Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CYP2C18 Sequence: fasta or formatted (431aa) NCBI GI: 193083148
Description:

cytochrome P450 family 2 subfamily C polypeptide 18 isoform 2

Referenced in:

Cytochrome P450 Enzymes

Other entries for this name:
alt prot [490aa] cytochrome P450 family 2 subfamily C polypeptide 18 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         17           1
 C cysteine            3.0         13           1
 D aspartate           4.9         21           1
 E glutamate           6.0         26           2
 F phenylalanine       6.5         28           1
 G glycine             6.3         27           1
 H histidine           2.1          9           1
 I isoleucine          5.8         25           2
 K lysine              6.0         26           2
 L leucine            11.1         48           5
 M methionine          3.0         13           1
 N asparagine          4.6         20           1
 P proline             6.3         27           2
 Q glutamine           3.0         13           2
 R arginine            5.3         23           2
 S serine              6.3         27           2
 T threonine           5.8         25           2
 V valine              6.7         29           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450 family 2 subfamily C polypeptide 18... 
CYP2C18               0.875   cytochrome P450 family 2 subfamily C polypeptide 18 ...
CYP2C19               0.800   cytochrome P450, family 2, subfamily C, polypeptide 1...
CYP2C9                0.708   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2E1                0.506   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP2A13               0.489   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2A6                0.477   cytochrome P450, family 2, subfamily A, polypeptide...
CYP2A7                0.475   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2B6                0.445   cytochrome P450, family 2, subfamily B, polypeptide 6...
CYP2C8                0.392   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2S1                0.387   cytochrome P450, family 2, subfamily S, polypeptide ...
CYP2A7                0.382   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2W1                0.327   cytochrome P450, family 2, subfamily W, polypeptide ...
CYP2J2                0.326   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP2R1                0.274   cytochrome P450, family 2, subfamily R, polypeptide ...
CYP2U1                0.259   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2F1                0.256   cytochrome P450, family 2, subfamily F, polypeptide ...
CYP2D6                0.252   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP1A1                0.211   cytochrome P450, family 1, subfamily A, polypeptide 1...
CYP2D6                0.205   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP1B1                0.203   cytochrome P450, family 1, subfamily B, polypeptide...
CYP1A2                0.187   cytochrome P450, family 1, subfamily A, polypeptide ...
CYP17A1               0.174   cytochrome P450, family 17 
CYP21A2               0.118   cytochrome P450, family 21, subfamily A, polypeptide...
CYP21A2               0.096   cytochrome P450, family 21, subfamily A, polypeptid...
CYP3A4                0.088   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP27C1               0.086   cytochrome P450, family 27, subfamily C, polypeptid...
CYP27B1               0.077   cytochrome P450, family 27, subfamily B, polypeptide ...
CYP3A5                0.076   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP24A1               0.075   cytochrome P450 family 24 subfamily A polypeptide 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press