Guide to the Human Genome
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Name: CYP27C1 Sequence: fasta or formatted (372aa) NCBI GI: 167466231
Description:

cytochrome P450, family 27, subfamily C, polypeptide 1

Referenced in:

Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         20           2
 C cysteine            1.1          4           1
 D aspartate           4.0         15           1
 E glutamate           6.2         23           1
 F phenylalanine       4.6         17           2
 G glycine             6.5         24           2
 H histidine           2.7         10           1
 I isoleucine          6.2         23           1
 K lysine              4.6         17           1
 L leucine            12.1         45           2
 M methionine          1.9          7           1
 N asparagine          3.2         12           1
 P proline             4.8         18           1
 Q glutamine           4.6         17           2
 R arginine            8.1         30           2
 S serine              5.1         19           2
 T threonine           5.9         22           2
 V valine              8.1         30           2
 W tryptophan          1.3          5           1
 Y tyrosine            3.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 27, subfamily C, polypeptid... 
CYP27B1               0.379   cytochrome P450, family 27, subfamily B, polypeptide ...
CYP27A1               0.367   cytochrome P450, family 27, subfamily A, polypeptide ...
CYP24A1               0.254   cytochrome P450 family 24 subfamily A polypeptide 1 ...
CYP11B2               0.207   cytochrome P450, family 11, subfamily B, polypeptid...
CYP11A1               0.201   cytochrome P450, family 11, subfamily A, polypeptid...
CYP11B1               0.195   cytochrome P450, family 11, subfamily B, polypeptide...
CYP11A1               0.192   cytochrome P450, family 11, subfamily A, polypeptid...
CYP24A1               0.166   cytochrome P450 family 24 subfamily A polypeptide 1...
CYP3A5                0.145   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A4                0.136   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A43               0.133   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A7                0.133   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP3A43               0.133   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4V2                0.127   cytochrome P450, family 4, subfamily v, polypeptide...
CYP11B1               0.118   cytochrome P450, family 11, subfamily B, polypeptide...
CYP2E1                0.112   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP17A1               0.109   cytochrome P450, family 17 
CYP2C18               0.102   cytochrome P450 family 2 subfamily C polypeptide 18...
CYP2C18               0.102   cytochrome P450 family 2 subfamily C polypeptide 18 ...
CYP2R1                0.102   cytochrome P450, family 2, subfamily R, polypeptide ...
CYP2W1                0.102   cytochrome P450, family 2, subfamily W, polypeptide ...
CYP2U1                0.101   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2C19               0.097   cytochrome P450, family 2, subfamily C, polypeptide 1...
CYP21A2               0.097   cytochrome P450, family 21, subfamily A, polypeptid...
CYP21A2               0.097   cytochrome P450, family 21, subfamily A, polypeptide...
CYP2J2                0.097   cytochrome P450, family 2, subfamily J, polypeptide ...
TBXAS1                0.095   thromboxane A synthase 1, platelet isoform TXS-I [H...
TBXAS1                0.095   thromboxane A synthase 1, platelet isoform TXS-I [H...
CYP46A1               0.095   cytochrome P450, family 46 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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