Guide to the Human Genome
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Name: LY6G6D Sequence: fasta or formatted (133aa) NCBI GI: 51243049
Description:

lymphocyte antigen 6 complex G6D

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         16           4
 C cysteine            6.8          9           1
 D aspartate           2.3          3           1
 E glutamate           3.8          5           1
 F phenylalanine       0.8          1           1
 G glycine            10.5         14           2
 H histidine           4.5          6           2
 I isoleucine          3.0          4           1
 K lysine              2.3          3           1
 L leucine            11.3         15           2
 M methionine          1.5          2           1
 N asparagine          3.8          5           1
 P proline             8.3         11           2
 Q glutamine           3.8          5           1
 R arginine            3.0          4           1
 S serine              7.5         10           3
 T threonine           5.3          7           2
 V valine              6.8          9           1
 W tryptophan          0.8          1           1
 Y tyrosine            2.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lymphocyte antigen 6 complex G6D 
SPACA4                0.047   sperm acrosomal membrane protein 14 
PHLPP1                0.016   PH domain and leucine rich repeat protein phosphatas...
CSMD3                 0.016   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.016   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.016   CUB and Sushi multiple domains 3 isoform 1 
CD59                  0.012   CD59 antigen preproprotein 
CD59                  0.012   CD59 antigen preproprotein 
CD59                  0.012   CD59 antigen preproprotein 
CD59                  0.012   CD59 antigen preproprotein 
CD59                  0.012   CD59 antigen preproprotein 
CD59                  0.012   CD59 antigen preproprotein 
CD59                  0.012   CD59 antigen preproprotein 
CD59                  0.012   CD59 antigen preproprotein 
LY6E                  0.012   lymphocyte antigen 6 complex, locus E 
LY6E                  0.012   lymphocyte antigen 6 complex, locus E 
IKZF5                 0.012   zinc finger protein, subfamily 1A, 5 
TTC39A                0.012   tetratricopeptide repeat domain 39A isoform 2 [Homo...
MLL2                  0.012   myeloid/lymphoid or mixed-lineage leukemia 2 
SCARF2                0.012   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.012   scavenger receptor class F, member 2 isoform 2 [Homo...
KRTAP13-3             0.012   keratin associated protein 13-3 
LOC100133744          0.012   PREDICTED: similar to EF-hand calcium binding domai...
CSMD1                 0.012   CUB and Sushi multiple domains 1 
ACPL2                 0.012   acid phosphatase-like 2 
ACPL2                 0.012   acid phosphatase-like 2 
LRCH4                 0.012   leucine-rich repeats and calponin homology (CH) doma...
PSCA                  0.008   prostate stem cell antigen preproprotein 
C1RL                  0.008   complement component 1, r subcomponent-like precursor...
HLA-E                 0.008   major histocompatibility complex, class I, E precurs...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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