Guide to the Human Genome
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Name: C19orf36 Sequence: fasta or formatted (232aa) NCBI GI: 89903023
Description:

hypothetical protein LOC113177 isoform 3

Not currently referenced in the text

Other entries for this name:
alt prot {214aa} hypothetical protein LOC113177 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         20           2
 C cysteine            5.2         12           1
 D aspartate           4.3         10           2
 E glutamate           4.3         10           1
 F phenylalanine       4.7         11           1
 G glycine             3.9          9           1
 H histidine           5.6         13           2
 I isoleucine          4.7         11           2
 K lysine              4.3         10           2
 L leucine            10.3         24           3
 M methionine          2.6          6           2
 N asparagine          5.2         12           2
 P proline             4.3         10           2
 Q glutamine           5.2         12           1
 R arginine            4.3         10           1
 S serine              7.3         17           2
 T threonine           4.7         11           1
 V valine              4.3         10           1
 W tryptophan          2.6          6           2
 Y tyrosine            3.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC113177 isoform 3 
C19orf36              0.888   hypothetical protein LOC113177 isoform 1 
IZUMO1                0.013   izumo sperm-egg fusion 1 
SELP                  0.008   selectin P precursor 
PHLDA2                0.008   pleckstrin homology-like domain family A member 2 [Ho...
SLC39A10              0.008   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.008   solute carrier family 39 (zinc transporter), member ...
FSD1                  0.006   fibronectin type III and SPRY domain containing 1 [H...
ZNF684                0.006   zinc finger protein 684 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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