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Search of human proteins with 194473684
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194473684 chondroitin sulfate
N-acetylgalactosaminyltransferase 1 [Homo sapiens]
(532 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransfera... 1083 0.0
gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransfera... 1083 0.0
gi|24429592 chondroitin sulfate N-acetylgalactosaminyltransferas... 668 0.0
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 206 3e-53
gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens] 194 2e-49
gi|239757870 PREDICTED: novel protein similar to chondroitin sul... 154 3e-37
gi|239752388 PREDICTED: novel protein similar to chondroitin sul... 154 3e-37
gi|239746905 PREDICTED: novel protein similar to chondroitin sul... 154 3e-37
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 91 2e-18
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 85 1e-16
gi|27545323 chondroitin polymerizing factor [Homo sapiens] 60 4e-09
gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens] 49 1e-05
gi|4505257 moesin [Homo sapiens] 37 0.059
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 35 0.17
gi|161702986 ezrin [Homo sapiens] 35 0.22
gi|21614499 ezrin [Homo sapiens] 35 0.22
gi|253735778 Rho/Rac guanine nucleotide exchange factor 2 isofor... 35 0.22
gi|253735775 Rho/Rac guanine nucleotide exchange factor 2 isofor... 35 0.22
gi|15011974 Rho/Rac guanine nucleotide exchange factor 2 isoofor... 35 0.22
gi|53759113 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2... 34 0.29
gi|4502347 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ... 34 0.29
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 33 0.50
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 33 0.50
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 33 0.50
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom... 33 0.50
gi|45439327 periplakin [Homo sapiens] 33 0.50
gi|225637489 hypothetical protein LOC54777 [Homo sapiens] 33 0.65
gi|61658642 interleukin 32 isoform B [Homo sapiens] 33 0.65
gi|61658640 interleukin 32 isoform D [Homo sapiens] 33 0.65
gi|61658638 interleukin 32 isoform C [Homo sapiens] 33 0.65
>gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransferase
1 [Homo sapiens]
Length = 532
Score = 1083 bits (2802), Expect = 0.0
Identities = 532/532 (100%), Positives = 532/532 (100%)
Query: 1 MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAV 60
MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAV
Sbjct: 1 MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAV 60
Query: 61 LQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASDAAGLGLDRSPPEKTQADL 120
LQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASDAAGLGLDRSPPEKTQADL
Sbjct: 61 LQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASDAAGLGLDRSPPEKTQADL 120
Query: 121 LAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL 180
LAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL
Sbjct: 121 LAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL 180
Query: 181 VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLI 240
VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLI
Sbjct: 181 VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLI 240
Query: 241 LFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVDKFRQFMQNFREMCIEQDGRVHLTVVY 300
LFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVDKFRQFMQNFREMCIEQDGRVHLTVVY
Sbjct: 241 LFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVDKFRQFMQNFREMCIEQDGRVHLTVVY 300
Query: 301 FGKEEINEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVD 360
FGKEEINEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVD
Sbjct: 301 FGKEEINEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVD 360
Query: 361 IYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRD 420
IYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRD
Sbjct: 361 IYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRD 420
Query: 421 FGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKR 480
FGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKR
Sbjct: 421 FGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKR 480
Query: 481 CMDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSKKT 532
CMDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSKKT
Sbjct: 481 CMDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSKKT 532
>gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransferase
1 [Homo sapiens]
Length = 532
Score = 1083 bits (2802), Expect = 0.0
Identities = 532/532 (100%), Positives = 532/532 (100%)
Query: 1 MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAV 60
MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAV
Sbjct: 1 MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAV 60
Query: 61 LQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASDAAGLGLDRSPPEKTQADL 120
LQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASDAAGLGLDRSPPEKTQADL
Sbjct: 61 LQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASDAAGLGLDRSPPEKTQADL 120
Query: 121 LAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL 180
LAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL
Sbjct: 121 LAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL 180
Query: 181 VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLI 240
VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLI
Sbjct: 181 VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLI 240
Query: 241 LFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVDKFRQFMQNFREMCIEQDGRVHLTVVY 300
LFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVDKFRQFMQNFREMCIEQDGRVHLTVVY
Sbjct: 241 LFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVDKFRQFMQNFREMCIEQDGRVHLTVVY 300
Query: 301 FGKEEINEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVD 360
FGKEEINEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVD
Sbjct: 301 FGKEEINEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVD 360
Query: 361 IYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRD 420
IYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRD
Sbjct: 361 IYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRD 420
Query: 421 FGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKR 480
FGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKR
Sbjct: 421 FGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKR 480
Query: 481 CMDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSKKT 532
CMDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSKKT
Sbjct: 481 CMDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSKKT 532
>gi|24429592 chondroitin sulfate N-acetylgalactosaminyltransferase 2
[Homo sapiens]
Length = 542
Score = 668 bits (1723), Expect = 0.0
Identities = 326/540 (60%), Positives = 410/540 (75%), Gaps = 13/540 (2%)
Query: 3 MVRRGLLAWISRVVVLL--VLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAV 60
M RRGL+ +LL LLC + +Y+L C P+ D GKE YQA+
Sbjct: 1 MPRRGLILHTRTHWLLLGLALLCSLVLFMYLLECAPQTDGNASLPGVVGENYGKEYYQAL 60
Query: 61 LQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASDAA-GLGLDRSPPEKTQAD 119
LQE EE ++ +SLKRQIAQLK+ELQE SE++R+ Q + + A G+G +S E+ +D
Sbjct: 61 LQEQEEHYQTRATSLKRQIAQLKQELQEMSEKMRSLQERRNVGANGIGY-QSNKEQAPSD 119
Query: 120 LLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDE 179
LL FLHSQ+DKAEV+ G KL +EY +PF+SFTL KV+QLE GLTRHPEEKPVRKDKRDE
Sbjct: 120 LLEFLHSQIDKAEVSIGAKLPSEYGVIPFESFTLMKVFQLEMGLTRHPEEKPVRKDKRDE 179
Query: 180 LVEAIESALETLNSPAENSPNHRP---------YTASDFIEGIYRTERDKGTLYELTFKG 230
LVE IE+ LE +N+P E+ + +DF+EG YRTERDKGT YEL FK
Sbjct: 180 LVEVIEAGLEVINNPDEDDEQEDEEGPLGEKLIFNENDFVEGYYRTERDKGTQYELFFKK 239
Query: 231 DHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVDKFRQFMQNFREMCIEQ 290
E++ + LFRPFGP+MKVK+E +++ ++IN+IVPLA+R + F QFMQNFR++CI Q
Sbjct: 240 ADLTEYRHVTLFRPFGPLMKVKSEMIDITRSIINIIVPLAERTEAFVQFMQNFRDVCIHQ 299
Query: 291 DGRVHLTVVYFGKEEINEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGS 350
D ++HLTVVYFGKE +++VK ILE+ + +NF N+T + LN EF+RG+GL+VGAR W
Sbjct: 300 DKKIHLTVVYFGKEGLSKVKSILESVTSESNFHNYTLVSLNEEFNRGRGLNVGARAWDKG 359
Query: 351 NVLLFFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLV 410
VL+FFCDVDIYF++EFLN+CRLN +PGKKVFYPV+FS YNP I+Y + + PP+EQQLV
Sbjct: 360 EVLMFFCDVDIYFSAEFLNSCRLNAEPGKKVFYPVVFSLYNPAIVYANQEVPPPVEQQLV 419
Query: 411 IKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVR 470
KK++GFWRDFGFGMTCQYRSDF+ IGGFD+++KGWGGEDVHLYRKYLH +LIV+RTPV
Sbjct: 420 HKKDSGFWRDFGFGMTCQYRSDFLTIGGFDMEVKGWGGEDVHLYRKYLHGDLIVIRTPVP 479
Query: 471 GLFHLWHEKRCMDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSK 530
GLFHLWHEKRC DELTPEQY+MC+QSKAMNEASH LGMLVFR EIE HL KQ +T+S+
Sbjct: 480 GLFHLWHEKRCADELTPEQYRMCIQSKAMNEASHSHLGMLVFREEIETHLHKQAYRTNSE 539
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 206 bits (525), Expect = 3e-53
Identities = 111/274 (40%), Positives = 159/274 (58%), Gaps = 19/274 (6%)
Query: 263 INVIVPLAKRVDKFRQFMQNFREMCIEQDGRVHLTVVYFGKEE-------INEVKGILEN 315
++++VPL R D F +FM+NF MC+ V L ++ F ++ I +KG
Sbjct: 621 VHILVPLIGRYDIFLRFMENFENMCLIPKQNVKLVIILFSRDSGQDSSKHIELIKGYQNK 680
Query: 316 TSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNT 375
KA T I + GEFSRG GL++ + + ++ LL FCDVD+ F +FL CR NT
Sbjct: 681 YPKA----EMTLIPMKGEFSRGLGLEMASAQFD-NDTLLLFCDVDLIFREDFLQRCRDNT 735
Query: 376 QPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFIN 435
G++V+YP++FSQY+P + G + PP + + K+TGFWRD+G+G+TC Y+SD +
Sbjct: 736 IQGQQVYYPIIFSQYDPKVTNGGN---PPTDDYFIFSKKTGFWRDYGYGITCIYKSDLLG 792
Query: 436 IGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCMDELTPEQYKMCMQ 495
GGFD I+GWG EDV LY K + S L R+ G+ H++H C L P+QYKMC+
Sbjct: 793 AGGFDTSIQGWGLEDVDLYNKVILSGLRPFRSQEVGVVHIFHPVHCDPNLDPKQYKMCLG 852
Query: 496 SKAMNEASHGQLGMLVFRHEIEAHLRKQKQKTSS 529
SKA AS QL L +E HL + +T S
Sbjct: 853 SKASTFASTMQLAEL----WLEKHLGVRYNRTLS 882
>gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
Length = 802
Score = 194 bits (493), Expect = 2e-49
Identities = 107/297 (36%), Positives = 170/297 (57%), Gaps = 19/297 (6%)
Query: 215 RTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVD 274
R ++ G+L L+ + K+L+ F+ G K+E + IN+++PL+ R D
Sbjct: 496 RINQESGSLSFLS------NSLKKLVPFQLPGS----KSEHKEPKDKKINILIPLSGRFD 545
Query: 275 KFRQFMQNFREMCIEQDGRVHLTVVYFGKE----EINEVKGILENTSKAANFRNFTFIQL 330
F +FM NF + C+ + V L V+ F + + +V+ + + K + + +
Sbjct: 546 MFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPK-ADMQILPV 604
Query: 331 NGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQY 390
+GEFSR L+VG+ + + LLFFCDVD+ FT+EFL CR NT G+++++P++FSQY
Sbjct: 605 SGEFSRALALEVGSSQFNNES-LLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQY 663
Query: 391 NPGIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIKGWGGED 450
+P I+Y P + ++TGFWR++GFG+TC Y+ D + +GGFD+ I+GWG ED
Sbjct: 664 DPKIVYS---GKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLED 720
Query: 451 VHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCMDELTPEQYKMCMQSKAMNEASHGQL 507
V L+ K + + L R+ G+ H+ H C L P+QYKMC+ SKA S QL
Sbjct: 721 VDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQL 777
>gi|239757870 PREDICTED: novel protein similar to chondroitin
sulfate GalNAcT-2 (GALNACT-2) [Homo sapiens]
Length = 142
Score = 154 bits (388), Expect = 3e-37
Identities = 68/93 (73%), Positives = 79/93 (84%)
Query: 438 GFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCMDELTPEQYKMCMQSK 497
GFD+++KGWGGEDVHLYRKYL +LIV+R PV GLFHLWHEK C DELTPEQY+MC+QSK
Sbjct: 47 GFDMEVKGWGGEDVHLYRKYLRGDLIVIRNPVPGLFHLWHEKHCADELTPEQYRMCIQSK 106
Query: 498 AMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSK 530
AM+EAS LGMLVFR EIE HL KQ +T+S+
Sbjct: 107 AMDEASRSHLGMLVFREEIETHLHKQAYRTNSE 139
>gi|239752388 PREDICTED: novel protein similar to chondroitin
sulfate GalNAcT-2 (GALNACT-2) [Homo sapiens]
Length = 142
Score = 154 bits (388), Expect = 3e-37
Identities = 68/93 (73%), Positives = 79/93 (84%)
Query: 438 GFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCMDELTPEQYKMCMQSK 497
GFD+++KGWGGEDVHLYRKYL +LIV+R PV GLFHLWHEK C DELTPEQY+MC+QSK
Sbjct: 47 GFDMEVKGWGGEDVHLYRKYLRGDLIVIRNPVPGLFHLWHEKHCADELTPEQYRMCIQSK 106
Query: 498 AMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSK 530
AM+EAS LGMLVFR EIE HL KQ +T+S+
Sbjct: 107 AMDEASRSHLGMLVFREEIETHLHKQAYRTNSE 139
>gi|239746905 PREDICTED: novel protein similar to chondroitin
sulfate GalNAcT-2 (GALNACT-2) [Homo sapiens]
Length = 142
Score = 154 bits (388), Expect = 3e-37
Identities = 68/93 (73%), Positives = 79/93 (84%)
Query: 438 GFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCMDELTPEQYKMCMQSK 497
GFD+++KGWGGEDVHLYRKYL +LIV+R PV GLFHLWHEK C DELTPEQY+MC+QSK
Sbjct: 47 GFDMEVKGWGGEDVHLYRKYLRGDLIVIRNPVPGLFHLWHEKHCADELTPEQYRMCIQSK 106
Query: 498 AMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSK 530
AM+EAS LGMLVFR EIE HL KQ +T+S+
Sbjct: 107 AMDEASRSHLGMLVFREEIETHLHKQAYRTNSE 139
>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase
3 [Homo sapiens]
Length = 998
Score = 91.3 bits (225), Expect = 2e-18
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 262 LINVIVPLAKRVDKFRQFMQNFREMC-IEQDGRVHLTVVYFGKEEINEVKGILENTSKAA 320
+++ +VP+ + +QF+++ + + D ++ + + E+++ +E K +
Sbjct: 787 VVHFVVPVKNQARWVQQFIKDMENLFQVTGDPHFNIVITDYSSEDMD-----VEMALKRS 841
Query: 321 NFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPGKK 380
R++ +++L+G F R GL G K + ++F CD+ I+F + ++ R + GK
Sbjct: 842 KLRSYQYVKLSGNFERSAGLQAGIDLVKDPHSIIFLCDLHIHFPAGVIDAIRKHCVEGKM 901
Query: 381 VFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFD 440
F P+ ++ H A P + G+W GFG+ Y+SD IGG +
Sbjct: 902 AFAPM--------VMRLHCGATPQWPE--------GYWEVNGFGLLGIYKSDLDRIGGMN 945
Query: 441 LD--IKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCM 482
WGGED L + L + L V R +R FH +H KR M
Sbjct: 946 TKEFRDRWGGEDWELLDRILQAGLDVERLSLRNFFHHFHSKRGM 989
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase 4
[Homo sapiens]
Length = 1039
Score = 85.1 bits (209), Expect = 1e-16
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 260 NTLINVIVPLAKRVDKFRQFMQNFREMCIEQ-DGRVHLTVVYFGKEEINEVKGILENTSK 318
+ +++ IVP+ + QF+ + + D R + +V F E+++ +E +
Sbjct: 821 DVMVHFIVPVKNQARWVAQFLADMAALHARTGDSRFSVVLVDFESEDMD-----VERALR 875
Query: 319 AANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPG 378
AA + +++ G F R GL G + ++ ++F CD+ I+F L+ R + G
Sbjct: 876 AARLPRYQYLRRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEG 935
Query: 379 KKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGG 438
+ F PV+ + G P G+W GFG+ Y+SDF +GG
Sbjct: 936 RLAFAPVVMR-----LSCGSSPRDP-----------HGYWEVNGFGLFGIYKSDFDRVGG 979
Query: 439 FDLD--IKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCM 482
+ + WGGED L + L + L V R +R +H +H KR M
Sbjct: 980 MNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYHSKRGM 1025
>gi|27545323 chondroitin polymerizing factor [Homo sapiens]
Length = 775
Score = 60.5 bits (145), Expect = 4e-09
Identities = 91/401 (22%), Positives = 156/401 (38%), Gaps = 41/401 (10%)
Query: 140 ATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELVEAIESALETLNSPAENSP 199
A+ + + +D FT Q + G R P +R R ++ + + +ALE LN P
Sbjct: 386 ASRFEVLRWDYFTEQHAFSCADGSPRCP----LRGADRADVADVLGTALEELNR--RYHP 439
Query: 200 NHRPYTASDFIEGIYRTERDKGTLYEL-------TFKGDHKHEFKRLILFRPFGPIMKVK 252
R + G R + +G Y L T +G + +R+ L RP + +
Sbjct: 440 ALR-LQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILP 498
Query: 253 NEKLNMANTLINVIVPLAKRV-DKFRQFMQNFREMCIEQ-DGRVHLTVVYFGK------- 303
+ A+ L V++PLA D F++ F +E D LT++ +
Sbjct: 499 VPYVTEASRL-TVLLPLAAAERDLAPGFLEAFATAALEPGDAAAALTLLLLYEPRQAQRV 557
Query: 304 ---EEINEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGS--NVLLFFCD 358
+ VK + + F L+ + + L + K + L
Sbjct: 558 AHADVFAPVKAHVAELER--RFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAG 615
Query: 359 VDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFW 418
D T +FLN CR++ G + F+P+ F ++P + P L ++TG +
Sbjct: 616 PDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPPEL------GRDTGRF 669
Query: 419 RDFGFGMTCQYRSDFINIGG---FDLDIKGWGGEDVHLYRKYLH-SNLIVVRTPVRGLFH 474
C Y SD++ G + + E + +Y +LH S+L V+R L
Sbjct: 670 DRQAASEACFYNSDYVAARGRLAAASEQEEELLESLDVYELFLHFSSLHVLRAVEPALLQ 729
Query: 475 LWHEKRCMDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHE 515
+ + C L+ + Y C+QS S QL ML+F E
Sbjct: 730 RYRAQTCSARLSEDLYHRCLQSVLEGLGSRTQLAMLLFEQE 770
>gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens]
Length = 772
Score = 48.9 bits (115), Expect = 1e-05
Identities = 87/410 (21%), Positives = 149/410 (36%), Gaps = 45/410 (10%)
Query: 141 TEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELVEAIESALETLNSPAENSPN 200
+ + + +D FT Q + G + P + R D D A+E+ALE LN + P
Sbjct: 368 SRFEVLGWDYFTEQHTFSCADGAPKCPLQGASRADVGD----ALETALEQLNRRYQ--PR 421
Query: 201 HRPYTASDFIEGIYRTERDKGTLYEL-------TFKGDHKHEFKRLILFRPFGPIMKVKN 253
R + + G R + +G Y L T +G + +R+ L RP + +
Sbjct: 422 LR-FQKQRLLNGYRRFDPARGMEYTLDLLLECVTQRGHRRALARRVSLLRPLSRVEILPM 480
Query: 254 EKLNMANTLINVIVPLAKRVDKFRQFMQNFREMCIEQDGRVHLTVVY-FGKEEINE---- 308
+ A + V+ L F++ F +E LT++ +G E
Sbjct: 481 PYVTEATRVQLVLPLLVAEAAAAPAFLEAFAANVLEPREHALLTLLLVYGPREGGRGAPD 540
Query: 309 ----VKGILENTSKAANFRNFTFIQLNGEF-SRGKGLDVGARFWKGSNVLLFFCDVDIYF 363
VK + ++ + E S+ + +DV ++ + L F V
Sbjct: 541 PFLGVKAAAAELERRYPGTRLAWLAVRAEAPSQVRLMDVVSKKHP-VDTLFFLTTVWTRP 599
Query: 364 TSEFLNTCRLNTQPGKKVFYPVLFSQYNPGII----------YGHHDAVPPLEQQLVIKK 413
E LN CR+N G + F+PV F ++NP + G PP
Sbjct: 600 GPEVLNRCRMNAISGWQAFFPVHFQEFNPALSPQRSPPGPPGAGPDPPSPPGADPSRGAP 659
Query: 414 ETGFWRDFGFGMTCQYRSDFI--------NIGGFDLDIKGWGGEDVHLYRKYLHSNLIVV 465
G + C Y +D++ + G + + G E + ++ ++ S L +
Sbjct: 660 IGGRFDRQASAEGCFYNADYLAARARLAGELAGQEEEEALEGLEVMDVFLRF--SGLHLF 717
Query: 466 RTPVRGLFHLWHEKRCMDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHE 515
R GL + + C L+ E Y C S QL M +F E
Sbjct: 718 RAVEPGLVQKFSLRDCSPRLSEELYHRCRLSNLEGLGGRAQLAMALFEQE 767
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 36.6 bits (83), Expect = 0.059
Identities = 46/210 (21%), Positives = 80/210 (38%), Gaps = 22/210 (10%)
Query: 14 RVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVS 73
R+ ++ LC LYM P E Q +A ++ + + E E++ R
Sbjct: 275 RINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQMERAMLENEKKKREMAE 334
Query: 74 SLKRQIAQLKEELQER----SEQLRNGQYQASDAAGLGLDRSPPEK---TQADLLAFLHS 126
K +I + KEEL ER EQ + Q + + L+ K ++A+ LA
Sbjct: 335 KEKEKIEREKEELMERLKQIEEQTKKAQQELEEQTRRALELEQERKRAQSEAEKLAKERQ 394
Query: 127 QVDKA-----EVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELV 181
+ ++A + + K E A+ T ++ QLE + E + K +
Sbjct: 395 EAEEAKEALLQASRDQKKTQEQLALEMAELT-ARISQLEMARQKKESEAVEWQQKAQMVQ 453
Query: 182 EAIESALETLNS---------PAENSPNHR 202
E +E L + PAEN + +
Sbjct: 454 EDLEKTRAELKTAMSTPHVAEPAENEQDEQ 483
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 35.0 bits (79), Expect = 0.17
Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 19/168 (11%)
Query: 40 EEQLALPRANSPTGKE-----GYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLR 94
E ++ L + N+ KE G LQ+ E + + + K Q+ +LKEE +E+++ +
Sbjct: 836 EMKMNLEKQNAELRKERQDADGQMKELQDQLEAEQYFSTLYKTQVRELKEECEEKTKLGK 895
Query: 95 NGQYQASDAAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQ 154
Q + + + + L A L + KA+ + E + +
Sbjct: 896 ELQQKKQEL----------QDERDSLAAQLEITLTKADSEQLARSIAEEQYSDLEKEKIM 945
Query: 155 KVYQLETGLTRHPEEKPVRKDKRDELVEAIESALETLNSPAENSPNHR 202
K +++ + RH +E ++D + ++E TL S N N +
Sbjct: 946 KELEIKEMMARHKQE----LTEKDATIASLEETNRTLTSDVANLANEK 989
>gi|161702986 ezrin [Homo sapiens]
Length = 586
Score = 34.7 bits (78), Expect = 0.22
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 24/247 (9%)
Query: 14 RVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVS 73
R+ ++ LC LYM P E Q +A ++ + E E++ R V
Sbjct: 275 RINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVE 334
Query: 74 SLKRQIAQLKEE----LQERSEQLRNGQYQASDAAGLGLD--------RSPPEKTQADLL 121
K Q+ + KEE LQ+ E+ + + + S+ L + E+ +AD +
Sbjct: 335 REKEQMMREKEELMLRLQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRM 394
Query: 122 AFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEE----KPVRKDKR 177
A L ++ + + E A +T K+ LE R +E + K+ +
Sbjct: 395 AALRAKEELERQAVDQIKSQEQLAAELAEYT-AKIALLEEARRRKEDEVEEWQHRAKEAQ 453
Query: 178 DELVEAIESALETLNSPAENSPN-HRPYTASDFIEGIYRTERDKGTLY--ELTFKG--DH 232
D+LV+ E + +P P + P S ++ + E + T Y EL+ +G D
Sbjct: 454 DDLVKTKEELHLVMTAPPPPPPPVYEP--VSYHVQESLQDEGAEPTGYSAELSSEGIRDD 511
Query: 233 KHEFKRL 239
++E KR+
Sbjct: 512 RNEEKRI 518
>gi|21614499 ezrin [Homo sapiens]
Length = 586
Score = 34.7 bits (78), Expect = 0.22
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 24/247 (9%)
Query: 14 RVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVS 73
R+ ++ LC LYM P E Q +A ++ + E E++ R V
Sbjct: 275 RINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVE 334
Query: 74 SLKRQIAQLKEE----LQERSEQLRNGQYQASDAAGLGLD--------RSPPEKTQADLL 121
K Q+ + KEE LQ+ E+ + + + S+ L + E+ +AD +
Sbjct: 335 REKEQMMREKEELMLRLQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRM 394
Query: 122 AFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEE----KPVRKDKR 177
A L ++ + + E A +T K+ LE R +E + K+ +
Sbjct: 395 AALRAKEELERQAVDQIKSQEQLAAELAEYT-AKIALLEEARRRKEDEVEEWQHRAKEAQ 453
Query: 178 DELVEAIESALETLNSPAENSPN-HRPYTASDFIEGIYRTERDKGTLY--ELTFKG--DH 232
D+LV+ E + +P P + P S ++ + E + T Y EL+ +G D
Sbjct: 454 DDLVKTKEELHLVMTAPPPPPPPVYEP--VSYHVQESLQDEGAEPTGYSAELSSEGIRDD 511
Query: 233 KHEFKRL 239
++E KR+
Sbjct: 512 RNEEKRI 518
>gi|253735778 Rho/Rac guanine nucleotide exchange factor 2 isoform 2
[Homo sapiens]
Length = 985
Score = 34.7 bits (78), Expect = 0.22
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 31 MLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERS 90
M A P+G E + L RANS G+ G E+ ++ L+RQ A L+EEL+
Sbjct: 762 MEARFPEGPERREKLCRANSRDGEAGRAGAAPVAPEKQATELALLQRQHALLQEELRRCR 821
Query: 91 EQLRNGQYQASDAAGLGLDRSPPEKTQA 118
R G+ +A++A L E+ +A
Sbjct: 822 ---RLGEERATEAGSLEARLRESEQARA 846
>gi|253735775 Rho/Rac guanine nucleotide exchange factor 2 isoform 1
[Homo sapiens]
Length = 986
Score = 34.7 bits (78), Expect = 0.22
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 31 MLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERS 90
M A P+G E + L RANS G+ G E+ ++ L+RQ A L+EEL+
Sbjct: 763 MEARFPEGPERREKLCRANSRDGEAGRAGAAPVAPEKQATELALLQRQHALLQEELRRCR 822
Query: 91 EQLRNGQYQASDAAGLGLDRSPPEKTQA 118
R G+ +A++A L E+ +A
Sbjct: 823 ---RLGEERATEAGSLEARLRESEQARA 847
>gi|15011974 Rho/Rac guanine nucleotide exchange factor 2 isooform 3
[Homo sapiens]
Length = 958
Score = 34.7 bits (78), Expect = 0.22
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 31 MLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERS 90
M A P+G E + L RANS G+ G E+ ++ L+RQ A L+EEL+
Sbjct: 735 MEARFPEGPERREKLCRANSRDGEAGRAGAAPVAPEKQATELALLQRQHALLQEELRRCR 794
Query: 91 EQLRNGQYQASDAAGLGLDRSPPEKTQA 118
R G+ +A++A L E+ +A
Sbjct: 795 ---RLGEERATEAGSLEARLRESEQARA 819
>gi|53759113 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
[Homo sapiens]
Length = 372
Score = 34.3 bits (77), Expect = 0.29
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 424 GMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVR-GLFH-LWHEKRC 481
G++ ++ F+ I GF + GWGGED ++ + + + + R +R G + + H++
Sbjct: 256 GVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDIRIGRYRMIKHDRDK 315
Query: 482 MDELTPEQYKMCMQSK 497
+E P+++ +K
Sbjct: 316 HNEPNPQRFTKIQNTK 331
>gi|4502347 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
[Homo sapiens]
Length = 372
Score = 34.3 bits (77), Expect = 0.29
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 424 GMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVR-GLFH-LWHEKRC 481
G++ ++ F+ I GF + GWGGED ++ + + + + R +R G + + H++
Sbjct: 256 GVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDIRIGRYRMIKHDRDK 315
Query: 482 MDELTPEQYKMCMQSK 497
+E P+++ +K
Sbjct: 316 HNEPNPQRFTKIQNTK 331
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 33.5 bits (75), Expect = 0.50
Identities = 30/144 (20%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 53 GKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERS-------EQLRNGQYQASDAAG 105
G EG LQ+ E + + + K Q+ +LKEE++E++ ++L+N + +
Sbjct: 834 GNEGQMRELQDQLEAEQYFSTLYKTQVKELKEEIEEKNRENLKKIQELQNEKETLATQLD 893
Query: 106 LGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTR 165
L ++ E+ LL + ++ + A + E + T+ ++ + + LT+
Sbjct: 894 LAETKAESEQLARGLLEEQYFELTQESKKAASRNRQE---ITDKDHTVSRLEEANSMLTK 950
Query: 166 HPEEKPVRKDKRDELVEAIESALE 189
E + + + +EL E ++ A E
Sbjct: 951 DIE---ILRRENEELTEKMKKAEE 971
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 33.5 bits (75), Expect = 0.50
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 55 EGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQ-YQASDAAGLGLDRSPP 113
E Y+ +L E +E H + L +I +LK E+ + L N Q S L R+
Sbjct: 1352 EEYRKLLSE-KEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEK 1410
Query: 114 EKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQ--KVYQLETGLTRHPEEKP 171
E Q DL A + +K + VK ++ Q KV + + +E+
Sbjct: 1411 ETIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQH 1470
Query: 172 VRKDKRDELVEAI---ESALETLNSPAEN 197
V + EL E + E+ ++L S EN
Sbjct: 1471 VSVQEMQELKETLNQAETKSKSLESQVEN 1499
Score = 30.8 bits (68), Expect = 3.2
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 8/182 (4%)
Query: 83 KEELQERSEQLRNGQYQASDAAG-LGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLAT 141
KE++ + QLR + Q +D L S E+ QA + + S + +V V+
Sbjct: 931 KEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNI 990
Query: 142 EYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELVEAIESALETLN---SPAENS 198
E F Q LE L +EK +D + +E++E L L S +N
Sbjct: 991 EVRLKESAEFQTQ----LEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNE 1046
Query: 199 PNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNM 258
AS + + RD ++ + +K+E + ++ + K + M
Sbjct: 1047 VQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKM 1106
Query: 259 AN 260
A+
Sbjct: 1107 AS 1108
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 33.5 bits (75), Expect = 0.50
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 25/137 (18%)
Query: 53 GKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASDAAGLGLDRSP 112
GK+ A L+ E + L++ + QLKE+L ++ ++ +G S+AAG R+
Sbjct: 1061 GKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAG----RTE 1116
Query: 113 PEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPV 172
P + L L ++V K E QK + L R E +
Sbjct: 1117 PTGPK---LEALRAEVSKLEQQC------------------QKQQEQADSLERSLEAERA 1155
Query: 173 RKDKRDELVEAIESALE 189
+ +RD +E ++ LE
Sbjct: 1156 SRAERDSALETLQGQLE 1172
>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
sapiens]
Length = 1551
Score = 33.5 bits (75), Expect = 0.50
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 55 EGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQ--YQASDAAGLGLDRSP 112
E +A +E E Q VSSL RQ+ QL+ + ++R E+ + + AS+ G+G
Sbjct: 548 EEARAAQRELEAQ----VSSLSRQVTQLQGQWEQRLEESSQAKTIHTASETNGMGPPEGG 603
Query: 113 PEKTQ-ADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQ-LETGLTRHPEEK 170
P++ Q +A L Q+++A + + ++ L + + LE L + E K
Sbjct: 604 PQEAQLRKEVAALREQLEQAHSHRPSGKEEALCQLQEENRRLSREQERLEAELAQEQESK 663
Query: 171 PVRKDKRDELVEAIESALETLNSPAENSPNHRPY 204
+ +R E E+ L + S + R Y
Sbjct: 664 QRLEGERRETESNWEAQLADILSWVNDEKVSRGY 697
>gi|45439327 periplakin [Homo sapiens]
Length = 1756
Score = 33.5 bits (75), Expect = 0.50
Identities = 40/201 (19%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 45 LPRANSPTGKEGYQAVLQEW-EEQHRNYVSSLKRQIAQLKEELQERSEQLRNG--QYQAS 101
L + P +E +Q + + EEQH+N + L+ ++ L+ +L+ ++ R+G +Y
Sbjct: 938 LKKVPDPVLEESFQQLQRTLAEEQHKNQL--LQEELEALQLQLRALEQETRDGGQEYVVK 995
Query: 102 DAAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLA------------TEYAAVPFD 149
+ R P++ QAD + L +++ G + A E + +
Sbjct: 996 EVL-----RIEPDRAQADEVLQLREELEALRRQKGAREAEVLLLQQRVAALAEEKSRAQE 1050
Query: 150 SFTLQKVYQLETGLTRHPEEKPVRKD--KRDELVEAIESALETLNSPAENSPNHRPYTAS 207
T ++V +L+ E + +++D ++D+L E E L L + R
Sbjct: 1051 KVTEKEVVKLQNDPQLEAEYQQLQEDHQRQDQLREKQEEELSFLQDKLKRLEKERAMAEG 1110
Query: 208 DF-IEGIYRTERDKGTLYELT 227
++ + + E+D T E++
Sbjct: 1111 KITVKEVLKVEKDAATEREVS 1131
>gi|225637489 hypothetical protein LOC54777 [Homo sapiens]
Length = 2441
Score = 33.1 bits (74), Expect = 0.65
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 78 QIAQLKEELQERSEQLRNGQYQASDAAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGV 137
QI + ++ L+ +E LR D+ GL DR T+ L L+ ++AE A +
Sbjct: 160 QIEEDEDRLEPATEHLRKAA--RLDSLGLYRDRIQMASTRLRLCTTLYQAPERAEDKAIM 217
Query: 138 KLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDE 179
+ A P DS ++ + GL P+ + D +E
Sbjct: 218 AVEQAKKATPKDSVRKKRALLVNAGLALAPDAFQIVLDSENE 259
>gi|61658642 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 33.1 bits (74), Expect = 0.65
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 15/60 (25%)
Query: 7 GLLAWISRVVVLLV-----------LLCCAISVLYMLAC----TPKGDEEQLALPRANSP 51
G+LAW+ VV LV CC++S L+M + P+GD+E+L + + P
Sbjct: 125 GVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEP 184
>gi|61658640 interleukin 32 isoform D [Homo sapiens]
Length = 179
Score = 33.1 bits (74), Expect = 0.65
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 15/60 (25%)
Query: 7 GLLAWISRVVVLLV-----------LLCCAISVLYMLAC----TPKGDEEQLALPRANSP 51
G+LAW+ VV LV CC++S L+M + P+GD+E+L + + P
Sbjct: 116 GVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEP 175
>gi|61658638 interleukin 32 isoform C [Homo sapiens]
Length = 168
Score = 33.1 bits (74), Expect = 0.65
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 15/60 (25%)
Query: 7 GLLAWISRVVVLLV-----------LLCCAISVLYMLAC----TPKGDEEQLALPRANSP 51
G+LAW+ VV LV CC++S L+M + P+GD+E+L + + P
Sbjct: 105 GVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEP 164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,982,031
Number of Sequences: 37866
Number of extensions: 903050
Number of successful extensions: 3492
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 3367
Number of HSP's gapped (non-prelim): 200
length of query: 532
length of database: 18,247,518
effective HSP length: 107
effective length of query: 425
effective length of database: 14,195,856
effective search space: 6033238800
effective search space used: 6033238800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.