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Search of human proteins with 194097475
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194097475 izumo sperm-egg fusion 1 [Homo sapiens]
(350 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194097475 izumo sperm-egg fusion 1 [Homo sapiens] 712 0.0
gi|63999117 hypothetical protein LOC126123 [Homo sapiens] 39 0.007
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact... 37 0.026
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 37 0.026
gi|144226847 obscurin-like 1 [Homo sapiens] 37 0.035
gi|110349719 titin isoform N2-A [Homo sapiens] 34 0.17
gi|157168355 CD22 molecule [Homo sapiens] 33 0.29
gi|139948432 adlican [Homo sapiens] 32 0.65
gi|50086624 integrator complex subunit 4 [Homo sapiens] 32 0.65
gi|148596957 myosin binding protein C, cardiac [Homo sapiens] 32 0.85
gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens] 32 0.85
gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens] 32 0.85
gi|145275170 kin of IRRE-like 2 isoform a [Homo sapiens] 32 0.85
gi|153791466 AMIGO protein [Homo sapiens] 32 0.85
gi|110349717 titin isoform novex-2 [Homo sapiens] 31 1.4
gi|110349713 titin isoform novex-1 [Homo sapiens] 31 1.4
gi|110349715 titin isoform N2-B [Homo sapiens] 31 1.4
gi|88758596 TEK tyrosine kinase, endothelial precursor [Homo sap... 31 1.9
gi|9507203 triggering receptor expressed on myeloid cells 2 prec... 31 1.9
gi|89903023 hypothetical protein LOC113177 isoform 3 [Homo sapiens] 31 1.9
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 30 2.5
gi|24111244 MAM domain containing glycosylphosphatidylinositol a... 30 2.5
gi|89903025 hypothetical protein LOC113177 isoform 1 [Homo sapiens] 30 2.5
gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo... 30 4.2
gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo ... 30 4.2
gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo s... 30 4.2
gi|118572606 hemicentin 1 [Homo sapiens] 30 4.2
gi|11225258 myelin associated glycoprotein isoform a precursor [... 30 4.2
gi|18104957 myelin associated glycoprotein isoform b precursor [... 30 4.2
gi|169214831 PREDICTED: zinc finger protein 840 [Homo sapiens] 29 5.5
>gi|194097475 izumo sperm-egg fusion 1 [Homo sapiens]
Length = 350
Score = 712 bits (1839), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MGPHFTLLCAALAGCLLPAEGCVICDPSVVLALKSLEKDYLPGHLDAKHHKAMMERVENA 60
MGPHFTLLCAALAGCLLPAEGCVICDPSVVLALKSLEKDYLPGHLDAKHHKAMMERVENA
Sbjct: 1 MGPHFTLLCAALAGCLLPAEGCVICDPSVVLALKSLEKDYLPGHLDAKHHKAMMERVENA 60
Query: 61 VKDFQELSLNEDAYMGVVDEATLQKGSWSLLKDLKRITDSDVKGDLFVKELFWMLHLQKE 120
VKDFQELSLNEDAYMGVVDEATLQKGSWSLLKDLKRITDSDVKGDLFVKELFWMLHLQKE
Sbjct: 61 VKDFQELSLNEDAYMGVVDEATLQKGSWSLLKDLKRITDSDVKGDLFVKELFWMLHLQKE 120
Query: 121 TFATYVARFQKEAYCPNKCGVMLQTLIWCKNCKKEVHACRKSYDCGERNVEVPQMEDMIL 180
TFATYVARFQKEAYCPNKCGVMLQTLIWCKNCKKEVHACRKSYDCGERNVEVPQMEDMIL
Sbjct: 121 TFATYVARFQKEAYCPNKCGVMLQTLIWCKNCKKEVHACRKSYDCGERNVEVPQMEDMIL 180
Query: 181 DCELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNS 240
DCELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNS
Sbjct: 181 DCELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNS 240
Query: 241 SPATIINFHVTVLPKMIKEEKPSPNIVTPGEATTESSISLQPLQPEKMLASRLLGLLICG 300
SPATIINFHVTVLPKMIKEEKPSPNIVTPGEATTESSISLQPLQPEKMLASRLLGLLICG
Sbjct: 241 SPATIINFHVTVLPKMIKEEKPSPNIVTPGEATTESSISLQPLQPEKMLASRLLGLLICG 300
Query: 301 SLALITGLTFAIFRRRKVIDFIKSSLFGLGSGAAEQTQVPKEKATDSRQQ 350
SLALITGLTFAIFRRRKVIDFIKSSLFGLGSGAAEQTQVPKEKATDSRQQ
Sbjct: 301 SLALITGLTFAIFRRRKVIDFIKSSLFGLGSGAAEQTQVPKEKATDSRQQ 350
>gi|63999117 hypothetical protein LOC126123 [Homo sapiens]
Length = 221
Score = 38.9 bits (89), Expect = 0.007
Identities = 32/155 (20%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 21 GCVICDPSVVLALKSLEKDYLPGHLDAKHHKAMMERVENAVKD--FQELSLNEDAYMGVV 78
GC+ CDP V+ AL L +P + +A V ++ F++ +LN ++G V
Sbjct: 20 GCLQCDPLVLEALGHLRSALIPSRFQLEQLQARAGAVLMGMEGPFFRDYALN--VFVGKV 77
Query: 79 DEATLQKGSWSLLKDLKRITDSDVKGDLFVKELFWMLHLQKETFATYVARFQKEAYCPNK 138
+ L + + + + + +K + ++EL + + F + ++ +A P
Sbjct: 78 ETNQLDLVASFVKNQTQHLMGNSLKDEPLLEELVTLRANVIKEFKKVLISYELKACNPKL 137
Query: 139 CGVMLQTLIWCKNCKKEVHAC-RKSYDCGERNVEV 172
C ++ + ++ C +C++ C K Y +R V
Sbjct: 138 CRLLKEEVLDCLHCQRITPKCIHKKYCFVDRQPRV 172
>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform a [Homo sapiens]
Length = 6620
Score = 37.0 bits (84), Expect = 0.026
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 179 ILDCELNWHQASEGLTDYSFYRVWGNNTET-LVSKGKEATLTKPMVGPEDAGSYRCELGS 237
+L CE+ QA +T Y + ++++ + KG L P G DAG Y CE G
Sbjct: 1093 MLSCEVA--QAQTEVTWYKDGKKLSSSSKVGMEVKGCTRRLVLPQAGKADAGEYSCEAGG 1150
Query: 238 VNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGEATTESSISLQPLQPE 286
S + H+T PK + ++ S + EA T + +S + QP+
Sbjct: 1151 QRVS----FHLHITE-PKGVFAKEQSVHNEVQAEAGTTAMLSCEVAQPQ 1194
Score = 36.6 bits (83), Expect = 0.035
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 183 ELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSP 242
E+ WH+ E R+ +VS+G++ L ED G Y C L + P
Sbjct: 4653 EVIWHKGME--------RIQPGGRFEVVSQGRQQMLVIKGFTAEDQGEYHCGLAQGSICP 4704
Query: 243 ATIINFHVTVLPKMIKEEKPSPNIVTPGEATTESSISL 280
A F V + P + +E P P++ P EA E + L
Sbjct: 4705 AA-ATFQVALSPASV-DEAPQPSL--PPEAAQEGDLHL 4738
Score = 34.3 bits (77), Expect = 0.17
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 208 TLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIV 267
T+ S ++ +L VG + G+Y C + + HV+ LPK+ ++EK ++
Sbjct: 5424 TVASSAQQHSLVLLDVGRQHQGTYTCIASNAAGQALCSASLHVSGLPKVEEQEKVKEALI 5483
Query: 268 TPGEATTESSISLQPLQ 284
+ T +IS Q L+
Sbjct: 5484 STFLQGTTQAISAQGLE 5500
Score = 30.0 bits (66), Expect = 3.2
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 15/106 (14%)
Query: 183 ELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSP 242
E+ W++ + L+ S R + KG L VG DAG Y CE G S
Sbjct: 1196 EVTWYKDGKKLSSSSKVR--------MEVKGCTRRLVVQQVGKADAGEYSCEAGGQRVS- 1246
Query: 243 ATIINFHVTVLPKMI--KEEKPSPNIVTPGEATTESSISLQPLQPE 286
H+T PK + KE+ + T A+ S + Q E
Sbjct: 1247 ---FQLHITE-PKAVFAKEQLVHNEVRTEAGASATLSCEVAQAQTE 1288
Score = 29.3 bits (64), Expect = 5.5
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 179 ILDCELN-------WHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSY 231
+L+C+++ W + S+ L Y LVS G L V ED +Y
Sbjct: 2308 VLECQVSRASAQVRWFKGSQELQPGPKYE--------LVSDGLYRKLIISDVHAEDEDTY 2359
Query: 232 RCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGEATTESSISLQPLQPEKMLAS 291
C+ G V +S + + + +++ ++ P A E S+ ++P K L
Sbjct: 2360 TCDAGDVKTSAQFFVEEQSITIVRGLQD----VTVMEPAPAWFECETSIPSVRPPKWLLG 2415
Query: 292 R 292
+
Sbjct: 2416 K 2416
Score = 29.3 bits (64), Expect = 5.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 212 KGKEATLTKPMVGPEDAGSYRCELGSVNSS 241
+G+ A L + P DAG YRC+ GS +SS
Sbjct: 2519 EGQMAELRILRLMPADAGVYRCQAGSAHSS 2548
Score = 28.9 bits (63), Expect = 7.2
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 169 NVEVPQMEDMILDCELNWHQASEGLTDYSFYRVWGNN-TETLVSKGKEATLTKPMVGPED 227
+ EV ED+ CE++ A+ + N TE V G+ TL V PED
Sbjct: 4167 DAEVTADEDVEFSCEVSRAGATGVQWCLQGLPLQSNEVTEVAVRDGRIHTLRLKGVTPED 4226
Query: 228 AGSYRCELGS-VNSSPATIINFHVTVL 253
AG+ LG+ +S+ T+ VT+L
Sbjct: 4227 AGTVSFHLGNHASSAQLTVRAPEVTIL 4253
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 37.0 bits (84), Expect = 0.026
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 179 ILDCELNWHQASEGLTDYSFYRVWGNNTET-LVSKGKEATLTKPMVGPEDAGSYRCELGS 237
+L CE+ QA +T Y + ++++ + KG L P G DAG Y CE G
Sbjct: 1093 MLSCEVA--QAQTEVTWYKDGKKLSSSSKVGMEVKGCTRRLVLPQAGKADAGEYSCEAGG 1150
Query: 238 VNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGEATTESSISLQPLQPE 286
S + H+T PK + ++ S + EA T + +S + QP+
Sbjct: 1151 QRVS----FHLHITE-PKGVFAKEQSVHNEVQAEAGTTAMLSCEVAQPQ 1194
Score = 36.6 bits (83), Expect = 0.035
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 183 ELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSP 242
E+ WH+ E R+ +VS+G++ L ED G Y C L + P
Sbjct: 4653 EVIWHKGME--------RIQPGGRFEVVSQGRQQMLVIKGFTAEDQGEYHCGLAQGSICP 4704
Query: 243 ATIINFHVTVLPKMIKEEKPSPNIVTPGEATTESSISL 280
A F V + P + +E P P++ P EA E + L
Sbjct: 4705 AA-ATFQVALSPASV-DEAPQPSL--PPEAAQEGDLHL 4738
Score = 34.3 bits (77), Expect = 0.17
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 208 TLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIV 267
T+ S ++ +L VG + G+Y C + + HV+ LPK+ ++EK ++
Sbjct: 5424 TVASSAQQHSLVLLDVGRQHQGTYTCIASNAAGQALCSASLHVSGLPKVEEQEKVKEALI 5483
Query: 268 TPGEATTESSISLQPLQ 284
+ T +IS Q L+
Sbjct: 5484 STFLQGTTQAISAQGLE 5500
Score = 30.0 bits (66), Expect = 3.2
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 15/106 (14%)
Query: 183 ELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSP 242
E+ W++ + L+ S R + KG L VG DAG Y CE G S
Sbjct: 1196 EVTWYKDGKKLSSSSKVR--------MEVKGCTRRLVVQQVGKADAGEYSCEAGGQRVS- 1246
Query: 243 ATIINFHVTVLPKMI--KEEKPSPNIVTPGEATTESSISLQPLQPE 286
H+T PK + KE+ + T A+ S + Q E
Sbjct: 1247 ---FQLHITE-PKAVFAKEQLVHNEVRTEAGASATLSCEVAQAQTE 1288
Score = 29.3 bits (64), Expect = 5.5
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 179 ILDCELN-------WHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSY 231
+L+C+++ W + S+ L Y LVS G L V ED +Y
Sbjct: 2308 VLECQVSRASAQVRWFKGSQELQPGPKYE--------LVSDGLYRKLIISDVHAEDEDTY 2359
Query: 232 RCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGEATTESSISLQPLQPEKMLAS 291
C+ G V +S + + + +++ ++ P A E S+ ++P K L
Sbjct: 2360 TCDAGDVKTSAQFFVEEQSITIVRGLQD----VTVMEPAPAWFECETSIPSVRPPKWLLG 2415
Query: 292 R 292
+
Sbjct: 2416 K 2416
Score = 29.3 bits (64), Expect = 5.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 212 KGKEATLTKPMVGPEDAGSYRCELGSVNSS 241
+G+ A L + P DAG YRC+ GS +SS
Sbjct: 2519 EGQMAELRILRLMPADAGVYRCQAGSAHSS 2548
Score = 28.9 bits (63), Expect = 7.2
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 169 NVEVPQMEDMILDCELNWHQASEGLTDYSFYRVWGNN-TETLVSKGKEATLTKPMVGPED 227
+ EV ED+ CE++ A+ + N TE V G+ TL V PED
Sbjct: 4167 DAEVTADEDVEFSCEVSRAGATGVQWCLQGLPLQSNEVTEVAVRDGRIHTLRLKGVTPED 4226
Query: 228 AGSYRCELGS-VNSSPATIINFHVTVL 253
AG+ LG+ +S+ T+ VT+L
Sbjct: 4227 AGTVSFHLGNHASSAQLTVRAPEVTIL 4253
>gi|144226847 obscurin-like 1 [Homo sapiens]
Length = 1896
Score = 36.6 bits (83), Expect = 0.035
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 209 LVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIK----EEKPSP 264
L ++G TLT P PEDAG Y CE + I F+V + ++ E PSP
Sbjct: 1129 LGAEGPTRTLTLPHAQPEDAGEYVCE------TRHEAITFNVILAEPPVQFLALETTPSP 1182
Query: 265 NIVTPGE 271
V PGE
Sbjct: 1183 LCVAPGE 1189
Score = 33.9 bits (76), Expect = 0.22
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 15/87 (17%)
Query: 166 GERNVEVPQMEDMILDCELN-------WHQASEGLTDYSFYRVWGNNTETLVSKGKEATL 218
G ++EV + + +CEL+ W + LT R+ T L+ +
Sbjct: 1634 GPHDLEVTEGDTATFECELSQALADVTWEKDGNALTPSPRLRLQALGTRRLLQLRR---- 1689
Query: 219 TKPMVGPEDAGSYRCELGSVNSSPATI 245
GP DAG+Y C +G+ + P +
Sbjct: 1690 ----CGPSDAGTYSCAVGTARAGPVRL 1712
Score = 30.4 bits (67), Expect = 2.5
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 34/129 (26%)
Query: 163 YDCGERNVEVPQMEDMILDCEL--NWHQASEGLTDYSFYRVWGNNTETLVSKG-----KE 215
Y G+ V ++E ++L CEL W + W + E +V KE
Sbjct: 901 YPSGKVYVAAVRLERVVLTCELCRPWAEVR-----------WTKDGEEVVESPALLLQKE 949
Query: 216 ATLTK---PMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGEA 272
T+ + P V ED+G Y CE+ ++S F VTV +P I+ P +
Sbjct: 950 DTVRRLVLPAVQLEDSGEYLCEIDDESAS------FTVTV-------TEPPVRIIYPRDE 996
Query: 273 TTESSISLQ 281
T +++L+
Sbjct: 997 VTLIAVTLE 1005
Score = 29.3 bits (64), Expect = 5.5
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 26/107 (24%)
Query: 176 EDMILDCELNWHQASEGLTDYSFYRVWGNNTET--------LVSKGKEATLTKPMVGPED 227
E ++L CEL+ A VW +N L ++G L GP
Sbjct: 1189 EPVVLSCELSRAGAPV---------VWSHNGRPVQEGEGLELHAEGPRRVLCIQAAGPAH 1239
Query: 228 AGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGEATT 274
AG Y C+ G+ +P+ ++F V V +P +V P A T
Sbjct: 1240 AGLYTCQSGAAPGAPS--LSFTVQV-------AEPPVRVVAPEAAQT 1277
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 34.3 bits (77), Expect = 0.17
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 200 RVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKE 259
R GN TLV ATLT VG DAG Y C ++ + V P+ IK+
Sbjct: 7253 RPGGNYKMTLVEN--TATLTVLKVGKGDAGQYTCYASNIAGKDSCSAQLGVQEPPRFIKK 7310
Query: 260 EKPSPNIVTPGEAT 273
+PS IV E T
Sbjct: 7311 LEPS-RIVKQDEFT 7323
Score = 31.2 bits (69), Expect = 1.4
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Query: 169 NVEVPQMEDMILDCELN-------WHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKP 221
N+EV + + + L CE++ W++ E + + Y + +++G++ L
Sbjct: 12471 NIEVSETDTIKLVCEVSKPGAEVIWYKGDEEIIETGRYEI--------LTEGRKRILVIQ 12522
Query: 222 MVGPEDAGSYRCELGS 237
EDAG+Y C L S
Sbjct: 12523 NAHLEDAGNYNCRLPS 12538
Score = 29.3 bits (64), Expect = 5.5
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 214 KEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGEA 272
K ATL P+ +D+G+Y C + S + V P +K+ PS ++ PGE+
Sbjct: 3697 KIATLEIPLAKLKDSGTYVCTASNEAGSSSCSATVTVREPPSFVKKVDPS-YLMLPGES 3754
>gi|157168355 CD22 molecule [Homo sapiens]
Length = 847
Score = 33.5 bits (75), Expect = 0.29
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 202 WGNNTETLVSKGKEATLTKPMVGPEDAGSYRCEL-GSVNSSPATIINFHVTVLPKMIKEE 260
W N L GKE+ L + PEDAGSY C + S+ + + V P+ ++
Sbjct: 543 WEKNGRLL---GKESQLNFDSISPEDAGSYSCWVNNSIGQTASKAWTLEVLYAPRRLRVS 599
Query: 261 KPSPNIVTPGEATT 274
+ V G++ T
Sbjct: 600 MSPGDQVMEGKSAT 613
>gi|139948432 adlican [Homo sapiens]
Length = 2828
Score = 32.3 bits (72), Expect = 0.65
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 200 RVWG--NNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMI 257
RVW + E ++ + TL+ D G Y+C + + + I HV LP +I
Sbjct: 1990 RVWQTVSPVEGRITLHENRTLSIKEASFSDRGVYKCVASNAAGADSLAIRLHVAALPPVI 2049
Query: 258 KEEKPSPNIVTPG 270
+EK + PG
Sbjct: 2050 HQEKLENISLPPG 2062
>gi|50086624 integrator complex subunit 4 [Homo sapiens]
Length = 963
Score = 32.3 bits (72), Expect = 0.65
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 3 PHFTLLCAALAGCLLPAEGCVICDPSVVLALKSLEKDYLPGHLDAKHHKAMMERVENAVK 62
P L+ +A++ ++P E DPS +SLE+ Y HLD + E +E ++
Sbjct: 590 PGRKLVSSAVSPSIIPQE-----DPSQQFLQQSLERVYSLQHLDP---QGAQELLEFTIR 641
Query: 63 DFQELSLNEDAYMGVVD-EATLQKGSWSLLKDLK 95
D Q L + GV D AT + L+K L+
Sbjct: 642 DLQRLGELQSELAGVADFSATYLRCQLLLIKALQ 675
>gi|148596957 myosin binding protein C, cardiac [Homo sapiens]
Length = 1274
Score = 32.0 bits (71), Expect = 0.85
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 32/131 (24%)
Query: 153 KKEVHACRKSYDCGERNVEVPQMEDMILDCE-------LNWHQASEGLTDYSFYRVWGNN 205
KK V A K R+VEV + + E + W + ++ +N
Sbjct: 6 KKPVSAFSKK----PRSVEVAAGSPAVFEAETERAGVKVRWQRGGSDIS--------ASN 53
Query: 206 TETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPN 265
L ++G TLT VGP D GSY GS + + F + K+I+ EK P
Sbjct: 54 KYGLATEGTRHTLTVREVGPADQGSYAVIAGS------SKVKFDL----KVIEAEKAEPM 103
Query: 266 IV---TPGEAT 273
+ P EAT
Sbjct: 104 LAPAPAPAEAT 114
>gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens]
Length = 708
Score = 32.0 bits (71), Expect = 0.85
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 213 GKEATLTKPMVGPEDAGSYRC 233
G ATL P VGPEDAG Y C
Sbjct: 355 GSGATLRLPSVGPEDAGDYVC 375
>gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens]
Length = 583
Score = 32.0 bits (71), Expect = 0.85
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 213 GKEATLTKPMVGPEDAGSYRC 233
G ATL P VGPEDAG Y C
Sbjct: 305 GSGATLRLPSVGPEDAGDYVC 325
>gi|145275170 kin of IRRE-like 2 isoform a [Homo sapiens]
Length = 633
Score = 32.0 bits (71), Expect = 0.85
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 213 GKEATLTKPMVGPEDAGSYRC 233
G ATL P VGPEDAG Y C
Sbjct: 355 GSGATLRLPSVGPEDAGDYVC 375
>gi|153791466 AMIGO protein [Homo sapiens]
Length = 493
Score = 32.0 bits (71), Expect = 0.85
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 147 IWCKNCKKEVHACRKSY-DCGE---RNVEVPQMEDMILDCELNWHQASEGLTDYSFYRVW 202
++C N KK + S+ +CGE R E + +I+ C+ ++ S RV
Sbjct: 251 LYCMNSKKLHNVFNLSFLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVL 310
Query: 203 GNNTETLVSKGKEATLTKPMVGPEDAGSYRC 233
T VS K+ +L V ED G Y C
Sbjct: 311 DEVTNGTVSVSKDGSLLFQQVQVEDGGVYTC 341
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 31.2 bits (69), Expect = 1.4
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Query: 169 NVEVPQMEDMILDCELN-------WHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKP 221
N+EV + + + L CE++ W++ E + + Y + +++G++ L
Sbjct: 6166 NIEVSETDTIKLVCEVSKPGAEVIWYKGDEEIIETGRYEI--------LTEGRKRILVIQ 6217
Query: 222 MVGPEDAGSYRCELGS 237
EDAG+Y C L S
Sbjct: 6218 NAHLEDAGNYNCRLPS 6233
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 31.2 bits (69), Expect = 1.4
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Query: 169 NVEVPQMEDMILDCELN-------WHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKP 221
N+EV + + + L CE++ W++ E + + Y + +++G++ L
Sbjct: 6099 NIEVSETDTIKLVCEVSKPGAEVIWYKGDEEIIETGRYEI--------LTEGRKRILVIQ 6150
Query: 222 MVGPEDAGSYRCELGS 237
EDAG+Y C L S
Sbjct: 6151 NAHLEDAGNYNCRLPS 6166
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 31.2 bits (69), Expect = 1.4
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Query: 169 NVEVPQMEDMILDCELN-------WHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKP 221
N+EV + + + L CE++ W++ E + + Y + +++G++ L
Sbjct: 5974 NIEVSETDTIKLVCEVSKPGAEVIWYKGDEEIIETGRYEI--------LTEGRKRILVIQ 6025
Query: 222 MVGPEDAGSYRCELGS 237
EDAG+Y C L S
Sbjct: 6026 NAHLEDAGNYNCRLPS 6041
>gi|88758596 TEK tyrosine kinase, endothelial precursor [Homo
sapiens]
Length = 1124
Score = 30.8 bits (68), Expect = 1.9
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 216 ATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGEATTE 275
A T + P D+G + C + +V N V VLPK + +PN++ G
Sbjct: 407 AIFTIHRILPPDSGVWVCSVNTVAGMVEKPFNISVKVLPKPLN----APNVIDTGHNFAV 462
Query: 276 SSISLQPLQPEKMLASRLL 294
+IS +P + + S+ L
Sbjct: 463 INISSEPYFGDGPIKSKKL 481
>gi|9507203 triggering receptor expressed on myeloid cells 2
precursor [Homo sapiens]
Length = 230
Score = 30.8 bits (68), Expect = 1.9
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 197 SFYRVWGNNTE-TLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPA-TIINFHVTVLP 254
SF R W +T T + G T+T + P DAG Y+C+ S++ S A T+ V VL
Sbjct: 73 SFLRRWNGSTAITDDTLGGTLTITLRNLQPHDAGLYQCQ--SLHGSEADTLRKVLVEVLA 130
Query: 255 KMIKEEKPSPNIVTPGE------ATTESSISLQPLQPE-KMLASRLLGLLIC 299
+ + + + ++ PGE A E SIS L+ E + +L LL C
Sbjct: 131 DPL-DHRDAGDLWFPGESESFEDAHVEHSISRSLLEGEIPFPPTSILLLLAC 181
>gi|89903023 hypothetical protein LOC113177 isoform 3 [Homo sapiens]
Length = 232
Score = 30.8 bits (68), Expect = 1.9
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 135 CPNKCGVMLQTLIWCKNCKKEVHACRKSYDCGERNVEVPQMEDMILDCELNWHQASEGLT 194
C ++CG+ I C NC AC Y+C E + + +L+ NWH+ +
Sbjct: 128 CQHRCGIFQYETISCNNCTDSHVAC-FGYNC-ESSAQWKSAVQGLLNYINNWHKQDTSMR 185
Query: 195 DYSFYRVW 202
S W
Sbjct: 186 PRSSAFSW 193
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 30.4 bits (67), Expect = 2.5
Identities = 34/126 (26%), Positives = 45/126 (35%), Gaps = 24/126 (19%)
Query: 132 EAYCPNK-----CGVMLQTLIWCKNCKKEVHACRKSYDCGERNVEVPQMEDMILDCELNW 186
EA CP K CG + C C + DC +R+ E M ++
Sbjct: 356 EANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRES 415
Query: 187 HQASEGLTDYSFYRV--------------WGNNTE----TLVSKGKEATLTKPMVGPEDA 228
QAS G T +F V WG+ T+ S+G TL V D
Sbjct: 416 IQASRGQT-VTFTCVAIGVPTPIINWRLNWGHIPSHPRVTVTSEGGRGTLIIRDVKESDQ 474
Query: 229 GSYRCE 234
G+Y CE
Sbjct: 475 GAYTCE 480
>gi|24111244 MAM domain containing glycosylphosphatidylinositol
anchor 1 [Homo sapiens]
Length = 955
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 207 ETLVSKGKEATLTKPMVGPEDAGSYRCELG--SVNSSPATIINFHV--TVLPKMIKEEKP 262
E L ++G+ L + P+D SY C++ +V P I F + T P +K
Sbjct: 188 EPLYTQGETKVLKLKNLRPQDYASYTCQVSVRNVCGIPDKAITFRLTNTTAPPALKLSVN 247
Query: 263 SPNIVTPGEATT 274
+V PGE T
Sbjct: 248 ETLVVNPGENVT 259
>gi|89903025 hypothetical protein LOC113177 isoform 1 [Homo sapiens]
Length = 214
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 135 CPNKCGVMLQTLIWCKNCKKEVHACRKSYDCGERNVEVPQMEDMILDCELNWHQASEGLT 194
C ++CG+ I C NC AC Y+C E + + +L+ NWH+ ++
Sbjct: 128 CQHRCGIFQYETISCNNCTDSHVAC-FGYNC-ESSAQWKSAVQGLLNYINNWHKQDTSMS 185
>gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo
sapiens]
Length = 1248
Score = 29.6 bits (65), Expect = 4.2
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 217 TLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGE-ATTE 275
TL VG ED G YRC + NS + ++VTV KP ++ PGE A +
Sbjct: 291 TLQLLKVGEEDDGEYRCL--AENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPGETARLD 348
Query: 276 SSISLQPLQPE 286
+ +P QPE
Sbjct: 349 CQVQGRP-QPE 358
>gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo
sapiens]
Length = 1253
Score = 29.6 bits (65), Expect = 4.2
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 217 TLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGE-ATTE 275
TL VG ED G YRC + NS + ++VTV KP ++ PGE A +
Sbjct: 296 TLQLLKVGEEDDGEYRCL--AENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPGETARLD 353
Query: 276 SSISLQPLQPE 286
+ +P QPE
Sbjct: 354 CQVQGRP-QPE 363
>gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo
sapiens]
Length = 1257
Score = 29.6 bits (65), Expect = 4.2
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 217 TLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGE-ATTE 275
TL VG ED G YRC + NS + ++VTV KP ++ PGE A +
Sbjct: 296 TLQLLKVGEEDDGEYRCL--AENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPGETARLD 353
Query: 276 SSISLQPLQPE 286
+ +P QPE
Sbjct: 354 CQVQGRP-QPE 363
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 29.6 bits (65), Expect = 4.2
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Query: 202 WGNNTETLVSKGK------EATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPK 255
W T++ G+ + TL+ P DAG Y C ++ + T I HV P
Sbjct: 1204 WSKGGSTMLVDGEHHVSNPDGTLSIDQATPSDAGIYTCVATNIAGTDETEITLHVQEPPT 1263
Query: 256 MIKEEKP 262
+ E P
Sbjct: 1264 VEDLEPP 1270
Score = 28.5 bits (62), Expect = 9.4
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 200 RVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKE 259
+V ++T V+ GK L + PEDAG Y C+ ++ + N V V P +I
Sbjct: 1400 QVTESSTIQTVNNGKILKLFRAT--PEDAGRYSCKAINIAGTSQKYFNIDVLVPPTIIGT 1457
Query: 260 EKPS 263
P+
Sbjct: 1458 NFPN 1461
>gi|11225258 myelin associated glycoprotein isoform a precursor
[Homo sapiens]
Length = 626
Score = 29.6 bits (65), Expect = 4.2
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 215 EATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKE 259
E L P V PED G Y C + AT N V P ++ E
Sbjct: 374 ELQLELPAVSPEDDGEYWCVAENQYGQRATAFNLSVEFAPVLLLE 418
>gi|18104957 myelin associated glycoprotein isoform b precursor
[Homo sapiens]
Length = 582
Score = 29.6 bits (65), Expect = 4.2
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 215 EATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKE 259
E L P V PED G Y C + AT N V P ++ E
Sbjct: 374 ELQLELPAVSPEDDGEYWCVAENQYGQRATAFNLSVEFAPVLLLE 418
>gi|169214831 PREDICTED: zinc finger protein 840 [Homo sapiens]
Length = 980
Score = 29.3 bits (64), Expect = 5.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 137 NKCGVMLQTLIWCKNCKKEVHACRKSYDCGE 167
N+CG + L W N K++H K Y+CGE
Sbjct: 900 NECGKTFR-LNWKLNQHKKIHTGEKPYECGE 929
Score = 28.5 bits (62), Expect = 9.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 137 NKCGVMLQTLIWCKNCKKEVHACRKSYDCGE 167
N+CG + L W N K++H K Y+CGE
Sbjct: 712 NECGKTYR-LNWELNQHKKIHTGEKPYECGE 741
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,610,532
Number of Sequences: 37866
Number of extensions: 611102
Number of successful extensions: 2279
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2111
Number of HSP's gapped (non-prelim): 200
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.