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Search of human proteins with 19424138
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19424138 sperm acrosomal membrane protein 14 [Homo sapiens]
(124 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19424138 sperm acrosomal membrane protein 14 [Homo sapiens] 268 1e-72
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 38 0.002
gi|51243049 lymphocyte antigen 6 complex G6D [Homo sapiens] 37 0.005
gi|164698546 LY6/PLAUR domain containing 5 isoform A [Homo sapiens] 34 0.033
gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo sapiens] 34 0.033
gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 32 0.12
gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 32 0.12
gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ... 32 0.12
gi|239755901 PREDICTED: chromosome 12 open reading frame 64 [Hom... 32 0.16
gi|239750386 PREDICTED: chromosome 12 open reading frame 64 [Hom... 32 0.16
gi|239744688 PREDICTED: hypothetical protein LOC283310 [Homo sap... 32 0.16
gi|151301154 mucin 6, gastric [Homo sapiens] 31 0.21
gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] 30 0.36
gi|14192943 multiple EGF-like-domains 10 [Homo sapiens] 30 0.47
gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens] 30 0.47
gi|239757834 PREDICTED: hypothetical protein [Homo sapiens] 30 0.62
gi|239752345 PREDICTED: hypothetical protein XP_002348207 [Homo ... 30 0.62
gi|239746862 PREDICTED: hypothetical protein XP_002343861 [Homo ... 30 0.62
gi|239746858 PREDICTED: hypothetical protein XP_002343860 [Homo ... 30 0.62
gi|93004088 GPI-anchored metastasis-associated protein homolog [... 28 1.8
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 28 1.8
gi|226342935 podocan-like 1 isoform 3 [Homo sapiens] 27 4.0
gi|226342933 podocan-like 1 isoform 2 [Homo sapiens] 27 4.0
gi|226342931 podocan-like 1 isoform 1 [Homo sapiens] 27 4.0
gi|126012562 low density lipoprotein-related protein 1 [Homo sap... 27 4.0
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 27 4.0
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 27 4.0
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 27 4.0
gi|15451916 bone morphogenetic protein receptor type II precurso... 27 5.2
gi|14249180 wingless-type MMTV integration site family, member 5... 27 5.2
>gi|19424138 sperm acrosomal membrane protein 14 [Homo sapiens]
Length = 124
Score = 268 bits (684), Expect = 1e-72
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 1 MVLCWLLLLVMALPPGTTGVKDCVFCELTDSMQCPGTYMHCGDDEDCFTGHGVAPGTGPV 60
MVLCWLLLLVMALPPGTTGVKDCVFCELTDSMQCPGTYMHCGDDEDCFTGHGVAPGTGPV
Sbjct: 1 MVLCWLLLLVMALPPGTTGVKDCVFCELTDSMQCPGTYMHCGDDEDCFTGHGVAPGTGPV 60
Query: 61 INKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNRAPSSQTVGATTSLALGLGMLLP 120
INKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNRAPSSQTVGATTSLALGLGMLLP
Sbjct: 61 INKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNRAPSSQTVGATTSLALGLGMLLP 120
Query: 121 PRLL 124
PRLL
Sbjct: 121 PRLL 124
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 37.7 bits (86), Expect = 0.002
Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 2 VLCWLLLLVMALPPGTTGVKDCVFCELTDSMQCPGTYMHCGD-DEDCFTGHGVAPGTGPV 60
VL LL+ +AL PGT + C C+ S + +C E C+T A G V
Sbjct: 4 VLLALLMAGLALQPGTALL--CYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLTV 61
Query: 61 INKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNR--APSSQTVGATTSLALGLGML 118
I+KGC + +C + Y G CC LCN A + Q A +L LG+L
Sbjct: 62 ISKGC--SLNCVDDSQDYYVG---KKNITCCDTDLCNASGAHALQPAAAILALLPALGLL 116
Query: 119 L 119
L
Sbjct: 117 L 117
>gi|51243049 lymphocyte antigen 6 complex G6D [Homo sapiens]
Length = 133
Score = 36.6 bits (83), Expect = 0.005
Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
Query: 23 CVFCELTDSMQCPGTYMHCGDDEDCFTGHGVA-PGTGPVI----NKGCLRATSCGLEEPV 77
C C + S C CG+ + PG PV + C+ A C E
Sbjct: 24 CYNCGGSPSSSCKEAVTTCGEGRPQPGLEQIKLPGNPPVTLIHQHPACVAAHHCNQVETE 83
Query: 78 SYRGVTYSLTTNCCTGRLCNRAPSSQT--VGATTSLALGLGMLLP 120
S VTY +C G LCN A +S G + A L LLP
Sbjct: 84 SVGDVTYPAHRDCYLGDLCNSAVASHVAPAGILAAAATALTCLLP 128
>gi|164698546 LY6/PLAUR domain containing 5 isoform A [Homo sapiens]
Length = 251
Score = 33.9 bits (76), Expect = 0.033
Identities = 39/127 (30%), Positives = 48/127 (37%), Gaps = 13/127 (10%)
Query: 9 LVMALPPGTTGVKDCVFCELTDSMQCP---GTYMHCGDDED-CFTGHG---VAPGTGPVI 61
L A P T +C C C + C D+ CF G+G V + PV
Sbjct: 121 LSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVY 180
Query: 62 NKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNR----APSSQTVGATTSLALGLGM 117
+ C R SC E S L +CC G LCNR P + T AL +
Sbjct: 181 IRTCHRP-SCTTEGTTS-PWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPPRALQVLA 238
Query: 118 LLPPRLL 124
LL P LL
Sbjct: 239 LLLPVLL 245
>gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo sapiens]
Length = 208
Score = 33.9 bits (76), Expect = 0.033
Identities = 39/127 (30%), Positives = 48/127 (37%), Gaps = 13/127 (10%)
Query: 9 LVMALPPGTTGVKDCVFCELTDSMQCP---GTYMHCGDDED-CFTGHG---VAPGTGPVI 61
L A P T +C C C + C D+ CF G+G V + PV
Sbjct: 78 LSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVY 137
Query: 62 NKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNR----APSSQTVGATTSLALGLGM 117
+ C R SC E S L +CC G LCNR P + T AL +
Sbjct: 138 IRTCHRP-SCTTEGTTS-PWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPPRALQVLA 195
Query: 118 LLPPRLL 124
LL P LL
Sbjct: 196 LLLPVLL 202
>gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 32.0 bits (71), Expect = 0.12
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 6 LLLLVMALPPGTTGVKDCVFCELTDSMQCPGTYMHCGD-DEDCFTGHGVAPGTGPVINKG 64
LLL+++ L + + C + + + + C D+ C +PG G
Sbjct: 3 LLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPG-------G 55
Query: 65 CLRATSCGLEEPVS-YRGVTYSLTTNCCTGRLCNRAPSSQTVGATTSL 111
L SC P S + +L+ +CC G CNR+ ++ VG+ +L
Sbjct: 56 ILVMKSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTL 103
>gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 32.0 bits (71), Expect = 0.12
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 6 LLLLVMALPPGTTGVKDCVFCELTDSMQCPGTYMHCGD-DEDCFTGHGVAPGTGPVINKG 64
LLL+++ L + + C + + + + C D+ C +PG G
Sbjct: 3 LLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPG-------G 55
Query: 65 CLRATSCGLEEPVS-YRGVTYSLTTNCCTGRLCNRAPSSQTVGATTSL 111
L SC P S + +L+ +CC G CNR+ ++ VG+ +L
Sbjct: 56 ILVMKSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTL 103
>gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo
sapiens]
Length = 190
Score = 32.0 bits (71), Expect = 0.12
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 6 LLLLVMALPPGTTGVKDCVFCELTDSMQCPGTYMHCGD-DEDCFTGHGVAPGTGPVINKG 64
LLL+++ L + + C + + + + C D+ C +PG G
Sbjct: 3 LLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPG-------G 55
Query: 65 CLRATSCGLEEPVS-YRGVTYSLTTNCCTGRLCNRAPSSQTVGATTSL 111
L SC P S + +L+ +CC G CNR+ ++ VG+ +L
Sbjct: 56 ILVMKSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTL 103
>gi|239755901 PREDICTED: chromosome 12 open reading frame 64 [Homo
sapiens]
Length = 2250
Score = 31.6 bits (70), Expect = 0.16
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 17/82 (20%)
Query: 21 KDCVFC---ELTDSMQCPGTYMHCGDDEDCFTGHGVAPGTGPVINKGCLRATSCGLEEPV 77
+DC+ C T QC G+ +HC D C+ G+ G C+ +C P
Sbjct: 338 RDCISCCPPTCTFEKQCLGSNLHCLD--GCYCPDGLVMDNGT-----CISLENC----PC 386
Query: 78 SYRGVTYSLTTNC---CTGRLC 96
+ G+ YS+ + CT +C
Sbjct: 387 GFHGLAYSVGSKIEQECTECVC 408
>gi|239750386 PREDICTED: chromosome 12 open reading frame 64 [Homo
sapiens]
Length = 2250
Score = 31.6 bits (70), Expect = 0.16
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 17/82 (20%)
Query: 21 KDCVFC---ELTDSMQCPGTYMHCGDDEDCFTGHGVAPGTGPVINKGCLRATSCGLEEPV 77
+DC+ C T QC G+ +HC D C+ G+ G C+ +C P
Sbjct: 338 RDCISCCPPTCTFEKQCLGSNLHCLD--GCYCPDGLVMDNGT-----CISLENC----PC 386
Query: 78 SYRGVTYSLTTNC---CTGRLC 96
+ G+ YS+ + CT +C
Sbjct: 387 GFHGLAYSVGSKIEQECTECVC 408
>gi|239744688 PREDICTED: hypothetical protein LOC283310 [Homo
sapiens]
Length = 2250
Score = 31.6 bits (70), Expect = 0.16
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 17/82 (20%)
Query: 21 KDCVFC---ELTDSMQCPGTYMHCGDDEDCFTGHGVAPGTGPVINKGCLRATSCGLEEPV 77
+DC+ C T QC G+ +HC D C+ G+ G C+ +C P
Sbjct: 338 RDCISCCPPTCTFEKQCLGSNLHCLD--GCYCPDGLVMDNGT-----CISLENC----PC 386
Query: 78 SYRGVTYSLTTNC---CTGRLC 96
+ G+ YS+ + CT +C
Sbjct: 387 GFHGLAYSVGSKIEQECTECVC 408
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 31.2 bits (69), Expect = 0.21
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 6/95 (6%)
Query: 11 MALPPGTTGVKDCVFCELTDSMQCPGTYMHCGDDEDCFTGHGVAPGTGPVINKGCLRATS 70
++L G TG+ LT P T HG P + PV + G TS
Sbjct: 2286 VSLTSGVTGIPTSPVTNLTTRHPGPTLSPTTRFLTSSLTAHGSTPASAPVSSLGTPTPTS 2345
Query: 71 CGL------EEPVSYRGVTYSLTTNCCTGRLCNRA 99
G+ +E ++++G ++T C G + A
Sbjct: 2346 PGVCSVREQQEEITFKGCMANVTVTRCEGACISAA 2380
>gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
Length = 125
Score = 30.4 bits (67), Expect = 0.36
Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 21/106 (19%)
Query: 15 PGTTGVKDCVFCEL--TDSMQCPGTYMHCGDDEDCFTGHGVAPGTGP-VINKGCLRATSC 71
P TGV DCV T+ C T ++ V P G + K C A+ C
Sbjct: 29 PEPTGVSDCVTIATCTTNETMCKTTL---------YSREIVYPFQGDSTVTKSC--ASKC 77
Query: 72 GLEEPVSYRGVTYSLTTNCCTGRLCN----RAPSSQTVGATTSLAL 113
+P G+ +L +CC LCN A +S GA T L L
Sbjct: 78 ---KPSDVDGIGQTLPVSCCNTELCNVDGAPALNSLHCGALTLLPL 120
>gi|14192943 multiple EGF-like-domains 10 [Homo sapiens]
Length = 1140
Score = 30.0 bits (66), Expect = 0.47
Identities = 25/85 (29%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 15 PGTTGVKDCVFCELTDSMQCP-GTY-MHCGDDEDCFTGHGVAPGTGPVINKGCLRATSCG 72
PG G+ DC S CP GTY ++C C +P G K C
Sbjct: 432 PGFKGI-DC-------STPCPLGTYGINCSSRCGCKNDAVCSPVDGSCTCKAGWHGVDCS 483
Query: 73 LEEPVSYRGVTYSLTTNCCTGRLCN 97
+ P G +LT C G CN
Sbjct: 484 IRCPSGTWGFGCNLTCQCLNGGACN 508
>gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens]
Length = 171
Score = 30.0 bits (66), Expect = 0.47
Identities = 37/139 (26%), Positives = 52/139 (37%), Gaps = 32/139 (23%)
Query: 3 LCWLLLL-------------------VMALPPGTT---GVKDCVFCE-LTDSMQC----P 35
L WLLLL ++ L P TT G C CE D+ +C P
Sbjct: 7 LAWLLLLSLLADCLKAAQSRDFTVKDIIYLHPSTTPYPGGFKCFTCEKAADNYECNRWAP 66
Query: 36 GTYMHCGDDEDCFTGHGV-APGTGPVINKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGR 94
Y + C+T H + G + K C+ C + + T+CC G
Sbjct: 67 DIYCP-RETRYCYTQHTMEVTGNSISVTKRCVPLEECLSTGCRDSEHEGHKVCTSCCEGN 125
Query: 95 LCN-RAPSSQT--VGATTS 110
+CN P ++T ATTS
Sbjct: 126 ICNLPLPRNETDATFATTS 144
>gi|239757834 PREDICTED: hypothetical protein [Homo sapiens]
Length = 87
Score = 29.6 bits (65), Expect = 0.62
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 36 GTYMHCGDDEDCFTGHGVAPGTGPVINKGCLRAT--SCGLEEPVS 78
GT + G D CF+ HG+ PGTG N G T SC L VS
Sbjct: 10 GTCIGAGADA-CFS-HGIGPGTGTGTNTGTCHVTNGSCHLGHGVS 52
>gi|239752345 PREDICTED: hypothetical protein XP_002348207 [Homo
sapiens]
Length = 87
Score = 29.6 bits (65), Expect = 0.62
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 36 GTYMHCGDDEDCFTGHGVAPGTGPVINKGCLRAT--SCGLEEPVS 78
GT + G D CF+ HG+ PGTG N G T SC L VS
Sbjct: 10 GTCIGAGADA-CFS-HGIGPGTGTGTNTGTCHVTNGSCHLGHGVS 52
>gi|239746862 PREDICTED: hypothetical protein XP_002343861 [Homo
sapiens]
Length = 87
Score = 29.6 bits (65), Expect = 0.62
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 36 GTYMHCGDDEDCFTGHGVAPGTGPVINKGCLRAT--SCGLEEPVS 78
GT + G D CF+ HG+ PGTG N G T SC L VS
Sbjct: 10 GTCIGAGADA-CFS-HGIGPGTGTGTNTGTCHVTNGSCHLGHGVS 52
>gi|239746858 PREDICTED: hypothetical protein XP_002343860 [Homo
sapiens]
Length = 87
Score = 29.6 bits (65), Expect = 0.62
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 36 GTYMHCGDDEDCFTGHGVAPGTGPVINKGCLRAT--SCGLEEPVS 78
GT + G D CF+ HG+ PGTG N G T SC L VS
Sbjct: 10 GTCIGAGADA-CFS-HGIGPGTGTGTNTGTCHVTNGSCHLGHGVS 52
>gi|93004088 GPI-anchored metastasis-associated protein homolog
[Homo sapiens]
Length = 346
Score = 28.1 bits (61), Expect = 1.8
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 17/97 (17%)
Query: 12 ALPPGTTGVKDCVFCELTDSMQCPGT---YMHCGDDED-----CFTGHGVAPGTGPVIN- 62
A PP GV +C C C GT + C + D CF G+ ++
Sbjct: 132 AYPPN--GV-ECYSCVGLSREACQGTSPPVVSCYNASDHVYKGCFDGNVTLTAANVTVSL 188
Query: 63 --KGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCN 97
+GC++ C + G ++L+ +CC G CN
Sbjct: 189 PVRGCVQDEFCTRD---GVTGPGFTLSGSCCQGSRCN 222
>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
Length = 1541
Score = 28.1 bits (61), Expect = 1.8
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 33 QCPGTYMHCGDDEDCFTGHGVAPG--TGPVINKGCLRATSCGLEEPVSYRGVTYSLTTNC 90
QCP + G ++ C HG A +G R T C P + G+ NC
Sbjct: 903 QCPQGHFGPGCEQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSACNC 962
Query: 91 CTGRLCNRAPSS 102
G C+ S
Sbjct: 963 TAGAACDAVNGS 974
>gi|226342935 podocan-like 1 isoform 3 [Homo sapiens]
Length = 421
Score = 26.9 bits (58), Expect = 4.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 LLLLVMALPPGTTGVKDCVFCELTDSMQ 33
LLLL++ PP G++D F L +S+Q
Sbjct: 11 LLLLLLPGPPPVAGLEDAAFPHLGESLQ 38
>gi|226342933 podocan-like 1 isoform 2 [Homo sapiens]
Length = 510
Score = 26.9 bits (58), Expect = 4.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 LLLLVMALPPGTTGVKDCVFCELTDSMQ 33
LLLL++ PP G++D F L +S+Q
Sbjct: 11 LLLLLLPGPPPVAGLEDAAFPHLGESLQ 38
>gi|226342931 podocan-like 1 isoform 1 [Homo sapiens]
Length = 512
Score = 26.9 bits (58), Expect = 4.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 LLLLVMALPPGTTGVKDCVFCELTDSMQ 33
LLLL++ PP G++D F L +S+Q
Sbjct: 13 LLLLLLPGPPPVAGLEDAAFPHLGESLQ 40
>gi|126012562 low density lipoprotein-related protein 1 [Homo sapiens]
Length = 4544
Score = 26.9 bits (58), Expect = 4.0
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 12/47 (25%)
Query: 31 SMQCPGTYM------HCGDDEDCFTGHGVAPGTGPVINKGCLRATSC 71
S CPGT++ C D+DC A G I GCL ++C
Sbjct: 2778 SFSCPGTHVCVPERWLCDGDKDC------ADGADESIAAGCLYNSTC 2818
>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 26.9 bits (58), Expect = 4.0
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 23/123 (18%)
Query: 2 VLCWLLLLVMALPPGTTGVKDCVFCELT-----DSMQCPGTYMHCGDDEDCFTGHGVAPG 56
+L +L+++M LP DC C + M+CP +C +T
Sbjct: 4 LLTLILVVLMGLP--LAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTP------ 55
Query: 57 TGPVINKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNRAPSSQTVGATTSLALGLG 116
T ++K C+ + + S ++ TT+CC LCN G T L L
Sbjct: 56 TRMKVSKSCVPRCFETVYDGYS----KHASTTSCCQYDLCN------GTGLATPATLALA 105
Query: 117 MLL 119
+L
Sbjct: 106 PIL 108
>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 26.9 bits (58), Expect = 4.0
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 23/123 (18%)
Query: 2 VLCWLLLLVMALPPGTTGVKDCVFCELT-----DSMQCPGTYMHCGDDEDCFTGHGVAPG 56
+L +L+++M LP DC C + M+CP +C +T
Sbjct: 4 LLTLILVVLMGLP--LAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTP------ 55
Query: 57 TGPVINKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNRAPSSQTVGATTSLALGLG 116
T ++K C+ + + S ++ TT+CC LCN G T L L
Sbjct: 56 TRMKVSKSCVPRCFETVYDGYS----KHASTTSCCQYDLCN------GTGLATPATLALA 105
Query: 117 MLL 119
+L
Sbjct: 106 PIL 108
>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 26.9 bits (58), Expect = 4.0
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 23/123 (18%)
Query: 2 VLCWLLLLVMALPPGTTGVKDCVFCELT-----DSMQCPGTYMHCGDDEDCFTGHGVAPG 56
+L +L+++M LP DC C + M+CP +C +T
Sbjct: 4 LLTLILVVLMGLP--LAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTP------ 55
Query: 57 TGPVINKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNRAPSSQTVGATTSLALGLG 116
T ++K C+ + + S ++ TT+CC LCN G T L L
Sbjct: 56 TRMKVSKSCVPRCFETVYDGYS----KHASTTSCCQYDLCN------GTGLATPATLALA 105
Query: 117 MLL 119
+L
Sbjct: 106 PIL 108
>gi|15451916 bone morphogenetic protein receptor type II precursor
[Homo sapiens]
Length = 1038
Score = 26.6 bits (57), Expect = 5.2
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 36 GTYMHCGDDEDCFTGHGVAPGTGPVINKGCLRATSCGLE 74
G + H GD ++C V T P I G R C +
Sbjct: 83 GCWSHIGDPQECHYEECVVTTTPPSIQNGTYRFCCCSTD 121
>gi|14249180 wingless-type MMTV integration site family, member 5B
precursor [Homo sapiens]
Length = 359
Score = 26.6 bits (57), Expect = 5.2
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 10/65 (15%)
Query: 18 TGVKDCVF--------CELTDSMQCPGTYMHCGDDEDCFTGHGVAPGTGPVINKGCLRA- 68
TG+K+C C D+ G M G E FT A G I++ C
Sbjct: 78 TGIKECQHQFRQRRWNCSTADNASVFGRVMQIGSRETAFTHAVSAAGVVNAISRACREGE 137
Query: 69 -TSCG 72
++CG
Sbjct: 138 LSTCG 142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.140 0.468
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,980,974
Number of Sequences: 37866
Number of extensions: 275047
Number of successful extensions: 541
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 520
Number of HSP's gapped (non-prelim): 45
length of query: 124
length of database: 18,247,518
effective HSP length: 89
effective length of query: 35
effective length of database: 14,877,444
effective search space: 520710540
effective search space used: 520710540
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.