (5821), Expect = 0.0 Identities = 1113/1113 (100%), Positives = 1113/1113 (100%) Query: 1 MGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQ 60 MGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQ Sbjct: 105 MGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQ 164 Query: 61 EKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRP 120 EKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRP Sbjct: 165 EKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRP 224 Query: 121 YHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIP 180 YHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIP Sbjct: 225 YHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIP 284 Query: 181 TPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERE 240 TPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERE Sbjct: 285 TPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERE 344 Query: 241 REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLAAKAL 300 REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLAAKAL Sbjct: 345 REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLAAKAL 404 Query: 301 EPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHT 360 EPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHT Sbjct: 405 EPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHT 464 Query: 361 VPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLE 420 VPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLE Sbjct: 465 VPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLE 524 Query: 421 QHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTAL 480 QHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTAL Sbjct: 525 QHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTAL 584 Query: 481 WNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPA 540 WNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPA Sbjct: 585 WNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPA 644 Query: 541 PLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSG 600 PLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSG Sbjct: 645 PLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSG 704 Query: 601 PLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYD 660 PLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYD Sbjct: 705 PLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYD 764 Query: 661 ESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE 720 ESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE Sbjct: 765 ESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE 824 Query: 721 RSPSPPTIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKE 780 RSPSPPTIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKE Sbjct: 825 RSPSPPTIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKE 884 Query: 781 RLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP 840 RLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP Sbjct: 885 RLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP 944 Query: 841 KAAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPL 900 KAAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPL Sbjct: 945 KAAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPL 1004 Query: 901 SHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYN 960 SHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYN Sbjct: 1005 SHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYN 1064 Query: 961 IPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQ 1020 IPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQ Sbjct: 1065 IPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQ 1124 Query: 1021 GIEAVFEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVS 1080 GIEAVFEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVS Sbjct: 1125 GIEAVFEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVS 1184 Query: 1081 ERERLQAELDHLRKCLALPAMHWPRGYLKGYPR 1113 ERERLQAELDHLRKCLALPAMHWPRGYLKGYPR Sbjct: 1185 ERERLQAELDHLRKCLALPAMHWPRGYLKGYPR 1217 >gi|55741709 RNA binding motif protein 25 [Homo sapiens] Length = 843 Score = 95.5 bits (236), Expect = 2e-19 Identities = 100/365 (27%), Positives = 162/365 (44%), Gaps = 58/365 (15%) Query: 217 ERMSGLSAERLQMDEELR-REREREREREREREADREREKEREREREKEREQEKEREREK 275 ER S + +R + E+ R RERERERERERERE +RERE+ERERERE+ERE+E+E+++++ Sbjct: 372 ERSSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKR 431 Query: 276 ERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEK 335 +RE + E E+R E++L +A L E+ + T E K +E+ R E Sbjct: 432 DREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERK--KTREYEKEAEREEERRREM 489 Query: 336 LKDAGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLA 395 K+A K ++ L P +AL + + E++ A Sbjct: 490 AKEA-----KRLKEFLEDYDDDRDD-------------PKYYRGSALQKRLRDREKEMEA 531 Query: 396 RQRRLRQEKED----RQSQVSE------FRQQVLEQHLDMGRPP---VPAEAEHRPESTT 442 +R ++EKE+ RQ ++E Q +EQ + R P E+E E Sbjct: 532 DERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQ 591 Query: 443 RPGPNRHEP-GGRDPPQHFGGPPPLISPKPQLHAAPTALWN----------PVSLM---D 488 R EP + P+ P + P + +A N P ++ + Sbjct: 592 EKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSASGNATPNTPGDESPCGIIIPHE 651 Query: 489 NTLETRRAESH----------SLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKRE 538 N+ + ++ E H + P ++ +P+ V F E +++ PRKR+ Sbjct: 652 NSPDQQQPEEHRPKIGLSLKLGASNSPGQPNSVKRKKLPVDSVFNKFEDEDSDDVPRKRK 711 Query: 539 PAPLD 543 PLD Sbjct: 712 LVPLD 716 Score = 84.3 bits (207), Expect = 6e-16 Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 2/77 (2%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 E G + Q E+ RRERERERERERER +RERE+EREREREKE+E+E+ERER+++ Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERERR-EREREREREREREKEKERERERERDRD 350 Query: 277 RERELERQREQRAREKE 293 R+R ER R+ R RE++ Sbjct: 351 RDRTKERDRD-RDRERD 366 Score = 80.5 bits (197), Expect = 8e-15 Identities = 41/72 (56%), Positives = 62/72 (86%), Gaps = 3/72 (4%) Query: 225 ERLQMDEELR-RERERERERE-REREADREREKEREREREKEREQEKEREREKERERELE 282 ER ++++E R RERERERERE RERE +RERE+ERE+E+E+ERE+E++R+R++ +ER+ + Sbjct: 301 ERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRD 360 Query: 283 RQREQ-RAREKE 293 R RE+ R R++E Sbjct: 361 RDRERDRDRDRE 372 Score = 63.2 bits (152), Expect = 1e-09 Identities = 33/81 (40%), Positives = 56/81 (69%), Gaps = 2/81 (2%) Query: 214 LHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQ-EKERE 272 + ++ +S E + + ++ E + ++E+ER+ + +ERERERE+ERE+ E+ERE Sbjct: 269 MEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERE 328 Query: 273 REKERERELERQREQRAREKE 293 RE+ERERE E++RE R RE++ Sbjct: 329 REREREREKEKERE-RERERD 348 Score = 55.1 bits (131), Expect = 4e-07 Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 26/211 (12%) Query: 213 ALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKE-- 270 A + ER+ + E +E ERE ER RE + +R KE + + +R+ K Sbjct: 455 AAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYR 514 Query: 271 ----REREKERERELERQREQRAREKELLAAKALEPSFL------PVAELHGLRGHATEE 320 ++R ++RE+E+E R REKE L + + L P AEL + A Sbjct: 515 GSALQKRLRDREKEMEADERDRKREKEEL--EEIRQRLLAEGHPDPDAELQRMEQEAERR 572 Query: 321 R---------GKPSEQLTPTRAEKLKDAGLQAPKPVQHP-LHPVPTPHHTVPSLISNHG- 369 R + E+ + EK ++ + +P Q P L P P + PS+ S G Sbjct: 573 RQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSASGN 632 Query: 370 -IFSLPSSSAATALLIQRTNEEEKWLARQRR 399 + P + ++I N ++ + R Sbjct: 633 ATPNTPGDESPCGIIIPHENSPDQQQPEEHR 663 Score = 54.3 bits (129), Expect = 6e-07 Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 7/73 (9%) Query: 227 LQMDEELR----REREREREREREREADR-EREKEREREREKEREQEKEREREKE-RERE 280 ++M+E+ R RE + R+ ++ E ++ ++EKER+ ++ RE+E+ERERE+E RERE Sbjct: 267 IEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERE 326 Query: 281 LERQREQRAREKE 293 ER+RE R REKE Sbjct: 327 RERERE-REREKE 338 Score = 33.5 bits (75), Expect = 1.2 Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 35/217 (16%) Query: 639 EERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLT 698 EERRR A+E + + YD D+ + + R A Q L+ ++ + ++ Sbjct: 483 EERRREMAKEAKRLKEFLEDYD--DDRDDPKYYRGSALQKRLR-----DREKEMEADERD 535 Query: 699 TQQQKEELVAQKRRKRRRMLRERSPSPPT-IQSKRQTPSPRLALSTRYSPDEMNNSPNFE 757 +++KEEL R+R+L E P P +Q Q R + P+ S E Sbjct: 536 RKREKEEL----EEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPE----SEEEE 587 Query: 758 EKKKFLTIFNLTHISAEKRKDKERLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEP 817 E+K+ EK + +E +E +QK ++++P S A + P Sbjct: 588 EEKQ------------EKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSASGNATP 635 Query: 818 ATQQASLDVEKPVGVAASLSDIPKAAEPGKLEQVRPQ 854 T E P G+ + P +P E+ RP+ Sbjct: 636 NTP----GDESPCGIIIPHENSPDQQQP---EEHRPK 665 Score = 32.0 bits (71), Expect = 3.3 Identities = 28/146 (19%), Positives = 66/146 (45%), Gaps = 32/146 (21%) Query: 978 QQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFE---------- 1027 ++E R+ +E ++D + + EED+ED + ++ +RK + EA ++ Sbjct: 410 EREREREREREREREREKDKKRDREEDEEDAYERRKL-ERKLREKEAAYQERLKNWEIRE 468 Query: 1028 -----AYQEHIEEQNLERQVLQTQCRRL------------EARHYSLSLTAEQLSHSVAE 1070 Y++ E + R+ + + +RL + ++Y S ++L E Sbjct: 469 RKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKE 528 Query: 1071 LRSQKQKMVSERERLQAELDHLRKCL 1096 + + ++ +R+R + EL+ +R+ L Sbjct: 529 MEADER----DRKREKEELEEIRQRL 550 Score = 30.4 bits (67), Expect = 9.7 Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Query: 974 QHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRK 1018 Q ++ P ++ P ++E + + +E+EE+ +E E+EEE P++K Sbjct: 567 QEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEE-PEQK 610 >gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] Length = 2817 Score = 92.8 bits (229), Expect = 2e-18 Identities = 99/381 (25%), Positives = 161/381 (42%), Gaps = 61/381 (16%) Query: 225 ERLQMDEELR---REREREREREREREADREREKEREREREKEREQEKEREREKEREREL 281 E+ EE+R RE+ERERE+E E+E ++EREKERE++RE+++E+EKE E+E+E++RE+ Sbjct: 496 EKQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREM 555 Query: 282 ERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTP--------TRA 333 E++R+Q +EKEL K E + E +ER K E++ P Sbjct: 556 EKERKQE-KEKELERQKEKEKELQKMKE-QEKECELEKEREKLEEKIEPREPNLEPMVEK 613 Query: 334 EKLKDAGLQAPKPV-------QHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQ- 385 ++ +++ + +PV + P H T P S P + + Q Sbjct: 614 QESENSCNKEEEPVFTRQDSNRSEKEATPVVHETEPESGSQ------PRPAVLSGYFKQF 667 Query: 386 RTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRP-ESTTRP 444 + + ++ +Q +++Q++ +Q Q Q V Q PP P HRP +P Sbjct: 668 QKSLPPRFQRQQEQMKQQQWQQQQQQGVLPQTVPSQPSSSTVPPPP----HRPLYQPMQP 723 Query: 445 GPNRHEPGGRDP----------PQHFGGPPP---------LISPKPQLHAAPTALWNPVS 485 P G DP P+ G P +I PKP + + + Sbjct: 724 HPQHLASMGFDPRWLMMQSYMDPRMMSGRPAMDIPPIHPGMIPPKPLMRR------DQME 777 Query: 486 LMDNTLETRRAESHSLHSHPAAFEPSRQA----AVPLVKVERVFCPEKAEEGPRKREPAP 541 N+ E+ + S H + R P + ++ P+ EE R A Sbjct: 778 GSPNSSESFEHIARSARDHAISLSEPRMLWGSDPYPHAEPQQATTPKATEEPEDVRSEAA 837 Query: 542 LDKYQPPPPPPREGGSLEHQP 562 LD+ Q E LE P Sbjct: 838 LDQEQITAAYSVEHNQLEAHP 858 Score = 37.4 bits (85), Expect = 0.080 Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 5/130 (3%) Query: 966 SSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAV 1025 SS PPP+ QQ PP R+ P + S+++ ++DE + +E Sbjct: 403 SSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVADEDEIWKQRRRQQSEISAAVERA 462 Query: 1026 FEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERER- 1084 + +E EE+ +E Q +L+ L + +Q S E+R ++++ ERE+ Sbjct: 463 RKRREE--EERRMEEQRKAACAEKLKRLDEKLGILEKQ--PSPEEIREREREKEREREKE 518 Query: 1085 LQAELDHLRK 1094 L+ E + R+ Sbjct: 519 LEKEQEQERE 528 Score = 34.7 bits (78), Expect = 0.52 Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 4/119 (3%) Query: 969 RAPPPQHNGQQEPPTARKGPPTQELDRDSE-EEEEEDDEDGEDEEEVPKRKWQGIEAVFE 1027 + P P+ ++E R+ E +++ E E+E E D + + E+E K Q + E Sbjct: 497 KQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREME 556 Query: 1028 AYQEHIEEQNLERQ---VLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERE 1083 ++ +E+ LERQ + Q + + + L E+L + + MV ++E Sbjct: 557 KERKQEKEKELERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPMVEKQE 615 Score = 32.7 bits (73), Expect = 2.0 Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 41/245 (16%) Query: 357 PHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLR------QEKEDRQSQ 410 PHHT + + F P +A +R + E +R+R + Q+ ++++S+ Sbjct: 884 PHHTDAN--NQSACFEAPDQKTLSAPQEERISAVESQPSRKRSVSHGSNHTQKPDEQRSE 941 Query: 411 VSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRP--GPNRHEPGGRDPPQHFGGPPPLIS 468 S +V + +D P E + + E R GP + E + + GP P + Sbjct: 942 PSAGIPKVTSRCIDSKEPIERPEEKPKKEGFIRSSEGP-KPEKVYKSKSETRWGPRPSSN 1000 Query: 469 PKPQLHAAPTALWNPVSL-----MDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVER 523 + +++ P P+ M E R+ + K E+ Sbjct: 1001 RREEVNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGE-------------------KAEK 1041 Query: 524 VFCPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILG 583 V EK P K E L PPPPPP + + +P P AE ST+T Sbjct: 1042 V--TEKVVVKPEKTEKKDL----PPPPPPPQPPAPIQPQSVPPPIQPEAEKFPSTETATL 1095 Query: 584 QQRAS 588 Q+ S Sbjct: 1096 AQKPS 1100 Score = 31.6 bits (70), Expect = 4.4 Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 25/140 (17%) Query: 607 PYRPPVPRAPDP------AYIYDEFLQQRRRLVSKLDL----------EERRRREAQEKG 650 P R VP P P DE +QRRR S++ EE RR E Q K Sbjct: 420 PDRQAVPGRPGPFPSKQQVADEDEIWKQRRRQQSEISAAVERARKRREEEERRMEEQRKA 479 Query: 651 YYYDLDDSYDES--------DEEEVRAHLRCVAEQPPLKLDTSSEK-LEFLQLFGLTTQQ 701 + DE EE+R R + +L+ E+ E + QQ Sbjct: 480 ACAEKLKRLDEKLGILEKQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQ 539 Query: 702 QKEELVAQKRRKRRRMLRER 721 +KE+ + +++ K+R M +ER Sbjct: 540 EKEKELEKEQEKQREMEKER 559 Score = 31.2 bits (69), Expect = 5.7 Identities = 23/120 (19%), Positives = 52/120 (43%), Gaps = 1/120 (0%) Query: 932 QKALQKHKGSVAVLSAEQNHKVDTSVHYNIPELQSSSRAPPPQHNGQQEPPTARKGPPTQ 991 ++ +K + L EQ + + + Q + + Q+E RK + Sbjct: 506 EREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEK 565 Query: 992 ELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQVLQTQCRRLE 1051 EL+R E+E+E +++E +++ + +E E + ++E +E+Q + C + E Sbjct: 566 ELERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPM-VEKQESENSCNKEE 624 Score = 30.8 bits (68), Expect = 7.5 Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 9/140 (6%) Query: 221 GLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERE 280 G E++ + R R RE DR + ++ R+ ++ERE+ KE+E E Sbjct: 978 GPKPEKVYKSKSETRWGPRPSSNRREEVNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGE 1037 Query: 281 -LERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDA 339 E+ E+ + E K L P P ++ + +P + P+ + Sbjct: 1038 KAEKVTEKVVVKPEKTEKKDLPPPPPPPQPPAPIQPQSVPPPIQPEAEKFPS-----TET 1092 Query: 340 GLQAPKPVQ---HPLHPVPT 356 A KP Q PL PV T Sbjct: 1093 ATLAQKPSQDTEKPLEPVST 1112 Score = 30.4 bits (67), Expect = 9.7 Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 12/111 (10%) Query: 986 KGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQVLQT 1045 K P +E+ E+E E +++ E E+E + K + E +E +E+ E + Q Sbjct: 497 KQPSPEEIREREREKEREREKELEKEQEQEREKER------EKDRERQQEKEKELEKEQE 550 Query: 1046 QCRRLE-ARHYSLSLTAEQLSHSVAELRSQKQ-----KMVSERERLQAELD 1090 + R +E R E+ EL+ K+ ++ ERE+L+ +++ Sbjct: 551 KQREMEKERKQEKEKELERQKEKEKELQKMKEQEKECELEKEREKLEEKIE 601 >gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] Length = 1564 Score = 90.1 bits (222), Expect = 1e-17 Identities = 75/219 (34%), Positives = 109/219 (49%), Gaps = 22/219 (10%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKE-REREK 275 E+ L ER + + E RE+ER+RER+R+R+ DRERE+ERER+REKERE+E+E RERE+ Sbjct: 702 EKERELERERAR-EREREREKERDRERDRDRDHDRERERERERDREKEREREREERERER 760 Query: 276 ERERELERQREQ-----RAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTP 330 ERERE ER+RE+ R R+KE + E + R E+R Sbjct: 761 ERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDER 820 Query: 331 TRAEKLKDAGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEE 390 ++ ++ G +P P Q P H+ S N G + LL Q + Sbjct: 821 KSKKRYRNEG--SPSPRQSPKR---RREHSPDSDAYNSG----DDKNEKHRLLSQVVRPQ 871 Query: 391 E------KWLARQRRLRQEKEDRQSQVSEFRQQVLEQHL 423 E L R+ R ++EDR+ + E ++ EQ L Sbjct: 872 ESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQEL 910 Score = 87.0 bits (214), Expect = 9e-17 Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 10/74 (13%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEK----------EREREKERER 279 + E RERER+RERE+ERE +RER +EREREREKER++E+ ERERE++RE+ Sbjct: 688 ERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREK 747 Query: 280 ELERQREQRAREKE 293 E ER+RE+R RE+E Sbjct: 748 EREREREERERERE 761 Score = 86.7 bits (213), Expect = 1e-16 Identities = 38/66 (57%), Positives = 55/66 (83%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 287 + + + RE+ERE ERER RE +REREKER+RER+++R+ ++ERERE+ER+RE ER+RE+ Sbjct: 694 ERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERER 753 Query: 288 RAREKE 293 RE+E Sbjct: 754 EERERE 759 Score = 85.9 bits (211), Expect = 2e-16 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 3/73 (4%) Query: 224 AERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELER 283 A + E RERERERERER+RE ++ERE ERER RE+ERE+EKER+RE++R+R+ +R Sbjct: 676 ARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDR 735 Query: 284 QRE---QRAREKE 293 +RE +R REKE Sbjct: 736 ERERERERDREKE 748 Score = 84.7 bits (208), Expect = 4e-16 Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 7/71 (9%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ-- 287 D R RER+RERER+RE +RERE+ER+REREKERE E+ER RE+ERERE ER RE+ Sbjct: 670 DRRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDR 729 Query: 288 -----RAREKE 293 R RE+E Sbjct: 730 DRDHDRERERE 740 Score = 83.6 bits (205), Expect = 1e-15 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 2/90 (2%) Query: 205 ELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADRERE-KEREREREK 263 EL ER ER D + RERERERER+RE+E +RERE +ERERERE+ Sbjct: 706 ELERERAREREREREKERDRER-DRDRDHDRERERERERDREKEREREREERERERERER 764 Query: 264 EREQEKEREREKERERELERQREQRAREKE 293 ERE+E+ERERE+ RER+ ER+R++ +K+ Sbjct: 765 ERERERERERERARERDKERERQRDWEDKD 794 Score = 75.5 bits (184), Expect = 3e-13 Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 3/79 (3%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 274 H R L + + + + R +R ER RER+ +RER++ERERERE+ER++E+E+ERE Sbjct: 647 HQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKERE 706 Query: 275 KERERELERQREQRAREKE 293 ERER ER+RE REKE Sbjct: 707 LERERARERERE---REKE 722 Score = 68.2 bits (165), Expect = 4e-11 Identities = 34/76 (44%), Positives = 54/76 (71%), Gaps = 2/76 (2%) Query: 214 LHSERMSGLSAERLQMDEELRRERERERERE--REREADREREKEREREREKEREQEKER 271 +HS S S +RLQ + +RERERER R+RE DR+ +K+ R R+++R +E+ER Sbjct: 1286 VHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERER 1345 Query: 272 EREKERERELERQREQ 287 ERE+++ R+L+R+RE+ Sbjct: 1346 ERERDKRRDLDRERER 1361 Score = 60.5 bits (145), Expect = 9e-09 Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 7/108 (6%) Query: 201 RYPP-----ELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERER-EREADRERE 254 RYP + SS H ER + ER Q R + R E ER ER +R + Sbjct: 607 RYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVD 666 Query: 255 KEREREREKEREQEKEREREKERERELERQRE-QRAREKELLAAKALE 301 + +R E+ RE+++ERER++ERERE ER+R+ +R +E+EL +A E Sbjct: 667 RVDDRRDERARERDRERERDRERERERERERDREREKERELERERARE 714 Score = 52.8 bits (125), Expect = 2e-06 Identities = 23/64 (35%), Positives = 42/64 (65%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 289 D++ R R+R+R RERERE +R++ ++ +RERE+ ER+R+++R+R E + + Sbjct: 1328 DKDWPRNRDRDRLRERERERERDKRRDLDRERERLISDSVERDRDRDRDRTFESSQIESV 1387 Query: 290 REKE 293 + E Sbjct: 1388 KRCE 1391 Score = 50.4 bits (119), Expect = 9e-06 Identities = 25/60 (41%), Positives = 39/60 (65%) Query: 235 REREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKEL 294 R+R+R RERERERE D+ R+ +RERER E++R+R+++R E + + E +L Sbjct: 1335 RDRDRLRERERERERDKRRDLDRERERLISDSVERDRDRDRDRTFESSQIESVKRCEAKL 1394 Score = 43.5 bits (101), Expect = 0.001 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 25/104 (24%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE-- 272 HS R S ++R Q+ R+R +ER+R E +RERE+ER ++RE Sbjct: 1273 HSSRRSSPESDR-QVHSRSGSFDSRDRLQERDRY-------EHDRERERERRDTRQREWD 1324 Query: 273 ------------REKERERELERQREQRA---REKELLAAKALE 301 R++ RERE ER+R++R RE+E L + ++E Sbjct: 1325 RDADKDWPRNRDRDRLRERERERERDKRRDLDRERERLISDSVE 1368 Score = 40.8 bits (94), Expect = 0.007 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 10/119 (8%) Query: 172 LRSPFYPIPTPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDE 231 LR P P+ P + H S +R H ER S R + E Sbjct: 367 LRRSASPYPSHSLSSPQRKQSPPRHRSPMREKGRHDH--------ERTSQSHDRRHERRE 418 Query: 232 ELRREREREREREREREADREREKEREREREKEREQEKERE--REKERERELERQREQR 288 + R +R+RE++ ERE ++++ R+ ++E ++R R+ REL R+ R Sbjct: 419 DTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMR 477 Score = 37.4 bits (85), Expect = 0.080 Identities = 105/514 (20%), Positives = 184/514 (35%), Gaps = 75/514 (14%) Query: 234 RRERERE----REREREREADREREKEREREREKEREQEKEREREKERERE---LERQRE 286 RR ER RER + + D + E ++ E KE R + RE+E + ++R Sbjct: 75 RRSPERPTGDLRERMKNKRQDVDTEPQKRNTEESSSPVRKESSRGRHREKEDIKITKERT 134 Query: 287 QRAREKELLAAKALEPS--------FLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKD 338 + E+ + + S ++ L R E K EQ + E++ Sbjct: 135 PESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMK-LEQENMEKREEIII 193 Query: 339 AGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQR 398 +P+ V+ L P P+ + S S P SS+A+ + + L +QR Sbjct: 194 KKEVSPEVVRSKLSPSPSLRKSSKSPKRK----SSPKSSSASKKDRKTSAVSSPLLDQQR 249 Query: 399 RLRQEKEDRQSQVSEFRQQVLEQHLDMGRP-PVPAEAEHRPESTTRPGPNRHEPGGRD-- 455 + + ++ + + + + +G+ + + R E TR G +R GRD Sbjct: 250 NSKTNQSKKKGPRTPSPPPPIPEDIALGKKYKEKYKVKDRIEEKTRDGKDR----GRDFE 305 Query: 456 PPQHFGGPPPLISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPS-RQA 514 + P SP Q H +P+S ++ ++ S HS PS R+ Sbjct: 306 RQREKRDKPRSTSPAGQHH-------SPISSRHHSSSSQSGSSIQRHS------PSPRRK 352 Query: 515 AVPLVKVERVFCP---EKAEEGPRKREPAPLDKYQPP--PPPPREGGSLEHQPFLPGPGP 569 P +R P A P +P K PP P RE G +H+ Sbjct: 353 RTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMREKGRHDHE-------- 404 Query: 570 FLAELEKSTQTILGQQRASLPQAATFGELSGPLKPGSPYRPPVPRAPDPAYIYDEFLQQR 629 +T R + T G+ R + + + R Sbjct: 405 ---------RTSQSHDRRHERREDTRGK-----------RDREKDSREEREYEQDQSSSR 444 Query: 630 RRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAE-QPPLKLDTSSEK 688 + + R RR+A++ +L DS D D E+R + R E + P ++ + Sbjct: 445 DHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDA 504 Query: 689 LEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERS 722 ++ G T ++++ + R R LRE S Sbjct: 505 HDYRDREGRDTHRKEDTYPEESRSYGRNHLREES 538 Score = 33.1 bits (74), Expect = 1.5 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 234 RREREREREREREREADREREKEREREREKEREQEKER---EREKERERELERQRE 286 R++ R E+DR+ ++R QE++R +RE+ERER RQRE Sbjct: 1267 RQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQRE 1322 Score = 31.2 bits (69), Expect = 5.7 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 25/114 (21%) Query: 204 PELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERERERE-ADREREKERERERE 262 PEL ++ S+ D R ER+R ER+ D+ R+ ER R Sbjct: 568 PELPEKGSRGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARDSSFER-RH 626 Query: 263 KEREQEKEREREKE---------RERELER--------------QREQRAREKE 293 ER++ RER++ R ELER +R++RARE++ Sbjct: 627 GERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERD 680 Score = 31.2 bits (69), Expect = 5.7 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 10/126 (7%) Query: 222 LSAERLQMDEELR-RERERERER-EREREADREREKEREREREKEREQEKEREREKERER 279 LS L D + R +E +R+ ER E R + + KE+ +K+REQ + E + R + Sbjct: 876 LSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQ 935 Query: 280 EL-------ERQREQRAREKELLAAKALEPSFLPVAELH-GLRGHATEERGKPSEQLTPT 331 ++ +R+ RA ++ AK + E G+ E + + +P Sbjct: 936 DIIGHHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPK 995 Query: 332 RAEKLK 337 + +K K Sbjct: 996 KGQKKK 1001 >gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo sapiens] Length = 600 Score = 86.3 bits (212), Expect = 1e-16 Identities = 42/69 (60%), Positives = 56/69 (81%), Gaps = 1/69 (1%) Query: 226 RLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQR 285 R + D E R+RER+RERERERE +R+RE+ERERERE+ER++E ER+REKERER+ +RQ Sbjct: 290 RTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQT 349 Query: 286 E-QRAREKE 293 E R R ++ Sbjct: 350 EMDRERNRQ 358 Score = 81.3 bits (199), Expect = 5e-15 Identities = 38/79 (48%), Positives = 58/79 (73%), Gaps = 1/79 (1%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 274 HSER ER + + E R+R+ +RER+R+R+ +REREK+ ERER ERE E+++ERE Sbjct: 205 HSERGRERERER-ETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERE 263 Query: 275 KERERELERQREQRAREKE 293 +ER+R+ +R R Q+ RE++ Sbjct: 264 RERDRDRDRDRRQKERERQ 282 Score = 81.3 bits (199), Expect = 5e-15 Identities = 40/77 (51%), Positives = 58/77 (75%), Gaps = 1/77 (1%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 ER +R Q + E + +R+R+R ER+RE +R+RE++RERERE+ER +++ERERE+E Sbjct: 265 ERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERE 324 Query: 277 RERELERQREQRAREKE 293 RERE +R+ E R REKE Sbjct: 325 RERERQRETE-RDREKE 340 Score = 78.6 bits (192), Expect = 3e-14 Identities = 35/65 (53%), Positives = 51/65 (78%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 287 Q D + +R ER+RE ER+RE RERE+ERER R++ERE+E+ERERE++RE E +R++E+ Sbjct: 282 QTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKER 341 Query: 288 RAREK 292 + K Sbjct: 342 ERKRK 346 Score = 76.6 bits (187), Expect = 1e-13 Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 15/119 (12%) Query: 217 ERMSGLSAERLQMDEELRRERERERER-----EREREADR------EREKEREREREKER 265 ER S ER D+E RER+R+R+R ERER+ DR ER++E ER+RE++R Sbjct: 249 ERASERETER---DKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQR 305 Query: 266 EQEKEREREKERERELERQRE-QRAREKELLAAKALEPSFLPVAELHGLRGHATEERGK 323 E+E+ERER ++RERE ER+RE +R RE E K E E+ R T G+ Sbjct: 306 ERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGR 364 Score = 76.3 bits (186), Expect = 2e-13 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 24/90 (26%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQ-------------------- 267 Q + E RER R+RERERERE +RER++E ER+REKERE+ Sbjct: 304 QRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREG 363 Query: 268 ----EKEREREKERERELERQREQRAREKE 293 E+ERERE+ER+R+ R+RE+R R+++ Sbjct: 364 RRQAERERERERERDRQSAREREERERDRD 393 Score = 75.1 bits (183), Expect = 3e-13 Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 7/118 (5%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEK------EREREKEREREL 281 Q D + RER+R+ E+ERER+ DRER+++ ER R+KERE+EK ERER++E+E + Sbjct: 142 QTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKT 201 Query: 282 ERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATE-ERGKPSEQLTPTRAEKLKD 338 E + +R RE+E E + R TE ER K +E+ + E +D Sbjct: 202 EDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERD 259 Score = 74.3 bits (181), Expect = 6e-13 Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 17/94 (18%) Query: 225 ERLQMDEELRREREREREREREREADREREKERERE--------REKEREQEKEREREKE 276 E+ Q + E R+RER RE++R R+ DR RE++R+RE RE++R++EKER R+KE Sbjct: 67 EKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKE 126 Query: 277 RERELERQRE---------QRAREKELLAAKALE 301 RERE ER+ E QR RE++ A K E Sbjct: 127 RERETEREGERGRDRQTDGQRERERQRDAEKERE 160 Score = 73.6 bits (179), Expect = 1e-12 Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 5/71 (7%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQ--- 284 + E RERER R+RERERE +RERE++RE ER++E+E+E++R+R+ E +RE RQ Sbjct: 302 ERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGR 361 Query: 285 --REQRAREKE 293 R Q RE+E Sbjct: 362 EGRRQAERERE 372 Score = 73.2 bits (178), Expect = 1e-12 Identities = 34/78 (43%), Positives = 57/78 (73%), Gaps = 1/78 (1%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 +R ER + E+ + ERE +R+RER RE DR R+++R RER+++RE+E+ER+ ++E Sbjct: 53 DRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRE 112 Query: 277 RERELERQR-EQRAREKE 293 R+R+ E++R Q+ RE+E Sbjct: 113 RDRQREKERNRQKERERE 130 Score = 72.0 bits (175), Expect = 3e-12 Identities = 38/83 (45%), Positives = 60/83 (72%), Gaps = 7/83 (8%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE---- 272 ER + ER + + R+R+R+ ERERE++A+RER ERE ER+KERE+E++R+ Sbjct: 215 ERETETETERKRQTDR-ERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRD 273 Query: 273 -REKERERELERQREQRA-REKE 293 R+KERER+ +R+R++R R++E Sbjct: 274 RRQKERERQTDRKRQRRTERDRE 296 Score = 72.0 bits (175), Expect = 3e-12 Identities = 35/67 (52%), Positives = 53/67 (79%), Gaps = 2/67 (2%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 286 Q + E ERE ER++ERERE DR+R+++R R++E+ER+ +++R+R ER+RE ER+RE Sbjct: 245 QAERERASERETERDKERERERDRDRDRDR-RQKERERQTDRKRQRRTERDRETERKRER 303 Query: 287 QRAREKE 293 QR RE+E Sbjct: 304 QRERERE 310 Score = 71.6 bits (174), Expect = 4e-12 Identities = 43/88 (48%), Positives = 61/88 (69%), Gaps = 11/88 (12%) Query: 216 SERMSGLSAERLQMDE-ELRREREREREREREREADREREKERERER--------EKERE 266 +ER AER + E E R++ERERER+R+R+ DR R+KERER+ E++RE Sbjct: 238 TEREREKQAERERASERETERDKERERERDRDRDRDR-RQKERERQTDRKRQRRTERDRE 296 Query: 267 QEKEREREKERERELERQRE-QRAREKE 293 E++RER++ERERE ER R+ +R RE+E Sbjct: 297 TERKRERQRERERERERNRKRERERERE 324 Score = 70.9 bits (172), Expect = 7e-12 Identities = 34/79 (43%), Positives = 56/79 (70%), Gaps = 1/79 (1%) Query: 216 SERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREK 275 +ER ER + R ERER+R+R+R++E +R+ EK+R+ +RE E+++E+E++RE Sbjct: 367 AERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRES 426 Query: 276 ERERELERQRE-QRAREKE 293 ER RE R+RE Q+ RE++ Sbjct: 427 ERGRERGREREKQKGRERD 445 Score = 70.5 bits (171), Expect = 8e-12 Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 28/144 (19%) Query: 215 HSERMSGLSAER-LQMDEELRREREREREREREREAD----------------REREKER 257 H ER ER Q D E R+RE+ER R++ERE + RERE++R Sbjct: 94 HRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQR 153 Query: 258 EREREKEREQEKEREREKERERELERQRE---QRAREKELLAAKALEPSFLPVAELHGLR 314 + E+E+ER+ ++ER+R+ ER R+ ER+RE Q RE+E K + + H R Sbjct: 154 DAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENK-----TEDRHSER 208 Query: 315 GHATEERGKPSEQLTPTRAEKLKD 338 G ER + E T T ++ D Sbjct: 209 G---RERERERETETETERKRQTD 229 Score = 70.5 bits (171), Expect = 8e-12 Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 23/99 (23%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKERERER--------------- 261 ER ER + + + RERERERERER+RE +R+REKERER+R Sbjct: 302 ERQRERERER-ERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTG 360 Query: 262 -------EKEREQEKEREREKERERELERQREQRAREKE 293 E+ERE+E+ER+R+ RERE + R R+KE Sbjct: 361 REGRRQAERERERERERDRQSAREREERERDRDRDRQKE 399 Score = 70.5 bits (171), Expect = 8e-12 Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 10/77 (12%) Query: 226 RLQMDEELRRERERERE-----REREREADREREKEREREREKER----EQEKEREREKE 276 R Q + E RERER+R+ ERER+ DR+R+KERER+ EK+R E EK+REREK+ Sbjct: 364 RRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKD 423 Query: 277 RERELERQREQRAREKE 293 RE E R+R R REK+ Sbjct: 424 RESERGRER-GREREKQ 439 Score = 70.1 bits (170), Expect = 1e-11 Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 1/91 (1%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 ER + ER + + + R+R++ERER+ E++ D +RE E++REREK+RE E+ RER +E Sbjct: 376 ERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGRE 435 Query: 277 RERELERQREQRAREKELLAAKALEPSFLPV 307 RE++ R+R+ R R+ + A + + S L V Sbjct: 436 REKQKGRERD-RERQTDRQAGRQRKRSTLYV 465 Score = 69.7 bits (169), Expect = 1e-11 Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 14/83 (16%) Query: 225 ERLQMDEELRRERERERERERE------------READREREKEREREREKEREQ--EKE 270 E+ E+ ER RERERERE RE DR+R+ ERERE++ ERE+ E+E Sbjct: 196 EKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERE 255 Query: 271 REREKERERELERQREQRAREKE 293 ER+KERERE +R R++ R+KE Sbjct: 256 TERDKERERERDRDRDRDRRQKE 278 Score = 69.3 bits (168), Expect = 2e-11 Identities = 66/236 (27%), Positives = 100/236 (42%), Gaps = 54/236 (22%) Query: 221 GLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERE 280 G ER + E RR +R+ ERE +R+ +R REK+R R+R++ R E++R+REKERER+ Sbjct: 51 GDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHR--ERQRDREKERERQ 108 Query: 281 LERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAG 340 +R+R+ R REKE K E E G RG + G+ E+ +DA Sbjct: 109 TDRERD-RQREKERNRQKERERE----TEREGERGRDRQTDGQ-------RERERQRDAE 156 Query: 341 LQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQR-R 399 + + QR E + R+R + Sbjct: 157 KERERQTDRER---------------------------------QRQTERNRQKEREREK 183 Query: 400 LRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRD 455 RQE+ +R+ Q E + ++H + GR E E E+ T R RD Sbjct: 184 NRQERRERERQ-REKENKTEDRHSERGR-----ERERERETETETERKRQTDRERD 233 Score = 68.6 bits (166), Expect = 3e-11 Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 19/104 (18%) Query: 217 ERMSGLSAER-LQMDEELRREREREREREREREADREREKEREREREKE----------- 264 ER ER Q D E +R+ ER R++ERERE +R+ +ERER+REKE Sbjct: 150 ERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERG 209 Query: 265 --REQEKEREREKERERELERQRE-----QRAREKELLAAKALE 301 RE+E+E E E ER+R+ +R+R+ +R REK+ +A E Sbjct: 210 RERERERETETETERKRQTDRERDRQRKTEREREKQAERERASE 253 Score = 67.0 bits (162), Expect = 9e-11 Identities = 38/89 (42%), Positives = 62/89 (69%), Gaps = 5/89 (5%) Query: 216 SERMSGLSAERLQMDEELRRERERERERE---REREADREREKEREREREKEREQEKERE 272 +ER ER + +E RRERER+RE+E +R ++R RE+ERERE E E E++++ + Sbjct: 171 TERNRQKEREREKNRQE-RRERERQREKENKTEDRHSERGRERERERETETETERKRQTD 229 Query: 273 REKERERELERQREQRAREKELLAAKALE 301 RE++R+R+ ER+RE++A E+E + + E Sbjct: 230 RERDRQRKTEREREKQA-ERERASERETE 257 >gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] Length = 904 Score = 81.3 bits (199), Expect = 5e-15 Identities = 178/852 (20%), Positives = 305/852 (35%), Gaps = 172/852 (20%) Query: 232 ELRREREREREREREREADREREKEREREREKEREQEKEREREKER--ERELERQREQRA 289 EL++E ++R+ E+E+ A +++ E + +R+KE ++ +RE+ R R R R Sbjct: 125 ELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRR 184 Query: 290 REKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQ------- 342 R + + S P E+ + + +L P + K+K+ +Q Sbjct: 185 RSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPEL-PEPSVKVKEPSVQEATSTSD 243 Query: 343 ---APKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRR 399 PKP P+P P P S ++ E+EK R R Sbjct: 244 ILKVPKP-----EPIPEPKEPSPEKNS------------------KKEKEKEKTRPRSRS 280 Query: 400 LRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQH 459 R + R S + +H R P RP RP P R R PP+ Sbjct: 281 -RSKSRSRTRSRSPSHTRPRRRHRSRSRSYSP---RRRPSPRRRPSPRR-----RTPPRR 331 Query: 460 FGGPPPLISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLV 519 PPP P+ + +P + RR S SL ++ SR + P Sbjct: 332 M--PPP---PRHRRSRSP-------------VRRRRRSSASLSGSSSSSSSSRSRSPPKK 373 Query: 520 KVERVFCPEKAEEGPRKREPAPLDKYQPPP---PPPREGGSLEHQPFLPGPGPFLAELEK 576 +R P + P +++P P PPP+ S P P ++ Sbjct: 374 PPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHS-------PTP-------QQ 419 Query: 577 STQTILGQQRASLPQAATFGELS---GPLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLV 633 S +T + R S+ T G+++ G K SP P PR + + + + ++ Sbjct: 420 SNRT--RKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVE---LSESEEDKGGKMA 474 Query: 634 SKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHL--------------RCVAEQP- 678 + +++RR+ Q + D S DE R+H+ R + P Sbjct: 475 AADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPR 534 Query: 679 PLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRML---RERSPSPPTIQSKRQTP 735 + +TS T++++ A R+RR R R+PSPP +R++P Sbjct: 535 KRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPP---PRRRSP 591 Query: 736 SPRL---ALSTRYSPD--------------EMNNSPNFEEKKKFLTIFNLTHISAEKRKD 778 SPR + RYSP + SP+ K++ ++H K++ Sbjct: 592 SPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR------VSHSPPPKQRS 645 Query: 779 K---ERLVEMLRAMKQKALSAAVADSLTNSP----RDSPAVSLSEPATQQASLDV----- 826 +R L + +K S + + SP R SP+ P T + V Sbjct: 646 SPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGAS 705 Query: 827 ------EKPVGVAASLSDIPKAAEPGKLEQV---RPQELSRVQELAPASGEKARLSEAPG 877 + P + + + EP K+++ PQ + RV SG S P Sbjct: 706 SSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSG-----SPEPA 760 Query: 878 GKKSLSMLHYIRGAAPK---DIPVPLSHSTNGKSKPWEPFVA-EEFAHQFHESVLQSTQK 933 KK + ++ +P VP+ + + P P + +E + + K Sbjct: 761 AKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHK 820 Query: 934 ALQKHKGSVAVLSAEQNHKVDTSVHYNIPELQSSSRAPPPQHNGQQEPPTARKGPPTQEL 993 +KHK + HK + +V + + QE P A P + Sbjct: 821 KDKKHK-------KHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQEEPVA---APEPKK 870 Query: 994 DRDSEEEEEEDD 1005 + +SE E+ DD Sbjct: 871 ETESEAEDNLDD 882 >gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] Length = 202 Score = 79.0 bits (193), Expect = 2e-14 Identities = 35/73 (47%), Positives = 54/73 (73%) Query: 216 SERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREK 275 +ER ER E R R+R+R RER+R+ DRE+E+ER++ER+++R++E+E ERE Sbjct: 17 TERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERET 76 Query: 276 ERERELERQREQR 288 ER+RE +RQRE++ Sbjct: 77 ERQRERQRQRERK 89 Score = 75.5 bits (184), Expect = 3e-13 Identities = 37/79 (46%), Positives = 58/79 (73%), Gaps = 13/79 (16%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKE------------REQEKEREREK 275 + + E R+RER+R+RER+R+ DRER+K+R+RER++E RE++K+ ERE+ Sbjct: 71 ETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERER 130 Query: 276 ERERELERQRE-QRAREKE 293 +RERE +RQRE +R R++E Sbjct: 131 DRERERQRQRERERQRQRE 149 Score = 75.1 bits (183), Expect = 3e-13 Identities = 41/83 (49%), Positives = 61/83 (73%), Gaps = 6/83 (7%) Query: 216 SERMSGLSAERLQMDEELR---REREREREREREREADREREKERE--REREKEREQEKE 270 +ER + ER + E R RER+++R+RER+RE DR RE+ R+ RER+K+ E+E++ Sbjct: 72 TERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERD 131 Query: 271 REREKERERELERQREQRAREKE 293 RERE++R+RE ERQR QR R++E Sbjct: 132 RERERQRQRERERQR-QRERKRE 153 Score = 73.6 bits (179), Expect = 1e-12 Identities = 32/66 (48%), Positives = 54/66 (81%), Gaps = 1/66 (1%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 286 Q D E RER++ER+R+R+RE + ERE ER+RER+++RE++++ +RE++++R+ ER+RE Sbjct: 49 QTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRET 108 Query: 287 QRAREK 292 R RE+ Sbjct: 109 DRNRER 114 Score = 73.2 bits (178), Expect = 1e-12 Identities = 30/61 (49%), Positives = 50/61 (81%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 287 + D + RE+ERER++ER+R+ RERE ERE ER++ER++++ER+R+ +RER+ +R RE+ Sbjct: 45 ERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRER 104 Query: 288 R 288 + Sbjct: 105 K 105 Score = 72.4 bits (176), Expect = 2e-12 Identities = 33/84 (39%), Positives = 61/84 (72%), Gaps = 6/84 (7%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 274 H ER E+ + + + R+R+R+RERE ERE +R+RE++R+RER+++ ++E++++R+ Sbjct: 43 HRERDRQTDREK-ERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRD 101 Query: 275 KERERELERQREQ-----RAREKE 293 +ER+RE +R RE+ R R+K+ Sbjct: 102 RERKRETDRNRERNRKGGRERDKQ 125 Score = 72.0 bits (175), Expect = 3e-12 Identities = 39/75 (52%), Positives = 55/75 (73%), Gaps = 12/75 (16%) Query: 231 EELRRERERERERE-------REREADREREKEREREREKEREQEKEREREKEREREL-- 281 +E RER+R+RERE R R+ DR RE++R+ +REKERE++KER+R+++RERE Sbjct: 15 KETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETER 74 Query: 282 --ERQRE-QRAREKE 293 ERQRE QR RE++ Sbjct: 75 ETERQRERQRQRERK 89 Score = 72.0 bits (175), Expect = 3e-12 Identities = 31/66 (46%), Positives = 56/66 (84%), Gaps = 1/66 (1%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 287 + D++ RER+RERER+R+RE +R+R++ER+RE ++ER++ ERE E+++ER+ ER++E+ Sbjct: 121 ERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAERE-ERKKERKKERKKER 179 Query: 288 RAREKE 293 + ++KE Sbjct: 180 KEKKKE 185 Score = 71.2 bits (173), Expect = 5e-12 Identities = 30/64 (46%), Positives = 51/64 (79%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 289 + E R+ RER+++ ERE DRERE++R+RERE++R++E++RE ++ER+R ER+ ++ Sbjct: 111 NRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKE 170 Query: 290 REKE 293 R+KE Sbjct: 171 RKKE 174 Score = 70.9 bits (172), Expect = 7e-12 Identities = 32/70 (45%), Positives = 53/70 (75%), Gaps = 6/70 (8%) Query: 230 DEELRRERERERER------EREREADREREKEREREREKEREQEKEREREKERERELER 283 D E +RE +R RER ER+++ +RER++ERER+R++ERE++++RER++E +RE +R Sbjct: 101 DRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQR 160 Query: 284 QREQRAREKE 293 E+ R+KE Sbjct: 161 WAEREERKKE 170 Score = 70.1 bits (170), Expect = 1e-11 Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 4/80 (5%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 ER ER D + R+RE +R RER R+ RER+K+ ERER++ERE++++RERE++ Sbjct: 87 ERKRQTDRER-DKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQ 145 Query: 277 RERELERQRE---QRAREKE 293 R+RE +R+ + QR E+E Sbjct: 146 RQRERKRETDRERQRWAERE 165 Score = 68.9 bits (167), Expect = 2e-11 Identities = 33/74 (44%), Positives = 54/74 (72%), Gaps = 8/74 (10%) Query: 228 QMDEELRREREREREREREREADRE---REKEREREREKEREQEKEREREKERERELERQ 284 + D ERER+R+RERE + +RE R+++R RER+++ ++EKERER+KER+R+ +R+ Sbjct: 10 ETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRE 69 Query: 285 RE-----QRAREKE 293 RE +R RE++ Sbjct: 70 RETERETERQRERQ 83 Score = 68.6 bits (166), Expect = 3e-11 Identities = 28/66 (42%), Positives = 51/66 (77%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 287 + D R R+ RER+++ E +R+RE+ER+R+RE+ER++++ER+RE +RER+ +RE+ Sbjct: 107 ETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREE 166 Query: 288 RAREKE 293 R +E++ Sbjct: 167 RKKERK 172 Score = 68.2 bits (165), Expect = 4e-11 Identities = 30/79 (37%), Positives = 59/79 (74%), Gaps = 1/79 (1%) Query: 225 ERLQMDEELRREREREREREREREADREREKEREREREKEREQ-EKEREREKERERELER 283 ++ + + + RER+R+RERER+R+ +R+RE +RER+R ERE+ +KER++E+++ER+ ++ Sbjct: 124 KQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKK 183 Query: 284 QREQRAREKELLAAKALEP 302 + E+R +K+ + + P Sbjct: 184 KEEKRREDKKRKWGEGISP 202 Score = 67.0 bits (162), Expect = 9e-11 Identities = 34/72 (47%), Positives = 51/72 (70%), Gaps = 8/72 (11%) Query: 229 MDEELRREREREREREREREADREREKE-------REREREKEREQEKEREREKEREREL 281 M+ + R+RE +R +E ERE DR+RE+E R R+R++ RE++++ +REKERER+ Sbjct: 1 MERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQK 60 Query: 282 ERQREQRAREKE 293 ER R QR RE+E Sbjct: 61 ERDR-QRQRERE 71 Score = 66.6 bits (161), Expect = 1e-10 Identities = 29/67 (43%), Positives = 54/67 (80%), Gaps = 5/67 (7%) Query: 232 ELRREREREREREREREADREREKEREREREKEREQEKER-----EREKERERELERQRE 286 E ++ ERER+RERER+ RERE++R+RER++E ++E++R ER+KER++E +++R+ Sbjct: 121 ERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERK 180 Query: 287 QRAREKE 293 ++ +E++ Sbjct: 181 EKKKEEK 187 Score = 40.0 bits (92), Expect = 0.012 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 8/62 (12%) Query: 217 ERMSGLSAERLQMDEELRRERERER-------EREREREADREREKEREREREKEREQEK 269 ER ER Q E +RE +RER ER++ER+ +R++E++ +++ EK RE +K Sbjct: 135 ERQRQRERER-QRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEKRREDKK 193 Query: 270 ER 271 + Sbjct: 194 RK 195 >gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] Length = 953 Score = 79.0 bits (193), Expect = 2e-14 Identities = 143/661 (21%), Positives = 237/661 (35%), Gaps = 142/661 (21%) Query: 226 RLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQR 285 R+Q E RERERERERE +R+RE+ERERER++ERE+ ++RERE+ERE E +++R Sbjct: 389 RVQYTETEPYHNYRERERERERE-NRQRERERERERDRERER-RQREREREREHERDKER 446 Query: 286 EQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPK 345 ++R E E AK E R H +R K E+ K+ G P+ Sbjct: 447 QRRKEEWERERAKRDEKD----------RQHRDRDREK----------EREKEKGKPKPR 486 Query: 346 PVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKE 405 Q P P +A T ++R +E W RR + K+ Sbjct: 487 SPQPPSRQAEPP----------------KKEAATTGPQVKRADE---WKDPWRRSKSPKK 527 Query: 406 DRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPP 465 VS P A + +++ N R G Sbjct: 528 KLGVSVS----------------PSRARRRRKTSASSASASNSSRSSSRSSSYSGSG--- 568 Query: 466 LISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVF 525 S + + ++ + ++ S ++ R+ S S S P+ PS Sbjct: 569 --SSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRSFSSSPS---PS-------------- 609 Query: 526 CPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQ 585 P P+ K +P PPP + G E P P P + K+T Sbjct: 610 ------PTPSPHRPSIRTKGEPAPPPGKAG---EKSVKKPAPPPAPPQATKTT------- 653 Query: 586 RASLPQAATFGELSGPLKPGSPYRPPVPR------APDPAYIYDEFLQQRRRLVSKLDLE 639 A +P+ G+ + P R P R Y + R L Sbjct: 654 -APVPEPTKPGDPREARRKERPARTPPRRRTLSGSGSGSGSSYSGSSSRSRSLSVSSVSS 712 Query: 640 ERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTT 699 + + D +D Y ++ + + + + P T EK Sbjct: 713 VSSATSSSSSAHSVDSEDMY-----ADLASPVSSASSRSPAPAQTRKEK----------G 757 Query: 700 QQQKEELVAQKRRKRRRMLR-ERSPSPPTIQSKRQTPS-PRLALSTRYSPDEMNNSPNFE 757 + +KE+ V +++RKR + +S PP Q PS P+ A P + Sbjct: 758 KSKKEDGVKEEKRKRDSSTQPPKSAKPPAGGKSSQQPSTPQQA-----PPGQPQQGTFVA 812 Query: 758 EKKKFLTIFNLTHISAEKRK----DKERL---------VEMLRAMKQKALSAAVADSLTN 804 K+ LT+ N +++ DK+R R + + + Sbjct: 813 HKEIKLTLLNKAADKGSRKRYEPSDKDRQSPPPAKRPNTSPDRGSRDRKSGGRLGSPKPE 872 Query: 805 SPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP-KAAEPG--KLEQVRPQELSRVQE 861 R + + + PA ++ L + ++ ++ +P KA++PG + + LSR +E Sbjct: 873 RQRGQNSKAPAAPADRKRQLSPQSK--SSSKVTSVPGKASDPGAASTKSGKASTLSRREE 930 Query: 862 L 862 L Sbjct: 931 L 931 Score = 74.3 bits (181), Expect = 6e-13 Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 2/71 (2%) Query: 225 ERLQMDEELRRERERERERERERE-ADREREKEREREREKEREQEKER-EREKERERELE 282 ER + E +RERERERER+RERE RERE+ERE ER+KER++ KE ERE+ + E + Sbjct: 405 ERERERENRQRERERERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKD 464 Query: 283 RQREQRAREKE 293 RQ R REKE Sbjct: 465 RQHRDRDREKE 475 Score = 60.8 bits (146), Expect = 7e-09 Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 4/60 (6%) Query: 225 ERLQMDEELRREREREREREREREADREREKER-EREREKERE---QEKEREREKERERE 280 ER + E RR+RERERERE ER+ +R+R KE ERER K E Q ++R+REKERE+E Sbjct: 420 ERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKDRQHRDRDREKEREKE 479 Score = 58.9 bits (141), Expect = 3e-08 Identities = 86/392 (21%), Positives = 140/392 (35%), Gaps = 49/392 (12%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREA-DREREKERERERE-KEREQEKERERE 274 ER ER Q + E RE ER++ER+R +E +RER K E++R+ ++R++EKERE+E Sbjct: 420 ERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKDRQHRDRDREKEREKE 479 Query: 275 KERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAE 334 K + + Q R E A P E + + K ++P+RA Sbjct: 480 KGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRAR 539 Query: 335 KLKDAGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWL 394 + + + + + S S G S S++ + R++ + Sbjct: 540 RRRKTSASSASASN------SSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFS 593 Query: 395 ARQRRLR--QEKEDRQSQVSEFRQQVLEQHLDMGRP----------PVPAEAEHRPESTT 442 + R R S R + + P P P A + TT Sbjct: 594 GSRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAPPPAPPQATKTT 653 Query: 443 RPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTALWNPVSLMDNTLETR-------- 494 P P +PG DP + P +P + + + + S ++ +R Sbjct: 654 APVPEPTKPG--DPREARRKERPARTPPRRRTLSGSGSGSGSSYSGSSSRSRSLSVSSVS 711 Query: 495 -----RAESHSLHS-----------HPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKRE 538 + S S HS P + SR A + E+ K E+G ++ + Sbjct: 712 SVSSATSSSSSAHSVDSEDMYADLASPVSSASSRSPAPAQTRKEK--GKSKKEDGVKEEK 769 Query: 539 PAPLDKYQPP-PPPPREGGSLEHQPFLPGPGP 569 QPP P GG QP P P Sbjct: 770 RKRDSSTQPPKSAKPPAGGKSSQQPSTPQQAP 801 Score = 58.5 bits (140), Expect = 3e-08 Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 2/64 (3%) Query: 225 ERLQMDEELRREREREREREREREADREREKERER-EREKEREQEKEREREKERERELER 283 ER + + R R+RERERERE E D+ER++ +E ERE+ + EK+R+ ++R+RE ER Sbjct: 418 ERERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKDRQ-HRDRDREKER 476 Query: 284 QREQ 287 ++E+ Sbjct: 477 EKEK 480 Score = 31.2 bits (69), Expect = 5.7 Identities = 78/390 (20%), Positives = 141/390 (36%), Gaps = 43/390 (11%) Query: 627 QQRRRLVSKLDLEERRRREA--QEKGYYYDLDDSYDESDEEEVRAHLRCVAEQPPLKLDT 684 ++ R + D E +RR+E +E+ + D + + D E+ R + + P Sbjct: 433 EREREREHERDKERQRRKEEWERERAKRDEKDRQHRDRDREKEREKEK--GKPKPRSPQP 490 Query: 685 SSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRER------SPSPPTIQSKRQTPSPR 738 S + E + TT Q + K RR ++ SPS + K S Sbjct: 491 PSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRRRKTSASSAS 550 Query: 739 LALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKERLVEMLRAMKQKALSAAV 798 + S+R S + S + + + + ++ S R + R+ + ++ S++ Sbjct: 551 ASNSSRSSSRSSSYSGSGSSRSRSRSS---SYSSYSSRSSRHSSFSGSRS-RSRSFSSSP 606 Query: 799 ADSLTNSPRDSPAVSLSEPAT---QQASLDVEKPVGVAA------SLSDIPKAAEPGKLE 849 + S T SP + EPA + V+KP A + + +P+ +PG Sbjct: 607 SPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAPPPAPPQATKTTAPVPEPTKPGDPR 666 Query: 850 QVRPQELS------RVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPLSHS 903 + R +E R SG + S + +SLS+ ++ + S S Sbjct: 667 EARRKERPARTPPRRRTLSGSGSGSGSSYSGSSSRSRSLSV------SSVSSVSSATSSS 720 Query: 904 TNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSA--EQNHKVDTSVHYNI 961 ++ S E A+ + S +K KG E+ K D+S Sbjct: 721 SSAHSVDSEDMYADLASPVSSASSRSPAPAQTRKEKGKSKKEDGVKEEKRKRDSSTQ--- 777 Query: 962 PELQSSSRAPPPQHNGQQEPPTARKGPPTQ 991 S PP Q+P T ++ PP Q Sbjct: 778 ---PPKSAKPPAGGKSSQQPSTPQQAPPGQ 804 >gi|116089325 splicing factor, arginine/serine-rich 12 isoform a [Homo sapiens] Length = 624 Score = 77.4 bits (189), Expect = 7e-14 Identities = 33/67 (49%), Positives = 57/67 (85%), Gaps = 1/67 (1%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 286 + D E RERE+ERE+E+ER +++R+KERE++REK++E+++EREREKE E++ ++++E Sbjct: 392 EKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEK 451 Query: 287 QRAREKE 293 ++ +EKE Sbjct: 452 EQDKEKE 458 Score = 76.3 bits (186), Expect = 2e-13 Identities = 37/82 (45%), Positives = 62/82 (75%), Gaps = 4/82 (4%) Query: 215 HSERMSGLSAERLQMDEELR---REREREREREREREADREREKEREREREKEREQEKER 271 HS + E+++ E ++ RE+ERERE+ERE+E +R + K+R++EREK+RE++KE+ Sbjct: 372 HSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEK 431 Query: 272 EREKERERELERQREQRAREKE 293 +RE+ERE+E E+ R+ + +EKE Sbjct: 432 DREREREKEHEKDRD-KEKEKE 452 Score = 73.2 bits (178), Expect = 1e-12 Identities = 27/63 (42%), Positives = 53/63 (84%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 289 D + RE++RE+++E++RE +RE+E E++R++EKE+EQ+KE+EREK+R +E++ +R++ Sbjct: 416 DRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDK 475 Query: 290 REK 292 + + Sbjct: 476 KSR 478 Score = 70.1 bits (170), Expect = 1e-11 Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 14/137 (10%) Query: 204 PELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKERERE--- 260 P S R S ++ + E +E+ER +E++RE+E +RE+E+E+E+E Sbjct: 354 PHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGK 413 Query: 261 ---REKEREQEKEREREKERERELERQREQ-RAREKELLAAKALEPSFLPVAELHGLRGH 316 R+KERE+++E+++EK+RERE E++ E+ R +EKE K E E+ Sbjct: 414 NKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEI------ 467 Query: 317 ATEERGKPSEQLTPTRA 333 E+R K + TP R+ Sbjct: 468 -DEKRKKDKKSRTPPRS 483 Score = 58.9 bits (141), Expect = 3e-08 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 274 H+ S R +R + RER + R R R++ K+ RE+ KE+E+ KE++RE Sbjct: 338 HNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT-REKIKEKERVKEKDRE 396 Query: 275 KERERELERQRE-QRAREKE 293 KERERE ER++E +R + K+ Sbjct: 397 KEREREKEREKEKERGKNKD 416 Score = 57.0 bits (136), Expect = 1e-07 Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 3/89 (3%) Query: 207 SHSSLAALHSERMSGLSAERLQM-DEELRREREREREREREREADREREKEREREREKER 265 SH+ + +R S + + E R+ R R R++ ++ RE+ KE+ER +EK+R Sbjct: 337 SHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT-REKIKEKERVKEKDR 395 Query: 266 EQEKEREREKERERELERQREQ-RAREKE 293 E+E+ERE+E+E+E+E + +++ + REK+ Sbjct: 396 EKEREREKEREKEKERGKNKDRDKEREKD 424 Score = 53.5 bits (127), Expect = 1e-06 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKERERERE-KEREQEKERER 273 H R S R Q D + ++R + RER R R R++ ++ +E+ +EKER + Sbjct: 333 HRSRSHNRSRSR-QKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVK 391 Query: 274 EKERERELERQREQRAREKE 293 EK+RE+E ER++E R +EKE Sbjct: 392 EKDREKEREREKE-REKEKE 410 Score = 50.1 bits (118), Expect = 1e-05 Identities = 27/89 (30%), Positives = 39/89 (43%) Query: 204 PELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREK 263 PE S+ R S R RR+R + + R R R R+K+R R + Sbjct: 295 PESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSP 354 Query: 264 EREQEKEREREKERERELERQREQRAREK 292 +++ K RER K R R R + + REK Sbjct: 355 HKKRSKSRERRKSRSRSHSRDKRKDTREK 383 Score = 47.0 bits (110), Expect = 1e-04 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 9/85 (10%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE-- 272 HS R S R + R R R+++R R + ++R K RER + + R +++ Sbjct: 323 HSRRKRSQSKHRSRSHN---RSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKD 379 Query: 273 -REK--ERERELERQRE-QRAREKE 293 REK E+ER E+ RE +R REKE Sbjct: 380 TREKIKEKERVKEKDREKEREREKE 404 Score = 38.5 bits (88), Expect = 0.036 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 20/84 (23%) Query: 230 DEELRREREREREREREREADREREKE--------------------REREREKEREQEK 269 ++E +++E+ERE++R +E D +R+K+ RER R + R + Sbjct: 448 EKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSR 507 Query: 270 EREREKERERELERQREQRAREKE 293 K +R+ R R+R K+ Sbjct: 508 SPRTSKTIKRKSSRSPSPRSRNKK 531 Score = 37.7 bits (86), Expect = 0.061 Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 235 REREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKE 293 R RER R R R + R + +R+ R +K+++RE ER RE+E Sbjct: 491 RSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERE 549 Score = 34.7 bits (78), Expect = 0.52 Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 237 REREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLA 296 RER R R R K +R+ + +++K+RE+E + E+R RE+ Sbjct: 495 RERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSM 554 Query: 297 AKA 299 K+ Sbjct: 555 RKS 557 Score = 33.1 bits (74), Expect = 1.5 Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 8/101 (7%) Query: 201 RYPPELSHSSLAALHSER-----MSGLSAERLQMDEELRREREREREREREREADREREK 255 R PP ++S + S R S S+ + + ++R+ R + D++REK Sbjct: 478 RTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREK 537 Query: 256 EREREREKEREQEKEREREKERERELERQREQRA---REKE 293 ER+ E+ + R+ +R+ + + E+ + +EKE Sbjct: 538 ERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKE 578 Score = 32.3 bits (72), Expect = 2.6 Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Query: 210 SLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEK 269 S ++ S R S + R +++++RE+ER+ ER +ERER + Sbjct: 502 SRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISER-RERERSTSMRKSSND 560 Query: 270 EREREKERERELERQREQRAREKELLAAKALEPSFLPVAE 309 +EK + + ++ +E + +K ++ P E Sbjct: 561 RDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTE 600 Score = 31.2 bits (69), Expect = 5.7 Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 10/79 (12%) Query: 226 RLQMDEELRRERERE---REREREREA-------DREREKEREREREKEREQEKEREREK 275 R + ++ +RE+ER+ RERER DR+ +++ E+ +E+E +E + Sbjct: 526 RSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDS 585 Query: 276 ERERELERQREQRAREKEL 294 +E++ + R E ++ Sbjct: 586 SVSKEVDDKDAPRTEENKI 604 >gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [Homo sapiens] Length = 508 Score = 77.4 bits (189), Expect = 7e-14 Identities = 33/67 (49%), Positives = 57/67 (85%), Gaps = 1/67 (1%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 286 + D E RERE+ERE+E+ER +++R+KERE++REK++E+++EREREKE E++ ++++E Sbjct: 276 EKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEK 335 Query: 287 QRAREKE 293 ++ +EKE Sbjct: 336 EQDKEKE 342 Score = 76.3 bits (186), Expect = 2e-13 Identities = 37/82 (45%), Positives = 62/82 (75%), Gaps = 4/82 (4%) Query: 215 HSERMSGLSAERLQMDEELR---REREREREREREREADREREKEREREREKEREQEKER 271 HS + E+++ E ++ RE+ERERE+ERE+E +R + K+R++EREK+RE++KE+ Sbjct: 256 HSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEK 315 Query: 272 EREKERERELERQREQRAREKE 293 +RE+ERE+E E+ R+ + +EKE Sbjct: 316 DREREREKEHEKDRD-KEKEKE 336 Score = 73.2 bits (178), Expect = 1e-12 Identities = 27/63 (42%), Positives = 53/63 (84%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 289 D + RE++RE+++E++RE +RE+E E++R++EKE+EQ+KE+EREK+R +E++ +R++ Sbjct: 300 DRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDK 359 Query: 290 REK 292 + + Sbjct: 360 KSR 362 Score = 70.1 bits (170), Expect = 1e-11 Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 14/137 (10%) Query: 204 PELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKERERE--- 260 P S R S ++ + E +E+ER +E++RE+E +RE+E+E+E+E Sbjct: 238 PHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGK 297 Query: 261 ---REKEREQEKEREREKERERELERQREQ-RAREKELLAAKALEPSFLPVAELHGLRGH 316 R+KERE+++E+++EK+RERE E++ E+ R +EKE K E E+ Sbjct: 298 NKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEI------ 351 Query: 317 ATEERGKPSEQLTPTRA 333 E+R K + TP R+ Sbjct: 352 -DEKRKKDKKSRTPPRS 367 Score = 58.9 bits (141), Expect = 3e-08 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 274 H+ S R +R + RER + R R R++ K+ RE+ KE+E+ KE++RE Sbjct: 222 HNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT-REKIKEKERVKEKDRE 280 Query: 275 KERERELERQRE-QRAREKE 293 KERERE ER++E +R + K+ Sbjct: 281 KEREREKEREKEKERGKNKD 300 Score = 57.0 bits (136), Expect = 1e-07 Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 3/89 (3%) Query: 207 SHSSLAALHSERMSGLSAERLQM-DEELRREREREREREREREADREREKEREREREKER 265 SH+ + +R S + + E R+ R R R++ ++ RE+ KE+ER +EK+R Sbjct: 221 SHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT-REKIKEKERVKEKDR 279 Query: 266 EQEKEREREKERERELERQREQ-RAREKE 293 E+E+ERE+E+E+E+E + +++ + REK+ Sbjct: 280 EKEREREKEREKEKERGKNKDRDKEREKD 308 Score = 53.5 bits (127), Expect = 1e-06 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKERERERE-KEREQEKERER 273 H R S R Q D + ++R + RER R R R++ ++ +E+ +EKER + Sbjct: 217 HRSRSHNRSRSR-QKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVK 275 Query: 274 EKERERELERQREQRAREKE 293 EK+RE+E ER++E R +EKE Sbjct: 276 EKDREKEREREKE-REKEKE 294 Score = 50.1 bits (118), Expect = 1e-05 Identities = 27/89 (30%), Positives = 39/89 (43%) Query: 204 PELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREK 263 PE S+ R S R RR+R + + R R R R+K+R R + Sbjct: 179 PESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSP 238 Query: 264 EREQEKEREREKERERELERQREQRAREK 292 +++ K RER K R R R + + REK Sbjct: 239 HKKRSKSRERRKSRSRSHSRDKRKDTREK 267 Score = 47.0 bits (110), Expect = 1e-04 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 9/85 (10%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE-- 272 HS R S R + R R R+++R R + ++R K RER + + R +++ Sbjct: 207 HSRRKRSQSKHRSRSHN---RSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKD 263 Query: 273 -REK--ERERELERQRE-QRAREKE 293 REK E+ER E+ RE +R REKE Sbjct: 264 TREKIKEKERVKEKDREKEREREKE 288 Score = 38.5 bits (88), Expect = 0.036 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 20/84 (23%) Query: 230 DEELRREREREREREREREADREREKE--------------------REREREKEREQEK 269 ++E +++E+ERE++R +E D +R+K+ RER R + R + Sbjct: 332 EKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSR 391 Query: 270 EREREKERERELERQREQRAREKE 293 K +R+ R R+R K+ Sbjct: 392 SPRTSKTIKRKSSRSPSPRSRNKK 415 Score = 37.7 bits (86), Expect = 0.061 Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 235 REREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKE 293 R RER R R R + R + +R+ R +K+++RE ER RE+E Sbjct: 375 RSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERE 433 Score = 34.7 bits (78), Expect = 0.52 Identities = 17/63 (26%), Positives = 29/63 (46%) Query: 237 REREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLA 296 RER R R R K +R+ + +++K+RE+E + E+R RE+ Sbjct: 379 RERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSM 438 Query: 297 AKA 299 K+ Sbjct: 439 RKS 441 Score = 33.1 bits (74), Expect = 1.5 Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 8/101 (7%) Query: 201 RYPPELSHSSLAALHSER-----MSGLSAERLQMDEELRREREREREREREREADREREK 255 R PP ++S + S R S S+ + + ++R+ R + D++REK Sbjct: 362 RTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREK 421 Query: 256 EREREREKEREQEKEREREKERERELERQREQRA---REKE 293 ER+ E+ + R+ +R+ + + E+ + +EKE Sbjct: 422 ERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKE 462 Score = 32.3 bits (72), Expect = 2.6 Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Query: 210 SLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEK 269 S ++ S R S + R +++++RE+ER+ ER +ERER + Sbjct: 386 SRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISER-RERERSTSMRKSSND 444 Query: 270 EREREKERERELERQREQRAREKELLAAKALEPSFLPVAE 309 +EK + + ++ +E + +K ++ P E Sbjct: 445 RDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTE 484 Score = 31.2 bits (69), Expect = 5.7 Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 10/79 (12%) Query: 226 RLQMDEELRRERERE---REREREREA-------DREREKEREREREKEREQEKEREREK 275 R + ++ +RE+ER+ RERER DR+ +++ E+ +E+E +E + Sbjct: 410 RSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDS 469 Query: 276 ERERELERQREQRAREKEL 294 +E++ + R E ++ Sbjct: 470 SVSKEVDDKDAPRTEENKI 488 >gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens] Length = 520 Score = 77.0 bits (188), Expect = 9e-14 Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 45/240 (18%) Query: 148 PSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSLPP-LHPSAMHLHLSGV--RYPP 204 P++L P PF P + + L + P +P P PG+ PP L P+ H SG R Sbjct: 292 PTHLPPPPFLPPPPTVSTAPPL--IPPPGFP-PPPGAPPPSLIPTIESGHSSGYDSRSAR 348 Query: 205 ELSHSSLAALH----SERMSGLSAERLQMDEELRREREREREREREREADREREKERERE 260 + ++A H + L Q D RRE++R+RER+R+RE DR+R++ERER Sbjct: 349 AFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDRERDRDRDRERERT 408 Query: 261 REKEREQ-----------EKEREREKE------------RERELERQREQRAREKELLAA 297 RE+ERE+ ++ER R +E RE+E ER RE+R REKE Sbjct: 409 RERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE-ERHRERRHREKEETRH 467 Query: 298 KALEPSFLPVAELHGLRGHATEE--RGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVP 355 K+ + + R H +EE + + R+++ K+AG + P P Q P Sbjct: 468 KS--------SRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSE-PAPEQESTEATP 518 >gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens] Length = 594 Score = 77.0 bits (188), Expect = 9e-14 Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 45/240 (18%) Query: 148 PSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSLPP-LHPSAMHLHLSGV--RYPP 204 P++L P PF P + + L + P +P P PG+ PP L P+ H SG R Sbjct: 366 PTHLPPPPFLPPPPTVSTAPPL--IPPPGFP-PPPGAPPPSLIPTIESGHSSGYDSRSAR 422 Query: 205 ELSHSSLAALH----SERMSGLSAERLQMDEELRREREREREREREREADREREKERERE 260 + ++A H + L Q D RRE++R+RER+R+RE DR+R++ERER Sbjct: 423 AFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDRERDRDRDRERERT 482 Query: 261 REKEREQ-----------EKEREREKE------------RERELERQREQRAREKELLAA 297 RE+ERE+ ++ER R +E RE+E ER RE+R REKE Sbjct: 483 RERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE-ERHRERRHREKEETRH 541 Query: 298 KALEPSFLPVAELHGLRGHATEE--RGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVP 355 K+ + + R H +EE + + R+++ K+AG + P P Q P Sbjct: 542 KS--------SRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSE-PAPEQESTEATP 592 >gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] Length = 290 Score = 76.6 bits (187), Expect = 1e-13 Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 9/73 (12%) Query: 230 DEELRREREREREREREREADREREKEREREREKER--------EQEKEREREKEREREL 281 + E ++ RERER+R RERE DR+REKERER+ EK+R E+E++REREK++ERE Sbjct: 126 EREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERET 185 Query: 282 ERQRE-QRAREKE 293 ER R+ QR EKE Sbjct: 186 ERDRDRQRDTEKE 198 Score = 76.3 bits (186), Expect = 2e-13 Identities = 35/62 (56%), Positives = 52/62 (83%), Gaps = 1/62 (1%) Query: 232 ELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRARE 291 E+ R+RERE+++ RERE DR RE+ER+R+REKERE++ E++R+ +RE E ER+R+ R RE Sbjct: 120 EIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERD-RERE 178 Query: 292 KE 293 K+ Sbjct: 179 KQ 180 Score = 74.7 bits (182), Expect = 5e-13 Identities = 57/156 (36%), Positives = 78/156 (50%), Gaps = 40/156 (25%) Query: 178 PIPTPGSLPPLHPSAMHLHLS------GVRYPPELSHSSLAALHSERMSGLSA------- 224 P+ T L P A HLH S V P + S L + S R GL Sbjct: 15 PVKTSPLLVPSLTYAPHLHSSLGTLWVEVTIPLDFSRGRLGSQESPRSWGLGQAHKDADG 74 Query: 225 -----ERLQMDEELRRERERERERERER-------------------EADREREKE--RE 258 ER ++ E+ +ER+R+R+R+RER E DREREK+ RE Sbjct: 75 DDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRE 134 Query: 259 REREKEREQEKEREREKERERELERQRE-QRAREKE 293 RER++ RE+E++R+REKERER+ E+ R+ QR E E Sbjct: 135 RERDRGRERERDRDREKERERQTEKDRDGQRETETE 170 Score = 71.6 bits (174), Expect = 4e-12 Identities = 36/81 (44%), Positives = 58/81 (71%), Gaps = 4/81 (4%) Query: 217 ERMSGLSAERLQMDEELR---REREREREREREREADREREKEREREREKEREQEKERER 273 E+ G ER + E R RE+ERER+ E++R+ RE E ERER+RE+E+++E+E ER Sbjct: 128 EKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETER 187 Query: 274 EKERERELERQRE-QRAREKE 293 +++R+R+ E++RE Q RE++ Sbjct: 188 DRDRQRDTEKERERQTDRERD 208 Score = 71.2 bits (173), Expect = 5e-12 Identities = 37/69 (53%), Positives = 53/69 (76%), Gaps = 3/69 (4%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKER--EREKERERELERQR 285 Q + E RERE+++ RERER+ RERE++R+RE+E+ER+ EK+R +RE E ERE +R+R Sbjct: 118 QTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDRER 177 Query: 286 E-QRAREKE 293 E Q+ RE E Sbjct: 178 EKQKERETE 186 Score = 71.2 bits (173), Expect = 5e-12 Identities = 29/58 (50%), Positives = 50/58 (86%) Query: 236 EREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKE 293 ER+RE +RE ERE DR RE++R+R+R KER++E++R+ E+++ER+ ER++E++ ++KE Sbjct: 216 ERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKE 273 Score = 69.7 bits (169), Expect = 1e-11 Identities = 30/75 (40%), Positives = 54/75 (72%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 287 + E RE ERE +R RER+ DR+R KER+RER+++ E++KER++E+++ER+ +++ E+ Sbjct: 216 ERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEK 275 Query: 288 RAREKELLAAKALEP 302 R +K+ + + P Sbjct: 276 RREDKKRKWGEGISP 290 Score = 69.3 bits (168), Expect = 2e-11 Identities = 31/63 (49%), Positives = 50/63 (79%), Gaps = 1/63 (1%) Query: 232 ELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE-QRAR 290 E ERER+RERE+++E + ER+++R+R+ EKERE++ +RER+++R+ + ERQRE R Sbjct: 166 ETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREG 225 Query: 291 EKE 293 E+E Sbjct: 226 ERE 228 Score = 67.4 bits (163), Expect = 7e-11 Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 7/80 (8%) Query: 217 ERMSGLSAERLQMDEELRRERERERER------EREREADREREKEREREREKEREQEKE 270 ER G ER D E RER+ E++R E ERE DREREK++ERE E++R+++++ Sbjct: 136 ERDRGRERER-DRDREKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRD 194 Query: 271 REREKERERELERQREQRAR 290 E+E+ER+ + ER R+++ + Sbjct: 195 TEKERERQTDRERDRQRKTQ 214 Score = 65.5 bits (158), Expect = 3e-10 Identities = 29/69 (42%), Positives = 51/69 (73%), Gaps = 3/69 (4%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 286 + + E R+R+R+ E+ERER+ DRER+++R+ + E++RE ++E ERE +R RE +R R+ Sbjct: 182 ERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDR 241 Query: 287 --QRAREKE 293 +R RE++ Sbjct: 242 GKERDRERD 250 Score = 65.1 bits (157), Expect = 4e-10 Identities = 27/66 (40%), Positives = 52/66 (78%), Gaps = 1/66 (1%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 287 + D E +++ERE ER+R+R+ D E+E+ER+ +RE++R+++ + ER++E +RE ER+ ++ Sbjct: 172 ERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDR 231 Query: 288 RAREKE 293 R RE++ Sbjct: 232 R-RERQ 236 Score = 64.7 bits (156), Expect = 5e-10 Identities = 28/67 (41%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 287 Q + E R+R+R+R+ E+ERE +RE++R+R+ + ER++E +RE E+E +R ERQR++ Sbjct: 180 QKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDR 239 Query: 288 -RAREKE 293 R +E++ Sbjct: 240 DRGKERD 246 Score = 63.9 bits (154), Expect = 8e-10 Identities = 27/67 (40%), Positives = 52/67 (77%), Gaps = 1/67 (1%) Query: 226 RLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERE-LERQ 284 + Q + + +RE ERE +R RE R+R++ +ER+RE++R++E+++ER+KER++E E++ Sbjct: 212 KTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKK 271 Query: 285 REQRARE 291 +E++ RE Sbjct: 272 KEEKRRE 278 Score = 62.4 bits (150), Expect = 2e-09 Identities = 30/72 (41%), Positives = 52/72 (72%), Gaps = 7/72 (9%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQ------EKEREREKEREREL 281 + + + RE+++ERE ER+R+ R+ EKERER+ ++ER++ E++RE ++E ERE Sbjct: 170 ERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERET 229 Query: 282 ERQRE-QRAREK 292 +R+RE QR R++ Sbjct: 230 DRRRERQRDRDR 241 Score = 50.8 bits (120), Expect = 7e-06 Identities = 21/52 (40%), Positives = 39/52 (75%) Query: 226 RLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKER 277 R + + R +ER+RER+R+ E +ER+KER++ER++++++EK RE +K + Sbjct: 232 RRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRK 283 >gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial [Homo sapiens] Length = 213 Score = 74.3 bits (181), Expect = 6e-13 Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 15/82 (18%) Query: 228 QMDEELRRERERERERE----------REREADREREKEREREREKERE----QEKERER 273 Q D E RER+R+RERE RERE DR+R++E ERER+KERE E +RER Sbjct: 49 QRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRER 108 Query: 274 EKERERELERQRE-QRAREKEL 294 +K++ERE+ER R+ +R ++KE+ Sbjct: 109 QKQKEREMERVRDREREKQKEM 130 Score = 73.2 bits (178), Expect = 1e-12 Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 14/126 (11%) Query: 217 ERMSGLSAERLQMDEELR-REREREREREREREADREREKEREREREKEREQEKEREREK 275 E+ + ER + E R R+RE ERER++ERE DR E +RER+++KERE E+ R+RE+ Sbjct: 65 EKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDRER 124 Query: 276 ERERELERQRE---QRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTR 332 E+++E+ R+R+ + RE+E A + E R TE+R + E+ Sbjct: 125 EKQKEMGRERQTDRETDRERERQAERERETG----------RERKTEDRHRERERERKRE 174 Query: 333 AEKLKD 338 E+ ++ Sbjct: 175 RERKRE 180 Score = 72.8 bits (177), Expect = 2e-12 Identities = 32/71 (45%), Positives = 52/71 (73%) Query: 216 SERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREK 275 ++R + E D R+R+R+RER RER+ DREREK+ +RE E++RE+E++R+R++ Sbjct: 27 TDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDRQR 86 Query: 276 ERERELERQRE 286 E ERE +++RE Sbjct: 87 ETERERDKERE 97 Score = 72.4 bits (176), Expect = 2e-12 Identities = 33/67 (49%), Positives = 51/67 (76%), Gaps = 1/67 (1%) Query: 228 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 286 + D + RER RER+R+RERE +RE ER+RERE++R++++E ERE+++ERE +R E Sbjct: 45 ERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETERERDKERETDRHTET 104 Query: 287 QRAREKE 293 R R+K+ Sbjct: 105 DRERQKQ 111 Score = 71.2 bits (173), Expect = 5e-12 Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 1/77 (1%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 ER ER + E +R ER+R+R+RE +RER+++RERE++ +RE E++RERE++ Sbjct: 22 ERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERERD 81 Query: 277 RERELERQREQRAREKE 293 R+R+ E +RE R +E+E Sbjct: 82 RDRQRETERE-RDKERE 97 Score = 71.2 bits (173), Expect = 5e-12 Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 12/88 (13%) Query: 217 ERMSGLSAERLQMDEELRRERERERERERE-----READREREKEREREREKEREQE-KE 270 E+ + ER Q D E RERER+ ERERE + DR RE+ERER+RE+ER++E KE Sbjct: 125 EKQKEMGRER-QTDRETDRERERQAERERETGRERKTEDRHRERERERKRERERKRETKE 183 Query: 271 RER----EKERERELERQRE-QRAREKE 293 RER E+ER+RE +R+R+ QR E+E Sbjct: 184 RERHTDMERERQRETDRKRDRQRESERE 211 Score = 69.7 bits (169), Expect = 1e-11 Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 7/85 (8%) Query: 217 ERMSGLSAERLQMDEELRRERERERE----REREREADREREKEREREREKEREQEKERE 272 +R E + + +R+RER RE RERE++ DRE E++RERER+++R++E ERE Sbjct: 32 DRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETERE 91 Query: 273 REKERE--RELERQRE-QRAREKEL 294 R+KERE R E RE Q+ +E+E+ Sbjct: 92 RDKERETDRHTETDRERQKQKEREM 116 Score = 68.9 bits (167), Expect = 2e-11 Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 7/73 (9%) Query: 228 QMDEELRRERERERERE----REREADREREKEREREREKEREQEKER---EREKERERE 280 Q + E+ R R+RERE++ RER+ DRE ++ERER+ E+ERE +ER +R +ERERE Sbjct: 111 QKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERERE 170 Query: 281 LERQREQRAREKE 293 +R+RE++ KE Sbjct: 171 RKRERERKRETKE 183 Score = 67.8 bits (164), Expect = 6e-11 Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 14/89 (15%) Query: 218 RMSGLSAERLQMDEELRRERERER-------------EREREREADREREKEREREREKE 264 R + E + E RRE +RER ER+R+R+ +R RE++R+REREK+ Sbjct: 8 RHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQ 67 Query: 265 REQEKEREREKERERELERQREQRAREKE 293 ++E ER+RE+ER+R+ +R+ E R R+KE Sbjct: 68 TDREGERQRERERDRDRQRETE-RERDKE 95 Score = 67.0 bits (162), Expect = 9e-11 Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 5/70 (7%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQE-----KEREREKERERELERQ 284 D E +++E RER+ +RE DRERE++ ERERE RE++ +ERERE++RERE +R+ Sbjct: 121 DREREKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERERERKRERERKRE 180 Query: 285 REQRAREKEL 294 ++R R ++ Sbjct: 181 TKERERHTDM 190 Score = 65.9 bits (159), Expect = 2e-10 Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADRERE-KEREREREKEREQEKEREREK 275 ER ER E +R RERERER+RE +R+RE KERER + ERE+++E +R++ Sbjct: 143 ERERQAERERETGRERKTEDRHRERERERKRERERKRETKERERHTDMERERQRETDRKR 202 Query: 276 ERERELERQRE 286 +R+RE ER+R+ Sbjct: 203 DRQRESERERD 213 Score = 64.3 bits (155), Expect = 6e-10 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 216 SERMSGLSAERLQMDEELRREREREREREREREA-DREREKEREREREKEREQEKERERE 274 +ER ER D RERER+RERER+RE +RER + ERER++E +++++R+RE Sbjct: 148 AERERETGRERKTEDRHRERERERKRERERKRETKERERHTDMERERQRETDRKRDRQRE 207 Query: 275 KERERE 280 ERER+ Sbjct: 208 SERERD 213 Score = 50.1 bits (118), Expect = 1e-05 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 12/79 (15%) Query: 227 LQMDEELRREREREREREREREADREREKERER-----------EREKEREQEKEREREK 275 ++ E R +R+RE RE ++ER+R ER+++R++E+ RER++ Sbjct: 1 MESKTEGRHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDR 60 Query: 276 ERERELERQRE-QRAREKE 293 +RERE + RE +R RE+E Sbjct: 61 DREREKQTDREGERQRERE 79 Score = 48.5 bits (114), Expect = 3e-05 Identities = 23/50 (46%), Positives = 32/50 (64%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKE 264 H ER ER + E RER + ERER+RE DR+R+++RE ERE++ Sbjct: 164 HRERERERKRERERKRETKERERHTDMERERQRETDRKRDRQRESERERD 213 Score = 34.7 bits (78), Expect = 0.52 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 16/116 (13%) Query: 978 QQEPPTARKGPPTQELDRDSE---------EEEEEDDEDGEDEEEVPKRKWQGIEAVFEA 1028 ++E T R+G +E +RD + ++E E D E + E K+K + +E V + Sbjct: 63 EREKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDR 122 Query: 1029 YQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERER 1084 +E +E ERQ + R E + AE+ + E +++ + ERER Sbjct: 123 EREKQKEMGRERQTDRETDRERERQ-------AERERETGRERKTEDRHRERERER 171 Score = 34.3 bits (77), Expect = 0.67 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%) Query: 974 QHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHI 1033 Q ++E R+ E DR+ ++++E + E D E K+K G E + + Sbjct: 85 QRETERERDKERETDRHTETDRERQKQKEREMERVRDRER-EKQKEMGRERQTDRETDRE 143 Query: 1034 EEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAELDHLR 1093 E+ ER+ + R+ E RH ++ E + +++ ERER Q E D R Sbjct: 144 RERQAERERETGRERKTEDRHRERERERKRERERKRETKERERHTDMERER-QRETDRKR 202 >gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens] Length = 588 Score = 74.3 bits (181), Expect = 6e-13 Identities = 77/248 (31%), Positives = 114/248 (45%), Gaps = 52/248 (20%) Query: 148 PSYLAPHPFPHPAFRMDDSYCLSALRSPFYPI--------PTPGSLPP-LHPSAMHLHLS 198 P++L P PF P + + L + P PI P PG+ PP L P+ H S Sbjct: 351 PTHLPPPPFLPPPPTVSTAPPL--IPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSS 408 Query: 199 GV--RYPPELSHSSLAALH----SERMSGLSAERLQMDEELRREREREREREREREADRE 252 G R + ++A H + L Q D RRE++R+RER+R+RE DR+ Sbjct: 409 GYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDRERDRD 468 Query: 253 REKEREREREKEREQ-----------EKEREREKE------------RERELERQREQRA 289 R++ERER RE+ERE+ ++ER R +E RE+E ER RE+R Sbjct: 469 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE-ERHRERRH 527 Query: 290 REKELLAAKALEPSFLPVAELHGLRGHATEE--RGKPSEQLTPTRAEKLKDAGLQAPKPV 347 REKE K+ + + R H +EE + + R+++ K+AG + P P Sbjct: 528 REKEETRHKS--------SRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSE-PAPE 578 Query: 348 QHPLHPVP 355 Q P Sbjct: 579 QESTEATP 586 >gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens] Length = 1341 Score = 72.8 bits (177), Expect = 2e-12 Identities = 36/88 (40%), Positives = 59/88 (67%), Gaps = 5/88 (5%) Query: 206 LSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKER 265 L+ S + +ER AER + E+ R+E+E E ++ERE+EA+RER ++ ERE+ +E Sbjct: 1229 LTDSQIVQKEAER-----AERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREH 1283 Query: 266 EQEKEREREKERERELERQREQRAREKE 293 +E++RERE+ERER+ + R R++E Sbjct: 1284 SRERDRERERERERDRGDRDRDRERDRE 1311 Score = 72.4 bits (176), Expect = 2e-12 Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 1/103 (0%) Query: 213 ALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE 272 A +ER R + +EE ++ERE+E ERER R+ +RE+ +E RER++ERE+E+ER+ Sbjct: 1239 AERAERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERD 1298 Query: 273 R-EKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLR 314 R +++R+RE +R+R + ++ PV + G R Sbjct: 1299 RGDRDRDRERDRERGRERDRRDTKRHSRSRSRSTPVRDRGGRR 1341 Score = 52.4 bits (124), Expect = 2e-06 Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 3/79 (3%) Query: 235 RERERERERE-REREADREREKEREREREKEREQEKERERE--KERERELERQREQRARE 291 R +RE+ER RE+ A+RERE ER ERE ++++ RE + R R +R+R++RA+ Sbjct: 1132 RAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKS 1191 Query: 292 KELLAAKALEPSFLPVAEL 310 KE + K + P A+L Sbjct: 1192 KEKKSEKKEKAQEEPPAKL 1210 Score = 48.9 bits (115), Expect = 3e-05 Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 40/135 (29%) Query: 175 PFYPIPTPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELR 234 P +P P P PP HP R + E+ R Sbjct: 1116 PLHPPPPPPVQPPQHP-----------------------------------RAEQREQER 1140 Query: 235 REREREREREREREADREREKEREREREKEREQEKER-----EREKERERELERQREQRA 289 RE+ ERERE E ERE +R+K RE + R R KER + E++ E++ Sbjct: 1141 AVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKE 1200 Query: 290 REKELLAAKALEPSF 304 + +E AK L+ F Sbjct: 1201 KAQEEPPAKLLDDLF 1215 Score = 43.9 bits (102), Expect = 9e-04 Identities = 55/202 (27%), Positives = 74/202 (36%), Gaps = 53/202 (26%) Query: 224 AERLQMDEELRREREREREREREREADREREKERER-----------------------E 260 A+R EE E E E E + E E D E +K RE E Sbjct: 263 ADRNLKTEEEEEEEEEEEEDDEEEEGDDEGQKSREAPILKEFKEEGEEIPRVKPEEMMDE 322 Query: 261 REKEREQEKE---------REREKERERELERQREQRAREKELLAAKALEPSFLPVAELH 311 R K R QE+E R +E+ R+ L RQ++ EKE+ LE + Sbjct: 323 RPKTRSQEQEVLERGGRFTRSQEEARKSHLARQQQ----EKEMKTTSPLEEEEREIKSSQ 378 Query: 312 GLRGHA--------TEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHTVPS 363 GL+ + TE+R K S P + + + P P+ P PH P Sbjct: 379 GLKEKSKSPSPPRLTEDRKKASLVALPEQTASEE----ETPPPLLTKEASSPPPH---PQ 431 Query: 364 LISNHGIFSLPSSSAATALLIQ 385 L S I P A +LIQ Sbjct: 432 LHSEEEI--EPMEGPAPPVLIQ 451 Score = 39.7 bits (91), Expect = 0.016 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 24/145 (16%) Query: 204 PELSHSSLAALHSERMSG-LSAERLQMDEELRREREREREREREREADR--------ERE 254 PEL S HS R S +S E+ D+E R+ ER R R+ A + E E Sbjct: 194 PELELSR----HSPRKSSSISEEKGDSDDEKPRKGERRSSRVRQARAAKLSEGSQPAEEE 249 Query: 255 KERE-----------REREKEREQEKEREREKERERELERQREQRAREKELLAAKALEPS 303 +++E R + E E+E+E E E++ E E Q++RE +L E Sbjct: 250 EDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDDEEEEGDDEGQKSREAPILKEFKEEGE 309 Query: 304 FLPVAELHGLRGHATEERGKPSEQL 328 +P + + + R + E L Sbjct: 310 EIPRVKPEEMMDERPKTRSQEQEVL 334 Score = 35.4 bits (80), Expect = 0.30 Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 11/135 (8%) Query: 966 SSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEA- 1024 S P + Q+ P + + L + EEEEEE++E+ ++EEE + EA Sbjct: 240 SEGSQPAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDDEEEEGDDEGQKSREAP 299 Query: 1025 VFEAYQEH--------IEEQNLERQVLQTQCRRLEAR--HYSLSLTAEQLSHSVAELRSQ 1074 + + ++E EE ER ++Q + + R ++ S + SH + + + Sbjct: 300 ILKEFKEEGEEIPRVKPEEMMDERPKTRSQEQEVLERGGRFTRSQEEARKSHLARQQQEK 359 Query: 1075 KQKMVSERERLQAEL 1089 + K S E + E+ Sbjct: 360 EMKTTSPLEEEEREI 374 Score = 33.5 bits (75), Expect = 1.2 Identities = 48/217 (22%), Positives = 80/217 (36%), Gaps = 29/217 (13%) Query: 223 SAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELE 282 S E + R+++E+E + E + K + +EK + R E ++ L Sbjct: 343 SQEEARKSHLARQQQEKEMKTTSPLEEEEREIKSSQGLKEKSKSPSPPRLTEDRKKASLV 402 Query: 283 RQREQRAREKE----LLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKD 338 EQ A E+E LL +A P P +LH +EE +P E P Sbjct: 403 ALPEQTASEEETPPPLLTKEASSPP--PHPQLH------SEEEIEPMEGPAP-------- 446 Query: 339 AGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQR 398 PV L P T T L+S H + + S ++ + + + + Sbjct: 447 -------PVLIQLSPPNTDADTRELLVSQHTVQLVGGLSPLSSPSDTKAESPAEKVPEES 499 Query: 399 RLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAE 435 L ++ + S Q+ LE D P+P + E Sbjct: 500 VLPLVQKSTLADYS--AQKDLEPESDRSAQPLPLKIE 534 >gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] Length = 285 Score = 72.0 bits (175), Expect = 3e-12 Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 2/74 (2%) Query: 216 SERMSGLSAERLQMDEELRRERERERERERE-READREREKEREREREKEREQEKERERE 274 +ER ER Q E RR+R+RER+RE+E RE DR+R+KERE++R +ERE ++R++E Sbjct: 169 TERYRDRERER-QKQRETRRDRDRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKE 227 Query: 275 KERERELERQREQR 288 ++RER+ E+ R+++ Sbjct: 228 RDRERQREKDRDRQ 241 Score = 70.1 bits (170), Expect = 1e-11 Identities = 36/102 (35%), Positives = 66/102 (64%), Gaps = 2/102 (1%) Query: 195 LHLSGVRYPPELSHSSLAALHSERMSGLSAER-LQMDEELRREREREREREREREADRER 253 L L G R P + ER + ER + D E+ ++R+R+R+R+RER+ R+R Sbjct: 45 LILRGSRVAPAIIRERERQRERERQRKRAKERHREKDREIEKDRDRQRKRDRERQRWRDR 104 Query: 254 EKEREREREKEREQEKEREREKERERELERQRE-QRAREKEL 294 +++RER +++RE E ER+ E+ER+R+ +R+++ +R R++E+ Sbjct: 105 DRKRERWGDRDRETETERQEERERQRDRKREKDRERQRQREI 146 Score = 64.7 bits (156), Expect = 5e-10 Identities = 32/80 (40%), Positives = 55/80 (68%), Gaps = 11/80 (13%) Query: 225 ERLQMDEELRREREREREREREREADRER----EKERERERE-------KEREQEKERER 273 E + + +RE++RER+R+RE D++R EK+R+RERE ++RE+E++++R Sbjct: 124 EERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRDRERERQKQR 183 Query: 274 EKERERELERQREQRAREKE 293 E R+R+ ERQRE+ RE++ Sbjct: 184 ETRRDRDRERQREKEDRERD 203 Score = 64.7 bits (156), Expect = 5e-10 Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 20/104 (19%) Query: 217 ERMSGLSAERLQMDEELRRERERE-------REREREREADRE--REKEREREREKE--- 264 +R G+ +R +++ E R+RERE R+RERER+ RE R+++RER+REKE Sbjct: 143 QREIGIDKDR-EIETEKDRDREREMGETERYRDRERERQKQRETRRDRDRERQREKEDRE 201 Query: 265 --REQEKEREREKERERELERQRE-----QRAREKELLAAKALE 301 R+++KERE+++ RERE R R+ +R REK+ KA++ Sbjct: 202 RDRDRQKEREKDRYRERETGRDRDKERDRERQREKDRDRQKAID 245 Score = 62.4 bits (150), Expect = 2e-09 Identities = 28/65 (43%), Positives = 50/65 (76%), Gaps = 1/65 (1%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 289 D + +RER +R+RE E E ERE++R+R+REK+RE++++RE +++RE+E +++ R Sbjct: 103 DRDRKRERWGDRDRETETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKD-RD 161 Query: 290 REKEL 294 RE+E+ Sbjct: 162 REREM 166 Score = 62.4 bits (150), Expect = 2e-09 Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 20/84 (23%) Query: 230 DEELRREREREREREREREADREREKERERE----REKEREQEKEREREKE--------- 276 D E ER+ ERER+R+R+ +++RE++R+RE +++E E EK+R+RE+E Sbjct: 115 DRETETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRD 174 Query: 277 RERELERQRE-------QRAREKE 293 RERE ++QRE +R REKE Sbjct: 175 RERERQKQRETRRDRDRERQREKE 198 Score = 60.5 bits (145), Expect = 9e-09 Identities = 27/64 (42%), Positives = 45/64 (70%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 289 D + E ER+ ERER+R+ RE+++ER+R+RE ++++E E EK+R+RE E +R Sbjct: 113 DRDRETETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERY 172 Query: 290 REKE 293 R++E Sbjct: 173 RDRE 176 >gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] Length = 1012 Score = 71.6 bits (174), Expect = 4e-12 Identities = 116/472 (24%), Positives = 168/472 (35%), Gaps = 85/472 (18%) Query: 69 PSHLLSTPYPFGLSPSS---VVQDSRFPPLNLQRP---VHHVVP-PSTVTEDYLRSFRPY 121 P L+ P SP+ + Q PP P +H V P P ++ P Sbjct: 433 PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPP 492 Query: 122 HTTDDLRMSSLPPLG-----LDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPF 176 T +S PP G P + AA S P P ++ + L P Sbjct: 493 ITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEE-ALDDAEEPE 551 Query: 177 YPIPTPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRE 236 P P P S P P+ V P S S+ H +R A L Sbjct: 552 SPPPPPRSPSP-EPTV-------VDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGS 603 Query: 237 REREREREREREADREREKEREREREKEREQEKEREREKERERELER-------QREQRA 289 + ++ E +A RE E++ ERE+E+E+EKERERE+ERERE ER E R Sbjct: 604 KLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRL 663 Query: 290 REKELLAAKALEPSFLP----VAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPK 345 + +L + PSF P +A + G T SE P + +P Sbjct: 664 SDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARP---------HVMSPT 714 Query: 346 PVQHPLHPVPTPHHTVPSLISNH--GIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQE 403 HP + P + L++ H G++++ + R+R LR Sbjct: 715 NRNHPFY---MPLNPTDPLLAYHMPGLYNVDPT------------------IRERELR-- 751 Query: 404 KEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGP 463 +R+ + E R++ L + + G P E + P N P +HF Sbjct: 752 --EREIREREIRERELRERMKPGFEVKPPELD-----PLHPAAN--------PMEHFARH 796 Query: 464 PPLISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAA 515 L P P P A ++P N LE R P P R AA Sbjct: 797 SALTIP-PTAGPHPFASFHPGL---NPLERERLALAGPQLRPEMSYPDRLAA 844 Score = 43.5 bits (101), Expect = 0.001 Identities = 95/421 (22%), Positives = 134/421 (31%), Gaps = 85/421 (20%) Query: 343 APKPVQHPLHPV--PTPHHTVPSLISNHG----IFSLPSSSAATALLIQRTNEEEKWLAR 396 AP Q PLH P PH + H F LP ++ + T+ + Sbjct: 284 APSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG-TSPAAAYPHT 342 Query: 397 QRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDP 456 +L + QSQ Q EQ L PP P H T P P P Sbjct: 343 SLQLPASQSALQSQ-----QPPREQPL----PPAPLAMPHIKPPPTTPIPQLPAPQAHKH 393 Query: 457 PQHFGGPPPL-----ISPKPQL--------HAAPTALWNPVSLMDNTLETRRAESHSLHS 503 P H GP P + P P L H P+A P+ LM +S L S Sbjct: 394 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM--------PQSQPLPS 445 Query: 504 HPA---AFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEH 560 PA S+ P + A + P + P PPP P S Sbjct: 446 SPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQH--PFVPGGPPPITPPTCPSTST 503 Query: 561 QPFLPGPG--PFLAELEKSTQTILGQQRASLPQAATFGE-LSGPLKPGSPYRPPVPRAPD 617 P PG P + S +I G LP E L +P SP PP PR+P Sbjct: 504 PPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESP--PPPPRSPS 561 Query: 618 PAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQ 677 P + + + +Q +Y LD Y+ + Sbjct: 562 P----------------EPTVVDTPSHASQSARFYKHLDRGYNSCARTD----------- 594 Query: 678 PPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPSP 737 L F+ L G +++EE + + +R+ + RE + +R+ Sbjct: 595 -----------LYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERE 643 Query: 738 R 738 R Sbjct: 644 R 644 >gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] Length = 1566 Score = 71.6 bits (174), Expect = 4e-12 Identities = 116/472 (24%), Positives = 168/472 (35%), Gaps = 85/472 (18%) Query: 69 PSHLLSTPYPFGLSPSS---VVQDSRFPPLNLQRP---VHHVVP-PSTVTEDYLRSFRPY 121 P L+ P SP+ + Q PP P +H V P P ++ P Sbjct: 987 PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPP 1046 Query: 122 HTTDDLRMSSLPPLG-----LDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPF 176 T +S PP G P + AA S P P ++ + L P Sbjct: 1047 ITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEE-ALDDAEEPE 1105 Query: 177 YPIPTPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRE 236 P P P S P P+ V P S S+ H +R A L Sbjct: 1106 SPPPPPRSPSP-EPTV-------VDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGS 1157 Query: 237 REREREREREREADREREKEREREREKEREQEKEREREKERERELER-------QREQRA 289 + ++ E +A RE E++ ERE+E+E+EKERERE+ERERE ER E R Sbjct: 1158 KLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRL 1217 Query: 290 REKELLAAKALEPSFLP----VAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPK 345 + +L + PSF P +A + G T SE P + +P Sbjct: 1218 SDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARP---------HVMSPT 1268 Query: 346 PVQHPLHPVPTPHHTVPSLISNH--GIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQE 403 HP + P + L++ H G++++ + R+R LR Sbjct: 1269 NRNHPFY---MPLNPTDPLLAYHMPGLYNVDPT------------------IRERELR-- 1305 Query: 404 KEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGP 463 +R+ + E R++ L + + G P E + P N P +HF Sbjct: 1306 --EREIREREIRERELRERMKPGFEVKPPELD-----PLHPAAN--------PMEHFARH 1350 Query: 464 PPLISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAA 515 L P P P A ++P N LE R P P R AA Sbjct: 1351 SALTIP-PTAGPHPFASFHPGL---NPLERERLALAGPQLRPEMSYPDRLAA 1398 Score = 43.5 bits (101), Expect = 0.001 Identities = 95/421 (22%), Positives = 134/421 (31%), Gaps = 85/421 (20%) Query: 343 APKPVQHPLHPV--PTPHHTVPSLISNHG----IFSLPSSSAATALLIQRTNEEEKWLAR 396 AP Q PLH P PH + H F LP ++ + T+ + Sbjct: 838 APSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG-TSPAAAYPHT 896 Query: 397 QRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDP 456 +L + QSQ Q EQ L PP P H T P P P Sbjct: 897 SLQLPASQSALQSQ-----QPPREQPL----PPAPLAMPHIKPPPTTPIPQLPAPQAHKH 947 Query: 457 PQHFGGPPPL-----ISPKPQL--------HAAPTALWNPVSLMDNTLETRRAESHSLHS 503 P H GP P + P P L H P+A P+ LM +S L S Sbjct: 948 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM--------PQSQPLPS 999 Query: 504 HPA---AFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEH 560 PA S+ P + A + P + P PPP P S Sbjct: 1000 SPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQH--PFVPGGPPPITPPTCPSTST 1057 Query: 561 QPFLPGPG--PFLAELEKSTQTILGQQRASLPQAATFGE-LSGPLKPGSPYRPPVPRAPD 617 P PG P + S +I G LP E L +P SP PP PR+P Sbjct: 1058 PPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESP--PPPPRSPS 1115 Query: 618 PAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQ 677 P + + + +Q +Y LD Y+ + Sbjct: 1116 P----------------EPTVVDTPSHASQSARFYKHLDRGYNSCARTD----------- 1148 Query: 678 PPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPSP 737 L F+ L G +++EE + + +R+ + RE + +R+ Sbjct: 1149 -----------LYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERE 1197 Query: 738 R 738 R Sbjct: 1198 R 1198 Score = 38.5 bits (88), Expect = 0.036 Identities = 15/37 (40%), Positives = 31/37 (83%), Gaps = 1/37 (2%) Query: 249 ADREREKEREREREKEREQEKEREREKERERELERQR 285 AD++++K++E++R+++R++E+E+ R+K RE E R R Sbjct: 3 ADKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38 Score = 37.7 bits (86), Expect = 0.061 Identities = 14/36 (38%), Positives = 29/36 (80%), Gaps = 1/36 (2%) Query: 238 EREREREREREADREREKEREREREKEREQEKERER 273 ++++++++E++ DR+R++ERE+ R+K RE E R R Sbjct: 4 DKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38 Score = 37.4 bits (85), Expect = 0.080 Identities = 14/37 (37%), Positives = 31/37 (83%), Gaps = 1/37 (2%) Query: 254 EKEREREREKEREQEKEREREK-ERERELERQREQRA 289 +K++++++EK+R+++++REREK ++ RE E R +R+ Sbjct: 4 DKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRS 40 Score = 35.8 bits (81), Expect = 0.23 Identities = 13/36 (36%), Positives = 29/36 (80%), Gaps = 1/36 (2%) Query: 244 EREREADREREKEREREREKEREQEKEREREKERER 279 +++++ D+E++++R+R+RE+E+ ++K RE E R R Sbjct: 4 DKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38 Score = 34.7 bits (78), Expect = 0.52 Identities = 10/30 (33%), Positives = 26/30 (86%) Query: 264 EREQEKEREREKERERELERQREQRAREKE 293 +++++K++E++++R+R+ ER++ +ARE E Sbjct: 4 DKDKDKDKEKDRDRDRDREREKRDKARESE 33 Score = 34.3 bits (77), Expect = 0.67 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 14/78 (17%) Query: 230 DEELRRERERERERERERE-ADREREKERERER-------------EKEREQEKEREREK 275 D++ +E++R+R+R+RERE D+ RE E R R E + ++++ + Sbjct: 6 DKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDEDNDNNS 65 Query: 276 ERERELERQREQRAREKE 293 E ++ +++ +K+ Sbjct: 66 ATAEESTKKNKKKPPKKK 83 >gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] Length = 1566 Score = 71.6 bits (174), Expect = 4e-12 Identities = 116/472 (24%), Positives = 168/472 (35%), Gaps = 85/472 (18%) Query: 69 PSHLLSTPYPFGLSPSS---VVQDSRFPPLNLQRP---VHHVVP-PSTVTEDYLRSFRPY 121 P L+ P SP+ + Q PP P +H V P P ++ P Sbjct: 987 PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPP 1046 Query: 122 HTTDDLRMSSLPPLG-----LDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPF 176 T +S PP G P + AA S P P ++ + L P Sbjct: 1047 ITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEE-ALDDAEEPE 1105 Query: 177 YPIPTPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRE 236 P P P S P P+ V P S S+ H +R A L Sbjct: 1106 SPPPPPRSPSP-EPTV-------VDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGS 1157 Query: 237 REREREREREREADREREKEREREREKEREQEKEREREKERERELER-------QREQRA 289 + ++ E +A RE E++ ERE+E+E+EKERERE+ERERE ER E R Sbjct: 1158 KLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRL 1217 Query: 290 REKELLAAKALEPSFLP----VAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPK 345 + +L + PSF P +A + G T SE P + +P Sbjct: 1218 SDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARP---------HVMSPT 1268 Query: 346 PVQHPLHPVPTPHHTVPSLISNH--GIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQE 403 HP + P + L++ H G++++ + R+R LR Sbjct: 1269 NRNHPFY---MPLNPTDPLLAYHMPGLYNVDPT------------------IRERELR-- 1305 Query: 404 KEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGP 463 +R+ + E R++ L + + G P E + P N P +HF Sbjct: 1306 --EREIREREIRERELRERMKPGFEVKPPELD-----PLHPAAN--------PMEHFARH 1350 Query: 464 PPLISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAA 515 L P P P A ++P N LE R P P R AA Sbjct: 1351 SALTIP-PTAGPHPFASFHPGL---NPLERERLALAGPQLRPEMSYPDRLAA 1398 Score = 43.5 bits (101), Expect = 0.001 Identities = 95/421 (22%), Positives = 134/421 (31%), Gaps = 85/421 (20%) Query: 343 APKPVQHPLHPV--PTPHHTVPSLISNHG----IFSLPSSSAATALLIQRTNEEEKWLAR 396 AP Q PLH P PH + H F LP ++ + T+ + Sbjct: 838 APSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG-TSPAAAYPHT 896 Query: 397 QRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDP 456 +L + QSQ Q EQ L PP P H T P P P Sbjct: 897 SLQLPASQSALQSQ-----QPPREQPL----PPAPLAMPHIKPPPTTPIPQLPAPQAHKH 947 Query: 457 PQHFGGPPPL-----ISPKPQL--------HAAPTALWNPVSLMDNTLETRRAESHSLHS 503 P H GP P + P P L H P+A P+ LM +S L S Sbjct: 948 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM--------PQSQPLPS 999 Query: 504 HPA---AFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEH 560 PA S+ P + A + P + P PPP P S Sbjct: 1000 SPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQH--PFVPGGPPPITPPTCPSTST 1057 Query: 561 QPFLPGPG--PFLAELEKSTQTILGQQRASLPQAATFGE-LSGPLKPGSPYRPPVPRAPD 617 P PG P + S +I G LP E L +P SP PP PR+P Sbjct: 1058 PPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESP--PPPPRSPS 1115 Query: 618 PAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQ 677 P + + + +Q +Y LD Y+ + Sbjct: 1116 P----------------EPTVVDTPSHASQSARFYKHLDRGYNSCARTD----------- 1148 Query: 678 PPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPSP 737 L F+ L G +++EE + + +R+ + RE + +R+ Sbjct: 1149 -----------LYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERE 1197 Query: 738 R 738 R Sbjct: 1198 R 1198 Score = 38.5 bits (88), Expect = 0.036 Identities = 15/37 (40%), Positives = 31/37 (83%), Gaps = 1/37 (2%) Query: 249 ADREREKEREREREKEREQEKEREREKERERELERQR 285 AD++++K++E++R+++R++E+E+ R+K RE E R R Sbjct: 3 ADKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38 Score = 37.7 bits (86), Expect = 0.061 Identities = 14/36 (38%), Positives = 29/36 (80%), Gaps = 1/36 (2%) Query: 238 EREREREREREADREREKEREREREKEREQEKERER 273 ++++++++E++ DR+R++ERE+ R+K RE E R R Sbjct: 4 DKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38 Score = 37.4 bits (85), Expect = 0.080 Identities = 14/37 (37%), Positives = 31/37 (83%), Gaps = 1/37 (2%) Query: 254 EKEREREREKEREQEKEREREK-ERERELERQREQRA 289 +K++++++EK+R+++++REREK ++ RE E R +R+ Sbjct: 4 DKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRS 40 Score = 35.8 bits (81), Expect = 0.23 Identities = 13/36 (36%), Positives = 29/36 (80%), Gaps = 1/36 (2%) Query: 244 EREREADREREKEREREREKEREQEKEREREKERER 279 +++++ D+E++++R+R+RE+E+ ++K RE E R R Sbjct: 4 DKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38 Score = 34.7 bits (78), Expect = 0.52 Identities = 10/30 (33%), Positives = 26/30 (86%) Query: 264 EREQEKEREREKERERELERQREQRAREKE 293 +++++K++E++++R+R+ ER++ +ARE E Sbjct: 4 DKDKDKDKEKDRDRDRDREREKRDKARESE 33 Score = 34.3 bits (77), Expect = 0.67 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 14/78 (17%) Query: 230 DEELRRERERERERERERE-ADREREKERERER-------------EKEREQEKEREREK 275 D++ +E++R+R+R+RERE D+ RE E R R E + ++++ + Sbjct: 6 DKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDEDNDNNS 65 Query: 276 ERERELERQREQRAREKE 293 E ++ +++ +K+ Sbjct: 66 ATAEESTKKNKKKPPKKK 83 >gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo sapiens] Length = 142 Score = 71.2 bits (173), Expect = 5e-12 Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 16/101 (15%) Query: 203 PPELSHSSLAALHSERMSGLSAERLQMDEELRRERER--EREREREREADREREKERERE 260 PP L HS M+G SA + Q EE RRE +R E+ RE +R + REKE E+E Sbjct: 50 PPTLRHS---------MAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKE 100 Query: 261 REKEREQEKEREREKERERELE-----RQREQRAREKELLA 296 E+E E+E+E E E+E E E+ R+RE EK L++ Sbjct: 101 EEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLIS 141 Score = 46.6 bits (109), Expect = 1e-04 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 3/80 (3%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE---R 273 E ++GL+ + EE R + RE ++ E+ RE++R +EK RE R Sbjct: 34 ENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRR 93 Query: 274 EKERERELERQREQRAREKE 293 EKE E+E E + E+ E+E Sbjct: 94 EKEEEKEEEEEEEEEEEEEE 113 Score = 32.0 bits (71), Expect = 3.3 Identities = 13/30 (43%), Positives = 22/30 (73%) Query: 985 RKGPPTQELDRDSEEEEEEDDEDGEDEEEV 1014 R+ ++ + + EEEEEE++E+ E+EEEV Sbjct: 92 RREKEEEKEEEEEEEEEEEEEEEEEEEEEV 121 Score = 31.6 bits (70), Expect = 4.4 Identities = 13/29 (44%), Positives = 21/29 (72%) Query: 985 RKGPPTQELDRDSEEEEEEDDEDGEDEEE 1013 R+ +E + + EEEEEE++E+ E+EEE Sbjct: 87 RREGKRREKEEEKEEEEEEEEEEEEEEEE 115 Score = 31.6 bits (70), Expect = 4.4 Identities = 13/29 (44%), Positives = 21/29 (72%) Query: 985 RKGPPTQELDRDSEEEEEEDDEDGEDEEE 1013 R+G ++ + EEEEEE++E+ E+EEE Sbjct: 88 REGKRREKEEEKEEEEEEEEEEEEEEEEE 116 Score = 30.8 bits (68), Expect = 7.5 Identities = 16/59 (27%), Positives = 32/59 (54%) Query: 985 RKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQVL 1043 R+ +E R +EEE+E++E+ E+EEE + + + E F E + E++++ Sbjct: 82 RREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLI 140 >gi|125988409 RED protein [Homo sapiens] Length = 557 Score = 70.9 bits (172), Expect = 7e-12 Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 2/63 (3%) Query: 223 SAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELE 282 S + D+E RER RERER+RER+ DR+RE+ERER+RE+ERE+++ERE EK+R E Sbjct: 328 STTKTPRDKE--RERYRERERDRERDRDRDRERERERDRERERERDREREEEKKRHSYFE 385 Query: 283 RQR 285 + + Sbjct: 386 KPK 388 Score = 63.9 bits (154), Expect = 8e-10 Identities = 25/49 (51%), Positives = 44/49 (89%) Query: 241 REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 289 R++ERER +RER++ER+R+R++ERE+E++RERE+ER+RE E ++++ + Sbjct: 334 RDKERERYRERERDRERDRDRDRERERERDRERERERDREREEEKKRHS 382 Score = 61.2 bits (147), Expect = 5e-09 Identities = 24/46 (52%), Positives = 41/46 (89%) Query: 245 REREADREREKEREREREKEREQEKEREREKERERELERQREQRAR 290 R++E +R RE+ER+RER+++R++E+ERER++ERERE +R+RE+ + Sbjct: 334 RDKERERYRERERDRERDRDRDRERERERDRERERERDREREEEKK 379 Score = 60.1 bits (144), Expect = 1e-08 Identities = 25/46 (54%), Positives = 39/46 (84%) Query: 247 READREREKEREREREKEREQEKEREREKERERELERQREQRAREK 292 R+ +RER +ERER+RE++R++++ERERE++RERE ER RE+ +K Sbjct: 334 RDKERERYRERERDRERDRDRDRERERERDRERERERDREREEEKK 379 Score = 60.1 bits (144), Expect = 1e-08 Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 8/98 (8%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 289 + E RER+R+R+RERERE DRERE+ER+RERE+E+++ E+ K + ++ + Sbjct: 343 ERERDRERDRDRDRERERERDRERERERDREREEEKKRHSYFEKPKVDDEPMDVDKGP-G 401 Query: 290 REKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQ 327 KEL+ K++ F A G TE KP ++ Sbjct: 402 STKELI--KSINEKFAGSAGWEG-----TESLKKPEDK 432 Score = 58.5 bits (140), Expect = 3e-08 Identities = 26/44 (59%), Positives = 40/44 (90%), Gaps = 1/44 (2%) Query: 250 DREREKEREREREKEREQEKEREREKERERELERQREQRAREKE 293 D+ERE+ RERER++ER+++++RERE+ER+RE ER+R+ R RE+E Sbjct: 335 DKERERYRERERDRERDRDRDRERERERDRERERERD-REREEE 377 Score = 35.4 bits (80), Expect = 0.30 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 239 REREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREK 292 + R E RE + E E R R+K+ K R++E EREREL + RA+E+ Sbjct: 54 KSRHHEMPREYN-EDEDPAARRRKKKSYYAKLRQQEIERERELAEKYRDRAKER 106 Score = 32.7 bits (73), Expect = 2.0 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Query: 235 RERERERE-REREREADREREKEREREREKEREQEKERE-REKERERELERQR--EQRAR 290 R E RE E E A R R+K+ + +++E E+ERE EK R+R ER+ + Sbjct: 56 RHHEMPREYNEDEDPAARRRKKKSYYAKLRQQEIERERELAEKYRDRAKERRDGVNKDYE 115 Query: 291 EKELLAAKALEPSFLPVAE 309 E EL++ A + P AE Sbjct: 116 ETELISTTANYRAVGPTAE 134 >gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] Length = 1220 Score = 70.1 bits (170), Expect = 1e-11 Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 4/95 (4%) Query: 205 ELSHSSLAALHSERMSGLSAERLQMDEELRRERER-EREREREREADREREKEREREREK 263 EL A L +R +L+ E+ R+ERER E+ER+R+ E +++ EK+RE ER++ Sbjct: 364 ELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQR 423 Query: 264 EREQEKEREREKERERELERQRE---QRAREKELL 295 E E+ KE ER + +RELERQR+ +R R +ELL Sbjct: 424 EEERRKEIERREAAKRELERQRQLEWERNRRQELL 458 Score = 56.6 bits (135), Expect = 1e-07 Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 10/119 (8%) Query: 225 ERLQMDEELRRERERERER-EREREADREREKEREREREKEREQEKER----EREKERER 279 ER ++ E RR+ E++R E+ER A ER ++ +ERE++ EQE++R E++ E++R Sbjct: 359 ERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQ-EQERKRQLELEKQLEKQR 417 Query: 280 ELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATE---ERGKPSEQLTPTRAEK 335 ELERQRE+ R KE+ +A + +L R E +R K E + +A+K Sbjct: 418 ELERQREEE-RRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKK 475 Score = 54.7 bits (130), Expect = 5e-07 Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 11/131 (8%) Query: 211 LAALHSERMSGLSAERLQMDE----ELRREREREREREREREADREREKEREREREKERE 266 LA L ER + + EL ++ E++RE ER+RE +R +E ER ++E E Sbjct: 383 LAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELE 442 Query: 267 QEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSE 326 ++++ E E+ R +EL QR + + +L AK F EL L + GK + Sbjct: 443 RQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEF----ELEALNDKKHQLEGKLQD 498 Query: 327 ---QLTPTRAE 334 +LT R E Sbjct: 499 IRCRLTTQRQE 509 Score = 44.3 bits (103), Expect = 7e-04 Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 ++ + AERL+ E+ R+ E E+++E EA R R +ER+++ + +QE E +R ++ Sbjct: 620 QKQKSMEAERLKQKEQERKIIELEKQKE---EAQR-RAQERDKQWLEHVQQEDEHQRPRK 675 Query: 277 RERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEK 335 E + +RE+ ++K+ E + G H +E KP+ Q + AEK Sbjct: 676 LHEEEKLKREESVKKKD-----GEEKGKQEAQDKLGRLFHQHQEPAKPAVQAPWSTAEK 729 Score = 42.0 bits (97), Expect = 0.003 Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 30/166 (18%) Query: 192 AMHL---HLSGVRYPPEL-------------SHSSLAALHSERMSG-LSAERLQMDEELR 234 AMHL +SG PP L S S ++ + S + L E + DE+ + Sbjct: 282 AMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQ 341 Query: 235 RERE-----REREREREREADREREKEREREREKER-EQEKEREREKERERELERQREQR 288 E++ +++RE + E EK R+ E++R EQE+ + E+ + ER+R+++ Sbjct: 342 LEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQ 401 Query: 289 AREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAE 334 R+++L K LE + L EER K E+ + E Sbjct: 402 ERKRQLELEKQLE-------KQRELERQREEERRKEIERREAAKRE 440 Score = 33.9 bits (76), Expect = 0.88 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%) Query: 381 ALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQV-LEQHLDMGRPPVPAEAEHRPE 439 ALL Q+ E+E+ LA+ R QE+++R+ Q E ++Q+ LE+ L+ R E E + E Sbjct: 371 ALLEQQRKEQER-LAQLERAEQERKERERQEQERKRQLELEKQLEKQR-----ELERQRE 424 Query: 440 STTRPGPNRHEPGGRD 455 R R E R+ Sbjct: 425 EERRKEIERREAAKRE 440 Score = 33.5 bits (75), Expect = 1.2 Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 11/116 (9%) Query: 991 QELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQ---VLQTQC 1047 +EL+R EEE ++ E E + +R+ Q +E QE + ++N E++ VL+ + Sbjct: 417 RELERQREEERRKEIERREAAKRELERQRQ-LEWERNRRQELLNQRNKEQEDIVVLKAKK 475 Query: 1048 RRLEARHYSLSLTAEQLSHSVAELR----SQKQKMVS---ERERLQAELDHLRKCL 1096 + LE +L+ QL + ++R +Q+Q++ S RE AE+ HL++ L Sbjct: 476 KTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQL 531 Score = 33.1 bits (74), Expect = 1.5 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 24/123 (19%) Query: 226 RLQMDEELRRERERERERE---------REREADREREKEREREREKEREQEKER---ER 273 R Q+DE + R + +E + RE ++ +K++ E E+ +++E+ER E Sbjct: 583 RDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIEL 642 Query: 274 EKERERELERQREQRAREKELLAAKALEPSFLPVAELH---------GLRGHATEERGKP 324 EK++E E QR + R+K+ L E +LH ++ EE+GK Sbjct: 643 EKQKE---EAQRRAQERDKQWLEHVQQEDEHQRPRKLHEEEKLKREESVKKKDGEEKGKQ 699 Query: 325 SEQ 327 Q Sbjct: 700 EAQ 702 >gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] Length = 1721 Score = 70.1 bits (170), Expect = 1e-11 Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 4/95 (4%) Query: 205 ELSHSSLAALHSERMSGLSAERLQMDEELRRERER-EREREREREADREREKEREREREK 263 EL A L +R +L+ E+ R+ERER E+ER+R+ E +++ EK+RE ER++ Sbjct: 364 ELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQR 423 Query: 264 EREQEKEREREKERERELERQRE---QRAREKELL 295 E E+ KE ER + +RELERQR+ +R R +ELL Sbjct: 424 EEERRKEIERREAAKRELERQRQLEWERNRRQELL 458 Score = 56.6 bits (135), Expect = 1e-07 Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 10/119 (8%) Query: 225 ERLQMDEELRRERERERER-EREREADREREKEREREREKEREQEKER----EREKERER 279 ER ++ E RR+ E++R E+ER A ER ++ +ERE++ EQE++R E++ E++R Sbjct: 359 ERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQ-EQERKRQLELEKQLEKQR 417 Query: 280 ELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATE---ERGKPSEQLTPTRAEK 335 ELERQRE+ R KE+ +A + +L R E +R K E + +A+K Sbjct: 418 ELERQREEE-RRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKK 475 Score = 54.7 bits (130), Expect = 5e-07 Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 11/131 (8%) Query: 211 LAALHSERMSGLSAERLQMDE----ELRREREREREREREREADREREKEREREREKERE 266 LA L ER + + EL ++ E++RE ER+RE +R +E ER ++E E Sbjct: 383 LAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELE 442 Query: 267 QEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSE 326 ++++ E E+ R +EL QR + + +L AK F EL L + GK + Sbjct: 443 RQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEF----ELEALNDKKHQLEGKLQD 498 Query: 327 ---QLTPTRAE 334 +LT R E Sbjct: 499 IRCRLTTQRQE 509 Score = 44.3 bits (103), Expect = 7e-04 Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 ++ + AERL+ E+ R+ E E+++E EA R R +ER+++ + +QE E +R ++ Sbjct: 620 QKQKSMEAERLKQKEQERKIIELEKQKE---EAQR-RAQERDKQWLEHVQQEDEHQRPRK 675 Query: 277 RERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEK 335 E + +RE+ ++K+ E + G H +E KP+ Q + AEK Sbjct: 676 LHEEEKLKREESVKKKD-----GEEKGKQEAQDKLGRLFHQHQEPAKPAVQAPWSTAEK 729 Score = 42.0 bits (97), Expect = 0.003 Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 30/166 (18%) Query: 192 AMHL---HLSGVRYPPEL-------------SHSSLAALHSERMSG-LSAERLQMDEELR 234 AMHL +SG PP L S S ++ + S + L E + DE+ + Sbjct: 282 AMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQ 341 Query: 235 RERE-----REREREREREADREREKEREREREKER-EQEKEREREKERERELERQREQR 288 E++ +++RE + E EK R+ E++R EQE+ + E+ + ER+R+++ Sbjct: 342 LEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQ 401 Query: 289 AREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAE 334 R+++L K LE + L EER K E+ + E Sbjct: 402 ERKRQLELEKQLE-------KQRELERQREEERRKEIERREAAKRE 440 Score = 33.9 bits (76), Expect = 0.88 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%) Query: 381 ALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQV-LEQHLDMGRPPVPAEAEHRPE 439 ALL Q+ E+E+ LA+ R QE+++R+ Q E ++Q+ LE+ L+ R E E + E Sbjct: 371 ALLEQQRKEQER-LAQLERAEQERKERERQEQERKRQLELEKQLEKQR-----ELERQRE 424 Query: 440 STTRPGPNRHEPGGRD 455 R R E R+ Sbjct: 425 EERRKEIERREAAKRE 440 Score = 33.5 bits (75), Expect = 1.2 Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 11/116 (9%) Query: 991 QELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQ---VLQTQC 1047 +EL+R EEE ++ E E + +R+ Q +E QE + ++N E++ VL+ + Sbjct: 417 RELERQREEERRKEIERREAAKRELERQRQ-LEWERNRRQELLNQRNKEQEDIVVLKAKK 475 Query: 1048 RRLEARHYSLSLTAEQLSHSVAELR----SQKQKMVS---ERERLQAELDHLRKCL 1096 + LE +L+ QL + ++R +Q+Q++ S RE AE+ HL++ L Sbjct: 476 KTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQL 531 Score = 33.1 bits (74), Expect = 1.5 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 24/123 (19%) Query: 226 RLQMDEELRRERERERERE---------REREADREREKEREREREKEREQEKER---ER 273 R Q+DE + R + +E + RE ++ +K++ E E+ +++E+ER E Sbjct: 583 RDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIEL 642 Query: 274 EKERERELERQREQRAREKELLAAKALEPSFLPVAELH---------GLRGHATEERGKP 324 EK++E E QR + R+K+ L E +LH ++ EE+GK Sbjct: 643 EKQKE---EAQRRAQERDKQWLEHVQQEDEHQRPRKLHEEEKLKREESVKKKDGEEKGKQ 699 Query: 325 SEQ 327 Q Sbjct: 700 EAQ 702 >gi|34878777 ring finger protein 20 [Homo sapiens] Length = 975 Score = 70.1 bits (170), Expect = 1e-11 Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 1/100 (1%) Query: 203 PPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERER-EREREADREREKERERER 261 P EL S S S E + R E ERERER E+ERE +REREKE+ERER Sbjct: 533 PAELKPDSEDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKERER 592 Query: 262 EKEREQEKEREREKERERELERQREQRAREKELLAAKALE 301 EK++ +E E+ER+ +++E + + R +E E++ +E Sbjct: 593 EKQKLKESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIE 632 Score = 55.8 bits (133), Expect = 2e-07 Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 30/149 (20%) Query: 207 SHSSLAALHSERMSGLSAERLQMDEEL-RREREREREREREREADREREKEREREREKER 265 S SS + E + + ++R + + E RRE+ERERERERE+E +REREK++ +E EKER Sbjct: 545 SQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEKER 604 Query: 266 EQEKER---------------------------EREKERERELERQREQRAREKELLAAK 298 + K++ E +KE + L+ R +++ + Sbjct: 605 DSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLM 664 Query: 299 ALEPSFLPVAELHGLRGHATEERGKPSEQ 327 A E AEL LR + K ++ Sbjct: 665 AAEKK--SKAELEDLRQRLKDLEDKEKKE 691 Score = 33.9 bits (76), Expect = 0.88 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Query: 200 VRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERERE---READREREKE 256 +RY +L + + SG + + Q E ++ E + + E ++ + + Sbjct: 495 LRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASKASQ 554 Query: 257 REREREKEREQEKEREREKERERELERQREQRAREKE 293 + K + E+ERERE+ RE ER+RE R REKE Sbjct: 555 EDANEIKSKRDEEERERER---REKERERE-REREKE 587 Score = 33.9 bits (76), Expect = 0.88 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 4/133 (3%) Query: 217 ERMSGLSAERLQMDEELRRER---EREREREREREADREREKEREREREKEREQEKE-RE 272 E S L+ RL+ L + + E ++ E + D E + + +E E + Sbjct: 503 EAQSDLNKTRLRSGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASKASQEDANEIKS 562 Query: 273 REKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTR 332 + E ERE ER+ ++R RE+E K E + E R A ++ + Sbjct: 563 KRDEEERERERREKEREREREREKEKEREREKQKLKESEKERDSAKDKEKGKHDDGRKKE 622 Query: 333 AEKLKDAGLQAPK 345 AE +K ++ K Sbjct: 623 AEIIKQLKIELKK 635 Score = 31.6 bits (70), Expect = 4.4 Identities = 29/145 (20%), Positives = 64/145 (44%), Gaps = 11/145 (7%) Query: 962 PELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQG 1021 P+ + S Q++ + +E +R+ E+E E + + E E+E + K + Sbjct: 538 PDSEDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKL 597 Query: 1022 IEAVFEAYQ-------EHIEEQNLERQV---LQTQCRRLEARHYSLSLTAEQLSHSVAEL 1071 E+ E +H + + E ++ L+ + ++ + + L + + E Sbjct: 598 KESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQ 657 Query: 1072 RSQKQKMVSERERLQAELDHLRKCL 1096 R + Q M +E+ + +AEL+ LR+ L Sbjct: 658 RDKVQLMAAEK-KSKAELEDLRQRL 681 >gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4 isoform 2 [Homo sapiens] Length = 1320 Score = 70.1 bits (170), Expect = 1e-11 Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 32/234 (13%) Query: 211 LAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKE 270 L A +R+ +R +++E+ RRERE R++ERE+ + EK R E E+ R++E+E Sbjct: 391 LLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEE 450 Query: 271 REREKERERELERQRE--QRAREKELLAAKALEPSFL-PVAELHGLRGHATEERGKPSEQ 327 R R +E +R +ER++E +R E+E + L+ L A L R EE + Sbjct: 451 RRRAEEEKRRVEREQEYIRRQLEEEQRHLEVLQQQLLQEQAMLLECRWREMEEHRQAERL 510 Query: 328 LTPTRAEKLKDAGLQAPKPVQHPLH----PVPTPHHTVPSLISNHGIFSLPSSSAATALL 383 + E+ LQ HP H P P + PS F P A Sbjct: 511 QRQLQQEQAYLLSLQHDHRRPHPQHSQQPPPPQQERSKPS-------FHAPEPKA----- 558 Query: 384 IQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQ--QVLEQHLDMGRPPVPAEAE 435 + E AR+ R K + S ++ +Q +VLE PPVP+ +E Sbjct: 559 ----HYEPADRAREVEDRFRKTNHSSPEAQSKQTGRVLE-------PPVPSRSE 601 Score = 54.3 bits (129), Expect = 6e-07 Identities = 25/78 (32%), Positives = 48/78 (61%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 274 + ER L ++L +++LR + E +R+ ER+ E++KE+ R E+++ +E+E R+ Sbjct: 363 NKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQ 422 Query: 275 KERERELERQREQRAREK 292 +ERE+ Q E+R E+ Sbjct: 423 QEREQRRREQEEKRRLEE 440 Score = 53.1 bits (126), Expect = 1e-06 Identities = 24/68 (35%), Positives = 44/68 (64%) Query: 226 RLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQR 285 +L + + R E+++E+ R E + RERE R++ERE+ R +++E+ R +E ER + + Sbjct: 390 QLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEE 449 Query: 286 EQRAREKE 293 E+R E+E Sbjct: 450 ERRRAEEE 457 Score = 51.2 bits (121), Expect = 5e-06 Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 34/237 (14%) Query: 222 LSAERLQMDEELRREREREREREREREA-DREREKEREREREKEREQEKEREREKERERE 280 L E + E LRR++ + ++ RE+E R+ ER++ E+++EQ + E ++ RERE Sbjct: 359 LQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRRERE 418 Query: 281 LERQ--REQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKD 338 RQ REQR RE+E + LE EL R E R RAE+ K Sbjct: 419 ARRQQEREQRRREQE--EKRRLE-------ELERRRKEEEERR----------RAEEEKR 459 Query: 339 AGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQR 398 + + ++ L + + A+L++ E + + Sbjct: 460 RVEREQEYIRRQLEEEQRHLEVLQQQLLQE-----------QAMLLECRWREMEEHRQAE 508 Query: 399 RLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRH-EPGGR 454 RL+++ + Q+ + + H + P P + E S P P H EP R Sbjct: 509 RLQRQLQQEQAYLLSLQHDHRRPHPQHSQQPPPPQQERSKPSFHAPEPKAHYEPADR 565 Score = 50.8 bits (120), Expect = 7e-06 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 3/79 (3%) Query: 218 RMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE---RE 274 R L ++L+ EE +R+ ER++ E++ ++ R E ++ RE+E +++ERE RE Sbjct: 372 RQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRRE 431 Query: 275 KERERELERQREQRAREKE 293 +E +R LE +R E+E Sbjct: 432 QEEKRRLEELERRRKEEEE 450 Score = 38.1 bits (87), Expect = 0.047 Identities = 65/273 (23%), Positives = 105/273 (38%), Gaps = 27/273 (9%) Query: 627 QQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDE----EEVRAHLRCVAEQPPLKL 682 Q+R R + E+RRRE +EK +L+ E +E EE + + E +L Sbjct: 413 QRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQL 472 Query: 683 DTSSEKLEFLQLFGLTTQ------QQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPS 736 + LE LQ L Q + +E ++ + +R L++ ++Q + P Sbjct: 473 EEEQRHLEVLQQQLLQEQAMLLECRWREMEEHRQAERLQRQLQQEQAYLLSLQHDHRRPH 532 Query: 737 PRLALSTRYSPDEMNNSPNF---EEKKKFLTIFNLTHISAEKRKDKERLVEMLRAMKQKA 793 P+ + P + + P+F E K + + RK E + Sbjct: 533 PQHSQQPP-PPQQERSKPSFHAPEPKAHYEPADRAREVEDRFRKTNHSSPEAQSKQTGRV 591 Query: 794 LSAAV---ADSLTNSPRDSPAVSLSEPATQQ------ASL-DVEKPVGVAASLSDIPKAA 843 L V ++S +N +S +L PA Q ASL + PV + S SD Sbjct: 592 LEPPVPSRSESFSNGNSESVHPALQRPAEPQVQWSHLASLKNNVSPVSRSHSFSDPSPKF 651 Query: 844 EPGKLEQVRPQELSRVQELAPASGEKARLSEAP 876 L P SR + L+ +S K SEAP Sbjct: 652 AHHHLRSQDPCPPSRSEVLSQSSDSK---SEAP 681 Score = 35.0 bits (79), Expect = 0.40 Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 16/125 (12%) Query: 978 QQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHI---- 1033 Q+ AR+ ++ R+ EE+ ++ + +EE +R+ + + E QE+I Sbjct: 413 QRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQL 472 Query: 1034 -EEQN----LERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAE 1088 EEQ L++Q+LQ Q LE R E H AE R Q+Q + L + Sbjct: 473 EEEQRHLEVLQQQLLQEQAMLLECR------WREMEEHRQAE-RLQRQLQQEQAYLLSLQ 525 Query: 1089 LDHLR 1093 DH R Sbjct: 526 HDHRR 530 Score = 31.2 bits (69), Expect = 5.7 Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 4/116 (3%) Query: 975 HNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIE 1034 H + K E EEEEE +++GE V + F Q+ + Sbjct: 305 HIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENK 364 Query: 1035 EQN--LERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAE 1088 E++ L RQ L + + E Y L AE+ E + ++++ + E++R + E Sbjct: 365 ERSEALRRQQLLQEQQLREQEEYKRQLLAERQKR--IEQQKEQRRRLEEQQRRERE 418 Score = 30.4 bits (67), Expect = 9.7 Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 1/113 (0%) Query: 990 TQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQVLQTQCRR 1049 ++ L R +E++ E E + ++ + + IE E + E+Q ER+ + Q R Sbjct: 367 SEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQERE 426 Query: 1050 LEARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAELDHLRKCLALPAMH 1102 R E+L E ++++ E+ R++ E +++R+ L H Sbjct: 427 QRRREQEEKRRLEELERRRKE-EEERRRAEEEKRRVEREQEYIRRQLEEEQRH 478 >gi|14670268 RD RNA-binding protein [Homo sapiens] Length = 380 Score = 68.9 bits (167), Expect = 2e-11 Identities = 26/58 (44%), Positives = 49/58 (84%) Query: 236 EREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKE 293 ER R+R+R+RER+ DR+R+++RER+R+++R+++++RER+++RER+ +R RE R + Sbjct: 193 ERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSD 250 Score = 67.8 bits (164), Expect = 6e-11 Identities = 27/73 (36%), Positives = 52/73 (71%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 274 + ER S+ R ER R+R+R+RE DR+R+++R+RER+++R+++++R+RE Sbjct: 170 YEERSGAHSSASPPRSRSRDRSHERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRE 229 Query: 275 KERERELERQREQ 287 ++R+RE +R R++ Sbjct: 230 RDRDRERDRDRDR 242 Score = 67.4 bits (163), Expect = 7e-11 Identities = 24/55 (43%), Positives = 48/55 (87%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQ 284 D R R+R+R+RER+R+ DR+R++ER+R+R+++R++++ER+R++ER+R+ +R+ Sbjct: 189 DRSHERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDRE 243 Score = 62.4 bits (150), Expect = 2e-09 Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 1/86 (1%) Query: 207 SHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKERE 266 +HSS + S D + R+R+R+R+R+RER+ DR+R+++R+RER+++RE Sbjct: 176 AHSSASPPRSRSRDRSHERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRERDRDRE 235 Query: 267 QEKEREREKERERELERQREQRAREK 292 ++++R+RE R + E+RA K Sbjct: 236 RDRDRDREGPFRRS-DSFPERRAPRK 260 Score = 60.5 bits (145), Expect = 9e-09 Identities = 26/76 (34%), Positives = 49/76 (64%) Query: 230 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 289 D E R+R+R+R+RER+R+ DR+R+++RER+R++ER+++++RE R +R R Sbjct: 201 DRERDRDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPRK 260 Query: 290 REKELLAAKALEPSFL 305 + + + P+ L Sbjct: 261 GNTLYVYGEDMTPTLL 276 >gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B [Homo sapiens] Length = 546 Score = 68.2 bits (165), Expect = 4e-11 Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 8/82 (9%) Query: 217 ERMSGLSAER-LQMDEELRREREREREREREREADR-----EREKEREREREKEREQEKE 270 ER S +R L+ RER R R R R+R+ DR EREKE ER R ++R+ +KE Sbjct: 314 ERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKE 373 Query: 271 R--EREKERERELERQREQRAR 290 R EREKERER ER +EQR+R Sbjct: 374 RGNEREKERERSRERSKEQRSR 395 Score = 61.6 bits (148), Expect = 4e-09 Identities = 30/75 (40%), Positives = 46/75 (61%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 ER S R + + R+RERE+E ER R DR+ +KER EREKERE+ +ER +E+ Sbjct: 334 ERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQR 393 Query: 277 RERELERQREQRARE 291 E+E ++ + ++ Sbjct: 394 SRGEVEEKKHKEDKD 408 Score = 60.1 bits (144), Expect = 1e-08 Identities = 30/77 (38%), Positives = 45/77 (58%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 ER S ER + R + R+R+RERE + ER + R+R+ +KER E+E+ERE+ Sbjct: 326 ERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERS 385 Query: 277 RERELERQREQRAREKE 293 RER E++ EK+ Sbjct: 386 RERSKEQRSRGEVEEKK 402 Score = 56.6 bits (135), Expect = 1e-07 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 2/126 (1%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERER- 273 H R + + D + RE+E ER R R+R+ D+ER ERE+ERE+ RE+ KE+ Sbjct: 336 HRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSR 395 Query: 274 -EKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTR 332 E E ++ E + ++R R+ + + K + S E + GK S + + Sbjct: 396 GEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEK 455 Query: 333 AEKLKD 338 + K K+ Sbjct: 456 SSKHKN 461 Score = 53.1 bits (126), Expect = 1e-06 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 215 HSERMSGLSAER-LQMDEELRREREREREREREREADREREKEREREREKEREQEKERER 273 H ER S R L RR R R RE + +RE ERE+ER++ + KERE+ Sbjct: 254 HVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREK 313 Query: 274 EKERERELER---QREQRAREK 292 E+ R R ++R +R R+RE+ Sbjct: 314 ERRRSRSIDRGLERRRSRSRER 335 Score = 45.8 bits (107), Expect = 2e-04 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 9/100 (9%) Query: 231 EELRREREREREREREREADREREKEREREREKEREQ------EKEREREKERERELERQ 284 EE+ R ER R R R R R R R RE ++E EREKER+R LER+ Sbjct: 249 EEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQR-LERE 307 Query: 285 REQRAREKELLAA--KALEPSFLPVAELHGLRGHATEERG 322 ++R +E+ + + LE E H R + + +G Sbjct: 308 AKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKG 347 Score = 38.5 bits (88), Expect = 0.036 Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 4/56 (7%) Query: 242 EREREREADREREKEREREREKEREQEKEREREKERERELERQR----EQRAREKE 293 E+ ++RE +EK R+R R KER +++ K++ + +R+R EQ ++EK+ Sbjct: 483 EKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQ 538 Score = 38.1 bits (87), Expect = 0.047 Identities = 20/63 (31%), Positives = 30/63 (47%) Query: 231 EELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAR 290 +E E +R ER R R R R R + R +E +RELER++E++ Sbjct: 245 KEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRL 304 Query: 291 EKE 293 E+E Sbjct: 305 ERE 307 Score = 37.4 bits (85), Expect = 0.080 Identities = 16/72 (22%), Positives = 36/72 (50%) Query: 220 SGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERER 279 SG +++ +RE +E+ R+R +ER +R+ K++ + +R R + E+ Sbjct: 473 SGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQ 532 Query: 280 ELERQREQRARE 291 E + ++ + E Sbjct: 533 ESQEKQHKNKDE 544 Score = 37.0 bits (84), Expect = 0.10 Identities = 18/65 (27%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 230 DEELRREREREREREREREADREREKERE-REREKEREQEKE-REREKERERELERQREQ 287 D++ RR R+ +R+ ++E++ R R +ER+ R R + R K R R KE+ + + + ++ Sbjct: 406 DKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKE 465 Query: 288 RAREK 292 ++ ++ Sbjct: 466 KSNKR 470 Score = 36.2 bits (82), Expect = 0.18 Identities = 11/63 (17%), Positives = 35/63 (55%) Query: 231 EELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAR 290 + + + ++RE +E+ R R KER +R+ +++ + ++ R + +E++ +++ Sbjct: 480 DSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQH 539 Query: 291 EKE 293 + + Sbjct: 540 KNK 542 Score = 35.0 bits (79), Expect = 0.40 Identities = 17/76 (22%), Positives = 34/76 (44%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 E+ S E + E+ R R+ +R+ ++E R + RER+ +R + Sbjct: 391 EQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRS 450 Query: 277 RERELERQREQRAREK 292 R +E + + ++EK Sbjct: 451 RSKEKSSKHKNESKEK 466 Score = 34.3 bits (77), Expect = 0.67 Identities = 18/79 (22%), Positives = 34/79 (43%) Query: 205 ELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKE 264 E H S + + S + + + +E+ +R R R E+ ++RE Sbjct: 432 ERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHS 491 Query: 265 REQEKEREREKERERELER 283 +EK R+R + +ER +R Sbjct: 492 PSKEKSRKRSRSKERSHKR 510 Score = 33.9 bits (76), Expect = 0.88 Identities = 17/76 (22%), Positives = 34/76 (44%) Query: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 276 +R S E+ + +E+ +R R + EK ++RE +E+ ++R R KE Sbjct: 446 KRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKE 505 Query: 277 RERELERQREQRAREK 292 R + + + +K Sbjct: 506 RSHKRDHSDSKDQSDK 521 Score = 31.2 bits (69), Expect = 5.7 Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 4/105 (3%) Query: 231 EELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAR 290 +E + R R RER+ + +R R R KE+ K + KE+ + R Q R Sbjct: 421 KEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEK-SSKHKNESKEKSNKRSRSGSQ-GR 478 Query: 291 EKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEK 335 + +K E S P E R + E K + +++K Sbjct: 479 TDSVEKSKKREHS--PSKEKSRKRSRSKERSHKRDHSDSKDQSDK 521 Score = 30.4 bits (67), Expect = 9.7 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 11/85 (12%) Query: 215 HSERMSGLSAERLQMDEELRREREREREREREREADRE-REKERERER----------EK 263 HS S R + +R R R +E+ + E +EK +R R EK Sbjct: 425 HSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEK 484 Query: 264 EREQEKEREREKERERELERQREQR 288 +++E +EK R+R ++R + Sbjct: 485 SKKREHSPSKEKSRKRSRSKERSHK 509 >gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo sapiens] Length = 1130 Score = 67.8 bits (164), Expect = 6e-11 Identities = 121/489 (24%), Positives = 163/489 (33%), Gaps = 98/489 (20%) Query: 5 IVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAG 64 + PP S PP P +V + + AG S+G P+P + G Sbjct: 651 VPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAG---------PVPSARPG 701 Query: 65 GPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVV-------------PPSTVT 111 P +HL GLS +V PP L P +H PP T+ Sbjct: 702 PPTTANHL-------GLSVPGLVS---VPPRLLPGPENHRAGSNEDPILAPSGTPPPTIP 751 Query: 112 EDYL---RSFRPYHTTDDLRMSS--------------------LPPLGLDPATAAAYYHP 148 D R RP D +S LPPL P + A Sbjct: 752 PDETFGGRVPRPAFVHYDKEEASDVEISLESDSDDSVVIVPEGLPPLPPPPPSGATPPPI 811 Query: 149 SYLAPHPFPHPAFRMDDSYCLSALRSPFYP-------IPTPGSLPPLHPSAMHLHLSGVR 201 + P P ++ L A P P +P P +LPP P + G Sbjct: 812 APTGPPTASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTLPP--PQLVPEGTPGGG 869 Query: 202 YPPELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKERERER 261 PP L L ++ S E + +EE E E E E E + E + E E+E E Sbjct: 870 GPPALEED-LTVININS----SDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEE 924 Query: 262 EKEREQEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEER 321 E+E E+ +E E+E E E E + E E+EL + LE G G EE Sbjct: 925 EEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE---------FGTAGGEVEEG 975 Query: 322 GKPSEQLTPTRAEKLKDAGLQAPKPVQHP-LHPVPTPHHTV------PSLISNHGIFSLP 374 P L P P P P + P P P + P G + P Sbjct: 976 APPPPTLPPA-----------LPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAP 1024 Query: 375 SSSAATALLIQRTNEEEKWLARQRRLRQE-KEDRQSQVSEFRQQVLEQHLDMGRPPVPAE 433 + A AL Q E E QE E+ S ++ E D +PP Sbjct: 1025 -TLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETP 1083 Query: 434 AEHRPESTT 442 AE E+ T Sbjct: 1084 AEEEMETET 1092 Score = 42.4 bits (98), Expect = 0.002 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 10/86 (11%) Query: 962 PELQSSSRAPPPQHNGQQEPPTARKGPPTQELD--------RDSEEEEEEDDEDGEDEEE 1013 P + PPPQ + P GPP E D D EEEEEE++E+ E+EEE Sbjct: 847 PPVPGPVTLPPPQLVPEGTPGGG--GPPALEEDLTVININSSDEEEEEEEEEEEEEEEEE 904 Query: 1014 VPKRKWQGIEAVFEAYQEHIEEQNLE 1039 + ++ E E Y E EE+ E Sbjct: 905 EEEEDFEEEEEDEEEYFEEEEEEEEE 930 Score = 39.7 bits (91), Expect = 0.016 Identities = 19/49 (38%), Positives = 31/49 (63%) Query: 991 QELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLE 1039 +E + + EEEEEE++ED E+EEE + ++ E E ++E EE+ E Sbjct: 893 EEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGE 941 Score = 34.3 bits (77), Expect = 0.67 Identities = 69/328 (21%), Positives = 118/328 (35%), Gaps = 49/328 (14%) Query: 547 PPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSGPLKPGS 606 P PPPP G + P + GP A S ++ LP A GPL P Sbjct: 797 PLPPPPPSGAT---PPPIAPTGPPTA----SPPVPAKEEPEELPAAP------GPLPPPP 843 Query: 607 PYRPPVP---RAPDPAYIYD--------EFLQQRRRLV---SKLDLEERRRREAQEKGYY 652 P PPVP P P + + L++ ++ S + EE E +E+ Sbjct: 844 PPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEE 903 Query: 653 YDLDDSYDESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRR 712 + ++ ++E +E+E E+ + + E+ E + ++++EEL + Sbjct: 904 EEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDL 963 Query: 713 K---RRRMLRERSPSPPTIQSKRQTPSPRLALSTRYSPDE----MNNSPNFEEKKKFLTI 765 + + E +P PPT+ P + P+ P EE++ T Sbjct: 964 EFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTA 1023 Query: 766 FNLTHISAEKRKDKER-------------LVEMLRAMKQKALSAAVAD--SLTNSPRDSP 810 L + + + ER LVE + L D P ++P Sbjct: 1024 PTLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETP 1083 Query: 811 AVSLSEPATQQASLDVEKPVGVAASLSD 838 A E T+ +L ++ AA L+D Sbjct: 1084 AEEEMETETEAEALQEKEQDDTAAMLAD 1111 Score = 33.9 bits (76), Expect = 0.88 Identities = 57/231 (24%), Positives = 80/231 (34%), Gaps = 25/231 (10%) Query: 403 EKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTT-RPGPNRHEPGG-RDPPQHF 460 ++ED +VS F + L + P VP P T P P P R PP H Sbjct: 609 QRED-SLEVSSFCSEALVTCAALTHPRVPPLQPMGPTCPTPAPVPPPEAPSPFRAPPFHP 667 Query: 461 GGPPPLISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVK 520 GP P + P P+A P + + + R + +H P LV Sbjct: 668 PGPMPSVGSMPSAGPMPSAGPMPSA---GPVPSARPGPPTTANHLGLSVPG------LVS 718 Query: 521 VERVFCPEKAEEGPRKREPAPLDKYQPPPP--PPRE--GGSLEHQPFLPGPGPFLAELEK 576 V P E L PPP PP E GG + F+ +++E Sbjct: 719 VPPRLLPGPENHRAGSNEDPILAPSGTPPPTIPPDETFGGRVPRPAFVHYDKEEASDVEI 778 Query: 577 STQT-------ILGQQRASLPQAATFGELSGPLKPGSP--YRPPVPRAPDP 618 S ++ I+ + LP G P+ P P PPVP +P Sbjct: 779 SLESDSDDSVVIVPEGLPPLPPPPPSGATPPPIAPTGPPTASPPVPAKEEP 829 Score = 32.7 bits (73), Expect = 2.0 Identities = 15/33 (45%), Positives = 18/33 (54%) Query: 971 PPPQHNGQQEPPTARKGPPTQELDRDSEEEEEE 1003 PPP +G PP A GPPT ++EE EE Sbjct: 799 PPPPPSGATPPPIAPTGPPTASPPVPAKEEPEE 831 Score = 32.3 bits (72), Expect = 2.6 Identities = 54/247 (21%), Positives = 80/247 (32%), Gaps = 68/247 (27%) Query: 390 EEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRH 449 EE++ + L +E+E+ + E ++V + L+ G E P T P Sbjct: 932 EEEFEEEEGELEEEEEEEDEEEEEELEEV--EDLEFGTAGGEVEEGAPPPPTLPPA---- 985 Query: 450 EPGGRDPPQHFGGPPPLISPKPQ-------------------LHAAPTALWNPVSLMDNT 490 PP+ PP + P+P+ APT P +L Sbjct: 986 ----LPPPES----PPKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTLA--PEALPSQG 1035 Query: 491 LETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPP 550 R ES PAA P ++ E+ E+G DK QPPP Sbjct: 1036 EVEREGES------PAAGPPPQELVEEEPSAPPTLLEEETEDGS--------DKVQPPPE 1081 Query: 551 PPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSGPLKPGSPYRP 610 P E E+E T+ Q++ AA + P +P Sbjct: 1082 TPAE-----------------EEMETETEAEALQEKEQDDTAAMLADFID--CPPDDEKP 1122 Query: 611 PVPRAPD 617 P P PD Sbjct: 1123 PPPTEPD 1129 Score = 30.8 bits (68), Expect = 7.5 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 8/70 (11%) Query: 970 APPPQHNGQQEPPTARKGPPTQELDRDSEEEE----EEDDEDGEDE----EEVPKRKWQG 1021 A P Q ++E + GPP QEL + EE+ EDG D+ E P + Sbjct: 1030 ALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETPAEEEME 1089 Query: 1022 IEAVFEAYQE 1031 E EA QE Sbjct: 1090 TETEAEALQE 1099 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.130 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,001,595 Number of Sequences: 37866 Number of extensions: 3579163 Number of successful extensions: 88005 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1123 Number of HSP's successfully gapped in prelim test: 1249 Number of HSP's that attempted gapping in prelim test: 27175 Number of HSP's gapped (non-prelim): 29407 length of query: 1113 length of database: 18,247,518 effective HSP length: 113 effective length of query: 1000 effective length of database: 13,968,660 effective search space: 13968660000 effective search space used: 13968660000 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.