Guide to the Human Genome
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Name: CYP2C18 Sequence: fasta or formatted (490aa) NCBI GI: 13699816
Description:

cytochrome P450 family 2 subfamily C polypeptide 18 isoform 1

Referenced in:

Cytochrome P450 Enzymes

Other entries for this name:
alt prot [431aa] cytochrome P450 family 2 subfamily C polypeptide 18 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         21           1
 C cysteine            3.1         15           1
 D aspartate           5.1         25           1
 E glutamate           6.3         31           2
 F phenylalanine       6.5         32           1
 G glycine             5.7         28           1
 H histidine           2.2         11           1
 I isoleucine          6.3         31           2
 K lysine              6.1         30           2
 L leucine            10.8         53           5
 M methionine          3.1         15           1
 N asparagine          5.1         25           2
 P proline             5.9         29           2
 Q glutamine           3.1         15           2
 R arginine            5.1         25           2
 S serine              6.3         31           2
 T threonine           5.1         25           2
 V valine              6.3         31           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.9         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450 family 2 subfamily C polypeptide 18 ... 
CYP2C9                0.849   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2C19               0.846   cytochrome P450, family 2, subfamily C, polypeptide 1...
CYP2C8                0.789   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2C18               0.768   cytochrome P450 family 2 subfamily C polypeptide 18...
CYP2E1                0.585   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP2F1                0.508   cytochrome P450, family 2, subfamily F, polypeptide ...
CYP2A13               0.493   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2A6                0.482   cytochrome P450, family 2, subfamily A, polypeptide...
CYP2B6                0.482   cytochrome P450, family 2, subfamily B, polypeptide 6...
CYP2A7                0.477   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2S1                0.400   cytochrome P450, family 2, subfamily S, polypeptide ...
CYP2A7                0.395   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2J2                0.346   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP2D6                0.324   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP2W1                0.310   cytochrome P450, family 2, subfamily W, polypeptide ...
CYP2U1                0.284   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2R1                0.281   cytochrome P450, family 2, subfamily R, polypeptide ...
CYP2D6                0.269   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP1B1                0.223   cytochrome P450, family 1, subfamily B, polypeptide...
CYP1A1                0.217   cytochrome P450, family 1, subfamily A, polypeptide 1...
CYP1A2                0.191   cytochrome P450, family 1, subfamily A, polypeptide ...
CYP17A1               0.180   cytochrome P450, family 17 
CYP21A2               0.135   cytochrome P450, family 21, subfamily A, polypeptide...
CYP21A2               0.115   cytochrome P450, family 21, subfamily A, polypeptid...
CYP3A4                0.094   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4V2                0.094   cytochrome P450, family 4, subfamily v, polypeptide...
CYP3A5                0.090   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A43               0.090   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A7                0.088   cytochrome P450, family 3, subfamily A, polypeptide 7...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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