Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CYP2R1 Sequence: fasta or formatted (501aa) NCBI GI: 45267826
Description:

cytochrome P450, family 2, subfamily R, polypeptide 1

Referenced in:

Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         31           3
 C cysteine            1.2          6           1
 D aspartate           4.2         21           2
 E glutamate           6.4         32           2
 F phenylalanine       7.8         39           2
 G glycine             7.0         35           2
 H histidine           3.0         15           1
 I isoleucine          5.4         27           2
 K lysine              5.0         25           2
 L leucine            11.4         57           3
 M methionine          2.8         14           1
 N asparagine          3.8         19           1
 P proline             5.8         29           2
 Q glutamine           3.8         19           2
 R arginine            5.6         28           2
 S serine              5.6         28           2
 T threonine           4.0         20           3
 V valine              6.0         30           2
 W tryptophan          1.4          7           1
 Y tyrosine            3.8         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 2, subfamily R, polypeptide ... 
CYP2J2                0.376   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP2U1                0.353   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2D6                0.305   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP2F1                0.302   cytochrome P450, family 2, subfamily F, polypeptide ...
CYP2A13               0.286   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2W1                0.286   cytochrome P450, family 2, subfamily W, polypeptide ...
CYP2C8                0.283   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2E1                0.276   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP2C18               0.275   cytochrome P450 family 2 subfamily C polypeptide 18 ...
CYP2C19               0.273   cytochrome P450, family 2, subfamily C, polypeptide 1...
CYP2A7                0.272   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2A6                0.270   cytochrome P450, family 2, subfamily A, polypeptide...
CYP2B6                0.268   cytochrome P450, family 2, subfamily B, polypeptide 6...
CYP2C9                0.267   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2D6                0.261   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP2C18               0.235   cytochrome P450 family 2 subfamily C polypeptide 18...
CYP2S1                0.233   cytochrome P450, family 2, subfamily S, polypeptide ...
CYP2A7                0.226   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP1B1                0.195   cytochrome P450, family 1, subfamily B, polypeptide...
CYP1A1                0.191   cytochrome P450, family 1, subfamily A, polypeptide 1...
CYP1A2                0.188   cytochrome P450, family 1, subfamily A, polypeptide ...
CYP17A1               0.188   cytochrome P450, family 17 
CYP21A2               0.157   cytochrome P450, family 21, subfamily A, polypeptide...
CYP21A2               0.134   cytochrome P450, family 21, subfamily A, polypeptid...
CYP3A4                0.102   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A5                0.099   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A7                0.094   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP4V2                0.089   cytochrome P450, family 4, subfamily v, polypeptide...
CYP4Z1                0.087   cytochrome P450 4Z1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press