Guide to the Human Genome
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Name: TOMM40L Sequence: fasta or formatted (308aa) NCBI GI: 21362030
Description:

translocase of outer mitochondrial membrane 40 homolog-like

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         26           2
 C cysteine            1.0          3           1
 D aspartate           3.6         11           2
 E glutamate           4.9         15           2
 F phenylalanine       4.9         15           1
 G glycine             9.4         29           2
 H histidine           4.9         15           1
 I isoleucine          1.6          5           1
 K lysine              2.6          8           2
 L leucine            12.7         39           4
 M methionine          2.6          8           1
 N asparagine          3.9         12           1
 P proline             5.2         16           2
 Q glutamine           4.2         13           2
 R arginine            5.2         16           2
 S serine              5.5         17           2
 T threonine           6.2         19           2
 V valine              8.8         27           2
 W tryptophan          1.6          5           1
 Y tyrosine            2.9          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocase of outer mitochondrial membrane 40 homol... 
TOMM40                0.616   translocase of outer mitochondrial membrane 40 [Hom...
TOMM40                0.616   translocase of outer mitochondrial membrane 40 [Hom...
TOMM40                0.616   translocase of outer mitochondrial membrane 40 
FANCI                 0.008   Fanconi anemia, complementation group I isoform 1 [...
FANCI                 0.008   Fanconi anemia, complementation group I isoform 2 [H...
PTPRG                 0.008   protein tyrosine phosphatase, receptor type, G prec...
ZNF469                0.005   zinc finger protein 469 
IARS2                 0.005   mitochondrial isoleucine tRNA synthetase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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