Search of human proteins with 194353995

Search of human proteins with 194353995

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|194353995 apolipoprotein L domain containing 1 isoform 1
[Homo sapiens]
         (279 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|194353995 apolipoprotein L domain containing 1 isoform 1 [Hom...   549   e-157
gi|194353993 apolipoprotein L domain containing 1 isoform 2 [Hom...   478   e-135
gi|13449281 apolipoprotein L6 [Homo sapiens]                           58   1e-08
gi|22035646 apolipoprotein L3 isoform 1 [Homo sapiens]                 55   5e-08
gi|19923626 apolipoprotein L4 isoform 1 [Homo sapiens]                 54   2e-07
gi|22035657 apolipoprotein L4 isoform 2 precursor [Homo sapiens]       54   2e-07
gi|13562090 apolipoprotein L2 [Homo sapiens]                           50   2e-06
gi|22035653 apolipoprotein L2 [Homo sapiens]                           50   2e-06
gi|211938442 apolipoprotein L1 isoform c precursor [Homo sapiens]      46   3e-05
gi|211938440 apolipoprotein L1 isoform a precursor [Homo sapiens]      46   3e-05
gi|21735616 apolipoprotein L1 isoform b precursor [Homo sapiens]       46   3e-05
gi|21735614 apolipoprotein L1 isoform a precursor [Homo sapiens]       46   3e-05
gi|13470094 apolipoprotein L5 [Homo sapiens]                           42   6e-04
gi|22035650 apolipoprotein L3 isoform 3 [Homo sapiens]                 36   0.033
gi|22035648 apolipoprotein L3 isoform 3 [Homo sapiens]                 36   0.033
gi|13446229 mesoderm development candidate 1 [Homo sapiens]            34   0.16 
gi|42516561 ubiquitin specific protease 33 isoform 3 [Homo sapiens]    30   2.3  
gi|42516567 ubiquitin specific protease 33 isoform 1 [Homo sapiens]    30   2.3  
gi|42516565 ubiquitin specific protease 33 isoform 2 [Homo sapiens]    30   2.3  
gi|46195755 SCAN domain containing 3 [Homo sapiens]                    30   3.1  
gi|157041224 SH2 domain containing 5 isoform 2 [Homo sapiens]          29   4.0  
gi|156938287 SH2 domain containing 5 isoform 1 [Homo sapiens]          29   4.0  
gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo sa...    29   5.2  
gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo s...    29   5.2  
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s...    29   5.2  
gi|13129128 hypothetical protein LOC79095 [Homo sapiens]               29   5.2  
gi|169173396 PREDICTED: hypothetical protein [Homo sapiens]            28   6.8  
gi|169172588 PREDICTED: hypothetical protein [Homo sapiens]            28   6.8  
gi|169172986 PREDICTED: hypothetical protein [Homo sapiens]            28   6.8  
gi|116089276 tetratricopeptide repeat domain 23-like [Homo sapiens]    28   8.9  

>gi|194353995 apolipoprotein L domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 279

 Score =  549 bits (1415), Expect = e-157
 Identities = 279/279 (100%), Positives = 279/279 (100%)

Query: 1   MFRAPCHRLRARGTRKARAGAWRGCTFPCLGKGMERPAAREPHGPDALRRFQGLLLDRRG 60
           MFRAPCHRLRARGTRKARAGAWRGCTFPCLGKGMERPAAREPHGPDALRRFQGLLLDRRG
Sbjct: 1   MFRAPCHRLRARGTRKARAGAWRGCTFPCLGKGMERPAAREPHGPDALRRFQGLLLDRRG 60

Query: 61  RLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSA 120
           RLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSA
Sbjct: 61  RLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSA 120

Query: 121 VGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQDQMREILSCLEFFCRWQGCGD 180
           VGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQDQMREILSCLEFFCRWQGCGD
Sbjct: 121 VGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQDQMREILSCLEFFCRWQGCGD 180

Query: 181 RQLLQCGRNASIALYNSVYFIVFFGSRGFLIPRRAEGDTKVSQAVLKAKIQKLAESLESC 240
           RQLLQCGRNASIALYNSVYFIVFFGSRGFLIPRRAEGDTKVSQAVLKAKIQKLAESLESC
Sbjct: 181 RQLLQCGRNASIALYNSVYFIVFFGSRGFLIPRRAEGDTKVSQAVLKAKIQKLAESLESC 240

Query: 241 TGALDELSEQLESRVQLCTKSSRGHDLKISADQRAGLFF 279
           TGALDELSEQLESRVQLCTKSSRGHDLKISADQRAGLFF
Sbjct: 241 TGALDELSEQLESRVQLCTKSSRGHDLKISADQRAGLFF 279


>gi|194353993 apolipoprotein L domain containing 1 isoform 2 [Homo
           sapiens]
          Length = 248

 Score =  478 bits (1231), Expect = e-135
 Identities = 247/247 (100%), Positives = 247/247 (100%)

Query: 33  GMERPAAREPHGPDALRRFQGLLLDRRGRLHGQVLRLREVARRLERLRRRSLVANVAGSS 92
           GMERPAAREPHGPDALRRFQGLLLDRRGRLHGQVLRLREVARRLERLRRRSLVANVAGSS
Sbjct: 2   GMERPAAREPHGPDALRRFQGLLLDRRGRLHGQVLRLREVARRLERLRRRSLVANVAGSS 61

Query: 93  LSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITSDLSLIFCNSRELRRVQ 152
           LSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITSDLSLIFCNSRELRRVQ
Sbjct: 62  LSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITSDLSLIFCNSRELRRVQ 121

Query: 153 EIAATCQDQMREILSCLEFFCRWQGCGDRQLLQCGRNASIALYNSVYFIVFFGSRGFLIP 212
           EIAATCQDQMREILSCLEFFCRWQGCGDRQLLQCGRNASIALYNSVYFIVFFGSRGFLIP
Sbjct: 122 EIAATCQDQMREILSCLEFFCRWQGCGDRQLLQCGRNASIALYNSVYFIVFFGSRGFLIP 181

Query: 213 RRAEGDTKVSQAVLKAKIQKLAESLESCTGALDELSEQLESRVQLCTKSSRGHDLKISAD 272
           RRAEGDTKVSQAVLKAKIQKLAESLESCTGALDELSEQLESRVQLCTKSSRGHDLKISAD
Sbjct: 182 RRAEGDTKVSQAVLKAKIQKLAESLESCTGALDELSEQLESRVQLCTKSSRGHDLKISAD 241

Query: 273 QRAGLFF 279
           QRAGLFF
Sbjct: 242 QRAGLFF 248


>gi|13449281 apolipoprotein L6 [Homo sapiens]
          Length = 343

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 4/117 (3%)

Query: 48  LRRFQGLLLDRRGRLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSL 107
           LR F  L  D    L G + +LR +A  +++  ++   AN+  +S +    + +++GL+L
Sbjct: 43  LREFPRLKED----LKGNIDKLRALADDIDKTHKKFTKANMVATSTAVISGVMSLLGLAL 98

Query: 108 SPVTLGTSLLVSAVGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQDQMRE 164
           +P T G SLL+S  G G+ATA G  +I S       N     R ++I  T   + RE
Sbjct: 99  APATGGGSLLLSTAGQGLATAAGVTSIVSGTLERSKNKEAQARAEDILPTYDQEDRE 155


>gi|22035646 apolipoprotein L3 isoform 1 [Homo sapiens]
          Length = 402

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 29/103 (28%), Positives = 52/103 (50%)

Query: 61  RLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSA 120
           ++   + +LR +A  +E + R   ++NV  SS  A   + ++ GL L+P T GTSL ++A
Sbjct: 162 KIQESIEKLRALANGIEEVHRGCTISNVVSSSTGAASGIMSLAGLVLAPFTAGTSLALTA 221

Query: 121 VGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQDQMR 163
            G+G+  A     IT+ +      S        + AT  D+++
Sbjct: 222 AGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSIDRLK 264


>gi|19923626 apolipoprotein L4 isoform 1 [Homo sapiens]
          Length = 348

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 59  RGRLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLV 118
           R ++   + RLR +A  +E++ R  ++ANV   S   TG L +++G+ L+P T G SL +
Sbjct: 113 RWKIQESIERLRVIANEIEKVHRGCVIANVVSGS---TGIL-SVIGVMLAPFTAGLSLSI 168

Query: 119 SAVGLGVATAGGAVTITSDL-SLIFCNSRELRRVQEIAATCQDQMREILSCL 169
           +A G+G+  A     I S +    +  S EL     + AT  DQ+  +   L
Sbjct: 169 TAAGVGLGIASATAGIASSIVENTYTRSAEL-TASRLTATSTDQLEALRDIL 219


>gi|22035657 apolipoprotein L4 isoform 2 precursor [Homo sapiens]
          Length = 351

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 59  RGRLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLV 118
           R ++   + RLR +A  +E++ R  ++ANV   S   TG L +++G+ L+P T G SL +
Sbjct: 116 RWKIQESIERLRVIANEIEKVHRGCVIANVVSGS---TGIL-SVIGVMLAPFTAGLSLSI 171

Query: 119 SAVGLGVATAGGAVTITSDL-SLIFCNSRELRRVQEIAATCQDQMREILSCL 169
           +A G+G+  A     I S +    +  S EL     + AT  DQ+  +   L
Sbjct: 172 TAAGVGLGIASATAGIASSIVENTYTRSAEL-TASRLTATSTDQLEALRDIL 222


>gi|13562090 apolipoprotein L2 [Homo sapiens]
          Length = 337

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/74 (31%), Positives = 41/74 (55%)

Query: 62  LHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSAV 121
           L   + +LR +A  +E++ R + +ANV  +S+  T  +  ++GL L+P T G S ++   
Sbjct: 92  LEDHIRKLRALAEEVEQVHRGTTIANVVSNSVGTTSGILTLLGLGLAPFTEGISFVLLDT 151

Query: 122 GLGVATAGGAVTIT 135
           G+G+  A     IT
Sbjct: 152 GMGLGAAAAVAGIT 165


>gi|22035653 apolipoprotein L2 [Homo sapiens]
          Length = 337

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/74 (31%), Positives = 41/74 (55%)

Query: 62  LHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSAV 121
           L   + +LR +A  +E++ R + +ANV  +S+  T  +  ++GL L+P T G S ++   
Sbjct: 92  LEDHIRKLRALAEEVEQVHRGTTIANVVSNSVGTTSGILTLLGLGLAPFTEGISFVLLDT 151

Query: 122 GLGVATAGGAVTIT 135
           G+G+  A     IT
Sbjct: 152 GMGLGAAAAVAGIT 165


>gi|211938442 apolipoprotein L1 isoform c precursor [Homo sapiens]
          Length = 380

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/78 (29%), Positives = 42/78 (53%)

Query: 59  RGRLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLV 118
           +  L   + RLR +A  ++++ + + +ANV   SLS +  +  +VG+ L+P T G SL++
Sbjct: 130 KSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPFTEGGSLVL 189

Query: 119 SAVGLGVATAGGAVTITS 136
              G+ +        ITS
Sbjct: 190 LEPGMELGITAALTGITS 207


>gi|211938440 apolipoprotein L1 isoform a precursor [Homo sapiens]
          Length = 398

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/78 (29%), Positives = 42/78 (53%)

Query: 59  RGRLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLV 118
           +  L   + RLR +A  ++++ + + +ANV   SLS +  +  +VG+ L+P T G SL++
Sbjct: 148 KSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPFTEGGSLVL 207

Query: 119 SAVGLGVATAGGAVTITS 136
              G+ +        ITS
Sbjct: 208 LEPGMELGITAALTGITS 225


>gi|21735616 apolipoprotein L1 isoform b precursor [Homo sapiens]
          Length = 414

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/78 (29%), Positives = 42/78 (53%)

Query: 59  RGRLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLV 118
           +  L   + RLR +A  ++++ + + +ANV   SLS +  +  +VG+ L+P T G SL++
Sbjct: 164 KSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPFTEGGSLVL 223

Query: 119 SAVGLGVATAGGAVTITS 136
              G+ +        ITS
Sbjct: 224 LEPGMELGITAALTGITS 241


>gi|21735614 apolipoprotein L1 isoform a precursor [Homo sapiens]
          Length = 398

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/78 (29%), Positives = 42/78 (53%)

Query: 59  RGRLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLV 118
           +  L   + RLR +A  ++++ + + +ANV   SLS +  +  +VG+ L+P T G SL++
Sbjct: 148 KSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPFTEGGSLVL 207

Query: 119 SAVGLGVATAGGAVTITS 136
              G+ +        ITS
Sbjct: 208 LEPGMELGITAALTGITS 225


>gi|13470094 apolipoprotein L5 [Homo sapiens]
          Length = 433

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)

Query: 77  ERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITS 136
           E L + SLVA+ +G    A   +  I+GL+L+PVT G SL++SA G G+  A     I +
Sbjct: 132 ELLTKTSLVASSSG----AVSGVMNILGLALAPVTAGGSLMLSATGTGLGAAAAITNIVT 187

Query: 137 DL 138
           ++
Sbjct: 188 NV 189


>gi|22035650 apolipoprotein L3 isoform 3 [Homo sapiens]
          Length = 202

 Score = 36.2 bits (82), Expect = 0.033
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 101 AIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQD 160
           ++ GL L+P T GTSL ++A G+G+  A     IT+ +      S        + AT  D
Sbjct: 2   SLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSID 61

Query: 161 QMR 163
           +++
Sbjct: 62  RLK 64


>gi|22035648 apolipoprotein L3 isoform 3 [Homo sapiens]
          Length = 202

 Score = 36.2 bits (82), Expect = 0.033
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 101 AIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQD 160
           ++ GL L+P T GTSL ++A G+G+  A     IT+ +      S        + AT  D
Sbjct: 2   SLAGLVLAPFTAGTSLALTAAGVGLGAASAVTGITTSIVEHSYTSSAEAEASRLTATSID 61

Query: 161 QMR 163
           +++
Sbjct: 62  RLK 64


>gi|13446229 mesoderm development candidate 1 [Homo sapiens]
          Length = 362

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 98  ALAAIVGLSLSPVTLGTSLLVSAVGLGVATA--GGAVTITSDLSLIFCNSRELRRVQEIA 155
           A++A+VG +  P  LG +  VSA G  V TA  GGA+++ S   L+    R+L +  +  
Sbjct: 257 AVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGG 316

Query: 156 ATCQDQMREI 165
           A   D    +
Sbjct: 317 AKMSDHRERL 326


>gi|42516561 ubiquitin specific protease 33 isoform 3 [Homo sapiens]
          Length = 828

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 151 VQEIAATCQD---QMREILSCLEFFCRWQGCGDRQL 183
           +Q+   TCQD   Q   + +CLE  C + GCG+ Q+
Sbjct: 54  IQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQV 89


>gi|42516567 ubiquitin specific protease 33 isoform 1 [Homo sapiens]
          Length = 942

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 151 VQEIAATCQD---QMREILSCLEFFCRWQGCGDRQL 183
           +Q+   TCQD   Q   + +CLE  C + GCG+ Q+
Sbjct: 54  IQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQV 89


>gi|42516565 ubiquitin specific protease 33 isoform 2 [Homo sapiens]
          Length = 911

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 151 VQEIAATCQD---QMREILSCLEFFCRWQGCGDRQL 183
           +Q+   TCQD   Q   + +CLE  C + GCG+ Q+
Sbjct: 23  IQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQV 58


>gi|46195755 SCAN domain containing 3 [Homo sapiens]
          Length = 1325

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 21/88 (23%), Positives = 40/88 (45%)

Query: 85  VANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITSDLSLIFCN 144
           V+++  S+L A+  +A  V  S +P T+  +L+   +        G         +   N
Sbjct: 812 VSHINISALRASYKVALPVAKSKTPYTIAETLVKDCIKEVCLEMLGESAAKKVAQVPLSN 871

Query: 145 SRELRRVQEIAATCQDQMREILSCLEFF 172
               RR+QE+A   +DQ+ E +   ++F
Sbjct: 872 DTIARRIQELANDMEDQLIEQIKLAKYF 899


>gi|157041224 SH2 domain containing 5 isoform 2 [Homo sapiens]
          Length = 339

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 8   RLRARGTRKARAGAWRGCTFPC---LGKGMERPAARE--PHGPDALRRFQGLLLDRRGRL 62
           R +A  ++  R+GA+RGCT+     L      PAA E  P GP         L++  G L
Sbjct: 152 RKKAIRSKVIRSGAYRGCTYETQLQLSAREAFPAAWEAWPRGPGG----HSCLVESEGSL 207

Query: 63  HGQVLRLREVAR--RLERLRRRSLVANVAGSSLSATG 97
              +     ++R   L  LRR  L A +    L A+G
Sbjct: 208 TENIWAFAGISRPCALALLRRDVLGAFLLWPELGASG 244


>gi|156938287 SH2 domain containing 5 isoform 1 [Homo sapiens]
          Length = 423

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 8   RLRARGTRKARAGAWRGCTFPC---LGKGMERPAARE--PHGPDALRRFQGLLLDRRGRL 62
           R +A  ++  R+GA+RGCT+     L      PAA E  P GP         L++  G L
Sbjct: 236 RKKAIRSKVIRSGAYRGCTYETQLQLSAREAFPAAWEAWPRGPGG----HSCLVESEGSL 291

Query: 63  HGQVLRLREVAR--RLERLRRRSLVANVAGSSLSATG 97
              +     ++R   L  LRR  L A +    L A+G
Sbjct: 292 TENIWAFAGISRPCALALLRRDVLGAFLLWPELGASG 328


>gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo
           sapiens]
          Length = 395

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 218 DTKVSQAVLKAKIQKLAESLESCTGALDELSEQLESRVQLCTKSSRGHDLKI 269
           +TK     LK   Q+LA  LE  +  L +  +QLES  Q   K  +  ++++
Sbjct: 300 ETKAENTKLKLTNQELARELERTSWELQDAQQQLESLQQEACKLHQEKEMEV 351


>gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo
           sapiens]
          Length = 462

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 218 DTKVSQAVLKAKIQKLAESLESCTGALDELSEQLESRVQLCTKSSRGHDLKI 269
           +TK     LK   Q+LA  LE  +  L +  +QLES  Q   K  +  ++++
Sbjct: 300 ETKAENTKLKLTNQELARELERTSWELQDAQQQLESLQQEACKLHQEKEMEV 351


>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
           sapiens]
          Length = 731

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 218 DTKVSQAVLKAKIQKLAESLESCTGALDELSEQLESRVQLCTKSSRGHDLKI 269
           +TK     LK   Q+LA  LE  +  L +  +QLES  Q   K  +  ++++
Sbjct: 300 ETKAENTKLKLTNQELARELERTSWELQDAQQQLESLQQEACKLHQEKEMEV 351


>gi|13129128 hypothetical protein LOC79095 [Homo sapiens]
          Length = 83

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 205 GSRGFLIPRRAEGDTKVSQAVLKAKIQKLAESLESCTGALDELSEQLESRVQLCTKSSR 263
           G  G  +   AEG+         A I  + + + SC   L+E ++ L +R+Q   +S+R
Sbjct: 6   GDLGMPVEAGAEGEEDGFGEAEYAAINSMLDQINSCLDHLEEKNDHLHARLQELLESNR 64


>gi|169173396 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 93

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)

Query: 74  RRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVT 133
           R ++ LR R+LV      SLS    + +I+G+S+  +T  T +++S++ + + +   +++
Sbjct: 6   RDVKALRARALVLISIIISLSIIVTVISIIGISIISIT--TLIIISSINITIISI--SIS 61

Query: 134 ITSDLSLI 141
           I S +S I
Sbjct: 62  IISSISTI 69


>gi|169172588 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 93

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)

Query: 74  RRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVT 133
           R ++ LR R+LV      SLS    + +I+G+S+  +T  T +++S++ + + +   +++
Sbjct: 6   RDVKALRARALVLISIIISLSIIVTVISIIGISIISIT--TLIIISSINITIISI--SIS 61

Query: 134 ITSDLSLI 141
           I S +S I
Sbjct: 62  IISSISTI 69


>gi|169172986 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 93

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)

Query: 74  RRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTLGTSLLVSAVGLGVATAGGAVT 133
           R ++ LR R+LV      SLS    + +I+G+S+  +T  T +++S++ + + +   +++
Sbjct: 6   RDVKALRARALVLISIIISLSIIVTVISIIGISIISIT--TLIIISSINITIISI--SIS 61

Query: 134 ITSDLSLI 141
           I S +S I
Sbjct: 62  IISSISTI 69


>gi|116089276 tetratricopeptide repeat domain 23-like [Homo sapiens]
          Length = 361

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 12/123 (9%)

Query: 53  GLLLDRRGRLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAAIVGLSLSPVTL 112
           G ++  +G     ++ L E A ++E+LRR     N A   L    ++   +   +SP T 
Sbjct: 241 GDVIAAKGDRTSDLISLYEEAAQIEQLRRNH---NQAIQYLQQAHSVCVSLFTEVSPKTA 297

Query: 113 GTSLLVSAVGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQDQMREILSCLEFF 172
             S L++          G       + + F     +R +    AT   +  E LS  E F
Sbjct: 298 EMSALLAKA----YAMSGEAQHRDAVEIYF-----IRSINAYRATLGSEDFETLSTTEEF 348

Query: 173 CRW 175
           C+W
Sbjct: 349 CKW 351


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.137    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,341,356
Number of Sequences: 37866
Number of extensions: 375475
Number of successful extensions: 1909
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1885
Number of HSP's gapped (non-prelim): 30
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.