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Search of human proteins with 194097323
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194097323 mitochondrial short-chain enoyl-coenzyme A
hydratase 1 precursor [Homo sapiens]
(290 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 575 e-164
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 139 4e-33
gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo... 127 1e-29
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 115 4e-26
gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Hom... 100 1e-21
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 100 1e-21
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 97 2e-20
gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... 96 4e-20
gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [... 96 4e-20
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 89 3e-18
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 89 3e-18
gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 87 1e-17
gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 87 1e-17
gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 87 1e-17
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 87 1e-17
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 87 1e-17
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 84 1e-16
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 84 1e-16
gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 84 1e-16
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof... 75 5e-14
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof... 75 5e-14
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 70 2e-12
gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isof... 62 6e-10
gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom... 59 7e-09
gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Hom... 55 6e-08
gi|50593027 enoyl Coenzyme A hydratase domain containing 1 isofo... 34 0.17
gi|11863154 archain isoform 1 [Homo sapiens] 32 0.65
gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens] 30 2.5
gi|207452735 epiplakin 1 [Homo sapiens] 30 3.2
gi|13775238 plasmalemma vesicle associated protein [Homo sapiens] 30 3.2
>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
precursor [Homo sapiens]
Length = 290
Score = 575 bits (1481), Expect = e-164
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MAALRVLLSCVRGPLRPPVRCPAWRPFASGANFEYIIAEKRGKNNTVGLIQLNRPKALNA 60
MAALRVLLSCVRGPLRPPVRCPAWRPFASGANFEYIIAEKRGKNNTVGLIQLNRPKALNA
Sbjct: 1 MAALRVLLSCVRGPLRPPVRCPAWRPFASGANFEYIIAEKRGKNNTVGLIQLNRPKALNA 60
Query: 61 LCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHW 120
LCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHW
Sbjct: 61 LCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHW 120
Query: 121 DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLT 180
DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLT
Sbjct: 121 DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLT 180
Query: 181 RAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMA 240
RAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMA
Sbjct: 181 RAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMA 240
Query: 241 KESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANFKDQ 290
KESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANFKDQ
Sbjct: 241 KESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANFKDQ 290
>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
precursor [Homo sapiens]
Length = 339
Score = 139 bits (349), Expect = 4e-33
Identities = 88/293 (30%), Positives = 139/293 (47%), Gaps = 19/293 (6%)
Query: 17 PPVRCPAWRPFASG------------ANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDG 64
P + W P A G E + +N + ++ +NR N+L
Sbjct: 47 PAIWAQGWVPAAGGPAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKN 106
Query: 65 LIDELNQALKTFEEDPAVGAIVLTGGDKA-FAAGADIKEMQNLSFQDC--YSSKFLKHWD 121
LI L++A+ + D V I++ F AGAD+KE +S + + SK +
Sbjct: 107 LIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVIN 166
Query: 122 HLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTR 181
+ + P IAA++G A GGG ELA+ CDI A A+ E + IPG GGTQRL R
Sbjct: 167 DIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPR 226
Query: 182 AVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPV----ETLVEEAIQCAEKIASNSKIVV 237
A+G SLA E++ + + ++AK GL+S + + +A+ A + + +
Sbjct: 227 AIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAM 286
Query: 238 AMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANFKDQ 290
+AK ++N E+ L G +E+ + T T DR EG+ AF EKR +K +
Sbjct: 287 RVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
>gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo
sapiens]
Length = 303
Score = 127 bits (319), Expect = 1e-29
Identities = 81/238 (34%), Positives = 122/238 (51%), Gaps = 4/238 (1%)
Query: 50 IQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQ 109
I L+ PK N L ++ L + + + I+++ F++G D+KE+ +
Sbjct: 59 IVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGR 118
Query: 110 DCYSSKFL---KHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEIL 166
D ++ F K H+ PVIA VNG A GC+L CDI A +K+ FA P +
Sbjct: 119 DYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVN 178
Query: 167 IGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCA 226
+G G L RAV + +A+EM+ TG+ ISAQ+A GL+SK+ P L EE ++ A
Sbjct: 179 VGLFCSTPGVA-LARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIA 237
Query: 227 EKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRK 284
KIAS S+ VV++ K + L L + A D +EG+TAF++KRK
Sbjct: 238 RKIASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRK 295
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 115 bits (288), Expect = 4e-26
Identities = 84/284 (29%), Positives = 139/284 (48%), Gaps = 39/284 (13%)
Query: 37 IAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAA 96
+AE +N + LI+L P +NA+ L+ ++ + L+ D + AIV+ G + F+A
Sbjct: 1 MAEYTRLHNALALIRLRNPP-VNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSA 59
Query: 97 GADIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGE 156
GADI+ S + D + + +KPV+AA+ G AFGGG ELA+ C A
Sbjct: 60 GADIR---GFSAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHA 116
Query: 157 KAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVE 216
+AQ PE+ +G +PGA GTQ L R G A++++ +G RI A +A + G++ K+ +
Sbjct: 117 EAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 176
Query: 217 TLVEEAIQCAEKIASN----------------------SKIVVAMAKE------------ 242
VEEAI+ A++++ S+ ++ M ++
Sbjct: 177 P-VEEAIRFAQRVSDQPLESRRLCNKPIQSLPNMDSIFSEALLKMRRQHPGCLAQEACVR 235
Query: 243 SVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKAN 286
+V AA + G K E++LF + + AF +RKAN
Sbjct: 236 AVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKAN 279
>gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Homo
sapiens]
Length = 261
Score = 100 bits (249), Expect = 1e-21
Identities = 85/289 (29%), Positives = 125/289 (43%), Gaps = 37/289 (12%)
Query: 4 LRVLLSCVRGPLRPPVRCPAWRPFASGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCD 63
LRVL C+ P RP +R + E + G + + I +NRP A NAL +
Sbjct: 2 LRVL--CLLRPWRP-LRARGCASDGAAGGSEIQVRALAGPDQGITEILMNRPSARNALGN 58
Query: 64 GLIDELNQALKTFEEDPAVGAIVLTGGDKA-FAAGADIKEMQNLSFQDCYSSKFLKHWDH 122
+ EL + L ED V ++ G K F AGAD+KE + +S +
Sbjct: 59 VFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEV----------- 107
Query: 123 LTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRA 182
+ + G +M DI A E G +PGAGGTQRL R
Sbjct: 108 -----GVFVQRLRG----------LMNDI---ASSAVMGLIETTRGLLPGAGGTQRLPRC 149
Query: 183 VGKSLAMEMVLTGDRISAQDAKQAGLVSKICPV----ETLVEEAIQCAEKIASNSKIVVA 238
+G +LA E++ TG R+S +A GLV+ + + A A++I + I V
Sbjct: 150 LGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQEILPQAPIAVR 209
Query: 239 MAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANF 287
+ K +++ E+ + G +E + T DR EGM AF EKR F
Sbjct: 210 LGKVAIDRGTEVDIASGMAIEGMCYAQNIPTRDRLEGMAAFREKRTPKF 258
>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
[Homo sapiens]
Length = 328
Score = 100 bits (249), Expect = 1e-21
Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 15/250 (6%)
Query: 50 IQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQ 109
+QLNRP NA+ E+ + D A+V++G K F AG D+ +M + Q
Sbjct: 70 VQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQ 129
Query: 110 DCYS-------------SKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGE 156
+++ + ++ + + KPVIAAV+G GGG +L CDI Y +
Sbjct: 130 PKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQ 189
Query: 157 KAQFAQPEILIGTIPGAGGTQRLTRAVG-KSLAMEMVLTGDRISAQDAKQAGLVSKICP- 214
A F E+ +G G QRL + +G +SL E+ T ++ A +A +GLVS++ P
Sbjct: 190 DAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPD 249
Query: 215 VETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKE 274
E +++ A+ A +I+S S + V K ++ + + ++ E S T D +
Sbjct: 250 KEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDLVK 309
Query: 275 GMTAFVEKRK 284
+ A E ++
Sbjct: 310 SVQATTENKE 319
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 97.1 bits (240), Expect = 2e-20
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
Query: 42 GKNNTVGLIQLNRPKA-LNALCDGLIDELNQAL-KTFEEDPAVGAIVLTGGDKAFAAGAD 99
G V ++++N P + +N L L E ++ + + + D A++++ F AGAD
Sbjct: 44 GVKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGAD 103
Query: 100 IKEM---QNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCD--IIYA 154
I + + L S + + + L + KP++AA+NG GGG E+A+ C I
Sbjct: 104 INMLAACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATK 163
Query: 155 GEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKI 212
K PE+L+G +PGAGGTQRL + VG A++M+LTG I A AK+ GLV ++
Sbjct: 164 DRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQL 221
>gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
[Homo sapiens]
Length = 338
Score = 95.9 bits (237), Expect = 4e-20
Identities = 76/236 (32%), Positives = 117/236 (49%), Gaps = 25/236 (10%)
Query: 34 EYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTG-GDK 92
E ++ EK+G G+I LNRPK LNAL +I ++ LK +E+DP I++ G G K
Sbjct: 36 EEVLLEKKG---CTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGK 92
Query: 93 AFAAGADIKEMQNLS-FQDCYSSKFLKHWDHLTQV----KKPVIAAVNGYAFGGGCELAM 147
AF AG DI+ + + + F + L +KP +A ++G GGG L++
Sbjct: 93 AFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSV 152
Query: 148 MCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAG 207
A EK FA PE IG P GG L R GK L + LTG R+ +D +AG
Sbjct: 153 HGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-LGYFLALTGFRLKGRDVYRAG 211
Query: 208 LVSKICPVETLVEEAIQCAEKIASNSKIVVAM---AKESVNAAFEMTLTEGSKLEK 260
+ + +EK+A + ++A+ +KE++ + E TE SK+++
Sbjct: 212 IATHFVD-----------SEKLAMLEEDLLALKSPSKENIASVLENYHTE-SKIDR 255
>gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1
[Homo sapiens]
Length = 386
Score = 95.9 bits (237), Expect = 4e-20
Identities = 76/236 (32%), Positives = 117/236 (49%), Gaps = 25/236 (10%)
Query: 34 EYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTG-GDK 92
E ++ EK+G G+I LNRPK LNAL +I ++ LK +E+DP I++ G G K
Sbjct: 36 EEVLLEKKG---CTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGK 92
Query: 93 AFAAGADIKEMQNLS-FQDCYSSKFLKHWDHLTQV----KKPVIAAVNGYAFGGGCELAM 147
AF AG DI+ + + + F + L +KP +A ++G GGG L++
Sbjct: 93 AFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSV 152
Query: 148 MCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAG 207
A EK FA PE IG P GG L R GK L + LTG R+ +D +AG
Sbjct: 153 HGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-LGYFLALTGFRLKGRDVYRAG 211
Query: 208 LVSKICPVETLVEEAIQCAEKIASNSKIVVAM---AKESVNAAFEMTLTEGSKLEK 260
+ + +EK+A + ++A+ +KE++ + E TE SK+++
Sbjct: 212 IATHFVD-----------SEKLAMLEEDLLALKSPSKENIASVLENYHTE-SKIDR 255
>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
a [Homo sapiens]
Length = 540
Score = 89.4 bits (220), Expect = 3e-18
Identities = 65/265 (24%), Positives = 128/265 (48%), Gaps = 9/265 (3%)
Query: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLT 88
S + + I+ +K ++ ++ R NAL +I E+ AL + D + ++ +
Sbjct: 279 SASTYRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSK-LVLFS 335
Query: 89 GGDKAFAAGAD----IKEMQN-LSFQDCYSSKFLKHW-DHLTQVKKPVIAAVNGYAFGGG 142
F G D +K ++N + +K++ + Q KKP++ +VNG A G G
Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395
Query: 143 CELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD 202
+ +CD+++A EKA F P G P + + +GK+ A EM++ G +++A++
Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455
Query: 203 AKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKL 262
A GLVS++ T +E + +++AS + IV+ K V ++ L + ++ E ++
Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515
Query: 263 FYSTFATDDRKEGMTAFVEKRKANF 287
+++ E M +VE + F
Sbjct: 516 LRKIWSSAQGIESMLKYVENKIDEF 540
>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
sapiens]
Length = 540
Score = 89.4 bits (220), Expect = 3e-18
Identities = 65/265 (24%), Positives = 128/265 (48%), Gaps = 9/265 (3%)
Query: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLT 88
S + + I+ +K ++ ++ R NAL +I E+ AL + D + ++ +
Sbjct: 279 SASTYRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSK-LVLFS 335
Query: 89 GGDKAFAAGAD----IKEMQN-LSFQDCYSSKFLKHW-DHLTQVKKPVIAAVNGYAFGGG 142
F G D +K ++N + +K++ + Q KKP++ +VNG A G G
Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395
Query: 143 CELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD 202
+ +CD+++A EKA F P G P + + +GK+ A EM++ G +++A++
Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455
Query: 203 AKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKL 262
A GLVS++ T +E + +++AS + IV+ K V ++ L + ++ E ++
Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515
Query: 263 FYSTFATDDRKEGMTAFVEKRKANF 287
+++ E M +VE + F
Sbjct: 516 LRKIWSSAQGIESMLKYVENKIDEF 540
>gi|221307494 chromodomain protein, Y chromosome-like isoform a
[Homo sapiens]
Length = 544
Score = 87.4 bits (215), Expect = 1e-17
Identities = 59/235 (25%), Positives = 117/235 (49%), Gaps = 7/235 (2%)
Query: 59 NALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADI-----KEMQNLSFQDCYS 113
N+L ++ E+ AL T D + ++L+ F G D + + +
Sbjct: 311 NSLNPEVMREVQSALSTAAADDSK-LVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKM 369
Query: 114 SKFLKHW-DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPG 172
++ ++++ + Q KKP+I AVNG A G G + +CD+++A EKA F P G P
Sbjct: 370 AEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPD 429
Query: 173 AGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASN 232
T + +G + A EM+L+G +++AQ+A GLVS++ T +E + +++AS
Sbjct: 430 GCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASC 489
Query: 233 SKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANF 287
+ +V+ +K V +M L + ++ E ++ + + + M +++++ F
Sbjct: 490 NPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 544
>gi|221136756 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 87.4 bits (215), Expect = 1e-17
Identities = 59/235 (25%), Positives = 117/235 (49%), Gaps = 7/235 (2%)
Query: 59 NALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADI-----KEMQNLSFQDCYS 113
N+L ++ E+ AL T D + ++L+ F G D + + +
Sbjct: 179 NSLNPEVMREVQSALSTAAADDSK-LVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKM 237
Query: 114 SKFLKHW-DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPG 172
++ ++++ + Q KKP+I AVNG A G G + +CD+++A EKA F P G P
Sbjct: 238 AEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPD 297
Query: 173 AGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASN 232
T + +G + A EM+L+G +++AQ+A GLVS++ T +E + +++AS
Sbjct: 298 GCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASC 357
Query: 233 SKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANF 287
+ +V+ +K V +M L + ++ E ++ + + + M +++++ F
Sbjct: 358 NPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
>gi|221136753 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 87.4 bits (215), Expect = 1e-17
Identities = 59/235 (25%), Positives = 117/235 (49%), Gaps = 7/235 (2%)
Query: 59 NALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADI-----KEMQNLSFQDCYS 113
N+L ++ E+ AL T D + ++L+ F G D + + +
Sbjct: 179 NSLNPEVMREVQSALSTAAADDSK-LVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKM 237
Query: 114 SKFLKHW-DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPG 172
++ ++++ + Q KKP+I AVNG A G G + +CD+++A EKA F P G P
Sbjct: 238 AEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPD 297
Query: 173 AGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASN 232
T + +G + A EM+L+G +++AQ+A GLVS++ T +E + +++AS
Sbjct: 298 GCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASC 357
Query: 233 SKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANF 287
+ +V+ +K V +M L + ++ E ++ + + + M +++++ F
Sbjct: 358 NPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
Length = 541
Score = 87.4 bits (215), Expect = 1e-17
Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 13/267 (4%)
Query: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLT 88
S + I+ +K ++ ++ R NAL +I E+ AL + D + ++ +
Sbjct: 280 SAITYRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSK-LVLFS 336
Query: 89 GGDKAFAAGAD-------IKEMQNLSFQDCYSSKFLKHW-DHLTQVKKPVIAAVNGYAFG 140
F G D ++ +N + + + +K++ + Q KKP++ +VNG A G
Sbjct: 337 AAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDT--IKNFVNTFIQFKKPIVVSVNGPAIG 394
Query: 141 GGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISA 200
G + +CD+++A EKA F P G P + + +GK+ A EM++ G +++A
Sbjct: 395 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTA 454
Query: 201 QDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEK 260
++A GLVS++ T +E + +++AS + IV+ K V ++ L + ++ E
Sbjct: 455 REACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANEREC 514
Query: 261 KLFYSTFATDDRKEGMTAFVEKRKANF 287
++ +++ E M +VE + F
Sbjct: 515 EVLRKIWSSAQGIESMLKYVENKIDEF 541
>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
Length = 541
Score = 87.4 bits (215), Expect = 1e-17
Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 13/267 (4%)
Query: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLT 88
S + I+ +K ++ ++ R NAL +I E+ AL + D + ++ +
Sbjct: 280 SAITYRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSK-LVLFS 336
Query: 89 GGDKAFAAGAD-------IKEMQNLSFQDCYSSKFLKHW-DHLTQVKKPVIAAVNGYAFG 140
F G D ++ +N + + + +K++ + Q KKP++ +VNG A G
Sbjct: 337 AAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDT--IKNFVNTFIQFKKPIVVSVNGPAIG 394
Query: 141 GGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISA 200
G + +CD+++A EKA F P G P + + +GK+ A EM++ G +++A
Sbjct: 395 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTA 454
Query: 201 QDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEK 260
++A GLVS++ T +E + +++AS + IV+ K V ++ L + ++ E
Sbjct: 455 REACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANEREC 514
Query: 261 KLFYSTFATDDRKEGMTAFVEKRKANF 287
++ +++ E M +VE + F
Sbjct: 515 EVLRKIWSSAQGIESMLKYVENKIDEF 541
>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
[Homo sapiens]
Length = 554
Score = 84.3 bits (207), Expect = 1e-16
Identities = 62/254 (24%), Positives = 123/254 (48%), Gaps = 9/254 (3%)
Query: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLT 88
S + + I+ +K ++ ++ R NAL +I E+ AL + D + ++ +
Sbjct: 279 SASTYRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSK-LVLFS 335
Query: 89 GGDKAFAAGAD----IKEMQN-LSFQDCYSSKFLKHW-DHLTQVKKPVIAAVNGYAFGGG 142
F G D +K ++N + +K++ + Q KKP++ +VNG A G G
Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395
Query: 143 CELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD 202
+ +CD+++A EKA F P G P + + +GK+ A EM++ G +++A++
Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455
Query: 203 AKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKL 262
A GLVS++ T +E + +++AS + IV+ K V ++ L + ++ E ++
Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515
Query: 263 FYSTFATDDRKEGM 276
+++ E M
Sbjct: 516 LRKIWSSAQGIESM 529
>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
sapiens]
Length = 554
Score = 84.3 bits (207), Expect = 1e-16
Identities = 62/254 (24%), Positives = 123/254 (48%), Gaps = 9/254 (3%)
Query: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLT 88
S + + I+ +K ++ ++ R NAL +I E+ AL + D + ++ +
Sbjct: 279 SASTYRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSK-LVLFS 335
Query: 89 GGDKAFAAGAD----IKEMQN-LSFQDCYSSKFLKHW-DHLTQVKKPVIAAVNGYAFGGG 142
F G D +K ++N + +K++ + Q KKP++ +VNG A G G
Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395
Query: 143 CELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD 202
+ +CD+++A EKA F P G P + + +GK+ A EM++ G +++A++
Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455
Query: 203 AKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKL 262
A GLVS++ T +E + +++AS + IV+ K V ++ L + ++ E ++
Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515
Query: 263 FYSTFATDDRKEGM 276
+++ E M
Sbjct: 516 LRKIWSSAQGIESM 529
>gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]
Length = 506
Score = 84.3 bits (207), Expect = 1e-16
Identities = 60/233 (25%), Positives = 118/233 (50%), Gaps = 11/233 (4%)
Query: 59 NALCDGLIDELNQALKTFEEDP-------AVGAIVLTGGDKAFAAGADIKEMQNLSFQDC 111
NAL ++ E+ +AL D AVG++ +G D ++ G + + S +
Sbjct: 273 NALTPEIMKEVRRALCNAATDDSKLLLLSAVGSVFCSGLDYSYLIGRLSSDRRKESTRIA 332
Query: 112 YSSK-FLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTI 170
+ + F+K + Q KKP++ A+NG A G G + +CDI++A EKA F P I
Sbjct: 333 EAIRDFVKAF---IQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLT 389
Query: 171 PGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIA 230
P + + +G +LA EM+ G +++AQ+A GLVS++ T +E + +++A
Sbjct: 390 PAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMA 449
Query: 231 SNSKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKR 283
S S +V+ +K V + + L + ++ E + +++ + + ++++ +
Sbjct: 450 SCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSKGLDSLFSYLQDK 502
>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
1 [Homo sapiens]
Length = 301
Score = 75.5 bits (184), Expect = 5e-14
Identities = 56/228 (24%), Positives = 113/228 (49%), Gaps = 10/228 (4%)
Query: 43 KNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKE 102
++N +G++ LN P +NA ++ +L + + E +++ G F++G+D+
Sbjct: 54 EDNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNA 113
Query: 103 MQNLSFQDCYSSKFLKHWDHLTQ-VKKPVI--AAVNGYAFGGGCELAMMCD--IIYAGEK 157
+++L + + + + LT+ ++ P+I A V G+A GGG E CD ++ K
Sbjct: 114 VKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESK 173
Query: 158 AQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVE- 216
+F E +G IP GGT RL +G A++++ ++ +++A G+V ++
Sbjct: 174 IRFVHKE--MGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSD 231
Query: 217 --TLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKL 262
+EEA + ++ V+ K+SV + E+ L E + E+ L
Sbjct: 232 ETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEALQNERDL 279
>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
5 [Homo sapiens]
Length = 307
Score = 75.5 bits (184), Expect = 5e-14
Identities = 56/228 (24%), Positives = 113/228 (49%), Gaps = 10/228 (4%)
Query: 43 KNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKE 102
++N +G++ LN P +NA ++ +L + + E +++ G F++G+D+
Sbjct: 60 EDNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNA 119
Query: 103 MQNLSFQDCYSSKFLKHWDHLTQ-VKKPVI--AAVNGYAFGGGCELAMMCD--IIYAGEK 157
+++L + + + + LT+ ++ P+I A V G+A GGG E CD ++ K
Sbjct: 120 VKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESK 179
Query: 158 AQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVE- 216
+F E +G IP GGT RL +G A++++ ++ +++A G+V ++
Sbjct: 180 IRFVHKE--MGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSD 237
Query: 217 --TLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKL 262
+EEA + ++ V+ K+SV + E+ L E + E+ L
Sbjct: 238 ETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEALQNERDL 285
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 70.1 bits (170), Expect = 2e-12
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 7/240 (2%)
Query: 50 IQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNL--- 106
I NRPK NA+ + E+ +ALK +D ++ VLTG +++G D+ ++
Sbjct: 123 IMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPG 181
Query: 107 --SFQDCYSSKFLKHW-DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQP 163
+ ++ L+ + KP+IA VNG A G L + D +YA ++A F P
Sbjct: 182 GVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTP 241
Query: 164 EILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAI 223
+G P + + + + A EM++ G +++A +A GLV+++ P T +E
Sbjct: 242 FSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVW 301
Query: 224 QCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKR 283
+ A + ++KE + L + E + + +D+ + F+ ++
Sbjct: 302 TRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 361
>gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isoform
3 [Homo sapiens]
Length = 226
Score = 62.0 bits (149), Expect = 6e-10
Identities = 47/186 (25%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 85 IVLTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQ-VKKPVI--AAVNGYAFGG 141
+++ G F++G+D+ +++L + + + + LT+ ++ P+I A V G+A GG
Sbjct: 21 LIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGG 80
Query: 142 GCELAMMCD--IIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRIS 199
G E CD ++ K +F E+ G IP GGT RL +G A++++ ++
Sbjct: 81 GAEFTTACDFRLMTPESKIRFVHKEM--GIIPSWGGTTRLVEIIGSRQALKVLSGALKLD 138
Query: 200 AQDAKQAGLVSKICPVE---TLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGS 256
+++A G+V ++ +EEA + ++ V+ K+SV + E+ L E
Sbjct: 139 SKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEAL 198
Query: 257 KLEKKL 262
+ E+ L
Sbjct: 199 QNERDL 204
>gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Homo
sapiens]
Length = 227
Score = 58.5 bits (140), Expect = 7e-09
Identities = 49/222 (22%), Positives = 99/222 (44%), Gaps = 7/222 (3%)
Query: 68 ELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNL-----SFQDCYSSKFLKHW-D 121
E+ +ALK +D ++ VLTG +++G D+ ++ + ++ L+ +
Sbjct: 4 EIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVG 62
Query: 122 HLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTR 181
KP+IA VNG A G L + D +YA ++A F P +G P + +
Sbjct: 63 CFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPK 122
Query: 182 AVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAK 241
+ + A EM++ G +++A +A GLV+++ P T +E + A + ++K
Sbjct: 123 IMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISK 182
Query: 242 ESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKR 283
E + L + E + + +D+ + F+ ++
Sbjct: 183 EVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224
>gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Homo
sapiens]
Length = 302
Score = 55.5 bits (132), Expect = 6e-08
Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 47 VGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKA-FAAGADIKEM-- 103
V +++ P +N+L + EL +L+ E D + ++LT F+AG D+ EM
Sbjct: 57 VAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCG 115
Query: 104 QNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQF--A 161
++ + Y + W L Q +++A+NG GGC +A+ CD + ++
Sbjct: 116 RSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIG 175
Query: 162 QPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEE 221
E +G I L +G A + G +A Q G+V ++ P E +
Sbjct: 176 LNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEEQVQST 235
Query: 222 AIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVE 281
A+ + + + K + A L + + F S + D ++ + ++E
Sbjct: 236 ALSAIAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLE 295
Query: 282 KRK 284
+ K
Sbjct: 296 RLK 298
>gi|50593027 enoyl Coenzyme A hydratase domain containing 1 isoform
2 [Homo sapiens]
Length = 145
Score = 33.9 bits (76), Expect = 0.17
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 43 KNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKE 102
++N +G++ LN P +NA ++ +L + + E +++ G F++G+D+
Sbjct: 54 EDNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNA 113
Query: 103 MQNL-----SFQDC 111
+++L SF C
Sbjct: 114 VKSLGTPETSFNKC 127
>gi|11863154 archain isoform 1 [Homo sapiens]
Length = 511
Score = 32.0 bits (71), Expect = 0.65
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 185 KSLAMEMVLTGDRISAQDAKQAGLVSKICP--VETLVEEAIQ--CAEKIASNSKIVVAMA 240
+ L M ++ T + +D + L S++ P L E I C + I + +IV
Sbjct: 62 EKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGY 121
Query: 241 KESVNAAFEMTLTEGSKLEKKLFYSTFATDDRK 273
+E+VN A T TE E+K+F + T +R+
Sbjct: 122 RENVNLAQIRTFTEMDSHEEKVFRAVRETQERE 154
>gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 492
Score = 30.0 bits (66), Expect = 2.5
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 129 PVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLA 188
P++AA GG A A E + A PE L+G I G G GK+L
Sbjct: 380 PLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKG---------GKTLV 430
Query: 189 MEMVLTGDRI 198
LTG RI
Sbjct: 431 EYQELTGARI 440
>gi|207452735 epiplakin 1 [Homo sapiens]
Length = 5090
Score = 29.6 bits (65), Expect = 3.2
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 133 AVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMV 192
AV +G GC ++ +G KA AQ + G +P G QRL A S +
Sbjct: 1237 AVKACLWGTGCVAGVLLQP--SGAKASIAQA-VRDGLLPTGLG-QRLLEAQVASGFLVDP 1292
Query: 193 LTGDRISAQDAKQAGLVSK 211
L R+S +DA + GLV +
Sbjct: 1293 LNNQRLSVEDAVKVGLVGR 1311
>gi|13775238 plasmalemma vesicle associated protein [Homo sapiens]
Length = 442
Score = 29.6 bits (65), Expect = 3.2
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 56 KALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQDCYSSK 115
K +N CD L+ LNQ +KT E + A + T ++ + E Q +C ++
Sbjct: 148 KDMNKSCDALLFMLNQKVKTLEVEIAKEKTICTKDKESVLLNKRVAEEQ---LVECVKTR 204
Query: 116 FLKH 119
L+H
Sbjct: 205 ELQH 208
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,039,005
Number of Sequences: 37866
Number of extensions: 396184
Number of successful extensions: 899
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 843
Number of HSP's gapped (non-prelim): 47
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.