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Search of human proteins with 194328738
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194328738 hypothetical protein LOC23247 [Homo sapiens]
(1618 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194328738 hypothetical protein LOC23247 [Homo sapiens] 3300 0.0
gi|6754638 microtubule-associated protein tau isoform 2 [Homo sa... 41 0.011
gi|178557736 microtubule-associated protein tau isoform 5 [Homo ... 41 0.011
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.014
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 40 0.024
gi|18379328 WW domain-containing adapter with a coiled-coil regi... 39 0.041
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 39 0.053
gi|150170670 piccolo isoform 2 [Homo sapiens] 39 0.053
gi|150378539 piccolo isoform 1 [Homo sapiens] 39 0.053
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 38 0.070
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 38 0.070
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens] 38 0.070
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens] 38 0.070
gi|24415404 MDN1, midasin homolog [Homo sapiens] 38 0.070
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 38 0.091
gi|18379332 WW domain-containing adapter with a coiled-coil regi... 38 0.091
gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 37 0.12
gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II, pol... 37 0.12
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 37 0.12
gi|119943102 CREB binding protein isoform b [Homo sapiens] 37 0.16
gi|119943104 CREB binding protein isoform a [Homo sapiens] 37 0.16
gi|54124343 hypothetical protein LOC387680 [Homo sapiens] 37 0.16
gi|154090959 hypothetical protein LOC55747 [Homo sapiens] 37 0.16
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 37 0.20
gi|82830424 gon-4-like isoform a [Homo sapiens] 37 0.20
gi|189011568 adenomatous polyposis coli [Homo sapiens] 36 0.26
gi|189011566 adenomatous polyposis coli [Homo sapiens] 36 0.26
gi|53759122 adenomatous polyposis coli [Homo sapiens] 36 0.26
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 36 0.26
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 36 0.26
>gi|194328738 hypothetical protein LOC23247 [Homo sapiens]
Length = 1618
Score = 3300 bits (8557), Expect = 0.0
Identities = 1618/1618 (100%), Positives = 1618/1618 (100%)
Query: 1 MDGQTLRKAERSWSCSREKKEGYAKDMVTDFDEKHDEYLILLQQRNRILKHLKSKDPVQL 60
MDGQTLRKAERSWSCSREKKEGYAKDMVTDFDEKHDEYLILLQQRNRILKHLKSKDPVQL
Sbjct: 1 MDGQTLRKAERSWSCSREKKEGYAKDMVTDFDEKHDEYLILLQQRNRILKHLKSKDPVQL 60
Query: 61 RLEHLEQGFSVYVNGANSELKSSPRKAIHSDFSRSASHTEGTHDYGRRTLFREAEEALRR 120
RLEHLEQGFSVYVNGANSELKSSPRKAIHSDFSRSASHTEGTHDYGRRTLFREAEEALRR
Sbjct: 61 RLEHLEQGFSVYVNGANSELKSSPRKAIHSDFSRSASHTEGTHDYGRRTLFREAEEALRR 120
Query: 121 SSRTAPSKVQRRGWHQKSVQIRTEAGPRLHIEPPVDYSDDFELCGDVTLQANNTSEDRPQ 180
SSRTAPSKVQRRGWHQKSVQIRTEAGPRLHIEPPVDYSDDFELCGDVTLQANNTSEDRPQ
Sbjct: 121 SSRTAPSKVQRRGWHQKSVQIRTEAGPRLHIEPPVDYSDDFELCGDVTLQANNTSEDRPQ 180
Query: 181 ELRRSLELSVNLQRKQKDCSSDEYDSIEEDILSEPEPEDPALVGHPRHDRPPSSGDWTQK 240
ELRRSLELSVNLQRKQKDCSSDEYDSIEEDILSEPEPEDPALVGHPRHDRPPSSGDWTQK
Sbjct: 181 ELRRSLELSVNLQRKQKDCSSDEYDSIEEDILSEPEPEDPALVGHPRHDRPPSSGDWTQK 240
Query: 241 DVHGEQETEGRSSPGPDTLVVLEFNPASKSHKRERNLSAKRKDNAEVFVPTKPEPNLTPQ 300
DVHGEQETEGRSSPGPDTLVVLEFNPASKSHKRERNLSAKRKDNAEVFVPTKPEPNLTPQ
Sbjct: 241 DVHGEQETEGRSSPGPDTLVVLEFNPASKSHKRERNLSAKRKDNAEVFVPTKPEPNLTPQ 300
Query: 301 APAVFPDQERMCSRPGSRRERPLSATRKTLCEAEYPEEDASAVLQAIQVENAALQRALLS 360
APAVFPDQERMCSRPGSRRERPLSATRKTLCEAEYPEEDASAVLQAIQVENAALQRALLS
Sbjct: 301 APAVFPDQERMCSRPGSRRERPLSATRKTLCEAEYPEEDASAVLQAIQVENAALQRALLS 360
Query: 361 RKAEQPASPLQDAEGPPAKPWTSLLEEKEETLELLPITTATTTQEPAGAAGGARAINQAM 420
RKAEQPASPLQDAEGPPAKPWTSLLEEKEETLELLPITTATTTQEPAGAAGGARAINQAM
Sbjct: 361 RKAEQPASPLQDAEGPPAKPWTSLLEEKEETLELLPITTATTTQEPAGAAGGARAINQAM 420
Query: 421 DRIGLLGSRQQQKLLKVLQAVESDSAHLGRVVSPTKEQVSDTEDKQRMRADEIKDAIYVT 480
DRIGLLGSRQQQKLLKVLQAVESDSAHLGRVVSPTKEQVSDTEDKQRMRADEIKDAIYVT
Sbjct: 421 DRIGLLGSRQQQKLLKVLQAVESDSAHLGRVVSPTKEQVSDTEDKQRMRADEIKDAIYVT 480
Query: 481 MEILSNWGNSWWVGLTEVEFFDLNDTKLYVSPHDVDIRNTATPGELGRLVNRNLAGKKDS 540
MEILSNWGNSWWVGLTEVEFFDLNDTKLYVSPHDVDIRNTATPGELGRLVNRNLAGKKDS
Sbjct: 481 MEILSNWGNSWWVGLTEVEFFDLNDTKLYVSPHDVDIRNTATPGELGRLVNRNLAGKKDS 540
Query: 541 SPWTCPFHPPLQLFFVIRNTRQLGDFHLAKIKVRNYWTADGDLDIGAKNVKLYVNRNLIF 600
SPWTCPFHPPLQLFFVIRNTRQLGDFHLAKIKVRNYWTADGDLDIGAKNVKLYVNRNLIF
Sbjct: 541 SPWTCPFHPPLQLFFVIRNTRQLGDFHLAKIKVRNYWTADGDLDIGAKNVKLYVNRNLIF 600
Query: 601 NGKLDKGDREAPADHSILVDQKNEKSEQLEEAMNAHSEESKGTHEMAGASGDKELGLGCS 660
NGKLDKGDREAPADHSILVDQKNEKSEQLEEAMNAHSEESKGTHEMAGASGDKELGLGCS
Sbjct: 601 NGKLDKGDREAPADHSILVDQKNEKSEQLEEAMNAHSEESKGTHEMAGASGDKELGLGCS 660
Query: 661 PPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGDMPSAPATSPP 720
PPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGDMPSAPATSPP
Sbjct: 661 PPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGDMPSAPATSPP 720
Query: 721 VKCPPVHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDRKQGGRKPKPLWLSPEK 780
VKCPPVHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDRKQGGRKPKPLWLSPEK
Sbjct: 721 VKCPPVHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDRKQGGRKPKPLWLSPEK 780
Query: 781 PLAWKGRLPSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKERPQRATTKVHSDDSDI 840
PLAWKGRLPSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKERPQRATTKVHSDDSDI
Sbjct: 781 PLAWKGRLPSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKERPQRATTKVHSDDSDI 840
Query: 841 FNQPPNRERPASGRRGSRKDAGSSSHGDDQPASREDTWSSRTPSRSRWRSEQEHTLHESW 900
FNQPPNRERPASGRRGSRKDAGSSSHGDDQPASREDTWSSRTPSRSRWRSEQEHTLHESW
Sbjct: 841 FNQPPNRERPASGRRGSRKDAGSSSHGDDQPASREDTWSSRTPSRSRWRSEQEHTLHESW 900
Query: 901 SSLSAFDRSHRGRISNTELPGDILDELLQQKSSRHSDLPPSKKGEQPGLSRGQDGYSGET 960
SSLSAFDRSHRGRISNTELPGDILDELLQQKSSRHSDLPPSKKGEQPGLSRGQDGYSGET
Sbjct: 901 SSLSAFDRSHRGRISNTELPGDILDELLQQKSSRHSDLPPSKKGEQPGLSRGQDGYSGET 960
Query: 961 DAGGDFKIPVLPYGQRLVIDIKSTWGDRHYVGLNGIEIFSSKGEPVQISNIKADPPDINI 1020
DAGGDFKIPVLPYGQRLVIDIKSTWGDRHYVGLNGIEIFSSKGEPVQISNIKADPPDINI
Sbjct: 961 DAGGDFKIPVLPYGQRLVIDIKSTWGDRHYVGLNGIEIFSSKGEPVQISNIKADPPDINI 1020
Query: 1021 LPAYGKDPRVVTNLIDGVNRTQDDMHVWLAPFTRGRSHSITIDFTHPCHVALIRIWNYNK 1080
LPAYGKDPRVVTNLIDGVNRTQDDMHVWLAPFTRGRSHSITIDFTHPCHVALIRIWNYNK
Sbjct: 1021 LPAYGKDPRVVTNLIDGVNRTQDDMHVWLAPFTRGRSHSITIDFTHPCHVALIRIWNYNK 1080
Query: 1081 SRIHSFRGVKDITMLLDTQCIFEGEIAKASGTLAGAPEHFGDTILFTTDDDILEAIFYSD 1140
SRIHSFRGVKDITMLLDTQCIFEGEIAKASGTLAGAPEHFGDTILFTTDDDILEAIFYSD
Sbjct: 1081 SRIHSFRGVKDITMLLDTQCIFEGEIAKASGTLAGAPEHFGDTILFTTDDDILEAIFYSD 1140
Query: 1141 EMFDLDVGSLDSLQDEEAMRRPSTADGEGDERPFTQAGLGADERIPELELPSSSPVPQVT 1200
EMFDLDVGSLDSLQDEEAMRRPSTADGEGDERPFTQAGLGADERIPELELPSSSPVPQVT
Sbjct: 1141 EMFDLDVGSLDSLQDEEAMRRPSTADGEGDERPFTQAGLGADERIPELELPSSSPVPQVT 1200
Query: 1201 TPEPGIYHGICLQLNFTASWGDLHYLGLTGLEVVGKEGQALPIHLHQISASPRDLNELPE 1260
TPEPGIYHGICLQLNFTASWGDLHYLGLTGLEVVGKEGQALPIHLHQISASPRDLNELPE
Sbjct: 1201 TPEPGIYHGICLQLNFTASWGDLHYLGLTGLEVVGKEGQALPIHLHQISASPRDLNELPE 1260
Query: 1261 YSDDSRALDKLIDGTNITMEDEHMWLIPFSPGLDHVVTIRLDRAESIAGLRFWNYNKSPE 1320
YSDDSRALDKLIDGTNITMEDEHMWLIPFSPGLDHVVTIRLDRAESIAGLRFWNYNKSPE
Sbjct: 1261 YSDDSRALDKLIDGTNITMEDEHMWLIPFSPGLDHVVTIRLDRAESIAGLRFWNYNKSPE 1320
Query: 1321 DTYRGAKIVHVSLDGLCVSPPEGFLIRKGPGNCHFDFAQEILFVDYLRAQLLPQPARRLD 1380
DTYRGAKIVHVSLDGLCVSPPEGFLIRKGPGNCHFDFAQEILFVDYLRAQLLPQPARRLD
Sbjct: 1321 DTYRGAKIVHVSLDGLCVSPPEGFLIRKGPGNCHFDFAQEILFVDYLRAQLLPQPARRLD 1380
Query: 1381 MRSLECASMDYEAPLMPCGFIFQFQLLTSWGDPYYIGLTGLELYDERGEKIPLSENNIAA 1440
MRSLECASMDYEAPLMPCGFIFQFQLLTSWGDPYYIGLTGLELYDERGEKIPLSENNIAA
Sbjct: 1381 MRSLECASMDYEAPLMPCGFIFQFQLLTSWGDPYYIGLTGLELYDERGEKIPLSENNIAA 1440
Query: 1441 FPDSVNSLEGVGGDVRTPDKLIDQVNDTSDGRHMWLAPILPGLVNRVYVIFDLPTTVSMI 1500
FPDSVNSLEGVGGDVRTPDKLIDQVNDTSDGRHMWLAPILPGLVNRVYVIFDLPTTVSMI
Sbjct: 1441 FPDSVNSLEGVGGDVRTPDKLIDQVNDTSDGRHMWLAPILPGLVNRVYVIFDLPTTVSMI 1500
Query: 1501 KLWNYAKTPHRGVKEFGLLVDDLLVYNGILAMVSHLVGGILPTCEPTVPYHTILFTEDRD 1560
KLWNYAKTPHRGVKEFGLLVDDLLVYNGILAMVSHLVGGILPTCEPTVPYHTILFTEDRD
Sbjct: 1501 KLWNYAKTPHRGVKEFGLLVDDLLVYNGILAMVSHLVGGILPTCEPTVPYHTILFTEDRD 1560
Query: 1561 IRHQEKHTTISNQAEDQDVQMMNENQIITNAKRKQSVVDPALRPKTCISEKETRRRRC 1618
IRHQEKHTTISNQAEDQDVQMMNENQIITNAKRKQSVVDPALRPKTCISEKETRRRRC
Sbjct: 1561 IRHQEKHTTISNQAEDQDVQMMNENQIITNAKRKQSVVDPALRPKTCISEKETRRRRC 1618
>gi|6754638 microtubule-associated protein tau isoform 2 [Homo
sapiens]
Length = 441
Score = 40.8 bits (94), Expect = 0.011
Identities = 64/279 (22%), Positives = 100/279 (35%), Gaps = 38/279 (13%)
Query: 580 DGDLDIGAKNVKLYVNRNLIFNGKLDKGD-----REAPADHSILVDQKNEKSEQLEEAMN 634
+GD D G K L +G + G + P + +E + + A
Sbjct: 36 EGDTDAGLKESPLQTPTE---DGSEEPGSETSDAKSTPTAEDVTAPLVDEGAPGKQAAAQ 92
Query: 635 AHSEESKGTHEMAGASGDKELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQ 694
H+E +GT +E G+G +P E A ++ Q + K K+ T
Sbjct: 93 PHTEIPEGTTA-------EEAGIGDTPSLEDEAAGHVT-QARMVSKSKDGTGSDDKKAKG 144
Query: 695 LEEYLRLS----AVPTSMGDMPSAPATSPPVKCPPVHEEPSLIQQLENLMGRKICEPPG- 749
+ +++ A P G A AT P K PP + P + R PG
Sbjct: 145 ADGKTKIATPRGAAPP--GQKGQANATRIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGS 202
Query: 750 --------KTPSWLQPSPTGKDRKQGGRKPKPLWLSPEKPLAWKGRLPSDDV--IGEGPG 799
+TPS P PT + +K + P S K +P D+ + G
Sbjct: 203 PGTPGSRSRTPSLPTP-PTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIG 261
Query: 800 ETEARDKGLRHEPGWGTSRSVNTKERPQRATTKVHSDDS 838
TE L+H+PG G + +N K +K S D+
Sbjct: 262 STE----NLKHQPGGGKVQIINKKLDLSNVQSKCGSKDN 296
>gi|178557736 microtubule-associated protein tau isoform 5 [Homo
sapiens]
Length = 412
Score = 40.8 bits (94), Expect = 0.011
Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 33/261 (12%)
Query: 602 GKLDKGDREAPADHSILVDQKNEKSEQLEEAMNAHSEESKGTHEMAGASGD--------- 652
G GDR+ +++ DQ+ + L+E+ E G+ E + D
Sbjct: 16 GTYGLGDRKDQGGYTMHQDQEGDTDAGLKESPLQTPTED-GSEEPGSETSDAKSTPTAEA 74
Query: 653 KELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLS----AVPTSM 708
+E G+G +P E A ++ Q + K K+ T + +++ A P
Sbjct: 75 EEAGIGDTPSLEDEAAGHVT-QARMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPP-- 131
Query: 709 GDMPSAPATSPPVKCPPVHEEPSLIQQLENLMGRKICEPPG---------KTPSWLQPSP 759
G A AT P K PP + P + R PG +TPS P P
Sbjct: 132 GQKGQANATRIPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTPSLPTP-P 190
Query: 760 TGKDRKQGGRKPKPLWLSPEKPLAWKGRLPSDDV--IGEGPGETEARDKGLRHEPGWGTS 817
T + +K + P S K +P D+ + G TE L+H+PG G
Sbjct: 191 TREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLKNVKSKIGSTE----NLKHQPGGGKV 246
Query: 818 RSVNTKERPQRATTKVHSDDS 838
+ +N K +K S D+
Sbjct: 247 QIINKKLDLSNVQSKCGSKDN 267
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.4 bits (93), Expect = 0.014
Identities = 74/316 (23%), Positives = 114/316 (36%), Gaps = 77/316 (24%)
Query: 650 SGDKELGLGCSPPAETLAD-----------AKLSSQGNVSGKRKNSTNCRKDSLSQLEEY 698
SG G G SP + + A+ S+ + K K+ T R+ S E
Sbjct: 1638 SGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPEL 1697
Query: 699 LRLSAVPTSMGDMPSAPATSPPVKCPPVHEEPSLIQQLENLMGRKICEPPGKTPSWLQPS 758
R + + S+P T + PP H ++PS P
Sbjct: 1698 TRKARLSRRSRSASSSPETRS--RTPPRHR---------------------RSPSVSSPE 1734
Query: 759 PTGKDRKQGGRKPKPLWLSPE-KPLAWKGRLPSDDVIGEGPGETEARDKGLRHEPGWGTS 817
P K R R+ SP K + +GR PS + +GL+ S
Sbjct: 1735 PAEKSRSSRRRRSAS---SPRTKTTSRRGRSPSP------------KPRGLQR------S 1773
Query: 818 RSVNTKERPQRATTKVHSDDSDIFNQPPNRERPASGRRGSRKDAGSSSHGDDQPASREDT 877
RS + +E+ + + S S ++ R+R S R +R+ G S + PA +E +
Sbjct: 1774 RSRSRREKTRTTRRRDRSGSSQSTSR--RRQRSRSRSRVTRRRRGGSGYHSRSPARQESS 1831
Query: 878 WS--------SRTPSRSRWRSEQEHTLHESW--SSLSAFDRSHRGRISNTELPGDILDEL 927
+ SRTP SR RS + T W S A +HR S T L
Sbjct: 1832 RTSSRRRRGRSRTPPTSRKRS-RSRTSPAPWKRSRSRASPATHRRSRSRT--------PL 1882
Query: 928 LQQKSSRHSDLPPSKK 943
+ ++ SR P S++
Sbjct: 1883 ISRRRSRSRTSPVSRR 1898
Score = 35.8 bits (81), Expect = 0.35
Identities = 43/175 (24%), Positives = 62/175 (35%), Gaps = 16/175 (9%)
Query: 795 GEGPGETEARDKGLRHEPGWGTSRSVNTKERPQRATTKVHSDDSDIFNQPPNRERPASGR 854
G T AR + P SRS + R R+ ++ + ++ P R GR
Sbjct: 613 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARR----GR 668
Query: 855 RGSRKDAGSSSHGDDQPASREDTWSSRTPSRSRWRS--------EQEHTLHESWSSLSAF 906
SR A S + +R SRTP R R RS T S S+
Sbjct: 669 SRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSS 728
Query: 907 DRSHRGRISNTELPGDILDEL----LQQKSSRHSDLPPSKKGEQPGLSRGQDGYS 957
+R ++ R S + E+ + + SR P SK + L R G S
Sbjct: 729 ERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSS 783
Score = 33.5 bits (75), Expect = 1.7
Identities = 64/316 (20%), Positives = 107/316 (33%), Gaps = 39/316 (12%)
Query: 78 SELKSSPRKAIHSDFSRSASHTEGTHDYGRRTLFREAEEALRRSS-------RTAPSKVQ 130
SE SSP R S + + + + L + E + SS RT +
Sbjct: 1478 SECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRS 1537
Query: 131 RRGWHQKSVQIRTEAGPRLHIEPPVDYSDDFELCGDVTLQANNTSEDRPQELRRSLELSV 190
R G Q+ + ++ A P+ E D S D + L+ + S P+ +S +
Sbjct: 1538 RSGSSQE-LDVKPSASPQERSES--DSSPDSKAKTRTPLRQRSRSGSSPEVDSKS---RL 1591
Query: 191 NLQRKQKDCSSDEYDS------IEEDILSEPEPEDPALVGHPRHDRPPSSGDWTQKDVHG 244
+ +R + S + D + S PEP+ PA PR R SS G
Sbjct: 1592 SPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEG 1651
Query: 245 EQETEGRSSPGPDTLVVLEFNPASKSHKRERNLSAKRKDNAEVFVPTKPEPNLTPQAPAV 304
TE P + + +S K + +R+ ++ P LT +A
Sbjct: 1652 SSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRS-------SRSSPELTRKARL- 1703
Query: 305 FPDQERMCSRPGSRRERPLSATRKTLCEAEYPEEDASAVLQAIQVENAALQRALLSRKAE 364
SRR R S++ +T + +V E + R S +
Sbjct: 1704 ------------SRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSP 1751
Query: 365 QPASPLQDAEGPPAKP 380
+ + + P KP
Sbjct: 1752 RTKTTSRRGRSPSPKP 1767
Score = 32.3 bits (72), Expect = 3.8
Identities = 37/145 (25%), Positives = 57/145 (39%), Gaps = 10/145 (6%)
Query: 755 LQPSPTGKDRKQG-GRKPKPLWLSPEKPLAWKGRLPSDDVIGEGPGETEA-RDKGLRHEP 812
+ SPT K+R G ++ K +P + + + R P+ G T R P
Sbjct: 453 ISSSPTSKNRSHGRAKRDKSHSHTPSRRMG-RSRSPATAKRGRSRSRTPTKRGHSRSRSP 511
Query: 813 GWGTSRSVNT--KERPQRATTKVHSDDSDIFNQPPN---RERPASGRRGSRKDAGSSSHG 867
W SRS + R + + S +++ N R R S RRG ++ G
Sbjct: 512 QWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRG 571
Query: 868 DDQPAS--REDTWSSRTPSRSRWRS 890
+ + R SRTP+R R RS
Sbjct: 572 RSRSRTPARRGRSRSRTPARRRSRS 596
Score = 31.2 bits (69), Expect = 8.5
Identities = 66/334 (19%), Positives = 122/334 (36%), Gaps = 39/334 (11%)
Query: 119 RRSSRTAPSKVQRRGWHQKSVQIRTEAGPRLHIEPPVDYSDDFELCGDVTLQANNTSEDR 178
RRS ++P + +++ +K + +E+ R H P T ++ S+D+
Sbjct: 198 RRSESSSPRRERKKSSKKKKHRSESESKKRKHRSP--------------TPKSKRKSKDK 243
Query: 179 PQELRRSLELSVNLQRKQKDCSSDEYDSIE----EDILSEPEPEDPALVGHPRHDRPPSS 234
++ RS + +R + S+D S + + + AL G P+S
Sbjct: 244 KRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAG---RSPSPAS 300
Query: 235 GDWTQKDV-HGEQETEGRSSP-GPDTLVVLEFNPASKSHKRERNLSAKRKDNAEVFVPTK 292
G + D E T P P+T +P K ++ SA R + T
Sbjct: 301 GRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTG 360
Query: 293 PEPNL-----------TPQAPAVFPDQERMCSRPGS---RRERPLSATRKTLCEAEYPEE 338
PEP +PQ A P + + P R+R + + L ++ E
Sbjct: 361 PEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSES 420
Query: 339 DASAVLQAIQVENAALQRALLSRKAEQPASPLQDAEGPPAKPWTSLLEEKEETLELLPIT 398
+ Q +V A + A P S + + P +K + +++++ P
Sbjct: 421 SPPSP-QPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSR 479
Query: 399 TATTTQEPAGAAGGARAINQAMDRIGLLGSRQQQ 432
++ PA A G R+ ++ + G SR Q
Sbjct: 480 RMGRSRSPATAKRG-RSRSRTPTKRGHSRSRSPQ 512
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 39.7 bits (91), Expect = 0.024
Identities = 76/330 (23%), Positives = 127/330 (38%), Gaps = 60/330 (18%)
Query: 638 EESKGTHEMAGASGDKELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEE 697
EE ++ S +K++ + + + SS+ ++SGK T S L++
Sbjct: 1027 EEEIDDKQVTQESKEKKVSENNETIKDNILKTEKSSEEDLSGKHDTVTVS-----SDLDQ 1081
Query: 698 YLRLSAVPTSMGDMPSAPATSPPVKCPP--VHEEPSLIQQLENLM----GRKICEPPGKT 751
+ + + + P+A T V C H E S+ +E+++ +IC P +
Sbjct: 1082 FTKDDS---KLSISPTALNTEENVACLQNIQHVEESVPNGVEDVLQTDDNMEICTPDRSS 1138
Query: 752 PSWLQP-SPTGKDR----------KQGGRKPKPLW--------LSPEKPLAWKGRLPSDD 792
P+ ++ SP G R KQ P +S K L G+ S
Sbjct: 1139 PAKVEETSPLGNARLDTPDINIVLKQDMATEHPQAEVVKQESSMSESKVLGEVGKQDSSS 1198
Query: 793 V----IGEGPGETEARDKGLRH--EPGWGTSRSVNTKERPQRATT------------KVH 834
GE G+ E +K + + W + V P AT+ ++
Sbjct: 1199 ASLASAGESTGKKEVAEKSQINLIDKKWKPLQGVGNLAAPNAATSSAVEVKVLTTVPEMK 1258
Query: 835 SDDSDIFNQPPNRERPAS-------GRRGSRKDAGSSSHGDDQPASREDTWSSRTPSRSR 887
I + N+ RP S R +R+ S D+Q SR+D SR+PSRSR
Sbjct: 1259 PQGLRIEIKSKNKVRPGSLFDEVRKTARLNRRPRNQESSSDEQTPSRDDDSQSRSPSRSR 1318
Query: 888 WRSEQEHTLHESWSSLSAFDRSHRGRISNT 917
+SE + + H + S + RS R R S +
Sbjct: 1319 SKSETK-SRHRTRSVSYSHSRS-RSRSSTS 1346
Score = 33.9 bits (76), Expect = 1.3
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 16/221 (7%)
Query: 77 NSELKSSPRKAIHSDFSRSASHTEGTHDYGRRTLFREAEEALRRS-SRTAPSKVQRRGWH 135
+S S + + HS SRS+S+T + D GRR R + S S S + H
Sbjct: 723 SSRSHSRNKYSDHSQCSRSSSYTSISSDDGRRAKRRLRSSGKKNSVSHKKHSSSSEKTLH 782
Query: 136 QKSVQIRTEAG-PRLHIE--PPVDYSDDFELCGDVTLQANNTSEDRPQELRRSLELSVNL 192
K V+ R + R + E +DYS D E ++QA +++++ E + +E + N
Sbjct: 783 SKYVKGRDRSSCVRKYSESRSSLDYSSDSE---QSSVQATQSAQEK--EKQGQMERTHNK 837
Query: 193 QRKQKDCSSDEYDSIEEDILSEPEPEDPALVGHPRHDRPPSSGDWTQKDVHGEQETEGRS 252
Q K + ++ S E S+ L H R+ P ++ E +E
Sbjct: 838 QEKNR--GEEKSKSERECPHSKKRTLKENLSDHLRNGSKPKRKNYAGSKWDSESNSERDV 895
Query: 253 SPGPDTLVVLEFNPASKSHKRERNLSAKRKDNAEVFVPTKP 293
+ + +P+S + E S + +E+ + KP
Sbjct: 896 TKNSKN----DSHPSSDKEEGEAT-SDSESEVSEIHIKVKP 931
Score = 31.6 bits (70), Expect = 6.5
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 820 VNTKERPQRATT--KVHSDDSDIFNQPPNRERPASGRRGSRKDAGSS-SHGDDQPASRED 876
+N + R Q +++ + S D D ++ P+R R S + + S SH + S
Sbjct: 1287 LNRRPRNQESSSDEQTPSRDDDSQSRSPSRSRSKSETKSRHRTRSVSYSHSRSRSRSSTS 1346
Query: 877 TWSSRTPSRSRWRSEQEHTLHESWSSLSAFDRSHR 911
++ SR+ SRSR R S SS +SHR
Sbjct: 1347 SYRSRSYSRSRSRGWYSRGRTRSRSSSYRSYKSHR 1381
>gi|18379328 WW domain-containing adapter with a coiled-coil region
isoform 1 [Homo sapiens]
Length = 647
Score = 38.9 bits (89), Expect = 0.041
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 662 PAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGDMPSAPATSPPV 721
P ++ K + + SG + S +C S S SA PTS +P +P P+
Sbjct: 294 PTSSVPAQKTERKESTSGDKPVSHSCTTPSTSSASGLNPTSAPPTSASAVPVSPVPQSPI 353
Query: 722 KCPPVHEEPSLIQQL 736
PP+ ++P+L++QL
Sbjct: 354 --PPLLQDPNLLRQL 366
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 [Homo
sapiens]
Length = 1125
Score = 38.5 bits (88), Expect = 0.053
Identities = 78/348 (22%), Positives = 115/348 (33%), Gaps = 60/348 (17%)
Query: 661 PPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGDMPSAPATSPP 720
PP T +S VSG R N+ + DS+ + P + ++P+ P T P
Sbjct: 754 PPPHT---PPISIPNLVSGARGNAES--GDSVKMYGS----AVPPAAPTNLPTPPVTQPV 804
Query: 721 VKCPPVHEEPSLIQQLE----NLMGRK-----ICEPPGKTPSWLQ------PSPTGKDRK 765
P + L+ L+G + + PPG P LQ P P
Sbjct: 805 SLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMM 864
Query: 766 QGGRKPKPLWLSPEKPLAWKGRLPSDDVI------------GEGPGETEARDKGLR---- 809
G P P + P KG P G GPG E RD +
Sbjct: 865 HRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQ 924
Query: 810 ----------HEPGWGTSRSVNTKERP---QRATTKVHSDDSDIFNQPPNRERPASGRRG 856
+P + ++P Q+ + +D+ FN ++ER G
Sbjct: 925 PQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFG 984
Query: 857 SRKDAGSSSHG---DDQPASRED--TWSSRTPSRSRWRSEQEHTLHESWSSLSAFD-RSH 910
+R + +G DD+ S D W R+P R R R +E S D R
Sbjct: 985 NRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDR 1044
Query: 911 RGRISNTELPGDILDELLQQKSSRHSDLPP-SKKGEQPGLSRGQDGYS 957
R E G E+ + + PP S+ G S + G S
Sbjct: 1045 ESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTASELEKGVS 1092
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 38.5 bits (88), Expect = 0.053
Identities = 72/309 (23%), Positives = 113/309 (36%), Gaps = 40/309 (12%)
Query: 602 GKLDKGDREAP-ADHSILVDQKNEKSEQLEEAMNAHSEESKGTHEMAGASGDKELGLGCS 660
GK +G + P DH+ L Q++ Q ++A E K + ++ G
Sbjct: 255 GKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPG-K 313
Query: 661 PPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGDMPSAPATSPP 720
PPA+ K SQ + + K L+Q ++ P P+ P P
Sbjct: 314 PPAQQPGHEK--SQPGPAKPPAQPSGLTKP-LAQQPGTVKPPVQPPGTTKPPAQPLG--P 368
Query: 721 VKCPPVHEEPSLIQQLENLMGRKICEPP--GKTPSWLQPSPTGKDRKQGGRKPKPLWLSP 778
K PP + S E + + +PP GKTP+ QP P +Q G PKPL P
Sbjct: 369 AK-PPAQQTGSEKPSSEQPGPKALAQPPGVGKTPA-QQPGPAKPPTQQVG-TPKPLAQQP 425
Query: 779 EKPLAWK--------------GRLPSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKE 824
K G++P+ GPG+T A+ G P + +
Sbjct: 426 GLQSPAKAPGPTKTPVQQPGPGKIPAQQA---GPGKTSAQQTGPTKPPSQLPGPAKPPPQ 482
Query: 825 RP--------QRATTKVHSDDSDIFNQPPNRERPASGRRGSRKDAGSSSHGDDQPASRED 876
+P Q + K S PP + PA + S + GS+ QP S +
Sbjct: 483 QPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPA---KPSPQQPGSTKPPSQQPGSAKP 539
Query: 877 TWSSRTPSR 885
+ +P++
Sbjct: 540 SAQQPSPAK 548
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 38.5 bits (88), Expect = 0.053
Identities = 72/309 (23%), Positives = 113/309 (36%), Gaps = 40/309 (12%)
Query: 602 GKLDKGDREAP-ADHSILVDQKNEKSEQLEEAMNAHSEESKGTHEMAGASGDKELGLGCS 660
GK +G + P DH+ L Q++ Q ++A E K + ++ G
Sbjct: 255 GKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPG-K 313
Query: 661 PPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGDMPSAPATSPP 720
PPA+ K SQ + + K L+Q ++ P P+ P P
Sbjct: 314 PPAQQPGHEK--SQPGPAKPPAQPSGLTKP-LAQQPGTVKPPVQPPGTTKPPAQPLG--P 368
Query: 721 VKCPPVHEEPSLIQQLENLMGRKICEPP--GKTPSWLQPSPTGKDRKQGGRKPKPLWLSP 778
K PP + S E + + +PP GKTP+ QP P +Q G PKPL P
Sbjct: 369 AK-PPAQQTGSEKPSSEQPGPKALAQPPGVGKTPA-QQPGPAKPPTQQVG-TPKPLAQQP 425
Query: 779 EKPLAWK--------------GRLPSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKE 824
K G++P+ GPG+T A+ G P + +
Sbjct: 426 GLQSPAKAPGPTKTPVQQPGPGKIPAQQA---GPGKTSAQQTGPTKPPSQLPGPAKPPPQ 482
Query: 825 RP--------QRATTKVHSDDSDIFNQPPNRERPASGRRGSRKDAGSSSHGDDQPASRED 876
+P Q + K S PP + PA + S + GS+ QP S +
Sbjct: 483 QPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPA---KPSPQQPGSTKPPSQQPGSAKP 539
Query: 877 TWSSRTPSR 885
+ +P++
Sbjct: 540 SAQQPSPAK 548
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo
sapiens]
Length = 1132
Score = 38.1 bits (87), Expect = 0.070
Identities = 80/363 (22%), Positives = 119/363 (32%), Gaps = 67/363 (18%)
Query: 646 MAGASGDKELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVP 705
+AG + D L P T+ VSG R N+ + DS+ + P
Sbjct: 753 IAGINEDTTKDLSIGNPIPTV----------VSGARGNAES--GDSVKMYGS----AVPP 796
Query: 706 TSMGDMPSAPATSPPVKCPPVHEEPSLIQQLE----NLMGRK-----ICEPPGKTPSWLQ 756
+ ++P+ P T P P + L+ L+G + + PPG P LQ
Sbjct: 797 AAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQ 856
Query: 757 ------PSPTGKDRKQGGRKPKPLWLSPEKPLAWKGRLPSDDVI------------GEGP 798
P P G P P + P KG P G GP
Sbjct: 857 RFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP 916
Query: 799 GETEARDKGLR--------------HEPGWGTSRSVNTKERP---QRATTKVHSDDSDIF 841
G E RD + +P + ++P Q+ + +D+ F
Sbjct: 917 GGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQF 976
Query: 842 NQPPNRERPASGRRGSRKDAGSSSHG---DDQPASRED--TWSSRTPSRSRWRSEQEHTL 896
N ++ER G+R + +G DD+ S D W R+P R R R +E
Sbjct: 977 NSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNR 1036
Query: 897 HESWSSLSAFD-RSHRGRISNTELPGDILDELLQQKSSRHSDLPP-SKKGEQPGLSRGQD 954
S D R R E G E+ + + PP S+ G S +
Sbjct: 1037 RSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTASELEK 1096
Query: 955 GYS 957
G S
Sbjct: 1097 GVS 1099
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
sapiens]
Length = 1147
Score = 38.1 bits (87), Expect = 0.070
Identities = 80/363 (22%), Positives = 119/363 (32%), Gaps = 67/363 (18%)
Query: 646 MAGASGDKELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVP 705
+AG + D L P T+ VSG R N+ + DS+ + P
Sbjct: 768 IAGINEDTTKDLSIGNPIPTV----------VSGARGNAES--GDSVKMYGS----AVPP 811
Query: 706 TSMGDMPSAPATSPPVKCPPVHEEPSLIQQLE----NLMGRK-----ICEPPGKTPSWLQ 756
+ ++P+ P T P P + L+ L+G + + PPG P LQ
Sbjct: 812 AAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQ 871
Query: 757 ------PSPTGKDRKQGGRKPKPLWLSPEKPLAWKGRLPSDDVI------------GEGP 798
P P G P P + P KG P G GP
Sbjct: 872 RFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP 931
Query: 799 GETEARDKGLR--------------HEPGWGTSRSVNTKERP---QRATTKVHSDDSDIF 841
G E RD + +P + ++P Q+ + +D+ F
Sbjct: 932 GGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQF 991
Query: 842 NQPPNRERPASGRRGSRKDAGSSSHG---DDQPASRED--TWSSRTPSRSRWRSEQEHTL 896
N ++ER G+R + +G DD+ S D W R+P R R R +E
Sbjct: 992 NSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNR 1051
Query: 897 HESWSSLSAFD-RSHRGRISNTELPGDILDELLQQKSSRHSDLPP-SKKGEQPGLSRGQD 954
S D R R E G E+ + + PP S+ G S +
Sbjct: 1052 RSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTASELEK 1111
Query: 955 GYS 957
G S
Sbjct: 1112 GVS 1114
>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
Length = 733
Score = 38.1 bits (87), Expect = 0.070
Identities = 48/182 (26%), Positives = 67/182 (36%), Gaps = 31/182 (17%)
Query: 705 PTSMGDMPSAPATSPPVKCPPVHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDR 764
P + ++P P SPP P ++EP L L +L PP + +P
Sbjct: 258 PLAERELPPRP-DSPPSAGPAAYKEPPLA--LPSL-------PPLPFQKLEEAAPPSDPF 307
Query: 765 KQGGRKPKPLWLSPEKPLAWKGRLPSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKE 824
+ G P PE P GR P + ++HEPG G+ +E
Sbjct: 308 RGGSGSP-----GPEPP----GR----------PDGPSLLYRWMKHEPGLGSYGDELGRE 348
Query: 825 R--PQRATTKVHSDDSDIFNQPPNRERPASGRRGSRKDAGSSSHGDDQPASREDTWSSRT 882
R P + D + PP P GS G+ GDD +S E+T SS
Sbjct: 349 RGSPSERCEERGGDAAVSPGGPPLGLAPPPRYPGSLDGPGAGGDGDDYKSSSEETGSSED 408
Query: 883 PS 884
PS
Sbjct: 409 PS 410
>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
Length = 714
Score = 38.1 bits (87), Expect = 0.070
Identities = 48/182 (26%), Positives = 67/182 (36%), Gaps = 31/182 (17%)
Query: 705 PTSMGDMPSAPATSPPVKCPPVHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDR 764
P + ++P P SPP P ++EP L L +L PP + +P
Sbjct: 239 PLAERELPPRP-DSPPSAGPAAYKEPPLA--LPSL-------PPLPFQKLEEAAPPSDPF 288
Query: 765 KQGGRKPKPLWLSPEKPLAWKGRLPSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKE 824
+ G P PE P GR P + ++HEPG G+ +E
Sbjct: 289 RGGSGSP-----GPEPP----GR----------PDGPSLLYRWMKHEPGLGSYGDELGRE 329
Query: 825 R--PQRATTKVHSDDSDIFNQPPNRERPASGRRGSRKDAGSSSHGDDQPASREDTWSSRT 882
R P + D + PP P GS G+ GDD +S E+T SS
Sbjct: 330 RGSPSERCEERGGDAAVSPGGPPLGLAPPPRYPGSLDGPGAGGDGDDYKSSSEETGSSED 389
Query: 883 PS 884
PS
Sbjct: 390 PS 391
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 38.1 bits (87), Expect = 0.070
Identities = 58/295 (19%), Positives = 106/295 (35%), Gaps = 48/295 (16%)
Query: 153 PPVDYSDDFELCGDVTLQANNTSEDRPQELRRSL------------ELSVNLQRKQKDCS 200
P +D D + D L + N+++D+ Q+ ++ E +N Q ++D
Sbjct: 4800 PGMDEEDSELVAKDDNLDSGNSNKDKSQQDKKEEKEEAEADDGGQGEDKINEQIDERDYD 4859
Query: 201 SDEYDSIEEDILSEPEPEDPALVGHPRHDRPPSSGDWTQKDVHGEQETEGRSSPGPDTLV 260
+E D + PEPE L P + +D +G ++T+ + L
Sbjct: 4860 ENEVDPYHGNQEKVPEPEALDL---------PDDLNLDSEDKNGGEDTDNEEGEEENPLE 4910
Query: 261 VLEFNPASKSHKRERNLSAKRKDNAEVFVPTKPEPNLTPQAPAVFPDQERMCSRPGSRRE 320
+ E P H+ E + N + +PQ P P ++ + E
Sbjct: 4911 IKE-KPEEAGHEAEERGETETDQN----------ESQSPQEPEEGPSED---DKAEGEEE 4956
Query: 321 RPLSATRKTLCEAEYPEEDASAVLQAI-QVENAALQRALLSRKAEQPASPLQDAEGPPAK 379
A + A++PEE + Q++ + + A + + A+Q P ++ E
Sbjct: 4957 MDTGADDQDGDAAQHPEEHSEEQQQSVEEKDKEADEEGGENGPADQGFQPQEEEE----- 5011
Query: 380 PWTSLLEEKEETLELLPITTATTTQEPAGAAGGARAIN-QAMDRIGLLGSRQQQK 433
E +T E +P G G N QAM+ G ++Q K
Sbjct: 5012 ------REDSDTEEQVPEALERKEHASCGQTGVENMQNTQAMELAGAAPEKEQGK 5060
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 37.7 bits (86), Expect = 0.091
Identities = 90/470 (19%), Positives = 161/470 (34%), Gaps = 44/470 (9%)
Query: 2 DGQTLRKAERSWSCSREKKEGYAKDMVTDFDEKHDEYLILLQQRNRILKHLKSKDPVQLR 61
D + RK ER S R+ + + +E+ D+ R R ++LK+++ +
Sbjct: 217 DDEKPRKGERRSSRVRQARAAKLSEGSQPAEEEEDQETPSRNLRVRADRNLKTEEEEEEE 276
Query: 62 LEHLEQGFSVYVNGANSELKSSPRKAIHSDFSRSASHTEGTHDYGRRTLFREAE-EALRR 120
E E + + + +P + + R R E E L R
Sbjct: 277 EEEEEDDEEEEGDDEGQKSREAPILKEFKEEGEEIPRVKPEEMMDERPKTRSQEQEVLER 336
Query: 121 SSRTAPSKVQRRGWHQKSVQIRTEAGPRLHIEPPVDYSDDFELCGDVTLQANNTSEDRPQ 180
R S+ + R KS R + + P++ ++ E+ L+ + S P
Sbjct: 337 GGRFTRSQEEAR----KSHLARQQQEKEMKTTSPLE-EEEREIKSSQGLKEKSKSPSPP- 390
Query: 181 ELRRSLELSVNLQRKQKDCSSDEYDSIEEDILSEPEPEDPALVGHPRHDRPPSSGDWTQK 240
R +D ++ E SE E P L P
Sbjct: 391 -------------RLTEDRKKASLVALPEQTASEEETPPPLLTKEASSPPP-------HP 430
Query: 241 DVHGEQETEGRSSPGPDTLVVLEFNPASKSHKRERNLSAKRKDNAEVFVPTKPEPNLTPQ 300
+H E+E E P P L+ L P + + RE +S P + +
Sbjct: 431 QLHSEEEIEPMEGPAPPVLIQLS-PPNTDADTRELLVSQHTVQLVGGLSPLSSPSDTKAE 489
Query: 301 APAVFPDQERMCSRPGSRRERPLSATRKTLCEAEYPEEDASAVLQAIQVENAALQRALLS 360
+PA +E + SA + PE D SA +++E AL + +
Sbjct: 490 SPAEKVPEESVLPLVQKSTLADYSAQKDL-----EPESDRSAQPLPLKIEELALAKGITE 544
Query: 361 RKAEQPASPLQDAEGPPAKPWTSLLEEKEETLELLPITTATTTQEPAGAAGGARAINQAM 420
+QP+ L+ EG A +LL L +++++ + ++ +R+ +++
Sbjct: 545 ECLKQPS--LEQKEGRRAS--HTLLPSH----RLKQSADSSSSRSSSSSSSSSRSRSRSP 596
Query: 421 DRIGLLGSRQQQKLLKVLQAVESDSAHLGRVVSPTKEQVSDTEDKQRMRA 470
D GSR L + V H P S +E + R R+
Sbjct: 597 DS---SGSRSHSPLRSKQRDVAQARTHANPRGRPKMGSRSTSESRSRSRS 643
Score = 32.0 bits (71), Expect = 5.0
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 3/128 (2%)
Query: 290 PTKPEPNLTPQAP-AVFPDQERMCSRPGSRRERPLSATRKTLCEAEYPEEDASAVLQAIQ 348
P P P PQ P A +QER + RER + +T E E+ + ++
Sbjct: 1119 PPPPPPVQPPQHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRS 1178
Query: 349 VENAALQRALLSRKAEQPASPLQDAEGPPAKPWTSLLEEKEET--LELLPITTATTTQEP 406
++ K ++ + E PPAK L + + + LP+T + Q+
Sbjct: 1179 RSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKE 1238
Query: 407 AGAAGGAR 414
A A A+
Sbjct: 1239 AERAERAK 1246
>gi|18379332 WW domain-containing adapter with a coiled-coil region
isoform 3 [Homo sapiens]
Length = 544
Score = 37.7 bits (86), Expect = 0.091
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 664 ETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGDMPSAPATSPPVKC 723
+ A + +S + SG + S +C S S SA PTS +P +P P+
Sbjct: 193 QATATSGFASGKSTSGDKPVSHSCTTPSTSSASGLNPTSAPPTSASAVPVSPVPQSPI-- 250
Query: 724 PPVHEEPSLIQQL 736
PP+ ++P+L++QL
Sbjct: 251 PPLLQDPNLLRQL 263
>gi|238624188 diffuse panbronchiolitis critical region 1 protein
[Homo sapiens]
Length = 1393
Score = 37.4 bits (85), Expect = 0.12
Identities = 40/200 (20%), Positives = 75/200 (37%), Gaps = 19/200 (9%)
Query: 757 PSPTGKDRKQGGRKPKPLWLSPEKPLAWKGRLPSDDVIGEGPGETEARDKGLRH------ 810
PSP + + LSP +P+ + R +++ G TE R+
Sbjct: 299 PSPAEPTENRERTANENTTLSPAEPIENRERTANENTAPFPAGPTENREMTANENTTLFP 358
Query: 811 -EPGWGTSRSVNTKERPQRATTKVHSDDSDIFNQPPNRERPA--------SGRRGSRKDA 861
EP R+ N P A H + + N P+ P + + + A
Sbjct: 359 AEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDKTTSSSA 418
Query: 862 GSSSHGDDQPASREDTWSSRTPSRSRWRSEQEHTLHESWSSLSAFDRSHRGRISNTELPG 921
S+ HG+ P + E+T TPS + +E T +E+ + A +R +N +
Sbjct: 419 ESTEHGERTPLANENT----TPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTL 474
Query: 922 DILDELLQQKSSRHSDLPPS 941
++ ++++ + PS
Sbjct: 475 SPVEPTENRETTANEKTTPS 494
>gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1a
[Homo sapiens]
Length = 961
Score = 37.4 bits (85), Expect = 0.12
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 16/173 (9%)
Query: 712 PSAPATSPPVKCPPVHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDRKQGGRKP 771
P AP++S P++ +EPS + + + E QP P+ + R+ +
Sbjct: 789 PPAPSSSLPIR-----QEPSSFRAVPPPQPQMFGEELPDAQDGEQPGPSRRKRQPSMSET 843
Query: 772 KPLWLSPEKPLAWKGRLPSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKERPQRATT 831
PL+ ++ L + DD++GEG ++++ + + R T+ R +
Sbjct: 844 MPLYTLCKEDLESMDK-EVDDILGEGSDDSDSEKRRPEEQEEEPQPRKPGTR-RERTLGA 901
Query: 832 KVHSDDSDIFNQPP-------NRERPAS--GRRGSRKDAGSSSHGDDQPASRE 875
S+ S + P N E AS R S +D GSSS D+ + E
Sbjct: 902 PASSERSAAGGRGPRGHKRKLNEEDAASESSRESSNEDEGSSSEADEMAKALE 954
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 37.4 bits (85), Expect = 0.12
Identities = 58/258 (22%), Positives = 93/258 (36%), Gaps = 40/258 (15%)
Query: 166 DVTLQANNTSEDRPQELRRSLELSVNLQRKQKDCSSDEYDSIEEDILSEPEPEDPALVGH 225
D+T+ N+S++ +E E + +++D +E D EE+ E E E+
Sbjct: 877 DLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEED--EEEYFEEEEEEEEEF--- 931
Query: 226 PRHDRPPSSGDWTQKDVHGEQETEGRSSPGPDTLVVLEFNPASKSHKRERNLSAKRKDNA 285
+ G+ +++ ++E E D LEF A
Sbjct: 932 -EEEFEEEEGELEEEEEEEDEEEEEELEEVED----LEFGTA----------------GG 970
Query: 286 EVFVPTKPEPNLTPQAPAVFPDQERMCSRPGSRRERPLSATRKTLCEAEYP--EEDASAV 343
EV P P L P P P + +P E L L E E P EE+ A
Sbjct: 971 EVEEGAPPPPTLPPALP---PPESPPKVQPEPEPEPGL------LLEVEEPGTEEERGAD 1021
Query: 344 LQAIQVENAALQRALLSRKAEQPAS---PLQDAEGPPAKPWTSLLEEKEETLELLPITTA 400
A + + R+ E PA+ P + E P+ P T L EE E+ + +
Sbjct: 1022 TAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPE 1081
Query: 401 TTTQEPAGAAGGARAINQ 418
T +E A A+ +
Sbjct: 1082 TPAEEEMETETEAEALQE 1099
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 37.0 bits (84), Expect = 0.16
Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 16/140 (11%)
Query: 644 HEMAGASGDKELGLGCSPPAETLADAKLSSQGNVSGKR-KNSTNCRKDSLSQL------E 696
++ +SG +G+G PPA+T SQG V G N N SQL +
Sbjct: 759 NQFPSSSGAMSVGMG-QPPAQTGV-----SQGQVPGAALPNPLNMLGPQASQLPCPPVTQ 812
Query: 697 EYLRLSAVPTSMG-DMPSAPATSPPVKCPPVHEEPSLIQQLENLMGRKICEPPGKTPS-- 753
L + P S MPS T+PP PP P+ + G+ PG PS
Sbjct: 813 SPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSAT 872
Query: 754 WLQPSPTGKDRKQGGRKPKP 773
Q +PT + Q P+P
Sbjct: 873 QTQSTPTVQAAAQAQVTPQP 892
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 37.0 bits (84), Expect = 0.16
Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 16/140 (11%)
Query: 644 HEMAGASGDKELGLGCSPPAETLADAKLSSQGNVSGKR-KNSTNCRKDSLSQL------E 696
++ +SG +G+G PPA+T SQG V G N N SQL +
Sbjct: 797 NQFPSSSGAMSVGMG-QPPAQTGV-----SQGQVPGAALPNPLNMLGPQASQLPCPPVTQ 850
Query: 697 EYLRLSAVPTSMG-DMPSAPATSPPVKCPPVHEEPSLIQQLENLMGRKICEPPGKTPS-- 753
L + P S MPS T+PP PP P+ + G+ PG PS
Sbjct: 851 SPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSAT 910
Query: 754 WLQPSPTGKDRKQGGRKPKP 773
Q +PT + Q P+P
Sbjct: 911 QTQSTPTVQAAAQAQVTPQP 930
>gi|54124343 hypothetical protein LOC387680 [Homo sapiens]
Length = 1341
Score = 37.0 bits (84), Expect = 0.16
Identities = 77/384 (20%), Positives = 140/384 (36%), Gaps = 46/384 (11%)
Query: 591 KLYVNRNLIFNGKLDKGDREAPADHSILVDQKNEKSEQLEEAMNAHSEESKGTHEMAGAS 650
KL++ + + G+L + +D +VD + EK E+ + AH +++ S
Sbjct: 191 KLFMEQEDVGLGELSSEEGSVGSDRGSIVDTEEEKEEEESDEDFAHHSDNEQNRHTTQMS 250
Query: 651 GDKELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGD 710
++E GC + AD++ + ++ +N+ R S +E L ++G
Sbjct: 251 DEEEDDDGC----DLFADSE-KEEEDIEDIEENTRPKRSRPTSFADE-LAARIKGDAVGR 304
Query: 711 MPSAPATSPPVKCPP--VHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDRKQGG 768
+ P T P + P +E + + + PP T P +G GG
Sbjct: 305 VDEEPTTLPSGEAKPRKTLKEKKERRTPSDDEEDNLFAPPKLTDEDFSPFGSGGGLFSGG 364
Query: 769 RKPKPLWLSPEKPLAWKGRLPSDDVIGEGPGETEARDKGLRHEP--------------GW 814
K L+ ++ P D G E + K + P G
Sbjct: 365 ---KGLFDDEDEESDLFTEAPQDRQAGASVKEESSSSKPGKKIPAGAVSVFLGDTDVFGA 421
Query: 815 GTSRSVNTKERPQRATTKV--------------HSDDSDIFNQPPNRERPASGRRGSRKD 860
+ S+ ++P++ T + DD D F P+ + +G+ S D
Sbjct: 422 ASVPSMKEPQKPEQPTPRKSPYGPPPTGLFDDDDGDDDDDFFSAPHSKPSKTGKVQSTAD 481
Query: 861 AGSSSHGD----DQPASREDTWSSRTPSRSRWRSEQEHTLHESWS-SLSAFDRSHRGRIS 915
GD AS E T S +++ R+E++ TL S + S+ ++ +G S
Sbjct: 482 IFGDEEGDLFKEKAVASPEATVSQTDENKA--RAEKKVTLSSSKNLKPSSETKTQKGLFS 539
Query: 916 NTELPGDILDELLQQKSSRHSDLP 939
+ E D+ K S LP
Sbjct: 540 DEEDSEDLFSSQSASKLKGASLLP 563
>gi|154090959 hypothetical protein LOC55747 [Homo sapiens]
Length = 1253
Score = 37.0 bits (84), Expect = 0.16
Identities = 77/384 (20%), Positives = 140/384 (36%), Gaps = 46/384 (11%)
Query: 591 KLYVNRNLIFNGKLDKGDREAPADHSILVDQKNEKSEQLEEAMNAHSEESKGTHEMAGAS 650
KL++ + + G+L + +D +VD + EK E+ + AH +++ S
Sbjct: 103 KLFMEQEDVGLGELSSEEGSVGSDRGSIVDTEEEKEEEESDEDFAHHSDNEQNRHTTQMS 162
Query: 651 GDKELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGD 710
++E GC + AD++ + ++ +N+ R S +E L ++G
Sbjct: 163 DEEEDDDGC----DLFADSE-KEEEDIEDIEENTRPKRSRPTSFADE-LAARIKGDAVGR 216
Query: 711 MPSAPATSPPVKCPP--VHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDRKQGG 768
+ P T P + P +E + + + PP T P +G GG
Sbjct: 217 VDEEPTTLPSGEAKPRKTLKEKKERRTPSDDEEDNLFTPPKLTDEDFSPFGSGGGLFSGG 276
Query: 769 RKPKPLWLSPEKPLAWKGRLPSDDVIGEGPGETEARDKGLRHEP--------------GW 814
K L+ ++ P D G E + K + P G
Sbjct: 277 ---KGLFDDEDEESDLFTEAPQDRQAGASVKEESSSSKPGKKIPAGAVSVFLGDTDVFGA 333
Query: 815 GTSRSVNTKERPQRATTKV--------------HSDDSDIFNQPPNRERPASGRRGSRKD 860
+ S+ ++P++ T + DD D F P+ + +G+ S D
Sbjct: 334 ASVPSMKEPQKPEQPTPRKSPYGPPPTGLFDDDDGDDDDDFFSAPHSKPSKTGKVQSTAD 393
Query: 861 AGSSSHGD----DQPASREDTWSSRTPSRSRWRSEQEHTLHESWS-SLSAFDRSHRGRIS 915
GD AS E T S +++ R+E++ TL S + S+ ++ +G S
Sbjct: 394 IFGDEEGDLFKEKAVASPEATVSQTDENKA--RAEKKVTLSSSKNLKPSSETKTQKGLFS 451
Query: 916 NTELPGDILDELLQQKSSRHSDLP 939
+ E D+ K S LP
Sbjct: 452 DEEDSEDLFSSQSASKLKGASLLP 475
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 36.6 bits (83), Expect = 0.20
Identities = 69/299 (23%), Positives = 98/299 (32%), Gaps = 54/299 (18%)
Query: 608 DREAPADHSILVDQKNEKSEQLEEAMNAHSEESKGTHEMAGASGDKELGLGCSPPAETLA 667
DRE A + DQ+ + + EEA A S G K L L C P T
Sbjct: 66 DREEEAAAAPAADQQRAQDRE-EEAAAAPVPTSSGHR----TEKRKRLQLQCQPAGGT-- 118
Query: 668 DAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLRLSAVPTSMGDMPSAPATSPPVKCPP-- 725
G G R +S + + EE + VPTS G P + P
Sbjct: 119 -------GQRRGSR-SSPSADQQRAQDREEEAAAAPVPTSRGHRTEKRKRQQPQRRPAGG 170
Query: 726 ------VHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDRKQGGRKPKPLWLSPE 779
PS QQ G + E P+PT + + RKP+ P
Sbjct: 171 TGQRRGSGSSPSADQQ-----GAQDREEEAAAA----PAPTSRGHRTEKRKPQQPQCRPA 221
Query: 780 KPLAWKGRLPSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKERPQRATTKVHSDDSD 839
G T R +G R P R+ + +E A
Sbjct: 222 -------------------GGTGQR-RGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRT 261
Query: 840 IFNQPPNRERPASGRRGSRKDAGSSSHGDDQPAS--REDTWSSRTPSRSRWRSEQEHTL 896
+P +R +G G R+ +G S D Q A E+ ++ P+ S R+E+ L
Sbjct: 262 EKRKPQQPQRRPAGGTGQRRGSGYSPSADQQGAQDREEEAAAAPAPTSSGHRTEKRKRL 320
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 36.6 bits (83), Expect = 0.20
Identities = 69/302 (22%), Positives = 106/302 (35%), Gaps = 54/302 (17%)
Query: 610 EAPADHSILVDQKNEKSEQLEEAMNAHSEESKGTHEMAGAS---------GDKELGLGCS 660
E D + ++ S + ++ S +SK HE+ G+S G KE G G
Sbjct: 1856 EGGPDSKLKKSKRRSCSHCSSKVCDSKSYKSKEPHELVGSSPHREASPMPGAKEAGQGKD 1915
Query: 661 PPAETLADAKLSSQGN--------------VSGKRKNSTNCRKDSLSQLEEYLRLSAVPT 706
E + + S++ VSG ST ++ + E L L P
Sbjct: 1916 MMEEEAPEERESTEATQSRTVRTTRKGEMPVSGLAVGSTLPSPREVT-VTERLLLDGPPP 1974
Query: 707 SMGDMPSAPATSPPVKCPPVHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDRKQ 766
+ P P T+ V L N +G ++ P +P LQ G+
Sbjct: 1975 HSPETPQFPPTTGAV----------LYTVKRNQVGPEVRSCPKASPR-LQKEREGQKAVS 2023
Query: 767 GGRKPKPLW-LSPEKPLAWKGRLPSDDVIGEGPGETEARDKGLRHEPG-------WGTSR 818
+W S + L P+ + P ++ RD G RH G W S
Sbjct: 2024 ESEALMLVWDASETEKLPGTVEPPASFL---SPVSSKTRDAGRRHVSGKPDTQERWLPSS 2080
Query: 819 SVNTKERPQRATTKVHSDDSDIFNQPPNRERPASGRRGSRKDAGSSS---HGDDQPASRE 875
K R + T VH S I + P + R G KD+G+ + G+ QP + E
Sbjct: 2081 RARVKTRDR--TCPVHESPSGI---DTSETSPKAPRGGLAKDSGTQAKGPEGEQQPKAAE 2135
Query: 876 DT 877
T
Sbjct: 2136 AT 2137
>gi|189011568 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 36.2 bits (82), Expect = 0.26
Identities = 76/345 (22%), Positives = 121/345 (35%), Gaps = 52/345 (15%)
Query: 638 EESKGTHEMAGASGDKELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEE 697
E K E G G K++ ++L K+ S +SG+ K S+S+
Sbjct: 2177 ETKKIESESKGIKGGKKV-------YKSLITGKVRSNSEISGQMKQPLQANMPSISRGRT 2229
Query: 698 YLRLSAVPTSMGDMPSAPATSPPVKCP--------------PVHEEPSLIQQLENLMGRK 743
+ + V S PP+K P P +PS+ +L + + R+
Sbjct: 2230 MIHIPGVRNSSSSTSPVSKKGPPLKTPASKSPSEGQTATTSPRGAKPSVKSEL-SPVARQ 2288
Query: 744 ICEPPG------------KTPSWLQPSPTGKDRKQGGR---KPKPLWLSPEKPLAWKGRL 788
+ G TPS P + + GR P +SP L+ +L
Sbjct: 2289 TSQIGGSSKAPSRSGSRDSTPSRPAQQPLSRPIQSPGRNSISPGRNGISPPNKLS---QL 2345
Query: 789 PSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKER--PQRATTKVHSDD-SDIFNQPP 845
P ++ K PG S+ TK+ + A++ S+ S NQ
Sbjct: 2346 PRTSSPSTASTKSSGSGKMSYTSPGRQMSQQNLTKQTGLSKNASSIPRSESASKGLNQMN 2405
Query: 846 N----RERPASGRRGSRKDAGSSSHGDDQPA-SREDTWSSRTPSRSRWRSEQEHTLHESW 900
N ++ R S K +GS S ++P R+ T+ PS + R +E ES
Sbjct: 2406 NGNGANKKVELSRMSSTKSSGSESDRSERPVLVRQSTFIKEAPSPTLRRKLEESASFESL 2465
Query: 901 SSLSAFDRSHRGRISNTELPGDILDELLQQKSSRHS----DLPPS 941
S S R + L + D L SS + LPP+
Sbjct: 2466 SPSSRPASPTRSQAQTPVLSPSLPDMSLSTHSSVQAGGWRKLPPN 2510
>gi|189011566 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 36.2 bits (82), Expect = 0.26
Identities = 76/345 (22%), Positives = 121/345 (35%), Gaps = 52/345 (15%)
Query: 638 EESKGTHEMAGASGDKELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEE 697
E K E G G K++ ++L K+ S +SG+ K S+S+
Sbjct: 2177 ETKKIESESKGIKGGKKV-------YKSLITGKVRSNSEISGQMKQPLQANMPSISRGRT 2229
Query: 698 YLRLSAVPTSMGDMPSAPATSPPVKCP--------------PVHEEPSLIQQLENLMGRK 743
+ + V S PP+K P P +PS+ +L + + R+
Sbjct: 2230 MIHIPGVRNSSSSTSPVSKKGPPLKTPASKSPSEGQTATTSPRGAKPSVKSEL-SPVARQ 2288
Query: 744 ICEPPG------------KTPSWLQPSPTGKDRKQGGR---KPKPLWLSPEKPLAWKGRL 788
+ G TPS P + + GR P +SP L+ +L
Sbjct: 2289 TSQIGGSSKAPSRSGSRDSTPSRPAQQPLSRPIQSPGRNSISPGRNGISPPNKLS---QL 2345
Query: 789 PSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKER--PQRATTKVHSDD-SDIFNQPP 845
P ++ K PG S+ TK+ + A++ S+ S NQ
Sbjct: 2346 PRTSSPSTASTKSSGSGKMSYTSPGRQMSQQNLTKQTGLSKNASSIPRSESASKGLNQMN 2405
Query: 846 N----RERPASGRRGSRKDAGSSSHGDDQPA-SREDTWSSRTPSRSRWRSEQEHTLHESW 900
N ++ R S K +GS S ++P R+ T+ PS + R +E ES
Sbjct: 2406 NGNGANKKVELSRMSSTKSSGSESDRSERPVLVRQSTFIKEAPSPTLRRKLEESASFESL 2465
Query: 901 SSLSAFDRSHRGRISNTELPGDILDELLQQKSSRHS----DLPPS 941
S S R + L + D L SS + LPP+
Sbjct: 2466 SPSSRPASPTRSQAQTPVLSPSLPDMSLSTHSSVQAGGWRKLPPN 2510
>gi|53759122 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 36.2 bits (82), Expect = 0.26
Identities = 76/345 (22%), Positives = 121/345 (35%), Gaps = 52/345 (15%)
Query: 638 EESKGTHEMAGASGDKELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEE 697
E K E G G K++ ++L K+ S +SG+ K S+S+
Sbjct: 2177 ETKKIESESKGIKGGKKV-------YKSLITGKVRSNSEISGQMKQPLQANMPSISRGRT 2229
Query: 698 YLRLSAVPTSMGDMPSAPATSPPVKCP--------------PVHEEPSLIQQLENLMGRK 743
+ + V S PP+K P P +PS+ +L + + R+
Sbjct: 2230 MIHIPGVRNSSSSTSPVSKKGPPLKTPASKSPSEGQTATTSPRGAKPSVKSEL-SPVARQ 2288
Query: 744 ICEPPG------------KTPSWLQPSPTGKDRKQGGR---KPKPLWLSPEKPLAWKGRL 788
+ G TPS P + + GR P +SP L+ +L
Sbjct: 2289 TSQIGGSSKAPSRSGSRDSTPSRPAQQPLSRPIQSPGRNSISPGRNGISPPNKLS---QL 2345
Query: 789 PSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKER--PQRATTKVHSDD-SDIFNQPP 845
P ++ K PG S+ TK+ + A++ S+ S NQ
Sbjct: 2346 PRTSSPSTASTKSSGSGKMSYTSPGRQMSQQNLTKQTGLSKNASSIPRSESASKGLNQMN 2405
Query: 846 N----RERPASGRRGSRKDAGSSSHGDDQPA-SREDTWSSRTPSRSRWRSEQEHTLHESW 900
N ++ R S K +GS S ++P R+ T+ PS + R +E ES
Sbjct: 2406 NGNGANKKVELSRMSSTKSSGSESDRSERPVLVRQSTFIKEAPSPTLRRKLEESASFESL 2465
Query: 901 SSLSAFDRSHRGRISNTELPGDILDELLQQKSSRHS----DLPPS 941
S S R + L + D L SS + LPP+
Sbjct: 2466 SPSSRPASPTRSQAQTPVLSPSLPDMSLSTHSSVQAGGWRKLPPN 2510
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 36.2 bits (82), Expect = 0.26
Identities = 42/178 (23%), Positives = 63/178 (35%), Gaps = 29/178 (16%)
Query: 213 SEPEPED-----PALVGHPRHDRPPSSGDWTQKDVHGEQETEGRSSPGPDTLVVLEFNPA 267
S+P+P+ P V PR D P+ G + + + S P +L L PA
Sbjct: 261 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPA 320
Query: 268 SKSHKRERNLSAKRKDNAEVFVPTKPEPNLT---PQAP--AVFPDQERMCSRPGSRRERP 322
+ + +L + F+P+ P L PQAP P + S P S P
Sbjct: 321 TPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSP 380
Query: 323 LSATRKTLCEAEYPEEDASAVLQAIQVENAALQRALLSRKAEQPASPLQDAEGPPAKP 380
L+ + Q NA L + + P+ P+Q PPA P
Sbjct: 381 LAT-------------------PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 419
Score = 32.7 bits (73), Expect = 2.9
Identities = 42/183 (22%), Positives = 65/183 (35%), Gaps = 22/183 (12%)
Query: 217 PEDPALVGHPRHDRPPSSG---------DWTQKDVHGEQETEGRSSPGP--------DTL 259
PE G R RPP+SG + + V G + PGP
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 130
Query: 260 VVLEFNPASKSHKRERNLSAKRKDNAEVFVPTKPEPNLTPQAPAVFPDQERMCSRPGSRR 319
+ A+++ KR + R+D + P P P + ++ A + P +R
Sbjct: 131 ETVARGKATEAPKRSALSAGARRDTSGP-TPGTPSPAMARRSRAAGTEVGLPRPAPSARP 189
Query: 320 ERPLSATRKTLCEA-EYPEEDASAVLQAIQVENAALQRALLSRKAEQPASPLQD--AEGP 376
P RK++ A E+ + S + LQR SR A+PL GP
Sbjct: 190 RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP-ASRSLSSSATPLSSPARSGP 248
Query: 377 PAK 379
A+
Sbjct: 249 SAR 251
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
critical region 1 [Homo sapiens]
Length = 1400
Score = 36.2 bits (82), Expect = 0.26
Identities = 40/200 (20%), Positives = 74/200 (37%), Gaps = 19/200 (9%)
Query: 757 PSPTGKDRKQGGRKPKPLWLSPEKPLAWKGRLPSDDVIGEGPGETEARDKGLRH------ 810
PSP + + LSP +P + R +++ G TE R+
Sbjct: 361 PSPAEPTENRERTANENTTLSPAEPTENRERTANENTAPFPAGPTENREMTANENTTLFP 420
Query: 811 -EPGWGTSRSVNTKERPQRATTKVHSDDSDIFNQPPNRERPA--------SGRRGSRKDA 861
EP R+ N P A H + + N P+ P + + + A
Sbjct: 421 AEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDKTTSSSA 480
Query: 862 GSSSHGDDQPASREDTWSSRTPSRSRWRSEQEHTLHESWSSLSAFDRSHRGRISNTELPG 921
S+ HG+ P + E+T TPS + +E T +E+ + A +R +N +
Sbjct: 481 ESTEHGERTPLANENT----TPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTL 536
Query: 922 DILDELLQQKSSRHSDLPPS 941
++ ++++ + PS
Sbjct: 537 SPVEPTENRETTANEKTTPS 556
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,200,122
Number of Sequences: 37866
Number of extensions: 3759845
Number of successful extensions: 10984
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 10595
Number of HSP's gapped (non-prelim): 576
length of query: 1618
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1502
effective length of database: 13,855,062
effective search space: 20810303124
effective search space used: 20810303124
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.