Guide to the Human Genome
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Name: CYP2C8 Sequence: fasta or formatted (490aa) NCBI GI: 98991773
Description:

cytochrome P450, family 2, subfamily C, polypeptide 8

Referenced in:

Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         17           1
 C cysteine            2.9         14           1
 D aspartate           5.1         25           2
 E glutamate           5.3         26           2
 F phenylalanine       6.9         34           1
 G glycine             5.5         27           1
 H histidine           2.4         12           1
 I isoleucine          6.5         32           2
 K lysine              6.7         33           2
 L leucine             9.8         48           5
 M methionine          2.4         12           1
 N asparagine          6.1         30           2
 P proline             5.9         29           2
 Q glutamine           3.1         15           1
 R arginine            5.5         27           3
 S serine              5.7         28           2
 T threonine           6.3         31           2
 V valine              7.3         36           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 2, subfamily C, polypeptide ... 
CYP2C19               0.798   cytochrome P450, family 2, subfamily C, polypeptide 1...
CYP2C18               0.788   cytochrome P450 family 2 subfamily C polypeptide 18 ...
CYP2C9                0.787   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2E1                0.567   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP2A13               0.490   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2F1                0.490   cytochrome P450, family 2, subfamily F, polypeptide ...
CYP2B6                0.488   cytochrome P450, family 2, subfamily B, polypeptide 6...
CYP2A6                0.476   cytochrome P450, family 2, subfamily A, polypeptide...
CYP2A7                0.472   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2A7                0.393   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2S1                0.392   cytochrome P450, family 2, subfamily S, polypeptide ...
CYP2J2                0.352   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP2C18               0.343   cytochrome P450 family 2 subfamily C polypeptide 18...
CYP2D6                0.339   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP2W1                0.312   cytochrome P450, family 2, subfamily W, polypeptide ...
CYP2U1                0.291   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2R1                0.289   cytochrome P450, family 2, subfamily R, polypeptide ...
CYP2D6                0.283   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP1A1                0.213   cytochrome P450, family 1, subfamily A, polypeptide 1...
CYP1B1                0.208   cytochrome P450, family 1, subfamily B, polypeptide...
CYP1A2                0.183   cytochrome P450, family 1, subfamily A, polypeptide ...
CYP17A1               0.171   cytochrome P450, family 17 
CYP21A2               0.150   cytochrome P450, family 21, subfamily A, polypeptide...
CYP21A2               0.128   cytochrome P450, family 21, subfamily A, polypeptid...
CYP4V2                0.107   cytochrome P450, family 4, subfamily v, polypeptide...
CYP3A4                0.102   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A5                0.097   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A43               0.092   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A7                0.089   cytochrome P450, family 3, subfamily A, polypeptide 7...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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