Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CYP1B1 Sequence: fasta or formatted (543aa) NCBI GI: 189491763
Description:

cytochrome P450, family 1, subfamily B, polypeptide 1

Referenced in:

MicroRNAs
Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         48           3
 C cysteine            1.5          8           1
 D aspartate           5.0         27           2
 E glutamate           4.2         23           2
 F phenylalanine       6.3         34           2
 G glycine             5.9         32           3
 H histidine           2.8         15           1
 I isoleucine          3.1         17           1
 K lysine              2.8         15           2
 L leucine            11.2         61           5
 M methionine          2.6         14           2
 N asparagine          4.4         24           1
 P proline             6.3         34           2
 Q glutamine           5.0         27           2
 R arginine            8.1         44           3
 S serine              7.0         38           2
 T threonine           4.2         23           2
 V valine              7.9         43           2
 W tryptophan          1.3          7           1
 Y tyrosine            1.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 1, subfamily B, polypeptide... 
CYP1A1                0.320   cytochrome P450, family 1, subfamily A, polypeptide 1...
CYP1A2                0.303   cytochrome P450, family 1, subfamily A, polypeptide ...
CYP2U1                0.230   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2J2                0.207   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP2D6                0.204   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP2C18               0.204   cytochrome P450 family 2 subfamily C polypeptide 18 ...
CYP2B6                0.202   cytochrome P450, family 2, subfamily B, polypeptide 6...
CYP2C9                0.199   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2C19               0.192   cytochrome P450, family 2, subfamily C, polypeptide 1...
CYP2C8                0.191   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2A13               0.187   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2F1                0.186   cytochrome P450, family 2, subfamily F, polypeptide ...
CYP2R1                0.182   cytochrome P450, family 2, subfamily R, polypeptide ...
CYP2D6                0.177   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP2A6                0.174   cytochrome P450, family 2, subfamily A, polypeptide...
CYP2E1                0.173   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP2S1                0.171   cytochrome P450, family 2, subfamily S, polypeptide ...
CYP2A7                0.170   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP17A1               0.169   cytochrome P450, family 17 
CYP2W1                0.166   cytochrome P450, family 2, subfamily W, polypeptide ...
CYP2C18               0.163   cytochrome P450 family 2 subfamily C polypeptide 18...
CYP2A7                0.126   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP21A2               0.118   cytochrome P450, family 21, subfamily A, polypeptide...
CYP21A2               0.091   cytochrome P450, family 21, subfamily A, polypeptid...
CYP24A1               0.069   cytochrome P450 family 24 subfamily A polypeptide 1 ...
CYP3A5                0.063   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A4                0.060   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A7                0.056   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP27C1               0.056   cytochrome P450, family 27, subfamily C, polypeptid...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press