Guide to the Human Genome
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Search of human proteins with 195546891

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|195546891 RAB, member RAS oncogene family-like 5 isoform c
[Homo sapiens]
         (108 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|195546894 RAB, member RAS oncogene family-like 5 isoform c [H...   222   4e-59
gi|195546891 RAB, member RAS oncogene family-like 5 isoform c [H...   222   4e-59
gi|195546889 RAB, member RAS oncogene family-like 5 isoform b [H...   222   4e-59
gi|12232463 RAB, member RAS oncogene family-like 5 isoform a [Ho...   222   4e-59
gi|122056685 peptidylarginine deiminase type I [Homo sapiens]          32   0.11 
gi|239756748 PREDICTED: similar to keratin 17 [Homo sapiens]           30   0.32 
gi|113426703 PREDICTED: similar to keratin 17 [Homo sapiens]           30   0.32 
gi|113426673 PREDICTED: similar to keratin 17 [Homo sapiens]           30   0.32 
gi|169210813 PREDICTED: similar to keratin 17 [Homo sapiens]           30   0.32 
gi|221316624 dystonin isoform 4 [Homo sapiens]                         29   0.93 
gi|221316622 dystonin isoform 3 [Homo sapiens]                         29   0.93 
gi|221316618 dystonin isoform 2 [Homo sapiens]                         29   0.93 
gi|34577047 dystonin isoform 1 [Homo sapiens]                          29   0.93 
gi|20357504 dystonin isoform 1eB precursor [Homo sapiens]              29   0.93 
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]              29   0.93 
gi|4502443 dystonin isoform 1e precursor [Homo sapiens]                29   0.93 
gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]           27   2.7  
gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo ...    27   2.7  
gi|157738645 plexin A4 isoform 1 [Homo sapiens]                        27   2.7  
gi|197276647 leucine rich repeat (in FLII) interacting protein 2...    27   2.7  
gi|5453726 leucine rich repeat (in FLII) interacting protein 2 i...    27   2.7  
gi|113722116 plexin A2 [Homo sapiens]                                  27   2.7  
gi|5032223 plexin C1 [Homo sapiens]                                    27   2.7  
gi|17978466 cyclin T1 [Homo sapiens]                                   27   3.5  
gi|49355818 plexin A1 [Homo sapiens]                                   26   6.0  
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s...    26   6.0  
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s...    26   6.0  
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s...    26   6.0  
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s...    26   6.0  
gi|117553586 dedicator of cytokinesis 5 [Homo sapiens]                 26   6.0  

>gi|195546894 RAB, member RAS oncogene family-like 5 isoform c [Homo
           sapiens]
          Length = 108

 Score =  222 bits (566), Expect = 4e-59
 Identities = 108/108 (100%), Positives = 108/108 (100%)

Query: 1   MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS 60
           MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS
Sbjct: 1   MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS 60

Query: 61  PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT 108
           PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT
Sbjct: 61  PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT 108


>gi|195546891 RAB, member RAS oncogene family-like 5 isoform c [Homo
           sapiens]
          Length = 108

 Score =  222 bits (566), Expect = 4e-59
 Identities = 108/108 (100%), Positives = 108/108 (100%)

Query: 1   MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS 60
           MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS
Sbjct: 1   MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS 60

Query: 61  PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT 108
           PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT
Sbjct: 61  PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT 108


>gi|195546889 RAB, member RAS oncogene family-like 5 isoform b [Homo
           sapiens]
          Length = 155

 Score =  222 bits (566), Expect = 4e-59
 Identities = 108/108 (100%), Positives = 108/108 (100%)

Query: 1   MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS 60
           MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS
Sbjct: 48  MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS 107

Query: 61  PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT 108
           PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT
Sbjct: 108 PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT 155


>gi|12232463 RAB, member RAS oncogene family-like 5 isoform a [Homo
           sapiens]
          Length = 185

 Score =  222 bits (566), Expect = 4e-59
 Identities = 108/108 (100%), Positives = 108/108 (100%)

Query: 1   MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS 60
           MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS
Sbjct: 78  MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLS 137

Query: 61  PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT 108
           PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT
Sbjct: 138 PPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT 185


>gi|122056685 peptidylarginine deiminase type I [Homo sapiens]
          Length = 663

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 3   DAHGVVIVFNADIPSHRK-EMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLSP 61
           + +G +++ N D  +HR  E ++ +S  +    LQD   ML++ + P    D   L L+ 
Sbjct: 144 EGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFDSHKLVLNV 203

Query: 62  PLNKLKLV 69
           P +  K V
Sbjct: 204 PFSDSKRV 211


>gi|239756748 PREDICTED: similar to keratin 17 [Homo sapiens]
          Length = 103

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 53  DKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           + GSL L   L+KL L  +NLE  PE ++ + + YLK     +S ++  ++
Sbjct: 24  EAGSLELPQGLDKLTLPGANLEMQPENLKEDLV-YLKKNHEEVSSAQGMQQ 73


>gi|113426703 PREDICTED: similar to keratin 17 [Homo sapiens]
          Length = 103

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 53  DKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           + GSL L   L+KL L  +NLE  PE ++ + + YLK     +S ++  ++
Sbjct: 24  EAGSLELPQGLDKLTLPGANLEMQPENLKEDLV-YLKKNHEEVSSAQGMQQ 73


>gi|113426673 PREDICTED: similar to keratin 17 [Homo sapiens]
          Length = 103

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 53  DKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           + GSL L   L+KL L  +NLE  PE ++ + + YLK     +S ++  ++
Sbjct: 24  EAGSLELPQGLDKLTLPGANLEMQPENLKEDLV-YLKKNHEEVSSAQGMQQ 73


>gi|169210813 PREDICTED: similar to keratin 17 [Homo sapiens]
          Length = 103

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 53  DKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           + GSL L   L+KL L  +NLE  PE ++ + + YLK     +S ++  ++
Sbjct: 24  EAGSLELPQGLDKLTLPGANLEMQPENLKEDLV-YLKKNHEEVSSAQGMQQ 73


>gi|221316624 dystonin isoform 4 [Homo sapiens]
          Length = 5526

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 47  KPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           +P S      + +  PL K  L+  NL +  EEI M+F++ L + ++ M    DR E
Sbjct: 601 EPNSLQTLKLMQIRKPLLKSSLLDQNLTE--EEINMKFVQDLLNWVDEMQVQLDRTE 655


>gi|221316622 dystonin isoform 3 [Homo sapiens]
          Length = 5537

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 47  KPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           +P S      + +  PL K  L+  NL +  EEI M+F++ L + ++ M    DR E
Sbjct: 612 EPNSLQTLKLMQIRKPLLKSSLLDQNLTE--EEINMKFVQDLLNWVDEMQVQLDRTE 666


>gi|221316618 dystonin isoform 2 [Homo sapiens]
          Length = 5675

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 47  KPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           +P S      + +  PL K  L+  NL +  EEI M+F++ L + ++ M    DR E
Sbjct: 750 EPNSLQTLKLMQIRKPLLKSSLLDQNLTE--EEINMKFVQDLLNWVDEMQVQLDRTE 804


>gi|34577047 dystonin isoform 1 [Homo sapiens]
          Length = 5497

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 47  KPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           +P S      + +  PL K  L+  NL +  EEI M+F++ L + ++ M    DR E
Sbjct: 572 EPNSLQTLKLMQIRKPLLKSSLLDQNLTE--EEINMKFVQDLLNWVDEMQVQLDRTE 626


>gi|20357504 dystonin isoform 1eB precursor [Homo sapiens]
          Length = 3062

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 47  KPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           +P S      + +  PL K  L+  NL +  EEI M+F++ L + ++ M    DR E
Sbjct: 246 EPNSLQTLKLMQIRKPLLKSSLLDQNLTE--EEINMKFVQDLLNWVDEMQVQLDRTE 300


>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
          Length = 5171

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 47  KPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           +P S      + +  PL K  L+  NL +  EEI M+F++ L + ++ M    DR E
Sbjct: 246 EPNSLQTLKLMQIRKPLLKSSLLDQNLTE--EEINMKFVQDLLNWVDEMQVQLDRTE 300


>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
          Length = 2649

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 47  KPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
           +P S      + +  PL K  L+  NL +  EEI M+F++ L + ++ M    DR E
Sbjct: 246 EPNSLQTLKLMQIRKPLLKSSLLDQNLTE--EEINMKFVQDLLNWVDEMQVQLDRTE 300


>gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]
          Length = 167

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 37  DTQCMLIAHHKPGSGDDKGSLSLSPPLNKLKLVHSNL 73
           + QC L++ HKP    D G+ S + P   L  + S L
Sbjct: 117 ELQCFLLSVHKPHCFPDPGAFSRTSPSPPLTTIGSGL 153


>gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
           sapiens]
          Length = 167

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 37  DTQCMLIAHHKPGSGDDKGSLSLSPPLNKLKLVHSNL 73
           + QC L++ HKP    D G+ S + P   L  + S L
Sbjct: 117 ELQCFLLSVHKPHCFPDPGAFSRTSPSPPLTTIGSGL 153


>gi|157738645 plexin A4 isoform 1 [Homo sapiens]
          Length = 1894

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 11/36 (30%), Positives = 22/36 (61%)

Query: 2    KDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQD 37
            KD+    +++  DIPS++  +E +YS   + P++ D
Sbjct: 1791 KDSPSNKLLYAKDIPSYKNWVERYYSDIGKMPAISD 1826


>gi|197276647 leucine rich repeat (in FLII) interacting protein 2
           isoform 3 [Homo sapiens]
          Length = 424

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 13/60 (21%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 49  GSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT 108
           GSGD    +     L++L+ ++ +L+D  +++   +++ LK +  S+SE  ++ + ++++
Sbjct: 95  GSGDTSSLIDPDTSLSELRDIY-DLKDQIQDVEGRYMQGLKELKESLSEVEEKYKKAMVS 153


>gi|5453726 leucine rich repeat (in FLII) interacting protein 2
           isoform 1 [Homo sapiens]
          Length = 721

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 13/60 (21%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 49  GSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT 108
           GSGD    +     L++L+ ++ +L+D  +++   +++ LK +  S+SE  ++ + ++++
Sbjct: 327 GSGDTSSLIDPDTSLSELRDIY-DLKDQIQDVEGRYMQGLKELKESLSEVEEKYKKAMVS 385


>gi|113722116 plexin A2 [Homo sapiens]
          Length = 1894

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 10/103 (9%)

Query: 2    KDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLSP 61
            KD+    +++  DIPS++  +E +Y+   + P++ D    + A+    S       ++  
Sbjct: 1791 KDSPSNKLLYAKDIPSYKSWVERYYADIAKLPAISDQD--MNAYLAEQSRLHAVEFNMLS 1848

Query: 62   PLNKLKLVHSN--------LEDDPEEIRMEFIKYLKSIINSMS 96
             LN++    S         LE D +  R      ++ +IN+MS
Sbjct: 1849 ALNEIYSYVSKYSEELIGALEQDEQARRQRLAYKVEQLINAMS 1891


>gi|5032223 plexin C1 [Homo sapiens]
          Length = 1568

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 20/104 (19%)

Query: 2    KDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQC--MLIAHHKPGSGDDKGSLSL 59
            K+A    +++  DIP++++E++ +Y      P L  ++    L    K    +    ++L
Sbjct: 1462 KEAPTNKLLYAKDIPTYKEEVKSYYKAIRDLPPLSSSEMEEFLTQESKKHENEFNEEVAL 1521

Query: 60   SPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREE 103
            +                  EI    +KY   I+N +   R  EE
Sbjct: 1522 T------------------EIYKYIVKYFDEILNKLERERGLEE 1547


>gi|17978466 cyclin T1 [Homo sapiens]
          Length = 726

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 48  PGSGDDKGSLSLSPPLNKLKLVHSNLEDDP 77
           PG   D   LS S P  K ++ HS L+  P
Sbjct: 614 PGHSSDTSGLSFSQPSCKTRVPHSKLDKGP 643


>gi|49355818 plexin A1 [Homo sapiens]
          Length = 1873

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 9/36 (25%), Positives = 22/36 (61%)

Query: 2    KDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQD 37
            KD+    +++  DIP+++  +E +Y+   + P++ D
Sbjct: 1770 KDSPSNKLLYAKDIPNYKSWVERYYADIAKMPAISD 1805


>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
           sapiens]
          Length = 1424

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 32  QPSLQDTQCMLIAHHKPGSGDDKGSLSLSPPL 63
           +P LQ TQ +  A   PG    +G LS+S P+
Sbjct: 623 EPGLQGTQGVPGAPGPPGEAGPRGELSVSTPV 654


>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
           sapiens]
          Length = 1494

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 32  QPSLQDTQCMLIAHHKPGSGDDKGSLSLSPPL 63
           +P LQ TQ +  A   PG    +G LS+S P+
Sbjct: 623 EPGLQGTQGVPGAPGPPGEAGPRGELSVSTPV 654


>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
           sapiens]
          Length = 1637

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 32  QPSLQDTQCMLIAHHKPGSGDDKGSLSLSPPL 63
           +P LQ TQ +  A   PG    +G LS+S P+
Sbjct: 623 EPGLQGTQGVPGAPGPPGEAGPRGELSVSTPV 654


>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
           sapiens]
          Length = 1670

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 32  QPSLQDTQCMLIAHHKPGSGDDKGSLSLSPPL 63
           +P LQ TQ +  A   PG    +G LS+S P+
Sbjct: 623 EPGLQGTQGVPGAPGPPGEAGPRGELSVSTPV 654


>gi|117553586 dedicator of cytokinesis 5 [Homo sapiens]
          Length = 1870

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 51  GDDKGSLSLSPPLNKLKLVHSNLEDDPEE----IRMEFIKYLKSIINSMSESRDREEMSI 106
           G  K     +  + +L L  + L D P E    I+   +KYL SIIN +    D  E+S+
Sbjct: 779 GQSKDGDEFNNSIRQLFLAFNMLMDRPLEEAVKIKGAALKYLPSIINDVKLVFDPVELSV 838

Query: 107 M 107
           +
Sbjct: 839 L 839


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,259,100
Number of Sequences: 37866
Number of extensions: 175840
Number of successful extensions: 494
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 473
Number of HSP's gapped (non-prelim): 34
length of query: 108
length of database: 18,247,518
effective HSP length: 78
effective length of query: 30
effective length of database: 15,293,970
effective search space: 458819100
effective search space used: 458819100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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