Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CYP2B6 Sequence: fasta or formatted (491aa) NCBI GI: 7949031
Description:

cytochrome P450, family 2, subfamily B, polypeptide 6

Referenced in:

Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         27           1
 C cysteine            1.0          5           1
 D aspartate           4.1         20           1
 E glutamate           6.7         33           2
 F phenylalanine       7.9         39           2
 G glycine             6.3         31           1
 H histidine           3.7         18           1
 I isoleucine          5.7         28           2
 K lysine              4.9         24           2
 L leucine            12.8         63           5
 M methionine          2.6         13           1
 N asparagine          3.1         15           1
 P proline             6.3         31           2
 Q glutamine           3.7         18           1
 R arginine            6.5         32           2
 S serine              5.1         25           2
 T threonine           5.3         26           2
 V valine              5.3         26           2
 W tryptophan          0.2          1           1
 Y tyrosine            3.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 2, subfamily B, polypeptide 6... 
CYP2A13               0.542   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2A7                0.522   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2A6                0.519   cytochrome P450, family 2, subfamily A, polypeptide...
CYP2C8                0.494   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2C18               0.487   cytochrome P450 family 2 subfamily C polypeptide 18 ...
CYP2C9                0.487   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2C19               0.481   cytochrome P450, family 2, subfamily C, polypeptide 1...
CYP2F1                0.481   cytochrome P450, family 2, subfamily F, polypeptide ...
CYP2S1                0.469   cytochrome P450, family 2, subfamily S, polypeptide ...
CYP2E1                0.454   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP2A7                0.424   cytochrome P450, family 2, subfamily A, polypeptide ...
CYP2C18               0.394   cytochrome P450 family 2 subfamily C polypeptide 18...
CYP2J2                0.369   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP2D6                0.329   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP2W1                0.303   cytochrome P450, family 2, subfamily W, polypeptide ...
CYP2U1                0.291   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2R1                0.277   cytochrome P450, family 2, subfamily R, polypeptide ...
CYP2D6                0.274   cytochrome P450, family 2, subfamily D, polypeptide ...
CYP1B1                0.223   cytochrome P450, family 1, subfamily B, polypeptide...
CYP1A1                0.215   cytochrome P450, family 1, subfamily A, polypeptide 1...
CYP1A2                0.185   cytochrome P450, family 1, subfamily A, polypeptide ...
CYP17A1               0.162   cytochrome P450, family 17 
CYP21A2               0.141   cytochrome P450, family 21, subfamily A, polypeptide...
CYP21A2               0.119   cytochrome P450, family 21, subfamily A, polypeptid...
CYP4V2                0.105   cytochrome P450, family 4, subfamily v, polypeptide...
CYP3A5                0.104   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A43               0.102   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A4                0.100   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A43               0.098   cytochrome P450, family 3, subfamily A, polypeptide ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press