Guide to the Human Genome
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Name: CYP2A13 Sequence: fasta or formatted (494aa) NCBI GI: 13699809
Description:

cytochrome P450, family 2, subfamily A, polypeptide 13

Referenced in:

Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         23           1
 C cysteine            0.6          3           1
 D aspartate           4.7         23           1
 E glutamate           6.5         32           3
 F phenylalanine       9.3         46           2
 G glycine             7.3         36           1
 H histidine           2.2         11           1
 I isoleucine          4.3         21           1
 K lysine              6.1         30           2
 L leucine            10.1         50           3
 M methionine          3.8         19           2
 N asparagine          3.6         18           1
 P proline             5.7         28           2
 Q glutamine           4.3         21           3
 R arginine            7.1         35           2
 S serine              5.7         28           2
 T threonine           5.7         28           2
 V valine              5.9         29           3
 W tryptophan          0.4          2           1
 Y tyrosine            2.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 2, subfamily A, polypeptide ... 
CYP2A6                0.937   cytochrome P450, family 2, subfamily A, polypeptide...
CYP2A7                0.915   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2A7                0.787   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2B6                0.539   cytochrome P450, family 2, subfamily B, polypeptide 6...
CYP2F1                0.513   cytochrome P450, family 2, subfamily F, polypeptide ...
CYP2C19               0.507   cytochrome P450, family 2, subfamily C, polypeptide 1...
CYP2C18               0.496   cytochrome P450 family 2 subfamily C polypeptide 18 ...
CYP2C8                0.494   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2C9                0.492   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2S1                0.466   cytochrome P450, family 2, subfamily S, polypeptide ...
CYP2E1                0.463   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP2C18               0.431   cytochrome P450 family 2 subfamily C polypeptide 18...
CYP2J2                0.376   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP2D6                0.307   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP2W1                0.298   cytochrome P450, family 2, subfamily W, polypeptide ...
CYP2U1                0.295   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2R1                0.294   cytochrome P450, family 2, subfamily R, polypeptide ...
CYP2D6                0.263   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP1A1                0.235   cytochrome P450, family 1, subfamily A, polypeptide 1...
CYP1B1                0.206   cytochrome P450, family 1, subfamily B, polypeptide...
CYP1A2                0.204   cytochrome P450, family 1, subfamily A, polypeptide ...
CYP17A1               0.175   cytochrome P450, family 17 
CYP21A2               0.129   cytochrome P450, family 21, subfamily A, polypeptide...
CYP21A2               0.102   cytochrome P450, family 21, subfamily A, polypeptid...
CYP3A4                0.095   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4V2                0.094   cytochrome P450, family 4, subfamily v, polypeptide...
CYP3A43               0.091   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A43               0.086   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A5                0.085   cytochrome P450, family 3, subfamily A, polypeptide 5...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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