Guide to the Human Genome
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Name: CYP1A2 Sequence: fasta or formatted (516aa) NCBI GI: 73915100
Description:

cytochrome P450, family 1, subfamily A, polypeptide 2

Referenced in:

Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         31           2
 C cysteine            1.4          7           2
 D aspartate           4.5         23           2
 E glutamate           5.0         26           2
 F phenylalanine       6.4         33           2
 G glycine             5.6         29           1
 H histidine           2.5         13           1
 I isoleucine          5.0         26           1
 K lysine              5.0         26           2
 L leucine            11.8         61           3
 M methionine          1.9         10           2
 N asparagine          3.5         18           1
 P proline             6.8         35           2
 Q glutamine           4.7         24           2
 R arginine            6.4         33           3
 S serine              7.8         40           4
 T threonine           5.6         29           2
 V valine              6.4         33           3
 W tryptophan          1.7          9           1
 Y tyrosine            1.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 1, subfamily A, polypeptide ... 
CYP1A1                0.723   cytochrome P450, family 1, subfamily A, polypeptide 1...
CYP1B1                0.318   cytochrome P450, family 1, subfamily B, polypeptide...
CYP2U1                0.226   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2J2                0.202   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP17A1               0.202   cytochrome P450, family 17 
CYP2D6                0.201   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP2A13               0.194   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2F1                0.189   cytochrome P450, family 2, subfamily F, polypeptide ...
CYP2A6                0.186   cytochrome P450, family 2, subfamily A, polypeptide...
CYP2C9                0.185   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2R1                0.184   cytochrome P450, family 2, subfamily R, polypeptide ...
CYP2E1                0.184   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP2C18               0.183   cytochrome P450 family 2 subfamily C polypeptide 18 ...
CYP2A7                0.178   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2B6                0.175   cytochrome P450, family 2, subfamily B, polypeptide 6...
CYP2C8                0.175   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2C19               0.168   cytochrome P450, family 2, subfamily C, polypeptide 1...
CYP2S1                0.164   cytochrome P450, family 2, subfamily S, polypeptide ...
CYP2C18               0.157   cytochrome P450 family 2 subfamily C polypeptide 18...
CYP2D6                0.156   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP2W1                0.147   cytochrome P450, family 2, subfamily W, polypeptide ...
CYP2A7                0.133   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP21A2               0.129   cytochrome P450, family 21, subfamily A, polypeptide...
CYP21A2               0.100   cytochrome P450, family 21, subfamily A, polypeptid...
CYP3A5                0.081   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A7                0.078   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP24A1               0.075   cytochrome P450 family 24 subfamily A polypeptide 1 ...
TBXAS1                0.075   thromboxane A synthase 1, platelet isoform TXS-I [H...
TBXAS1                0.075   thromboxane A synthase 1, platelet isoform TXS-I [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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