Guide to the Human Genome
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Name: SH2D5 Sequence: fasta or formatted (423aa) NCBI GI: 156938287
Description:

SH2 domain containing 5 isoform 1

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [339aa] SH2 domain containing 5 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         37           2
 C cysteine            4.0         17           1
 D aspartate           2.4         10           2
 E glutamate           6.9         29           2
 F phenylalanine       3.8         16           1
 G glycine             8.7         37           2
 H histidine           3.1         13           1
 I isoleucine          2.1          9           1
 K lysine              2.8         12           2
 L leucine            13.0         55           3
 M methionine          0.9          4           1
 N asparagine          1.7          7           1
 P proline             8.3         35           2
 Q glutamine           5.2         22           3
 R arginine            8.7         37           3
 S serine              7.3         31           3
 T threonine           2.8         12           1
 V valine              5.4         23           2
 W tryptophan          1.9          8           1
 Y tyrosine            2.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH2 domain containing 5 isoform 1 
SH2D5                 0.800   SH2 domain containing 5 isoform 2 
ANKS1A                0.023   ankyrin repeat and sterile alpha motif domain conta...
TNS1                  0.016   tensin 
SRMS                  0.015   src-related kinase lacking C-terminal regulatory tyr...
GRAP2                 0.014   GRB2-related adaptor protein 2 
ANKS1B                0.014   cajalin 2 isoform b 
ANKS1B                0.013   cajalin 2 isoform a 
ANKS1B                0.013   cajalin 2 isoform c 
GOLGA3                0.013   Golgi autoantigen, golgin subfamily a, 3 
GRB2                  0.009   growth factor receptor-bound protein 2 isoform 1 [Hom...
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
FAM43A                0.009   hypothetical protein LOC131583 
PTK6                  0.009   PTK6 protein tyrosine kinase 6 
SLA2                  0.009   Src-like-adaptor 2 isoform a 
GRAP                  0.008   GRB2-related adaptor protein 
ABL1                  0.007   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.007   c-abl oncogene 1, receptor tyrosine kinase isoform b...
TNS3                  0.007   tensin 3 
RERE                  0.007   atrophin-1 like protein isoform b 
RERE                  0.007   atrophin-1 like protein isoform a 
RERE                  0.007   atrophin-1 like protein isoform a 
SH2D1B                0.007   SH2 domain containing 1B 
SLA2                  0.007   Src-like-adaptor 2 isoform b 
ABL2                  0.007   arg tyrosine kinase isoform c 
ABL2                  0.007   arg tyrosine kinase isoform b 
ABL2                  0.007   arg tyrosine kinase isoform e 
ABL2                  0.007   arg tyrosine kinase isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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