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Search of human proteins with 190610010
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|190610010 hypothetical protein LOC317761 [Homo sapiens]
(587 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|190610010 hypothetical protein LOC317761 [Homo sapiens] 1187 0.0
gi|83715968 sarcoma antigen NY-SAR-79 [Homo sapiens] 50 6e-06
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 48 2e-05
gi|55770834 centromere protein F [Homo sapiens] 46 8e-05
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 46 1e-04
gi|51972208 leucine, glutamate and lysine rich 1 [Homo sapiens] 45 1e-04
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 45 2e-04
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 44 5e-04
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 44 5e-04
gi|225579092 S-phase cyclin A-associated protein in the ER isofo... 44 5e-04
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 43 0.001
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 43 0.001
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 42 0.001
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] 42 0.001
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 42 0.002
gi|64085252 hypothetical protein LOC145508 [Homo sapiens] 42 0.002
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 42 0.002
gi|14165274 golgi-associated microtubule-binding protein HOOK3 [... 42 0.002
gi|33946313 ninein isoform 4 [Homo sapiens] 42 0.002
gi|33946321 ninein isoform 5 [Homo sapiens] 42 0.002
gi|148536871 ninein isoform 1 [Homo sapiens] 42 0.002
gi|148536869 ninein isoform 2 [Homo sapiens] 42 0.002
gi|71061468 centromere protein E [Homo sapiens] 41 0.003
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 41 0.003
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 41 0.003
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 40 0.006
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 40 0.006
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 40 0.006
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 40 0.006
gi|110815815 centlein isoform 1 [Homo sapiens] 40 0.008
>gi|190610010 hypothetical protein LOC317761 [Homo sapiens]
Length = 587
Score = 1187 bits (3071), Expect = 0.0
Identities = 587/587 (100%), Positives = 587/587 (100%)
Query: 1 MNDSLFVSLDRLLLEFVFQYEQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDE 60
MNDSLFVSLDRLLLEFVFQYEQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDE
Sbjct: 1 MNDSLFVSLDRLLLEFVFQYEQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDE 60
Query: 61 EIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKE 120
EIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKE
Sbjct: 61 EIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKE 120
Query: 121 VLKQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTK 180
VLKQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTK
Sbjct: 121 VLKQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTK 180
Query: 181 WTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETL 240
WTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETL
Sbjct: 181 WTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETL 240
Query: 241 EEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADI 300
EEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADI
Sbjct: 241 EEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADI 300
Query: 301 KEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLTPQKQ 360
KEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLTPQKQ
Sbjct: 301 KEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLTPQKQ 360
Query: 361 SNSNQWSEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGKSIENDSDEVEERAENFPR 420
SNSNQWSEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGKSIENDSDEVEERAENFPR
Sbjct: 361 SNSNQWSEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGKSIENDSDEVEERAENFPR 420
Query: 421 TSEIPIFLGTPKAVKAPESLEKIKFPKTPPFEINRNRNAVPEVQTEKESPGLSFLMSYTS 480
TSEIPIFLGTPKAVKAPESLEKIKFPKTPPFEINRNRNAVPEVQTEKESPGLSFLMSYTS
Sbjct: 421 TSEIPIFLGTPKAVKAPESLEKIKFPKTPPFEINRNRNAVPEVQTEKESPGLSFLMSYTS 480
Query: 481 RSPGLNLFDSSVFDTEISSDQFNEHYSARNLNPLSSEQEIGNLLEKPEGEDGFTFSFPSD 540
RSPGLNLFDSSVFDTEISSDQFNEHYSARNLNPLSSEQEIGNLLEKPEGEDGFTFSFPSD
Sbjct: 481 RSPGLNLFDSSVFDTEISSDQFNEHYSARNLNPLSSEQEIGNLLEKPEGEDGFTFSFPSD 540
Query: 541 TSTHTFGAGKDDFSFPFSFGQGQNSIPSSSLKGFSSSSQNTTQFTFF 587
TSTHTFGAGKDDFSFPFSFGQGQNSIPSSSLKGFSSSSQNTTQFTFF
Sbjct: 541 TSTHTFGAGKDDFSFPFSFGQGQNSIPSSSLKGFSSSSQNTTQFTFF 587
>gi|83715968 sarcoma antigen NY-SAR-79 [Homo sapiens]
Length = 1079
Score = 50.1 bits (118), Expect = 6e-06
Identities = 128/597 (21%), Positives = 233/597 (39%), Gaps = 111/597 (18%)
Query: 4 SLFVSLDRLLL--EFVFQYEQDISTKEEMIQRINKCCEDIKENKVTICRIHETINAT--- 58
SL +L+ L + E YE+ I Q + E ++ K T+ H+ A
Sbjct: 33 SLLEALEELRMRREAEIHYEEQIGKIIVETQELKWQKETLQNQKETLAEQHKEAMAVFKK 92
Query: 59 ---------DEEIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKE 109
+EE Y +E + K T + + +Q + + + V+
Sbjct: 93 QLQMKMCALEEEKGKYQLATEIKEKEIEGLKETLKALQVSKYSLQKKVSEMEQKVQLHLL 152
Query: 110 MYHDYICQYKEVLKQYQLKYSETPFSREYYEKKREH--EEIQSR-------------VLA 154
DY Q E+ K Y + +E +EK ++ E IQS + +
Sbjct: 153 AKEDYHKQLSEIEKYYATITGQFGLVKENHEKLEQNVREAIQSNKRLSALNKKQEAEICS 212
Query: 155 CTEQLKMNETIFMKFRVPAPFPSLTKWTLNIVNLRCETQDILKHASNLTKSSSELKKEV- 213
++LK + +K +V + + + +N+ + Q++ + + + + ++ +E+
Sbjct: 213 LKKELKKAASDLIKSKVTCQY-KMGEENINLTIKEQKFQELQERLNMELELNEKINEEIT 271
Query: 214 ----DEMEIEINY------LNQQISRHNETKALSETLEEKNKNTENRKEL-KERIFGKDE 262
++ +I I++ L QQI + E +A + L+E N+ E EL +E++ +E
Sbjct: 272 HIQEEKQDIIISFQHMQQLLRQQIQANTEMEAELKVLKENNQTLERDNELQREKVKENEE 331
Query: 263 HVLTLNKTQSSQLFLPYESQKLVRPIKMHSSE--PRVADIKEE-SSAKQSKLANIDFRQK 319
L L E +K + K H+ E + IK E SS K++ + + K
Sbjct: 332 KFLNLQN----------EHEKALGTWKRHAEELNGEINKIKNELSSLKETHIKLQEHYNK 381
Query: 320 -------ENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLTPQKQSNSNQWSEKGDK 372
E D + N V+N + S ++T S +Q + T Q+ N E
Sbjct: 382 LCNQKTFEEDKKFQNVPEVNNEN--SEMSTEKSENTIIQ-KYNTEQEIREENM--ENFCS 436
Query: 373 DAEYGDKGTVRQVRESKCTSQAIY--TEHFGKSIENDSDEVEERAENFPRTSEIPIFLGT 430
D EY +K + +E + I + F KS +N+ D V + EN SEI
Sbjct: 437 DTEYREK---EEKKEGSFIEEIIIDDLQLFEKSFKNEIDTVVSQDEN---QSEI------ 484
Query: 431 PKAVKAPESLEKIKFPKTPPFEINRNRNAV-PEVQ-----------TEKESPGLSFLMSY 478
++ SL+K + + NR +V E++ TE +SP F++
Sbjct: 485 --SLSKTLSLDKEVISQGQTSNVTDNRKSVTTEIKDKICLEKDNGCTEFKSPNNHFVVLD 542
Query: 479 TS---------RSPGLNLFDSSV-FDTEISSDQFNE------HYSARNLNPLSSEQE 519
T+ R+ GL++ + V + E + FN H + N N SE E
Sbjct: 543 TAIETEKIHLERTRGLDVHHTDVNLEVENNKTSFNSILNETAHNTYHNNNKDVSENE 599
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 48.1 bits (113), Expect = 2e-05
Identities = 78/414 (18%), Positives = 166/414 (40%), Gaps = 45/414 (10%)
Query: 27 KEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKDNCRNWKPTCDVF 86
KEEM + I E+ + T+ + E + ++ + ++K + + +
Sbjct: 1087 KEEMNKEITWLKEEGVKQDTTLNELQEQLKQKSAHVNSLAQDETKLKAHLEKLEVDLNKS 1146
Query: 87 RKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQ-LKYSETPFSREYYEKKREH 145
K ++Q+Q + E+DK + + K +++Q LK S ++ +K E
Sbjct: 1147 LKENTFLQEQLVELKMLAEEDKRKVSELTSKLKTTDEEFQSLKSSHEKSNKSLEDKSLEF 1206
Query: 146 EEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNIVNLRCETQDILKHASNLTKS 205
+++ +E+L + I K + A + T +NI + +T IL S+
Sbjct: 1207 KKL-------SEELAIQLDICCK-KTEALLEAKTNELINISS--SKTNAILSRISHCQHR 1256
Query: 206 SSELKK-------EVDEMEIEINYLNQQISRHN-ETKALSETLEEKNKNTENRKELKERI 257
++++K+ V E+E ++ L ++ + N + + LEEK ++ K E +
Sbjct: 1257 TTKVKEALLIKTCTVSELEAQLRQLTEEQNTLNISFQQATHQLEEKENQIKSMKADIESL 1316
Query: 258 FGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSE--PRVADIKEESSAKQSKLANID 315
+ E L K +Q E + + +K SE V +KEE K+ +++++
Sbjct: 1317 VTEKE---ALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKVEISSLS 1373
Query: 316 FRQKENDTQIFNDSAVD-------------NHSKCSHITTITSSQKFMQVRLLTPQKQSN 362
+ + + Q+ N ++ + KC + + +V L+ +K S
Sbjct: 1374 KQLTDLNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQVQDLS--FKVDTLSKEKISA 1431
Query: 363 SNQWSEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGKSIENDSDEVEERAE 416
Q + +K +E+ K +S+ T + +E S E E+ E
Sbjct: 1432 LEQVDDWSNKFSEWKKKA------QSRFTQHQNTVKELQIQLELKSKEAYEKDE 1479
Score = 41.2 bits (95), Expect = 0.003
Identities = 76/408 (18%), Positives = 167/408 (40%), Gaps = 38/408 (9%)
Query: 21 EQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKDNCRNWK 80
+Q + +E +++R C E I+ +K + A E++D + E+IKD K
Sbjct: 285 QQRVKRQENLLKR---CKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKIKDLHMAEK 341
Query: 81 PTC-----DVFRKHEDYMQDQFTVYQGT---VEKDKEMYHDYICQYKEVLKQYQLKYSET 132
D E QD+ V T + + EM + I Q + +KQ + E
Sbjct: 342 TKLITQLRDAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEEL 401
Query: 133 PFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWT-LNIVNLRCE 191
+E E + EE++ + T Q +K + ++ K + ++L+ E
Sbjct: 402 REQKEKSE-RAAFEELEKAL--STAQKTEEARRKLKAEMDEQIKTIEKTSEEERISLQQE 458
Query: 192 TQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTENRK 251
+ + ++ K SSE E ++ L+++ E + L++ L+ + + E ++
Sbjct: 459 LSRVKQEVVDVMKKSSE------EQIAKLQKLHEKELARKE-QELTKKLQTRER--EFQE 509
Query: 252 ELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESSAKQSKL 311
++K + L +++ + Q L E +L + + SE ++ D+++E+ ++++
Sbjct: 510 QMKVALEKSQSEYLKISQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRI 569
Query: 312 ANIDF---------RQKENDTQIFNDSAVDNHSK-----CSHITTITSSQKFMQVRLLTP 357
++ + + D + ++ + H+K T S K Q L T
Sbjct: 570 LELESSLEKSLQENKNQSKDLAVHLEAEKNKHNKEITVMVEKHKTELESLKHQQDALWTE 629
Query: 358 QKQSNSNQWSEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGKSIE 405
+ Q Q+ + +K E ++ +++ + QA E K++E
Sbjct: 630 KLQVLKQQYQTEMEKLREKCEQEKETLLKDKEIIFQAHIEEMNEKTLE 677
Score = 40.0 bits (92), Expect = 0.006
Identities = 69/317 (21%), Positives = 129/317 (40%), Gaps = 60/317 (18%)
Query: 8 SLDRLLLEFVFQYEQDIST--KEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHY 65
SL + L + Q + IS KE I + K ++ K C + + + ++D
Sbjct: 1371 SLSKQLTDLNVQLQNSISLSEKEAAISSLRKQYDEEK------CELLDQVQDLSFKVDTL 1424
Query: 66 CKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQY 125
K + +W + F + + Q +FT +Q TV KE+ Q
Sbjct: 1425 SKEKISALEQVDDWS---NKFSEWKKKAQSRFTQHQNTV--------------KELQIQL 1467
Query: 126 QLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIF--MKFRVPAPFPSLTKWTL 183
+LK S+E YEK + ++ E+L F +K + + K
Sbjct: 1468 ELK------SKEAYEKDEQINLLK-------EELDQQNKRFDCLKGEMEDDKSKMEKKES 1514
Query: 184 NI-VNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKAL--SETL 240
N+ L+ +T I+ EL+ + + IEI LN+ + +N+ K + E +
Sbjct: 1515 NLETELKSQTARIM-----------ELEDHITQKTIEIESLNEVLKNYNQQKDIEHKELV 1563
Query: 241 EEKNKNTENRKELKERIFGKDEHVLTL-NKTQSSQLFLPYESQKLVR---PIKMHSSEPR 296
++ E +E R+ +E +LTL N+ S + L + ++L +K E +
Sbjct: 1564 QKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKELEHVNLSVKSKEEELK 1623
Query: 297 VAD--IKEESSAKQSKL 311
+ ++ ES+AK ++L
Sbjct: 1624 ALEDRLESESAAKLAEL 1640
Score = 33.9 bits (76), Expect = 0.43
Identities = 70/383 (18%), Positives = 149/383 (38%), Gaps = 37/383 (9%)
Query: 2 NDSLFVSLDRLLLEFVFQYEQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDEE 61
++ L +S ++ E + E ++ K + + NK + +E + RI E ++ ++
Sbjct: 520 SEYLKISQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLEKS 579
Query: 62 IDHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEV 121
+ S+++ + K KH + ++ +E K + +V
Sbjct: 580 LQENKNQSKDLAVHLEAEK------NKHNKEITVMVEKHKTELESLKHQQDALWTEKLQV 633
Query: 122 LKQ-YQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTK 180
LKQ YQ + + RE E+++E ++ +MNE K V
Sbjct: 634 LKQQYQTEMEKL---REKCEQEKETLLKDKEIIFQAHIEEMNEKTLEKLDVKQT------ 684
Query: 181 WTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETL 240
+ +L E ++LK L + S LK + D+M+ E+ + H++ + S
Sbjct: 685 ---ELESLSSELSEVLKARHKLEEELSVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIK 741
Query: 241 EEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADI 300
E + K LK++I ++ L L + + L IK E + A
Sbjct: 742 EHEVSIQRTEKALKDQI---NQLELLLKERDKHLKEHQAHVENLEADIKRSEGELQQASA 798
Query: 301 K------------EESSAKQSKLANIDFRQKENDTQ--IFNDSAVDNHSKCSHITTITSS 346
K E++ A + +LA + + + +T+ + + ++ + T +
Sbjct: 799 KLDVFQSYQSATHEQTKAYEEQLAQLQQKLLDLETERILLTKQVAEVEAQKKDVCTELDA 858
Query: 347 QKFMQVRLLTPQKQSNSNQWSEK 369
K +QV+ L Q + +++ +K
Sbjct: 859 HK-IQVQDLMQQLEKQNSEMEQK 880
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 46.2 bits (108), Expect = 8e-05
Identities = 97/441 (21%), Positives = 173/441 (39%), Gaps = 57/441 (12%)
Query: 13 LLEFVFQYEQDISTKEEMIQRINKCCEDI---KENKVTI-CRIHETINATD----EEIDH 64
L+ QY+Q + + Q++ K ED+ ++N + C + + I + EE+
Sbjct: 343 LVRTTAQYDQASTKYTALEQKLKKLTEDLSCQRQNAESARCSLEQKIKEKEKEFQEELSR 402
Query: 65 YCKHSEEIKDNCRNWKPTCDVFRKHEDYMQ-------DQFTVYQGTVEKDKEMYHDYICQ 117
+ + + C K + M D+ T + +E + E + +C+
Sbjct: 403 QQRSFQTLDQECIQMKARLTQELQQAKNMHNVLQAELDKLTSVKQQLENNLEEFKQKLCR 462
Query: 118 YKEVLKQYQLKYSETPFSREYYEKK----REHEEIQSRVLACTEQLKMNETIFMKFRVPA 173
++ + Q+K +E S E +K+ + H E ++R + E N +
Sbjct: 463 AEQAFQASQIKENELRRSMEEMKKENNLLKSHSEQKAREVCHLEAELKNIKQCLNQSQNF 522
Query: 174 PFPSLTKWTLNIVNLRCETQDILKHASNLTKSS-----SELKKEVD-------EMEIEIN 221
K T LR + I + ++LT ++L+K+ D + E I
Sbjct: 523 AEEMKAKNTSQETMLRDLQEKINQQENSLTLEKLKLAVADLEKQRDCSQDLLKKREHHIE 582
Query: 222 YLNQQISR-HNETKALSETLEEKNKNTENRKELKERIF---GKDEHVLTLNKTQSSQL-- 275
LN ++S+ E+KAL LE K K E KE K ++E +LT +++ L
Sbjct: 583 QLNDKLSKTEKESKALLSALELKKKEYEELKEEKTLFSCWKSENEKLLTQMESEKENLQS 642
Query: 276 -FLPYESQKLVRPIKMHSSEPRVADI---KEESSAKQSKLANI-DFRQKENDTQIF---- 326
E+ + IK H RV + +E S + L N+ D + E +TQ
Sbjct: 643 KINHLETCLKTQQIKSHEYNERVRTLEMDRENLSVEIRNLHNVLDSKSVEVETQKLAYME 702
Query: 327 ----NDSAVDNHSKCSHITTITSSQKFMQVRLLTPQKQSNSNQWSEKG----DKDAEYGD 378
+ + H K + +SQ QV L + Q SN+ +K D AEY
Sbjct: 703 LQQKAEFSDQKHQKEIENMCLKTSQLTGQVEDLEHKLQLLSNEIMDKDRCYQDLHAEY-- 760
Query: 379 KGTVRQVRESKCTSQAIYTEH 399
++R + +SK S +H
Sbjct: 761 -ESLRDLLKSKDASLVTNEDH 780
Score = 39.7 bits (91), Expect = 0.008
Identities = 53/272 (19%), Positives = 115/272 (42%), Gaps = 44/272 (16%)
Query: 9 LDRLLLEFVFQYEQ----DISTKEEM---IQRINKCCEDIKENKVTICRIHETINATDEE 61
LD+LL F E+ +I KEE ++ + +++ E +C E + AT++
Sbjct: 2229 LDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKELNEAVAALCGDQEIMKATEQS 2288
Query: 62 IDHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEV 121
+D + +++++ + + K + + Q K+ E + D + E
Sbjct: 2289 LDPPIEEEHQLRNSIEKLRARLEADEKKQLCVLQQL--------KESEHHADLLKGRVEN 2340
Query: 122 LKQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKW 181
L++ +L+ + T +EH +++ + E +K ++ SL
Sbjct: 2341 LER-ELEIART---------NQEHAALEA-------ENSKGEVETLKAKIEGMTQSLRGL 2383
Query: 182 TLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLE 241
L++V +R E + NLT + ++ + E+EI IN + I + E E ++
Sbjct: 2384 ELDVVTIRSEKE-------NLTNELQKEQERISELEI-INSSFENILQEKE----QEKVQ 2431
Query: 242 EKNKNTENRKELKERIFGKDEHVLTLNKTQSS 273
K K++ + L+ ++ +E V L+ Q +
Sbjct: 2432 MKEKSSTAMEMLQTQLKELNERVAALHNDQEA 2463
Score = 33.1 bits (74), Expect = 0.73
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 39/211 (18%)
Query: 12 LLLEFVFQYEQDISTKEEMIQRINKCC--------------EDIKENKVTICRIHETINA 57
LLL+ QYE +I T E + +C E++ + +I E +
Sbjct: 2713 LLLDTNKQYEVEIQTYREKLTSKEECLSSQKLEIDLLKSSKEELNNSLKATTQILEELKK 2772
Query: 58 TDEE----IDHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDK----- 108
T + ++ K +E + + +C + ++ +Q + + Q EK K
Sbjct: 2773 TKMDNLKYVNQLKKENERAQGKMKLLIKSCKQLEEEKEILQKELSQLQAAQEKQKTGTVM 2832
Query: 109 ----EMYHDYICQYKEVLK-------QYQLKYSETPFSREYYEKKREHEEIQSRVLACTE 157
+ I + KE L+ +Y KY S E EK +E E Q L C++
Sbjct: 2833 DTKVDELTTEIKELKETLEEKTKEADEYLDKYCSLLISHEKLEKAKEMLETQVAHL-CSQ 2891
Query: 158 QLKMNE----TIFMKFRVPAPFPSLTKWTLN 184
Q K + + P+P PS+T+ L+
Sbjct: 2892 QSKQDSRGSPLLGPVVPGPSPIPSVTEKRLS 2922
Score = 32.7 bits (73), Expect = 0.95
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 208 ELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTENRKELKERIFGKDEHVLTL 267
EL+ E+E +I L + + +T E L+ KN EN EL + K V +
Sbjct: 2557 ELRNLTVELEQKIQVLQSKNASLQDTL---EVLQSSYKNLENELELTK--MDKMSFVEKV 2611
Query: 268 NKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESSAKQSKLA 312
NK + + L E MH + A+++EE S ++++LA
Sbjct: 2612 NKMTAKETELQRE---------MHEMAQKTAELQEELSGEKNRLA 2647
Score = 30.8 bits (68), Expect = 3.6
Identities = 41/195 (21%), Positives = 78/195 (40%), Gaps = 18/195 (9%)
Query: 187 NLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKN 246
NL+ E Q +++ +L K+ ++ E+ E ++N+ Q+ N K E LE++ K
Sbjct: 64 NLKRENQRLMEICESLEKTKQKISHELQVKESQVNFQEGQL---NSGKKQIEKLEQELKR 120
Query: 247 TENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKE---- 302
++ E ++ + L T P + P + +S + D+KE
Sbjct: 121 CKSELERSQQAAQSADVSLNPCNTPQKIFTTP------LTPSQYYSGS-KYEDLKEKYNK 173
Query: 303 ESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLTPQK-QS 361
E ++ A + Q + +Q + +++ H SS F + TP S
Sbjct: 174 EVEERKRLEAEVKALQAKKASQTLPQATMNHRDIARH---QASSSVFSWQQEKTPSHLSS 230
Query: 362 NSNQWSEKGDKDAEY 376
NS + + D A Y
Sbjct: 231 NSQRTPIRRDFSASY 245
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 45.8 bits (107), Expect = 1e-04
Identities = 72/411 (17%), Positives = 153/411 (37%), Gaps = 82/411 (19%)
Query: 23 DISTKEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHSE-------EIKDN 75
DIS ++ +Q + ++E + + + +N +++ H KH + ++ +
Sbjct: 1851 DISAMQQQLQEKREAVNSLQEE---LANVQDHLNLAKQDLLHTTKHQDVLLSEQTRLQKD 1907
Query: 76 CRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFS 135
W + +K E+ Q Q V Q +E++K +L E F
Sbjct: 1908 ISEWANRFEDCQKEEETKQQQLQVLQNEIEENK----------------LKLVQQEMMFQ 1951
Query: 136 REYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNIVNLRCETQDI 195
R E++ E ++++ + EQ
Sbjct: 1952 RLQKERESEESKLETSKVTLKEQ------------------------------------- 1974
Query: 196 LKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTENR-KELK 254
L K ++ K ++D++ ++ +++ E + E+LE+ T+ + E +
Sbjct: 1975 ---QHQLEKELTDQKSKLDQVLSKVLAAEERVRTLQEEERWCESLEKTLSQTKRQLSERE 2031
Query: 255 ERIFGKDEHVLTLNKTQSSQL--FLPYESQKLVRPIKMHSSEPRVADIKEESSAKQSKLA 312
+++ K +L L K S F +Q L K +E +VA +KE ++S+L
Sbjct: 2032 QQLVEKSGELLALQKEADSMRADFSLLRNQFLTERKK---AEKQVASLKEALKIQRSQLE 2088
Query: 313 NIDFRQKENDTQIFNDSAV------DNHSKCSHITTITSSQKFMQVRLLTPQKQSNSNQW 366
QK+ ++ I + A DNH + + + ++ L +KQ + +
Sbjct: 2089 KNLLEQKQENSCIQKEMATIELVAQDNHERARRLMKELNQMQYEYTEL---KKQMANQKD 2145
Query: 367 SEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGKSIENDSDEVEERAEN 417
E+ + + +V++ TS + F + D + + ER EN
Sbjct: 2146 LERRQMEISDAMRTLKSEVKDEIRTSLKNLNQ-FLPELPADLEAILERNEN 2195
Score = 40.8 bits (94), Expect = 0.004
Identities = 63/280 (22%), Positives = 115/280 (41%), Gaps = 44/280 (15%)
Query: 19 QYEQDISTKEEMIQR----INKCCEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKD 74
+ + D++TK E++++ + + C+ E + + I+A E +++Y EI D
Sbjct: 323 ELKSDLNTKNELLKQKTIELTRACQKQYELEQELA--FYKIDAKFEPLNYYPSEYAEI-D 379
Query: 75 NCRNWKPTCDVFRKH------EDYMQDQFTVYQ-GTVEKDKEMYHDYICQYKEVLKQYQL 127
+ P R E Y+ D Q +E D+++ +D++ QL
Sbjct: 380 KAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPDEQLRNDHMNLRGHTPLDTQL 439
Query: 128 KYSETPFSREYYEKKREHEEIQS---RVLACTEQLK-MNETIFMKFRVPAPFPSLTKWT- 182
+ E S H+EI+ ++L TE+ K + E I +K A L K
Sbjct: 440 EDKEKKISAAQTRLSELHDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLS 499
Query: 183 --LNIVN-LRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKA---- 235
L +VN LR E D+ + + +KE+ +++I I+ L+ + +H+ KA
Sbjct: 500 GRLQLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSKDPKHSHMKAQKSG 559
Query: 236 ------------------LSETLEEKNKNTENRKELKERI 257
L E L K TE K+L+E++
Sbjct: 560 KEQQLDIMNKQYQQLESRLDEILSRIAKETEEIKDLEEQL 599
Score = 39.3 bits (90), Expect = 0.010
Identities = 79/354 (22%), Positives = 145/354 (40%), Gaps = 33/354 (9%)
Query: 25 STKEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKDNCRNWKPTCD 84
S EE+ + + I E K + I + I +E + + + K +N
Sbjct: 1647 SLLEELSFQKGELNVQISERKTQLTLIKQEIEKEEENLQVVLRQMSKHKTELKNILDMLQ 1706
Query: 85 VFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYYEK-KR 143
+ ++ Q +EK + + + + + + Q + E + ++ E+ KR
Sbjct: 1707 LENHELQGLKLQHDQRVSELEKTQVAVLEEKLELENLQQISQQQKGEIEWQKQLLERDKR 1766
Query: 144 EHEEI--QSRVL-ACTEQL-KMNETIFMKFRVPAPFPSLTKWTLNIVNLRCETQDILKHA 199
E E + +SR L +C E L K E + K + + TK L + +
Sbjct: 1767 EIERMTAESRALQSCVECLSKEKEDLQEKCDIWEKKLAQTKRVLAAAEENSKMEQ----- 1821
Query: 200 SNLTKSSSELKKEVDEMEIEINYLNQ-QISRHNETKALSETLEEKNKNTENRKELKERIF 258
SNL K L+ V +++ E++ LN+ ++S HN+ A+ + L+EK E L+E +
Sbjct: 1822 SNLEK----LELNVRKLQQELDQLNRDKLSLHNDISAMQQQLQEKR---EAVNSLQEELA 1874
Query: 259 GKDEHV----LTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESSAKQSKLANI 314
+H+ L T Q L E +L + I ++ R D ++E KQ +L +
Sbjct: 1875 NVQDHLNLAKQDLLHTTKHQDVLLSEQTRLQKDISEWAN--RFEDCQKEEETKQQQLQVL 1932
Query: 315 DFRQKENDTQI------FNDSAVDNHSKCSHITTITSSQKFMQVRL---LTPQK 359
+EN ++ F + S+ S + T + K Q +L LT QK
Sbjct: 1933 QNEIEENKLKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQK 1986
Score = 38.5 bits (88), Expect = 0.017
Identities = 90/423 (21%), Positives = 159/423 (37%), Gaps = 79/423 (18%)
Query: 8 SLDRLLLEFVFQYEQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCK 67
+ +R LE V + E+D+ K MI+ E++K + EEI + K
Sbjct: 263 AFERFSLEEVERLERDLEKK--MIET-----EELKSKQTRFL----------EEIKNQDK 305
Query: 68 HSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDY-----ICQYK--- 119
++ +K+ K +C+ + D + Q T+E + Y + YK
Sbjct: 306 LNKSLKEEAMLQKQSCEELKS--DLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDA 363
Query: 120 --EVLKQYQLKYSE---TPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAP 174
E L Y +Y+E P Y K R R + TE ++ ++ + P
Sbjct: 364 KFEPLNYYPSEYAEIDKAPDESPYIGKSR-----YKRNMFATESYIIDSAQAVQIKKMEP 418
Query: 175 FPSLTKWTLNI---VNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHN 231
L +N+ L + +D K S SEL E+++ E QQI R
Sbjct: 419 DEQLRNDHMNLRGHTPLDTQLEDKEKKISAAQTRLSELHDEIEKAE-------QQILRAT 471
Query: 232 ET-KALSETLEEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKM 290
E K L E ++ K + + L +++ G+ + +NK + L L + +K
Sbjct: 472 EEFKQLEEAIQLKKISEAGKDLLYKQLSGR---LQLVNKLRQEALDLELQMEKQ------ 522
Query: 291 HSSEPRVADIKEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFM 350
K+E + KQ ++ D QI DS K SH+ S K
Sbjct: 523 ----------KQEIAGKQKEI---------KDLQIAIDSLDSKDPKHSHMKA-QKSGKEQ 562
Query: 351 QVRLLTPQKQSNSNQWSEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGKSIENDSDE 410
Q+ ++ Q Q ++ E + A+ ++ ++ + E Q E K +E
Sbjct: 563 QLDIMNKQYQQLESRLDEILSRIAKETEE--IKDLEEQLTEGQIAANEALKKDLEGVISG 620
Query: 411 VEE 413
++E
Sbjct: 621 LQE 623
Score = 34.3 bits (77), Expect = 0.33
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 26/157 (16%)
Query: 196 LKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALS-----ETLEEKN------ 244
L+ N K E + + +ME EI+YL + + E + L+ E EEK
Sbjct: 894 LEARMNFDKRQHEAR--IQQMENEIHYLQENLKSMEEIQGLTDLQLQEADEEKERILAQL 951
Query: 245 KNTENRKEL-----KERIFGKDEH-------VLTLNKTQSSQLFLPYESQKLVRPIKMHS 292
+ E +K+L +E++FG D+ V T +K +++L + + K + M
Sbjct: 952 RELEKKKKLEDAKSQEQVFGLDKELKKLKKAVATSDKLATAELTIAKDQLKSLHGTVMKI 1011
Query: 293 SEPRVADIKE-ESSAKQSKLANIDFRQKENDTQIFND 328
++ R +++E E ++++ A D + E + ++ +
Sbjct: 1012 NQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQN 1048
>gi|51972208 leucine, glutamate and lysine rich 1 [Homo sapiens]
Length = 388
Score = 45.4 bits (106), Expect = 1e-04
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 41/284 (14%)
Query: 27 KEEMIQRINKCCEDIKENKVTICRIHETINATDEE-----IDHYCKHSEEIKDNCR---- 77
+E++ +RIN +++ K + + E + E I H K E++++ R
Sbjct: 31 EEDIKRRINLAENELEITKTLLNQTREEVLTLKNERELMLISHQ-KSIEQLQETLRQKLL 89
Query: 78 ---NWKPTCDVF-----RKHEDYMQDQFTVYQGT----VEKDKEMYHDYICQYKEVLKQY 125
NWK + +H ++Q +++ ++ +KE + D I +YK+ ++
Sbjct: 90 SDDNWKEKIEAELAKERAQHLVEFEEQALLFKEETKLQLDIEKEKHQDVIQKYKKEQEEL 149
Query: 126 QLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNI 185
Q+K S+ +++ V E+L + T R S K N+
Sbjct: 150 QMKISDLITGAT--------RDLRQEVTTLKEKLHKSHT-----RYTEESNSKEKEIENL 196
Query: 186 VNLRCETQDILKHASNLTKSSSE-LKKEVDEMEIEINYL----NQQISRHNETKALSETL 240
NL E + LK + S SE L+KE+++ E+ + Q I + N+++ + L
Sbjct: 197 KNLVAEFESRLKKEIDSNDSVSENLRKEMEQKSDELKRVMLAQTQLIEQFNQSQEENTFL 256
Query: 241 EEK-NKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQK 283
+E + E R EL E + E +L L+K + S F P K
Sbjct: 257 QETVRRECEERFELTEALSQAREQLLELSKLRGSLPFSPCSLSK 300
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 45.1 bits (105), Expect = 2e-04
Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 55/256 (21%)
Query: 103 TVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYYEKK-----REHEEIQSRVLACTE 157
+ E +KEM KE ++ + + +++ R+ E+K +E ++Q +V A +E
Sbjct: 843 SAETEKEM-----ATMKEEFQKTKDELAKSEAKRKELEEKLVTLVQEKNDLQLQVQAESE 897
Query: 158 QL-----KMNETIFMKFRVPAPFPSLTKWTLNIVNLRCETQDILKHASNLTKSSSELKKE 212
L + ++ I KF++ A +T+ + + E + L SELKK+
Sbjct: 898 NLLDAEERCDQLIKAKFQLEAKIKEVTERAEDEEEINAE---LTAKKRKLEDECSELKKD 954
Query: 213 VDEMEIEINYL-NQQISRHNETKALSETL----EEKNKNTENRKELKER-------IFGK 260
+D++E+ + + ++ + N+ K L+E L E K T +K L+E + +
Sbjct: 955 IDDLELTLAKVEKEKHATENKVKNLTEELSGLDETIAKLTREKKALQEAHQQALDDLQAE 1014
Query: 261 DEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESSAKQSKLANIDF---- 316
++ V +LNKT+S E +V D+ ESS +Q K +D
Sbjct: 1015 EDKVNSLNKTKS-------------------KLEQQVEDL--ESSLEQEKKLRVDLERNK 1053
Query: 317 RQKENDTQIFNDSAVD 332
R+ E D ++ +S +D
Sbjct: 1054 RKLEGDLKLAQESILD 1069
Score = 37.7 bits (86), Expect = 0.030
Identities = 72/393 (18%), Positives = 151/393 (38%), Gaps = 63/393 (16%)
Query: 23 DISTKEEMIQRINKC-------CEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKDN 75
D+ +E+ + +NK ED++ + ++ + +++ K ++E +
Sbjct: 1010 DLQAEEDKVNSLNKTKSKLEQQVEDLESSLEQEKKLRVDLERNKRKLEGDLKLAQESILD 1069
Query: 76 CRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSE---- 131
N K D K +D+ ++ Q VE ++ + Q+++ +K+ Q + E
Sbjct: 1070 LENDKQQLDERLKKKDF---EYCQLQSKVEDEQTLG----LQFQKKIKELQARIEELEEE 1122
Query: 132 ---------------TPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFP 176
+ ++RE E EE E K E F+K R
Sbjct: 1123 IEAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDLEEA 1182
Query: 177 SLTKWTLNIVNLRCETQDIL----KHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNE 232
+L + + LR + D + + NL + +L+KE E ++EI+ L+ + ++
Sbjct: 1183 TLQHEAM-VAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEFKLEIDDLSSSMESVSK 1241
Query: 233 TKA----LSETLEE-----KNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQK 283
+KA + TLE+ + KN E ++ L E LT K++ L E+ +
Sbjct: 1242 SKANLEKICRTLEDQLSEARGKNEEIQRSLSE---------LTTQKSR-----LQTEAGE 1287
Query: 284 LVRPIKMHSSEPRVADIKEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTI 343
L R ++ S +++ +Q++ ++ + + C +
Sbjct: 1288 LSRQLEEKESIVSQLSRSKQAFTQQTEELKRQLEEENKAKNALAHALQSSRHDCDLLREQ 1347
Query: 344 TSSQKFMQVRLLTPQKQSNSN--QWSEKGDKDA 374
++ + L ++NS QW K + DA
Sbjct: 1348 YEEEQEGKAELQRALSKANSEVAQWRTKYETDA 1380
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 43.5 bits (101), Expect = 5e-04
Identities = 70/364 (19%), Positives = 152/364 (41%), Gaps = 49/364 (13%)
Query: 13 LLEFVFQYEQDISTKE--EMIQRINKCCEDIKENKVTIC--------RIHETINATDEEI 62
L E + +D K+ ++Q + + I E K + + + I EE
Sbjct: 763 LKEMGSEVSEDSEEKDVVNVLQAVGESLAKINEEKCNLAFQRDEKVLELEKEIKCLQEES 822
Query: 63 DHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVL 122
C EE+K R+++ + RK + +Q + Q + + K + + +L
Sbjct: 823 VVQC---EELKSLLRDYEQEKVLLRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLL 879
Query: 123 KQYQLKYSETPFSREYYEKK-----REHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPS 177
Q + + S+T E + +K +EHE ++ + + + E I +K + A PS
Sbjct: 880 IQVE-EVSQTCSKSEIHNEKEKCFIKEHENLKPLLEQKELRDRRAELILLKDSL-AKSPS 937
Query: 178 LTKWTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQI-SRHNETKAL 236
+ L+ V +++ + NL K E +++++++++ +++ S ET+ +
Sbjct: 938 VKNDPLSSV------KELEEKIENLEKECKEKEEKINKIKLVAVKAKKELDSSRKETQTV 991
Query: 237 SETLEE-KNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEP 295
E LE +++ + +++ I G + + L L YE Q ++
Sbjct: 992 KEELESLRSEKDQLSASMRDLIQGAESY---------KNLLLEYEKQSEQLDVE------ 1036
Query: 296 RVADIKEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLL 355
KE ++ + ++ ++ RQ N T DN + I T+ S+ K ++V++L
Sbjct: 1037 -----KERANNFEHRIEDLT-RQLRNSTLQCETINSDNEDLLARIETLQSNAKLLEVQIL 1090
Query: 356 TPQK 359
Q+
Sbjct: 1091 EVQR 1094
Score = 33.9 bits (76), Expect = 0.43
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 208 ELKKEVDEMEIEINYLNQQISRHNE-TKALSETLEEKNKNTENRKEL--KERIFGKDEHV 264
EL K+V++ I Y ++ + NE T L ETL+EK++N + ++L + ++ +D+ V
Sbjct: 626 ELGKKVEQT---IQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEV 682
Query: 265 LT--LNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESSAKQSKL 311
L+ + L E ++L R +++ S+ +KE + + KL
Sbjct: 683 LSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQKEDVILKEHITQLEKKL 731
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 43.5 bits (101), Expect = 5e-04
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 19/204 (9%)
Query: 128 KYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNIVN 187
K S R E K++HEE Q + E+L+ +T+ ++ ++ + KW +++
Sbjct: 284 KLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQ-KLLEREKDVRKWKEELLD 342
Query: 188 LRCET-QDILKHAS--------NLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSE 238
R ++ L HA + K + E + +V+E+ IN L Q RH+ L E
Sbjct: 343 QRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAF-INTLEAQNKRHDVLSKLKE 401
Query: 239 TLEEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPI--KMHSSEPR 296
+ N+ E R+ +E +DE V Q + L E Q V + K E R
Sbjct: 402 YEQRLNELQEERQRRQEEKQARDEAV------QERKRALEAERQARVEELLMKRKEQEAR 455
Query: 297 VADIKEESSAKQSKLANIDFRQKE 320
+ ++E + A R +E
Sbjct: 456 IEQQRQEKEKAREDAARERARDRE 479
Score = 32.3 bits (72), Expect = 1.2
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 119 KEVLKQYQLKYSET--PFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFP 176
+E+ K+ QLK+ E+ + ++K + E+ S A T+ P P
Sbjct: 494 EELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDY------------APKLTP 541
Query: 177 SLTKWTLNIVNLRCETQDIL-------KHASNLTKSSSELKKEVDEMEIEINYLNQQI-S 228
K ++ N+ ++ L KH + +++S +E+ + E+E L + I
Sbjct: 542 YERKKQCSLCNVLISSEVYLFSHVKGRKHQQAVRENTSIQGRELSDEEVEHLSLKKYIID 601
Query: 229 RHNETKALSETL---EEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLV 285
E+ A +E L EE+ KN + K++K R+ + + +L +T++S PY++ KL
Sbjct: 602 IVVESTAPAEALKDGEERQKNKKKAKKIKARMNFRAKEYESLMETKNSGSDSPYKA-KLQ 660
Query: 286 RPIKMHSSEPRVADIKEESSAKQSKL 311
R K + +V D ++ K S L
Sbjct: 661 RLAKDLLKQVQVQDSGSWANNKVSAL 686
>gi|225579092 S-phase cyclin A-associated protein in the ER isoform
a [Homo sapiens]
Length = 1400
Score = 43.5 bits (101), Expect = 5e-04
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 19/204 (9%)
Query: 128 KYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNIVN 187
K S R E K++HEE Q + E+L+ +T+ ++ ++ + KW +++
Sbjct: 530 KLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQ-KLLEREKDVRKWKEELLD 588
Query: 188 LRCET-QDILKHAS--------NLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSE 238
R ++ L HA + K + E + +V+E+ IN L Q RH+ L E
Sbjct: 589 QRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAF-INTLEAQNKRHDVLSKLKE 647
Query: 239 TLEEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPI--KMHSSEPR 296
+ N+ E R+ +E +DE V Q + L E Q V + K E R
Sbjct: 648 YEQRLNELQEERQRRQEEKQARDEAV------QERKRALEAERQARVEELLMKRKEQEAR 701
Query: 297 VADIKEESSAKQSKLANIDFRQKE 320
+ ++E + A R +E
Sbjct: 702 IEQQRQEKEKAREDAARERARDRE 725
Score = 32.3 bits (72), Expect = 1.2
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 119 KEVLKQYQLKYSET--PFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFP 176
+E+ K+ QLK+ E+ + ++K + E+ S A T+ P P
Sbjct: 740 EELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDY------------APKLTP 787
Query: 177 SLTKWTLNIVNLRCETQDIL-------KHASNLTKSSSELKKEVDEMEIEINYLNQQI-S 228
K ++ N+ ++ L KH + +++S +E+ + E+E L + I
Sbjct: 788 YERKKQCSLCNVLISSEVYLFSHVKGRKHQQAVRENTSIQGRELSDEEVEHLSLKKYIID 847
Query: 229 RHNETKALSETL---EEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLV 285
E+ A +E L EE+ KN + K++K R+ + + +L +T++S PY++ KL
Sbjct: 848 IVVESTAPAEALKDGEERQKNKKKAKKIKARMNFRAKEYESLMETKNSGSDSPYKA-KLQ 906
Query: 286 RPIKMHSSEPRVADIKEESSAKQSKL 311
R K + +V D ++ K S L
Sbjct: 907 RLAKDLLKQVQVQDSGSWANNKVSAL 932
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 42.7 bits (99), Expect = 0.001
Identities = 51/256 (19%), Positives = 100/256 (39%), Gaps = 24/256 (9%)
Query: 10 DRLLLEFVFQYEQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHS 69
+++L E + + +S E ++I K E KE E + E+ H K +
Sbjct: 589 NKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKG-------ERAEELENELHHLEKEN 641
Query: 70 EEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQ-LK 128
E ++ N K TC+ E + +E++ + +K + Q + L+
Sbjct: 642 ELLQKKITNLKITCEKIEALEQENSE--------LERENRKLKKTLDSFKNLTFQLESLE 693
Query: 129 YSETPFSREYYEKKREHEEIQSRVLACTE-QLKMNETIFMKFRVP-------APFPSLTK 180
+ E E +R E ++ + + QL+ E K ++ A F +
Sbjct: 694 KENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESEKEQLKKGLELLKASFKKTER 753
Query: 181 WTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETL 240
++ L E Q + K N K +L+ E+ ++E+E L + + + E L
Sbjct: 754 LEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQL 813
Query: 241 EEKNKNTENRKELKER 256
E++NK+ E E+
Sbjct: 814 EKENKSLEQETSQLEK 829
Score = 40.4 bits (93), Expect = 0.005
Identities = 53/308 (17%), Positives = 125/308 (40%), Gaps = 19/308 (6%)
Query: 21 EQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDE-EIDHYCKHSEEIKDNCRNW 79
E +I +++ +Q +D+ + K + + ET+ E +I + +E + +
Sbjct: 511 ENEIVQEKQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSL 570
Query: 80 KPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYY 139
+ + E ++D +EK+ ++ H+ I + L + + + + E+Y
Sbjct: 571 RQRSQI--SAEARVKD--------IEKENKILHESIKETSSKLSKIEFEKRQIKKELEHY 620
Query: 140 EKKREH-EEIQSRVLACTEQLKMNETIFMKFRVPA-PFPSLTKWTLNIVNLRCETQDILK 197
++K E EE+++ + ++ ++ + ++ +L + + + + L
Sbjct: 621 KEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLD 680
Query: 198 HASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTENRKE-LKER 256
NLT L+KE +++ E L + + L+ +NK E+ KE LK+
Sbjct: 681 SFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESEKEQLKKG 740
Query: 257 IFGKDEHVLTLNKTQSSQLFLPYESQKLVRPI-----KMHSSEPRVADIKEESSAKQSKL 311
+ + + S L E+Q+L + + K+ E + D++ E+ Q L
Sbjct: 741 LELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQTLQKNL 800
Query: 312 ANIDFRQK 319
+ K
Sbjct: 801 EELKISSK 808
Score = 33.1 bits (74), Expect = 0.73
Identities = 48/285 (16%), Positives = 119/285 (41%), Gaps = 41/285 (14%)
Query: 21 EQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKDNCRNWK 80
E+ I+ E ++ + +++ T+ + +E + +E + + S I W+
Sbjct: 973 EEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDE-ERMVQSSPPISGEDNKWE 1031
Query: 81 PTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYYE 140
R+ ++ ++ V +E ++ + + K+ LK QLK ET
Sbjct: 1032 ------RESQETTRELLKVKDRLIEVERN--NATLQAEKQALKT-QLKQLET-------- 1074
Query: 141 KKREHEEIQSRVLACTEQL----KMNETI-FMKFRVPAPFPSLTKWTLNIVN-------- 187
++ +Q+++LA Q + N T+ ++ +L + +++N
Sbjct: 1075 ---QNNNLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQ 1131
Query: 188 ---LRCETQDILKHASNLTKSSSELKKEVDEMEI----EINYLNQQISRHNETKALSETL 240
L E + ++K +L L K+ +++E+ + + IS+H K+ + L
Sbjct: 1132 QSSLENENESVIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLISKHGTLKSAHKNL 1191
Query: 241 EEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLV 285
E ++++ E+R + G+ E + + K + ++ L ++ + V
Sbjct: 1192 EVEHRDLEDRYNQLLKQKGQLEDLEKMLKVEQEKMLLENKNHETV 1236
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 42.7 bits (99), Expect = 0.001
Identities = 51/256 (19%), Positives = 100/256 (39%), Gaps = 24/256 (9%)
Query: 10 DRLLLEFVFQYEQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHS 69
+++L E + + +S E ++I K E KE E + E+ H K +
Sbjct: 589 NKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKG-------ERAEELENELHHLEKEN 641
Query: 70 EEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQ-LK 128
E ++ N K TC+ E + +E++ + +K + Q + L+
Sbjct: 642 ELLQKKITNLKITCEKIEALEQENSE--------LERENRKLKKTLDSFKNLTFQLESLE 693
Query: 129 YSETPFSREYYEKKREHEEIQSRVLACTE-QLKMNETIFMKFRVP-------APFPSLTK 180
+ E E +R E ++ + + QL+ E K ++ A F +
Sbjct: 694 KENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESEKEQLKKGLELLKASFKKTER 753
Query: 181 WTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETL 240
++ L E Q + K N K +L+ E+ ++E+E L + + + E L
Sbjct: 754 LEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQL 813
Query: 241 EEKNKNTENRKELKER 256
E++NK+ E E+
Sbjct: 814 EKENKSLEQETSQLEK 829
Score = 40.4 bits (93), Expect = 0.005
Identities = 53/308 (17%), Positives = 125/308 (40%), Gaps = 19/308 (6%)
Query: 21 EQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDE-EIDHYCKHSEEIKDNCRNW 79
E +I +++ +Q +D+ + K + + ET+ E +I + +E + +
Sbjct: 511 ENEIVQEKQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSL 570
Query: 80 KPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYY 139
+ + E ++D +EK+ ++ H+ I + L + + + + E+Y
Sbjct: 571 RQRSQI--SAEARVKD--------IEKENKILHESIKETSSKLSKIEFEKRQIKKELEHY 620
Query: 140 EKKREH-EEIQSRVLACTEQLKMNETIFMKFRVPA-PFPSLTKWTLNIVNLRCETQDILK 197
++K E EE+++ + ++ ++ + ++ +L + + + + L
Sbjct: 621 KEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLD 680
Query: 198 HASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTENRKE-LKER 256
NLT L+KE +++ E L + + L+ +NK E+ KE LK+
Sbjct: 681 SFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESEKEQLKKG 740
Query: 257 IFGKDEHVLTLNKTQSSQLFLPYESQKLVRPI-----KMHSSEPRVADIKEESSAKQSKL 311
+ + + S L E+Q+L + + K+ E + D++ E+ Q L
Sbjct: 741 LELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQTLQKNL 800
Query: 312 ANIDFRQK 319
+ K
Sbjct: 801 EELKISSK 808
Score = 33.1 bits (74), Expect = 0.73
Identities = 48/285 (16%), Positives = 119/285 (41%), Gaps = 41/285 (14%)
Query: 21 EQDISTKEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKDNCRNWK 80
E+ I+ E ++ + +++ T+ + +E + +E + + S I W+
Sbjct: 972 EEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDE-ERMVQSSPPISGEDNKWE 1030
Query: 81 PTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYYE 140
R+ ++ ++ V +E ++ + + K+ LK QLK ET
Sbjct: 1031 ------RESQETTRELLKVKDRLIEVERN--NATLQAEKQALKT-QLKQLET-------- 1073
Query: 141 KKREHEEIQSRVLACTEQL----KMNETI-FMKFRVPAPFPSLTKWTLNIVN-------- 187
++ +Q+++LA Q + N T+ ++ +L + +++N
Sbjct: 1074 ---QNNNLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQ 1130
Query: 188 ---LRCETQDILKHASNLTKSSSELKKEVDEMEI----EINYLNQQISRHNETKALSETL 240
L E + ++K +L L K+ +++E+ + + IS+H K+ + L
Sbjct: 1131 QSSLENENESVIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLISKHGTLKSAHKNL 1190
Query: 241 EEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLV 285
E ++++ E+R + G+ E + + K + ++ L ++ + V
Sbjct: 1191 EVEHRDLEDRYNQLLKQKGQLEDLEKMLKVEQEKMLLENKNHETV 1235
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/281 (18%), Positives = 132/281 (46%), Gaps = 20/281 (7%)
Query: 55 INATDEEIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDY 114
++ T E+ D + E ++ N + C+ K + ++ + VE+++E+ +
Sbjct: 890 VSLTQEKNDLILQLQAE-QETLANVEEQCEWLIKSKIQLEARVKELSERVEEEEEINSEL 948
Query: 115 ICQYKEVLKQ-YQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLK-MNETIFMKFRVP 172
+ +++ + ++LK + ++E + +V TE+++ +NE I R
Sbjct: 949 TARGRKLEDECFELKKEIDDLETMLVKSEKEKRTTEHKVKNLTEEVEFLNEDISKLNRAA 1008
Query: 173 APFPSLTKWTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQ-QISRHN 231
+ TL+ +++ E S+L+K++ +L+++VDE+E + + +++
Sbjct: 1009 KVVQEAHQQTLDDLHMEEEK------LSSLSKANLKLEQQVDELEGALEQERKARMNCER 1062
Query: 232 ETKALSETLEEKNKNTEN----RKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRP 287
E L L+ ++ EN ++ L E + K+ + +N ++ L + QK V+
Sbjct: 1063 ELHKLEGNLKLNRESMENLESSQRHLAEELRKKELELSQMNSKVENEKGLVAQLQKTVKE 1122
Query: 288 IKMHSSEPRVADIKEESSAKQSKLANIDFRQKENDTQIFND 328
+ + ++ D+KE+ A+++ A ++ R++ + TQ D
Sbjct: 1123 L-----QTQIKDLKEKLEAERTTRAKME-RERADLTQDLAD 1157
Score = 37.4 bits (85), Expect = 0.039
Identities = 63/352 (17%), Positives = 139/352 (39%), Gaps = 43/352 (12%)
Query: 142 KREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNIVNLRCETQDILKHASN 201
K++HEE Q+ + A ++++ T +K + + + + LR E +++ + SN
Sbjct: 1469 KQKHEESQALLDASQKEVQALSTELLKLK-----NTYEESIVGQETLRRENKNLQEEISN 1523
Query: 202 LTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKN---------TENRKE 252
LT E K + EME + ++ + T +E E+N++ E + E
Sbjct: 1524 LTNQVREGTKNLTEMEKVKKLIEEEKTEVQVTLEETEGALERNESKILHFQLELLEAKAE 1583
Query: 253 LKERIFGKDEHVLTLNKTQ-----SSQLFLPYESQKLVRPIK--------MHSSEPRVAD 299
L+ ++ KDE + + Q S Q L E++ + + ++ E +++
Sbjct: 1584 LERKLSEKDEEIENFRRKQQCTIDSLQSSLDSEAKSRIEVTRLKKKMEEDLNEMELQLSC 1643
Query: 300 IKEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLTPQK 359
+ S L + + K+ Q+ +DS N + +Q L +
Sbjct: 1644 ANRQVSEATKSLGQLQIQIKDLQMQL-DDSTQLNSDLKEQVAVAERRNSLLQSEL---ED 1699
Query: 360 QSNSNQWSEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFG-----KSIENDSDEVEER 414
+ + +E+G + +E ++ E+ YT++ K +E D +++
Sbjct: 1700 LRSLQEQTERGRRLSE-------EELLEATERINLFYTQNTSLLSQKKKLEADVARMQKE 1752
Query: 415 AENFPRTSEIPIFLGTPKAVKAPESLEKIKFPKTPPFEINRNRNAVPEVQTE 466
AE + + A++A E++K + + R R + + T+
Sbjct: 1753 AEEVVQECQNAEEKAKKAAIEAANLSEELKKKQDTIAHLERTRENMEQTITD 1804
>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
Length = 1219
Score = 42.4 bits (98), Expect = 0.001
Identities = 93/450 (20%), Positives = 184/450 (40%), Gaps = 56/450 (12%)
Query: 31 IQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKDNCRNWKPTCDVFRKHE 90
IQRI I+EN+ I E N +E+ D K SE I+ N R + + + K
Sbjct: 567 IQRI------IQENERLKQEILEKSNRIEEQND---KISELIERNQRYVEQSNLMMEKRN 617
Query: 91 DYMQDQFTVYQGTV---EKDKEMYHDYICQYKEVLKQYQLKYS-----ETPFSREYYEKK 142
+ +Q Q V E++K + + + QLK + ET + E
Sbjct: 618 NSLQTATENTQARVLHAEQEKAKVTEELAAATAQVSHLQLKMTAHQKKETELQMQLTESL 677
Query: 143 REHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPS----LTKWTLNIVNLRCETQDILKH 198
+E + ++ ++ Q K++E + + F S + L + +L E D+
Sbjct: 678 KETDLLRGQLTKV--QAKLSELQETSEQAQSKFKSEKQNRKQLELKVTSLEEELTDLRVE 735
Query: 199 ASNLTKSSSELKK----EVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTEN----- 249
+L K+ SE KK E + E EI+ + + S E L + L++ +T+
Sbjct: 736 KESLEKNLSERKKKSAQERSQAEEEIDEIRK--SYQEELDKLRQLLKKTRVSTDQAAAEQ 793
Query: 250 ----RKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESS 305
+ EL+ + K EH+L K + Q + +Q+ + + ++ ++E+
Sbjct: 794 LSLVQAELQTQWEAKCEHLLASAKDEHLQQYQEVCAQR-------DAYQQKLVQLQEKCL 846
Query: 306 AKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLTPQKQSNSNQ 365
A Q+++ + K+N+ I N S+ S + S +++ QS +
Sbjct: 847 ALQAQITALT---KQNEQHI--KELEKNKSQMSGVEAAASDPSEKVKKIMNQVFQSLRRE 901
Query: 366 WSEKGDKDAEYGDKGTVRQVRES-KCTSQAIYTEHFGKSIENDSDEVEERAENFP-RTSE 423
+ + + Y + + + + K + + + + E+ S+E EE+AE P R S+
Sbjct: 902 F----ELEESYNGRTILGTIMNTIKMVTLQLLNQQEQEKEESSSEEEEEKAEERPRRPSQ 957
Query: 424 IPIFLGTPKAVKAPESLEKIKFPKTPPFEI 453
+ +AP + E+ + P P ++
Sbjct: 958 EQSASASSGQPQAPLNRERPESPMVPSEQV 987
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 42.0 bits (97), Expect = 0.002
Identities = 54/279 (19%), Positives = 110/279 (39%), Gaps = 49/279 (17%)
Query: 21 EQDISTKEEMIQRINKCCEDIKENK------------------VTICRIHETINATDEEI 62
EQD + KE+ +Q K +DI++ K CR + I +EE+
Sbjct: 1088 EQDSAKKEQQLQERCKALQDIQKEKSLKEKELVNEKSKLAEIEEIKCRQEKEITKLNEEL 1147
Query: 63 DHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVL 122
H E N K + + + +Q + + VE++K + +++L
Sbjct: 1148 K---SHKLESIKEITNLKDAKQLLIQQKLELQGKADSLKAAVEQEK--------RNQQIL 1196
Query: 123 KQYQLKYSETPFSREYYEKKRE-HEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKW 181
K Q+K E +E+ EK+ + H EI+ + + + + + M+ +T
Sbjct: 1197 KD-QVKKEEEELKKEFIEKEAKLHSEIKEKEVGMKKHEENEAKLTMQ---------ITAL 1246
Query: 182 TLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEIN--------YLNQQISRHNET 233
N+ ++ E Q + S L K + +L+ E+ +E + L + + E
Sbjct: 1247 NENLGTVKKEWQSSQRRVSELEKQTDDLRGEIAVLEATVQNNQDERRALLERCLKGEGEI 1306
Query: 234 KALSETLEEKNKNTENRKELKERIFGKDEHVLTLNKTQS 272
+ L + E + +N + + G++ L + TQ+
Sbjct: 1307 EKLQTKVLELQRKLDNTTAAVQEL-GRENQSLQIKHTQA 1344
Score = 30.4 bits (67), Expect = 4.7
Identities = 47/271 (17%), Positives = 103/271 (38%), Gaps = 36/271 (13%)
Query: 119 KEVLKQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSL 178
KE L + + KY + +++RE +E L ++ + + ++ L
Sbjct: 378 KEELSEVETKYQHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKLLETERQLGEAHGRL 437
Query: 179 TKWT-LNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALS 237
+ L+ L + Q + L++ +LK++V + L++ +H E +AL
Sbjct: 438 KEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQHQEQQALQ 497
Query: 238 ETLEEKNKNTENRKELKERIFG-KDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPR 296
++ K + +N E R G KD+ + L + S+
Sbjct: 498 QSTTAKLREAQNDLEQVLRQIGDKDQKIQNLEAL-------------------LQKSKEN 538
Query: 297 VADIKEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLT 356
++ +++E +K+ + E +T + N NH+ +T +T K
Sbjct: 539 ISLLEKEREDLYAKI-----QAGEGETAVLNQLQEKNHTLQEQVTQLTEKLK-------- 585
Query: 357 PQKQSNSNQWSEKGDKDAEYGDKGTVRQVRE 387
QS S++ +++ D K +R ++
Sbjct: 586 --NQSESHKQAQENLHDQVQEQKAHLRAAQD 614
Score = 29.6 bits (65), Expect = 8.1
Identities = 30/139 (21%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 184 NIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHN--------ETKA 235
++ LR E QD+ S ELKKE+++ + L QQ ++ + E ++
Sbjct: 84 DVTLLRQEVQDLQASLKEEKWYSEELKKELEKYQ----GLQQQEAKPDGLVTDSSAELQS 139
Query: 236 LSETLEEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEP 295
L + LEE N K++K+ K + T+ + + Y+ ++ +R ++E
Sbjct: 140 LEQQLEEAQTENFNIKQMKDLFEQKAAQL----ATEIADIKSKYDEERSLR----EAAEQ 191
Query: 296 RVADIKEESSAKQSKLANI 314
+V + EE + + + + ++
Sbjct: 192 KVTRLTEELNKEATVIQDL 210
>gi|64085252 hypothetical protein LOC145508 [Homo sapiens]
Length = 1094
Score = 42.0 bits (97), Expect = 0.002
Identities = 110/559 (19%), Positives = 209/559 (37%), Gaps = 103/559 (18%)
Query: 23 DISTKEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKDNCR---NW 79
+ S ++ + +C E + K + E + E+++ K ++ D + N
Sbjct: 373 NFSAMASELEEVKRCMERKDKEKAHLASQVENLT---RELENGEKQQLQMLDRLKEIQNH 429
Query: 80 KPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYY 139
TC+ RKH D + T + K E Y + Q E LK E
Sbjct: 430 FDTCEAERKHADLQISELTRHAEDATKQAERYLSEL-QQSEALK-------------EEA 475
Query: 140 EKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNIVNLRCETQDILKHA 199
EK+RE +++++ S+ +W L L + +
Sbjct: 476 EKRREDLKLKAQ------------------------ESIRQWKLKHKKLERALEKQSETV 511
Query: 200 SNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTE--NRKELKERI 257
LT ++++ KE DE++ ++ QQI N K L++ L ++ E + KE K R
Sbjct: 512 DELTGKNNQILKEKDELKTQLYAALQQI--ENLRKELNDVLTKRALQEEELHSKEEKLRD 569
Query: 258 FGKDEHVLTLNKTQSSQLFLPYESQ-----KLVRPIKMHSS--EPRVADIKEESSAKQSK 310
+ L L S ES+ K+ +K+ + E +A++K+ + ++K
Sbjct: 570 IKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAK 629
Query: 311 LANIDFRQKEND---TQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLTPQKQSNSNQWS 367
L + K+ + N A + +K + + ++ LT Q +S + +
Sbjct: 630 LLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSD---------LTAQAKSRDEETA 680
Query: 368 E-----KGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGKSIENDSDEVEERAENFPR-T 421
K ++D R++++ + Q++ T+H ++E ++F +
Sbjct: 681 TIITQLKLERDVHQ------RELKDLTSSLQSVKTKH--------EQNIQELMKHFKKEK 726
Query: 422 SEIPIFLGTPKAVKAPESLEKIKFPKTPPFEINRNR---NAVPEVQTEKESPGLSFLMSY 478
SE + T KA ESLE+ K ++ + + + + E T+ E+ + Y
Sbjct: 727 SEAENHIRTLKA----ESLEEKNMAKIHRGQLEKLKSQCDRLTEELTQNENENKKLKLKY 782
Query: 479 TSRSPGLNLFDSSVFDTEISSDQFNEHYSAR-----NLNPLSSEQE-IGNLLEKPEGEDG 532
L + + I + AR L L +EQE I ++ K
Sbjct: 783 QCLKDQLEEREKHI---SIEEEHLRRMEEARLQLKDQLLCLETEQESILGVIGKEIDAAC 839
Query: 533 FTFSFPSDTSTHTFGAGKD 551
TFS S F +G D
Sbjct: 840 KTFSKDSVEKLKVFSSGPD 858
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 41.6 bits (96), Expect = 0.002
Identities = 69/311 (22%), Positives = 138/311 (44%), Gaps = 42/311 (13%)
Query: 75 NCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPF 134
N ++W P ++F K + ++ + E +KEM KE ++ + + + +
Sbjct: 827 NVKHW-PWMNLFFKIKPLLK--------SAEAEKEM-----ATMKEDFERTKEELARSEA 872
Query: 135 SREYYEKK-----REHEEIQSRVLACTEQLKMNET-----IFMKFRVPAPFPSLTKWTLN 184
R+ E+K +E ++Q +V + TE L E I K + A LT+
Sbjct: 873 RRKELEEKMVSLLQEKNDLQLQVQSETENLMDAEERCEGLIKSKILLEAKVKELTERLEE 932
Query: 185 IVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYL-NQQISRHNETKALSETLEEK 243
+ E ++ NL S LK+++D++E+ + + ++ + N+ K LSE +
Sbjct: 933 EEEMNSE---LVAKKRNLEDKCSSLKRDIDDLELTLTKVEKEKHATENKVKNLSEEMTAL 989
Query: 244 NKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEE 303
+N K KE+ ++ H TL+ Q E K+ IK+++ + D E
Sbjct: 990 EENIS--KLTKEKKSLQEAHQQTLDDLQ-------VEEDKVNGLIKINAKLEQQTDDLEG 1040
Query: 304 SSAKQSKL-ANID--FRQKENDTQIFNDSAVDNHSKCSHITTITSSQKF--MQVRLLTPQ 358
S ++ KL A+++ R+ E D ++ +S +D + I ++F Q++
Sbjct: 1041 SLEQEKKLRADLERAKRKLEGDLKMSQESIMDLENDKQQIEEKLKKKEFELSQLQAKIDD 1100
Query: 359 KQSNSNQWSEK 369
+Q +S Q+ +K
Sbjct: 1101 EQVHSLQFQKK 1111
Score = 40.0 bits (92), Expect = 0.006
Identities = 67/319 (21%), Positives = 125/319 (39%), Gaps = 51/319 (15%)
Query: 90 EDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSE------------TPFSRE 137
E + +F + Q + D E H Q+++ +K+ Q + E ++
Sbjct: 1082 EKLKKKEFELSQLQAKIDDEQVHSL--QFQKKIKELQARIEELEEEIEAEHTLRAKIEKQ 1139
Query: 138 YYEKKREHEEIQSRVL----ACTEQLKMN---ETIFMKFRVPAPFPSL----TKWTL--- 183
+ RE EEI R+ A + Q++MN E F K R +L T TL
Sbjct: 1140 RSDLARELEEISERLEEASGATSAQIEMNKKREAEFQKMRRDLEEATLQHEATAATLRKK 1199
Query: 184 ---NIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETL 240
++ L + ++ + L K SELK E+D+M I L++ S T T+
Sbjct: 1200 QADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDMASNIEALSKSKSNIERT---CRTV 1256
Query: 241 EEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADI 300
E++ + + E + ++ H L + K + ++Q ++ E ++ +
Sbjct: 1257 EDQFSEIKAKDEQQTQLI----HDLNMQKAR-------LQTQNGELSHRVEEKESLISQL 1305
Query: 301 KEESSAKQSKLANIDFRQKENDTQIFNDSA---VDNHSKCSHITTITSSQKFMQVRLLTP 357
+ A +L + RQ E +T+ N A + C + ++ + L
Sbjct: 1306 TKSKQALTQQLEELK-RQMEEETKAKNAMAHALQSSRHDCDLLREQYEEEQEAKAELQRA 1364
Query: 358 QKQSNSN--QWSEKGDKDA 374
++NS QW K + DA
Sbjct: 1365 LSKANSEVAQWRTKYETDA 1383
>gi|14165274 golgi-associated microtubule-binding protein HOOK3
[Homo sapiens]
Length = 718
Score = 41.6 bits (96), Expect = 0.002
Identities = 103/511 (20%), Positives = 200/511 (39%), Gaps = 89/511 (17%)
Query: 2 NDSLFVSLDRLLLEFVFQYEQDISTKEEMIQRINKCCEDI-----------KENKVTICR 50
ND+ +V LDR L + + + +S KEE+ QR ++ + EN+V + R
Sbjct: 168 NDA-YVDLDRQLKKTTEELNEALSAKEEIAQRCHELDMQVAALQEEKSSLLAENQVLMER 226
Query: 51 IHETINATD----------------EEIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQ 94
++++ + D E++ E KD +++ C+ K ++
Sbjct: 227 LNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKD---DYRIRCEELEKEISELR 283
Query: 95 DQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYYEKKRE---HEEIQSR 151
Q T+ + + D I +VL+ K S+ E Y+KK E Q +
Sbjct: 284 QQNDELT-TLADEAQSLKDEI----DVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVK 338
Query: 152 VLACTEQLKMNETIFMK---FRVPAPFPSLTKWTLNIVNLRCETQDILKHASNLTKSSSE 208
+L + M T+ ++ + A L + +V L+ + K A L
Sbjct: 339 LLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKR 398
Query: 209 LKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTENRKELKERIFGKDEHVLTLN 268
LK++VD ++ E + L E +L ET+EE +L + ++ L
Sbjct: 399 LKEKVDSLQKEKDRL------RTERDSLKETIEELRCVQAQEGQL------TTQGLMPLG 446
Query: 269 KTQSS-----QLFLPYESQKLVR---PIKMHSSEPRVADIKEESSAKQSKLANIDFRQKE 320
+SS ++ P +KL+R KM +D E+ + QS L + + R+ E
Sbjct: 447 SQESSDSLAAEIVTPEIREKLIRLQHENKMLKLNQEGSD-NEKIALLQSLLDDANLRKNE 505
Query: 321 NDTQ--IFNDSAVDNHSKCSHITTITSSQ--KFMQVRLLTPQKQSNSNQWSEKGDKDAEY 376
+T+ + N ++ S+ + Q K LL + + + + E + E
Sbjct: 506 LETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDSVLLKKKLEEHLEKLHEANN---EL 562
Query: 377 GDKGTVRQVRESKCTSQAIYTEHFGKSIENDSDEVEERAENFPRTSEIPIFLGTPKAVKA 436
K + + E + + ++ E +++ +E+++ E + + E KA
Sbjct: 563 QKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLE--------KAKSV 614
Query: 437 PESLEKIKFPKTPPFEINRNRNAVPEVQTEK 467
+L+ PK +N+ A PE+Q K
Sbjct: 615 IRTLD----PK-------QNQGAAPEIQALK 634
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 41.6 bits (96), Expect = 0.002
Identities = 61/308 (19%), Positives = 127/308 (41%), Gaps = 55/308 (17%)
Query: 59 DEEIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDY--------MQDQFTVYQGTVEKDKEM 110
++++ HY K +E +C+ + ++E + ++++ QG KE
Sbjct: 636 EDKVRHYEKQLDETVVSCKKAQENMKQRHENETHTLEKQISDLKNEIAELQGQAAVLKEA 695
Query: 111 YHDYICQYKEVLKQYQLKYSETPFSREYYEKKREHEEIQSRVLAC-----TEQLKMNETI 165
+H+ C+++E KQ Q+K E + + + E+++R+ E+ + +
Sbjct: 696 HHEATCRHEEEKKQLQVKLEEEKTHLQEKLRLQHEMELKARLTQAQASFEREREGLQSSA 755
Query: 166 FMKFRVPAPFPSLTKW-----TLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEI 220
+ + +V L ++ T + E +++ K L K EL++ ++ME E
Sbjct: 756 WTEEKVRGLTQELEQFHQEQLTSLVEKHTLEKEELRKEL--LEKHQRELQEGREKMETEC 813
Query: 221 NYLNQQISR--HNETKALSETLEEKNKNTENR-----KELKER--------IFGKDEHVL 265
N QI ++ + ++E E ++ E R K+L+E+ F KDE
Sbjct: 814 NRRTSQIEAQFQSDCQKVTERCESALQSLEGRYRQELKDLQEQQREEKSQWEFEKDELTQ 873
Query: 266 -----------TLNKTQSSQLFLPYESQKLVRPIKMHSSEPRV---------ADIKEESS 305
TL + +++ L L E + L + K H + V D++ S
Sbjct: 874 ECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEHLNSMVVERQQLLQDLEDLRNVSE 933
Query: 306 AKQSKLAN 313
+QS L++
Sbjct: 934 TQQSLLSD 941
Score = 36.6 bits (83), Expect = 0.066
Identities = 66/320 (20%), Positives = 118/320 (36%), Gaps = 68/320 (21%)
Query: 67 KHSEEIKDNCRNWKPTCDVFRKHEDYMQDQF----TVYQGTVEKDKEMYHDYICQYKEVL 122
K E I + +K + + D +Q++ T Y +E +KE+ + E+
Sbjct: 1242 KMLERIPEASPKYKLLYEDVSRENDCLQEELRMMETRYDEALENNKELTAEVFRLQDELK 1301
Query: 123 KQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQL-KMNETIFMKFRVPAPFPSLTKW 181
K ++ + + Y E K E+EE+ VL ++ K+ E++ + SL
Sbjct: 1302 KMEEVTETFLSLEKSYDEVKIENEELNVLVLRLQGKIEKLQESVVQRCDCCLWEASLENL 1361
Query: 182 TL----NIVNLRCETQDILKHASNLTKSSSELKKEVDEME-----------IEINYLNQQ 226
+ NI+ L ++ + ++ E K+E +E EI +L+
Sbjct: 1362 EIEPDGNILQLNQTLEECVPRVRSVHHVIEECKQENQYLEGNTQLLEKVKAHEIAWLHGT 1421
Query: 227 ISRHNE--------------------------TKALSETLEEKNKNTENRKELKERI--- 257
I H E ++E EK K E ++LKER+
Sbjct: 1422 IQTHQERPRVQNQVILEENTTLLGFQDKHFQHQATIAELELEKTKLQELTRKLKERVTIL 1481
Query: 258 --------FGKDEHVL---------TLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADI 300
G+ E L T ++ Q L YES+KL + + +E + +
Sbjct: 1482 VKQKDVLSHGEKEEELKAMMHDLQITCSEMQQKVELLRYESEKLQQENSILRNE--ITTL 1539
Query: 301 KEESSAKQSKLANIDFRQKE 320
EE S KL ++ Q+E
Sbjct: 1540 NEEDSISNLKLGTLNGSQEE 1559
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 41.6 bits (96), Expect = 0.002
Identities = 61/308 (19%), Positives = 127/308 (41%), Gaps = 55/308 (17%)
Query: 59 DEEIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDY--------MQDQFTVYQGTVEKDKEM 110
++++ HY K +E +C+ + ++E + ++++ QG KE
Sbjct: 630 EDKVRHYEKQLDETVVSCKKAQENMKQRHENETHTLEKQISDLKNEIAELQGQAAVLKEA 689
Query: 111 YHDYICQYKEVLKQYQLKYSETPFSREYYEKKREHEEIQSRVLAC-----TEQLKMNETI 165
+H+ C+++E KQ Q+K E + + + E+++R+ E+ + +
Sbjct: 690 HHEATCRHEEEKKQLQVKLEEEKTHLQEKLRLQHEMELKARLTQAQASFEREREGLQSSA 749
Query: 166 FMKFRVPAPFPSLTKW-----TLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEI 220
+ + +V L ++ T + E +++ K L K EL++ ++ME E
Sbjct: 750 WTEEKVRGLTQELEQFHQEQLTSLVEKHTLEKEELRKEL--LEKHQRELQEGREKMETEC 807
Query: 221 NYLNQQISR--HNETKALSETLEEKNKNTENR-----KELKER--------IFGKDEHVL 265
N QI ++ + ++E E ++ E R K+L+E+ F KDE
Sbjct: 808 NRRTSQIEAQFQSDCQKVTERCESALQSLEGRYRQELKDLQEQQREEKSQWEFEKDELTQ 867
Query: 266 -----------TLNKTQSSQLFLPYESQKLVRPIKMHSSEPRV---------ADIKEESS 305
TL + +++ L L E + L + K H + V D++ S
Sbjct: 868 ECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEHLNSMVVERQQLLQDLEDLRNVSE 927
Query: 306 AKQSKLAN 313
+QS L++
Sbjct: 928 TQQSLLSD 935
Score = 36.6 bits (83), Expect = 0.066
Identities = 66/320 (20%), Positives = 118/320 (36%), Gaps = 68/320 (21%)
Query: 67 KHSEEIKDNCRNWKPTCDVFRKHEDYMQDQF----TVYQGTVEKDKEMYHDYICQYKEVL 122
K E I + +K + + D +Q++ T Y +E +KE+ + E+
Sbjct: 1236 KMLERIPEASPKYKLLYEDVSRENDCLQEELRMMETRYDEALENNKELTAEVFRLQDELK 1295
Query: 123 KQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQL-KMNETIFMKFRVPAPFPSLTKW 181
K ++ + + Y E K E+EE+ VL ++ K+ E++ + SL
Sbjct: 1296 KMEEVTETFLSLEKSYDEVKIENEELNVLVLRLQGKIEKLQESVVQRCDCCLWEASLENL 1355
Query: 182 TL----NIVNLRCETQDILKHASNLTKSSSELKKEVDEME-----------IEINYLNQQ 226
+ NI+ L ++ + ++ E K+E +E EI +L+
Sbjct: 1356 EIEPDGNILQLNQTLEECVPRVRSVHHVIEECKQENQYLEGNTQLLEKVKAHEIAWLHGT 1415
Query: 227 ISRHNE--------------------------TKALSETLEEKNKNTENRKELKERI--- 257
I H E ++E EK K E ++LKER+
Sbjct: 1416 IQTHQERPRVQNQVILEENTTLLGFQDKHFQHQATIAELELEKTKLQELTRKLKERVTIL 1475
Query: 258 --------FGKDEHVL---------TLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADI 300
G+ E L T ++ Q L YES+KL + + +E + +
Sbjct: 1476 VKQKDVLSHGEKEEELKAMMHDLQITCSEMQQKVELLRYESEKLQQENSILRNE--ITTL 1533
Query: 301 KEESSAKQSKLANIDFRQKE 320
EE S KL ++ Q+E
Sbjct: 1534 NEEDSISNLKLGTLNGSQEE 1553
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 41.6 bits (96), Expect = 0.002
Identities = 61/308 (19%), Positives = 127/308 (41%), Gaps = 55/308 (17%)
Query: 59 DEEIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDY--------MQDQFTVYQGTVEKDKEM 110
++++ HY K +E +C+ + ++E + ++++ QG KE
Sbjct: 630 EDKVRHYEKQLDETVVSCKKAQENMKQRHENETHTLEKQISDLKNEIAELQGQAAVLKEA 689
Query: 111 YHDYICQYKEVLKQYQLKYSETPFSREYYEKKREHEEIQSRVLAC-----TEQLKMNETI 165
+H+ C+++E KQ Q+K E + + + E+++R+ E+ + +
Sbjct: 690 HHEATCRHEEEKKQLQVKLEEEKTHLQEKLRLQHEMELKARLTQAQASFEREREGLQSSA 749
Query: 166 FMKFRVPAPFPSLTKW-----TLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEI 220
+ + +V L ++ T + E +++ K L K EL++ ++ME E
Sbjct: 750 WTEEKVRGLTQELEQFHQEQLTSLVEKHTLEKEELRKEL--LEKHQRELQEGREKMETEC 807
Query: 221 NYLNQQISR--HNETKALSETLEEKNKNTENR-----KELKER--------IFGKDEHVL 265
N QI ++ + ++E E ++ E R K+L+E+ F KDE
Sbjct: 808 NRRTSQIEAQFQSDCQKVTERCESALQSLEGRYRQELKDLQEQQREEKSQWEFEKDELTQ 867
Query: 266 -----------TLNKTQSSQLFLPYESQKLVRPIKMHSSEPRV---------ADIKEESS 305
TL + +++ L L E + L + K H + V D++ S
Sbjct: 868 ECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEHLNSMVVERQQLLQDLEDLRNVSE 927
Query: 306 AKQSKLAN 313
+QS L++
Sbjct: 928 TQQSLLSD 935
Score = 36.6 bits (83), Expect = 0.066
Identities = 66/320 (20%), Positives = 118/320 (36%), Gaps = 68/320 (21%)
Query: 67 KHSEEIKDNCRNWKPTCDVFRKHEDYMQDQF----TVYQGTVEKDKEMYHDYICQYKEVL 122
K E I + +K + + D +Q++ T Y +E +KE+ + E+
Sbjct: 1236 KMLERIPEASPKYKLLYEDVSRENDCLQEELRMMETRYDEALENNKELTAEVFRLQDELK 1295
Query: 123 KQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQL-KMNETIFMKFRVPAPFPSLTKW 181
K ++ + + Y E K E+EE+ VL ++ K+ E++ + SL
Sbjct: 1296 KMEEVTETFLSLEKSYDEVKIENEELNVLVLRLQGKIEKLQESVVQRCDCCLWEASLENL 1355
Query: 182 TL----NIVNLRCETQDILKHASNLTKSSSELKKEVDEME-----------IEINYLNQQ 226
+ NI+ L ++ + ++ E K+E +E EI +L+
Sbjct: 1356 EIEPDGNILQLNQTLEECVPRVRSVHHVIEECKQENQYLEGNTQLLEKVKAHEIAWLHGT 1415
Query: 227 ISRHNE--------------------------TKALSETLEEKNKNTENRKELKERI--- 257
I H E ++E EK K E ++LKER+
Sbjct: 1416 IQTHQERPRVQNQVILEENTTLLGFQDKHFQHQATIAELELEKTKLQELTRKLKERVTIL 1475
Query: 258 --------FGKDEHVL---------TLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADI 300
G+ E L T ++ Q L YES+KL + + +E + +
Sbjct: 1476 VKQKDVLSHGEKEEELKAMMHDLQITCSEMQQKVELLRYESEKLQQENSILRNE--ITTL 1533
Query: 301 KEESSAKQSKLANIDFRQKE 320
EE S KL ++ Q+E
Sbjct: 1534 NEEDSISNLKLGTLNGSQEE 1553
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 41.6 bits (96), Expect = 0.002
Identities = 61/308 (19%), Positives = 127/308 (41%), Gaps = 55/308 (17%)
Query: 59 DEEIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDY--------MQDQFTVYQGTVEKDKEM 110
++++ HY K +E +C+ + ++E + ++++ QG KE
Sbjct: 630 EDKVRHYEKQLDETVVSCKKAQENMKQRHENETHTLEKQISDLKNEIAELQGQAAVLKEA 689
Query: 111 YHDYICQYKEVLKQYQLKYSETPFSREYYEKKREHEEIQSRVLAC-----TEQLKMNETI 165
+H+ C+++E KQ Q+K E + + + E+++R+ E+ + +
Sbjct: 690 HHEATCRHEEEKKQLQVKLEEEKTHLQEKLRLQHEMELKARLTQAQASFEREREGLQSSA 749
Query: 166 FMKFRVPAPFPSLTKW-----TLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEI 220
+ + +V L ++ T + E +++ K L K EL++ ++ME E
Sbjct: 750 WTEEKVRGLTQELEQFHQEQLTSLVEKHTLEKEELRKEL--LEKHQRELQEGREKMETEC 807
Query: 221 NYLNQQISR--HNETKALSETLEEKNKNTENR-----KELKER--------IFGKDEHVL 265
N QI ++ + ++E E ++ E R K+L+E+ F KDE
Sbjct: 808 NRRTSQIEAQFQSDCQKVTERCESALQSLEGRYRQELKDLQEQQREEKSQWEFEKDELTQ 867
Query: 266 -----------TLNKTQSSQLFLPYESQKLVRPIKMHSSEPRV---------ADIKEESS 305
TL + +++ L L E + L + K H + V D++ S
Sbjct: 868 ECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEHLNSMVVERQQLLQDLEDLRNVSE 927
Query: 306 AKQSKLAN 313
+QS L++
Sbjct: 928 TQQSLLSD 935
Score = 36.6 bits (83), Expect = 0.066
Identities = 66/320 (20%), Positives = 118/320 (36%), Gaps = 68/320 (21%)
Query: 67 KHSEEIKDNCRNWKPTCDVFRKHEDYMQDQF----TVYQGTVEKDKEMYHDYICQYKEVL 122
K E I + +K + + D +Q++ T Y +E +KE+ + E+
Sbjct: 1236 KMLERIPEASPKYKLLYEDVSRENDCLQEELRMMETRYDEALENNKELTAEVFRLQDELK 1295
Query: 123 KQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQL-KMNETIFMKFRVPAPFPSLTKW 181
K ++ + + Y E K E+EE+ VL ++ K+ E++ + SL
Sbjct: 1296 KMEEVTETFLSLEKSYDEVKIENEELNVLVLRLQGKIEKLQESVVQRCDCCLWEASLENL 1355
Query: 182 TL----NIVNLRCETQDILKHASNLTKSSSELKKEVDEME-----------IEINYLNQQ 226
+ NI+ L ++ + ++ E K+E +E EI +L+
Sbjct: 1356 EIEPDGNILQLNQTLEECVPRVRSVHHVIEECKQENQYLEGNTQLLEKVKAHEIAWLHGT 1415
Query: 227 ISRHNE--------------------------TKALSETLEEKNKNTENRKELKERI--- 257
I H E ++E EK K E ++LKER+
Sbjct: 1416 IQTHQERPRVQNQVILEENTTLLGFQDKHFQHQATIAELELEKTKLQELTRKLKERVTIL 1475
Query: 258 --------FGKDEHVL---------TLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADI 300
G+ E L T ++ Q L YES+KL + + +E + +
Sbjct: 1476 VKQKDVLSHGEKEEELKAMMHDLQITCSEMQQKVELLRYESEKLQQENSILRNE--ITTL 1533
Query: 301 KEESSAKQSKLANIDFRQKE 320
EE S KL ++ Q+E
Sbjct: 1534 NEEDSISNLKLGTLNGSQEE 1553
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 41.2 bits (95), Expect = 0.003
Identities = 55/270 (20%), Positives = 108/270 (40%), Gaps = 36/270 (13%)
Query: 67 KHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLK-QY 125
K +++ N+K T F+ + D Y+ +E+++ M + + KE K
Sbjct: 800 KTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDS 859
Query: 126 QLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNI 185
L +T S + E + + E+Q R +NE +K ++ +L
Sbjct: 860 SLGALKTELSYKTQELQEKTREVQER---------LNEMEQLKEQLENRDSTLQTVEREK 910
Query: 186 VNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNK 245
+ + Q L+ LT+ +LK+ + ++IE + L I + N
Sbjct: 911 TLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIH------------DTVNM 958
Query: 246 NTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESS 305
N + +++L+ + +H T+N +S S+++ R + M E + K+E
Sbjct: 959 NIDTQEQLRNALESLKQHQETINTLKSK------ISEEVSRNLHM---EENTGETKDEF- 1008
Query: 306 AKQSKLANIDFRQ--KENDTQIFNDSAVDN 333
Q K+ ID +Q + +TQ DN
Sbjct: 1009 --QQKMVGIDKKQDLEAKNTQTLTADVKDN 1036
Score = 33.9 bits (76), Expect = 0.43
Identities = 63/375 (16%), Positives = 148/375 (39%), Gaps = 50/375 (13%)
Query: 21 EQDISTKEEMIQRINKCCEDIKENKVTI-------CRIHETINATDEEIDHYCKHSEEIK 73
++++S ++ I I ++K ++T+ + + +N EE+ K + +K
Sbjct: 1147 QEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLK 1206
Query: 74 DNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKE---MYHDYICQYKEVLKQYQLKYS 130
+ ++ F D+++ + T + KE + H ++ +++E + + + S
Sbjct: 1207 ELQKS-------FETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVS 1259
Query: 131 E-TPFSREYYEKKREHEEIQSRVLACTEQLK--------------MNET-IFMKFRVPAP 174
E T + ++ H ++Q + E+ + MNE + +
Sbjct: 1260 EKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKD 1319
Query: 175 FPSLTKWTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQI----SRH 230
+L + + + L + Q+ + +LTK LK + +E++ + L + I ++
Sbjct: 1320 STTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKI 1379
Query: 231 NETKALSE---TLEEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRP 287
E+++ E ++EK+ T E+ KD +L + + L L Q
Sbjct: 1380 QESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALL---RIEIEMLGLSKRLQ----- 1431
Query: 288 IKMHSSEPRVADIKEESSAKQSKLANIDFRQKENDTQIF-NDSAVDNHSKCSHITTITSS 346
+ H VA K++ Q L + + KEN +I + K +H
Sbjct: 1432 -ESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQE 1490
Query: 347 QKFMQVRLLTPQKQS 361
+ ++R+ +K++
Sbjct: 1491 ETINELRVNLSEKET 1505
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 41.2 bits (95), Expect = 0.003
Identities = 68/373 (18%), Positives = 156/373 (41%), Gaps = 31/373 (8%)
Query: 63 DHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVL 122
D H EI++ ++ + K ++ ++ +++ VE +M + + K+++
Sbjct: 69 DLQAAHRREIQELLKSQQDHSASVNKGQEKAEE---LHRMEVESLNKMLEELRLERKKLI 125
Query: 123 KQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWT 182
+ Y+ K ++ ++ +YE++ + + A + Q + ++ L K
Sbjct: 126 EDYEGKLNK---AQSFYERELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRK-- 180
Query: 183 LNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQI--SRHNETKALSETL 240
I L+ E Q + A +L +L+ + E + L +Q+ ++ E LS+
Sbjct: 181 -TIGKLKTELQMVQDEAGSLLDKCQKLQTALAIAENNVQVLQKQLDDAKEGEMALLSKHK 239
Query: 241 EEKNKNTENRKELKER---IFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSE--P 295
E +++ R+ L+++ + K H+ L TQ +Q + ++ ++ S
Sbjct: 240 EVESELAAARERLQQQASDLVLKASHIGMLQATQMTQ-------EVTIKDLESEKSRVNE 292
Query: 296 RVADIKEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRL- 354
R++ ++EE + +SK ++D QK+ QI N +K + K +Q RL
Sbjct: 293 RLSQLEEERAFLRSKTQSLDEEQKQ---QILELEKKVNEAKRTQQEYYERELKNLQSRLE 349
Query: 355 --LTPQKQSNSNQWSEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGK--SIENDSDE 410
+T +++S E K + +R+ K + +H ++E D ++
Sbjct: 350 EEVTQLNEAHSKTLEELAWKHHMAIEAVHSNAIRDKKKLQMDLEEQHNKDKLNLEEDKNQ 409
Query: 411 VEERAENFPRTSE 423
+++ EN E
Sbjct: 410 LQQELENLKEVLE 422
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 41.2 bits (95), Expect = 0.003
Identities = 68/373 (18%), Positives = 156/373 (41%), Gaps = 31/373 (8%)
Query: 63 DHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVL 122
D H EI++ ++ + K ++ ++ +++ VE +M + + K+++
Sbjct: 189 DLQAAHRREIQELLKSQQDHSASVNKGQEKAEE---LHRMEVESLNKMLEELRLERKKLI 245
Query: 123 KQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWT 182
+ Y+ K ++ ++ +YE++ + + A + Q + ++ L K
Sbjct: 246 EDYEGKLNK---AQSFYERELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRK-- 300
Query: 183 LNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQI--SRHNETKALSETL 240
I L+ E Q + A +L +L+ + E + L +Q+ ++ E LS+
Sbjct: 301 -TIGKLKTELQMVQDEAGSLLDKCQKLQTALAIAENNVQVLQKQLDDAKEGEMALLSKHK 359
Query: 241 EEKNKNTENRKELKER---IFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSE--P 295
E +++ R+ L+++ + K H+ L TQ +Q + ++ ++ S
Sbjct: 360 EVESELAAARERLQQQASDLVLKASHIGMLQATQMTQ-------EVTIKDLESEKSRVNE 412
Query: 296 RVADIKEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRL- 354
R++ ++EE + +SK ++D QK+ QI N +K + K +Q RL
Sbjct: 413 RLSQLEEERAFLRSKTQSLDEEQKQ---QILELEKKVNEAKRTQQEYYERELKNLQSRLE 469
Query: 355 --LTPQKQSNSNQWSEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGK--SIENDSDE 410
+T +++S E K + +R+ K + +H ++E D ++
Sbjct: 470 EEVTQLNEAHSKTLEELAWKHHMAIEAVHSNAIRDKKKLQMDLEEQHNKDKLNLEEDKNQ 529
Query: 411 VEERAENFPRTSE 423
+++ EN E
Sbjct: 530 LQQELENLKEVLE 542
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 40.0 bits (92), Expect = 0.006
Identities = 63/295 (21%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 120 EVLKQYQLKYSE----TPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPF 175
E+ K+ L+ E T + +Y + E++ +Q + A ++L++ + F+ +
Sbjct: 193 ELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQDELRIQRDLNQLFQQDSSS 252
Query: 176 ----PSLTKWTL-NIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRH 230
P + + T N L E + K L+K ++EME+ I Q ++
Sbjct: 253 RTGEPCVAELTEENFQRLHAEHE-------RQAKELFLLRKTLEEMELRIETQKQTLNAR 305
Query: 231 NET-KALSETLEEKN---KNTENRKELKERIFGKDEHV------LTLNKTQSSQLFLPYE 280
+E+ K L E L+ K K TE E R+ + HV L + ++S L
Sbjct: 306 DESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENSML----- 360
Query: 281 SQKLVRPIKMHSSEPRVADIKEESSAKQSKLANID--FRQKENDTQIFND----SAVDNH 334
+++ R + + ++ K SK+++++ R E + Q+ S +
Sbjct: 361 REEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEERE 420
Query: 335 SKCSHITTITSSQKFM--QVRLLTPQKQSNSNQWSEKGDKDAEYGDKGTVRQVRE 387
+ + S KFM +V L + S QW E K A G + + QV++
Sbjct: 421 EEMKQMEVYRSHSKFMKNKVEQLKEELSSKEAQWEELKKKAA--GLQAEIGQVKQ 473
Score = 37.4 bits (85), Expect = 0.039
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 200 SNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTENRKELKERIFG 259
+N K EL +++++ E+ + ++S ++ A ET N E RK L+E +
Sbjct: 868 TNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKET-HLTNLRAERRKHLEEVLEM 926
Query: 260 KDEHVLT-LNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESSAKQSKLANIDFRQ 318
K E +L +++ ++ L S K ++ VA +K E +L +Q
Sbjct: 927 KQEALLAAISEKDANIALLELSSSK-------KKTQEEVAALKREKDRLVQQLK----QQ 975
Query: 319 KENDTQIFNDSAVDNHSKCSH 339
+N ++ D+ D+H K SH
Sbjct: 976 TQNRMKLMADNYEDDHFKSSH 996
Score = 33.5 bits (75), Expect = 0.56
Identities = 28/132 (21%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 188 LRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHN-ETKALSETLEEKNKN 246
++ + + + + S+ ELKK+ ++ EI + Q++SR + E AL LE
Sbjct: 436 MKNKVEQLKEELSSKEAQWEELKKKAAGLQAEIGQVKQELSRKDTELLALQTKLETLTNQ 495
Query: 247 TENRKE----LKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKE 302
+ K+ LKE + K++ L +T+ L L E ++ + ++ ++ D+ E
Sbjct: 496 FSDSKQHIEVLKESLTAKEQRAAIL-QTEVDALRLRLEEKETM----LNKKTKQIQDMAE 550
Query: 303 ESSAKQSKLANI 314
E + ++ ++
Sbjct: 551 EKGTQAGEIHDL 562
Score = 31.2 bits (69), Expect = 2.8
Identities = 56/302 (18%), Positives = 118/302 (39%), Gaps = 56/302 (18%)
Query: 24 ISTKEEMIQRINKCCEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKDNCRNWKPTC 83
I K+ I + + D++E ++ + + + ++ + E EE+K
Sbjct: 384 IEMKDSKISSMERGLRDLEE-EIQMLKSNGALSTEERE--------EEMKQ--------M 426
Query: 84 DVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYYEKKR 143
+V+R H +M+++ VE+ KE Q++E LK E + K+
Sbjct: 427 EVYRSHSKFMKNK-------VEQLKEELSSKEAQWEE------LKKKAAGLQAEIGQVKQ 473
Query: 144 EHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNIVNLRCETQDILKHASNLT 203
E + +LA +L ET+ +F + K +L R
Sbjct: 474 ELSRKDTELLALQTKL---ETLTNQFSDSKQHIEVLKESLTAKEQR-------------- 516
Query: 204 KSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTENRKELKERIFGKDEH 263
++ L+ EVD + + + +++ +TK + + EEK +LK+ + K+
Sbjct: 517 --AAILQTEVDALRLRLEEKETMLNK--KTKQIQDMAEEKGTQAGEIHDLKDMLDVKERK 572
Query: 264 VLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESSAKQSKLANIDFRQKENDT 323
V L K + + Q + +M S + RV ++ +++ + L ++ E +
Sbjct: 573 VNVLQKKIEN-----LQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEKER 627
Query: 324 QI 325
I
Sbjct: 628 TI 629
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 40.0 bits (92), Expect = 0.006
Identities = 56/304 (18%), Positives = 117/304 (38%), Gaps = 27/304 (8%)
Query: 126 QLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNI 185
+L S E Y EE++ + E+L++ E+ K + L K L
Sbjct: 185 ELTKERDALSLELYRNTITDEELKEKNAKLQEKLQLVES--EKSEIQLNVKEL-KRKLER 241
Query: 186 VNLRCETQDILKHASNLTKS----SSELKKEVDEMEIEINYLNQQISRH--NETKALSET 239
L Q + A +L K S++L+ +V+E E+ N LNQQ + + + E
Sbjct: 242 AKLLLPQQQLQAEADHLGKELQSVSAKLQAQVEENELW-NRLNQQQEEKMWRQEEKIQER 300
Query: 240 LEEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVAD 299
E+ + E +E +E++ ++E + + Q + +E ++ +R ++ E
Sbjct: 301 EEKIQEQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIR 360
Query: 300 IKEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLTPQK 359
+EE ++ K+ + RQ++ + + Q + Q+
Sbjct: 361 EQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIRE-----------------QEEKIREQE 403
Query: 360 QSNSNQWSEKGDKDAEYGDKGTVRQVRESKCTSQAIYTEHFGKSIENDSDEVEERAENFP 419
+ Q + G+++ + ++ Q +E K Q K I +++ E+ E
Sbjct: 404 EMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQ 463
Query: 420 RTSE 423
E
Sbjct: 464 EQEE 467
Score = 32.0 bits (71), Expect = 1.6
Identities = 56/304 (18%), Positives = 127/304 (41%), Gaps = 27/304 (8%)
Query: 12 LLLEFVFQYEQDISTKEEMIQRIN-KCCEDIKENKVTICRIHETINATDEEIDHYCKHSE 70
LL + Q E D KE +Q ++ K ++EN+ + +N EE + E
Sbjct: 245 LLPQQQLQAEADHLGKE--LQSVSAKLQAQVEENE-----LWNRLNQQQEE--KMWRQEE 295
Query: 71 EIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYS 130
+I++ + + R+ E+ M+ Q + EK + + + + +E +++ + K
Sbjct: 296 KIQEREEKIQEQEEKIREQEEKMRRQEEMMWEKEEKMRRQ-EEMMWEKEEKIRELEEKMH 354
Query: 131 ETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSLTKWTLNIVNLRC 190
E RE EK++E E+I+ EQ K E +R + +R
Sbjct: 355 EQEKIREQEEKRQEEEKIR-------EQEKRQEQEAKMWRQEEKIREQEE------KIRE 401
Query: 191 ETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNTENR 250
+ + + + + + ++ ++ +EM+ + + +Q + E + EEK + E
Sbjct: 402 QEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEM 461
Query: 251 KELKERIFGKDEHVLTLN--KTQSSQLFLPYESQKL-VRPIKMHSSEPRVADIKEESSAK 307
+ +E G+ E + K Q + + + +K+ + K+ E ++ + +E +
Sbjct: 462 MQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQ 521
Query: 308 QSKL 311
+ K+
Sbjct: 522 EEKM 525
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 40.0 bits (92), Expect = 0.006
Identities = 72/330 (21%), Positives = 135/330 (40%), Gaps = 51/330 (15%)
Query: 97 FTVYQGTVE-------KDKEMYHDYICQYKEVLKQYQLKYSE-------TPFS------- 135
F V+QG VE K++ + I + E+ ++Y + E T F+
Sbjct: 133 FLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNI 192
Query: 136 -REYYEKKREHEE------IQSRVLACTEQLKM-----NETIFMKFR--VPAPFPSLTKW 181
E E K+E EE ++ V+ QL++ NE K + + + K
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 182 TLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLN-QQISRHNETKALSETL 240
+ + E ++ K + + +++KE+ E + E+N Q I T + L
Sbjct: 253 KKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKL 312
Query: 241 EEKNKNTEN-RKELKERIFGKDE---HVLTLNKT-QSSQLFLPYESQKLVRPIKMHSSE- 294
E K+ +N +K K+R DE +L++ K Q + + ESQ R + + ++
Sbjct: 313 EAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQV 372
Query: 295 PRVADIKEESSAKQSKLA------NIDFRQKENDTQIFNDSAVDNHSKCSH-ITTITSSQ 347
+ +KEE+S + + LA N D + ++ + V+ +K + I +Q
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQ 432
Query: 348 KFMQ--VRLLTPQKQSNSNQWSEKGDKDAE 375
K ++ +T KQS Q +G+ E
Sbjct: 433 KRIEKLEEYITTSKQSLEEQKKLEGELTEE 462
Score = 33.5 bits (75), Expect = 0.56
Identities = 58/298 (19%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 44 NKVTICRIHETINATDEEIDHYCKHSEEIKDNCRNWKPTCDVFRKHEDYMQDQFTVYQGT 103
N+V I ++++ + + ++EI+ K ++++D +
Sbjct: 231 NEVEIEKLNKELASKNKEIEKDKKRMDKVEDELK-------------------------- 264
Query: 104 VEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNE 163
EK KE+ + + +++ K+ + K SE R Y K +E+ + + L ++ N
Sbjct: 265 -EKKKEL-GKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNA 322
Query: 164 TIFMKFRVPAPFPSLTKWTLNIVNLRCETQDILKHAS-----NLTKSSSELKKE---VDE 215
K R L K L++ R E ++ ++ S +LT +++KK +E
Sbjct: 323 QKHYKKR-KGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEE 381
Query: 216 MEIEINYLNQQISRHN-ETKALSETLE-EKNKNTENRKELKERIFGKDEHVLTLNK---- 269
L Q++ + N + KA + L+ E+ K E ++K+++ +E+ + K
Sbjct: 382 ASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQKRIEKLEEY 441
Query: 270 -TQSSQLFLPYESQKLVRPI--KMHSSEPRVADIKEESSAKQSKLANIDFRQKENDTQ 324
T S Q E +KL + ++ ++ R+ +I +E + +L + ++E+ Q
Sbjct: 442 ITTSKQSL--EEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESSRQ 497
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 40.0 bits (92), Expect = 0.006
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 43/266 (16%)
Query: 88 KHEDYMQDQFTVYQ--GTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYYEKK--- 142
KH +M+ F + + E +KEM KE ++ + + ++T R+ E+K
Sbjct: 829 KHWPWMKLYFKIKPLLKSAETEKEM-----ANMKEEFEKTKEELAKTEAKRKELEEKMVT 883
Query: 143 --REHEEIQSRVLACTEQL-----KMNETIFMKFRVPAPFPSLTKWTLNIVNLRCETQDI 195
+E ++Q +V A + L + ++ I K ++ A +T+ + + E +
Sbjct: 884 LMQEKNDLQLQVQAEADSLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAE---L 940
Query: 196 LKHASNLTKSSSELKKEVDEMEIEINYL-NQQISRHNETKALSETL----EEKNKNTENR 250
L SELKK++D++E+ + + ++ + N+ K L+E + E K T+ +
Sbjct: 941 TAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDETIAKLTKEK 1000
Query: 251 KELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESSAKQSK 310
K L+E H TL+ Q+ + + + K+ E +V D+ E S +Q K
Sbjct: 1001 KALQE------AHQQTLDDLQAEE-----DKVNTLTKAKI-KLEQQVDDL--EGSLEQEK 1046
Query: 311 LANIDF----RQKENDTQIFNDSAVD 332
+D R+ E D ++ +S +D
Sbjct: 1047 KIRMDLERAKRKLEGDLKLAQESTMD 1072
Score = 35.0 bits (79), Expect = 0.19
Identities = 73/389 (18%), Positives = 159/389 (40%), Gaps = 55/389 (14%)
Query: 23 DISTKEEMIQRINKC-------CEDIKENKVTICRIHETINATDEEIDHYCKHSEEIKDN 75
D+ +E+ + + K +D++ + +I + +++ K ++E +
Sbjct: 1013 DLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKIRMDLERAKRKLEGDLKLAQESTMD 1072
Query: 76 CRNWKPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEV---LKQYQLKYSET 132
N K D K +++ + + Q +E ++ + + KE+ +++ + +
Sbjct: 1073 IENDKQQLDEKLKKKEF---EMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAE 1129
Query: 133 PFSREYYEKKR-----EHEEIQSRVL----ACTEQLKMN---ETIFMKFRVPAPFPSLTK 180
SR EK+R E EEI R+ A + Q++MN E F K R +L +
Sbjct: 1130 RASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATL-Q 1188
Query: 181 WTLNIVNLRCETQDIL----KHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKA- 235
LR + D + + NL + +L+KE EM++EI+ L + ++ K
Sbjct: 1189 HEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMETVSKAKGN 1248
Query: 236 ---LSETLEEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHS 292
+ LE++ + ++E ++R+ +N + + L ES + R +
Sbjct: 1249 LEKMCRALEDQLSEIKTKEEEQQRL---------INDLTAQRARLQTESGEYSRQL---- 1295
Query: 293 SEPRVADIKEESSAKQSKLANIDFRQKENDTQIFNDSAV-----DNHSKCSHITTITSSQ 347
+ + + + S KQ+ I+ +++ + +I SA+ + C + +
Sbjct: 1296 -DEKDTLVSQLSRGKQAFTQQIEELKRQLEEEIKAKSALAHALQSSRHDCDLLREQYEEE 1354
Query: 348 KFMQVRLLTPQKQSNSN--QWSEKGDKDA 374
+ + L ++NS QW K + DA
Sbjct: 1355 QEAKAELQRAMSKANSEVAQWRTKYETDA 1383
Score = 32.7 bits (73), Expect = 0.95
Identities = 55/316 (17%), Positives = 127/316 (40%), Gaps = 34/316 (10%)
Query: 31 IQRINKCCEDIKENKVTICRI-----------HETINATDEEIDHYCKHSEEIKDNCRNW 79
++R N C + + + +I H + A+ +E +IK+
Sbjct: 1436 VERTNAACAALDKKQRNFDKILAEWKQKCEETHAELEASQKESRSLSTELFKIKNAYEES 1495
Query: 80 KPTCDVFRKHEDYMQDQFTVYQGTVEKDKEMYHDYICQYKEVLKQYQLKYSETPFSREYY 139
+ ++ +Q + + + + + H+ +++ KQ + + SE + E
Sbjct: 1496 LDQLETLKRENKNLQQEISDLTEQIAEGGKRIHEL----EKIKKQVEQEKSELQAALEEA 1551
Query: 140 EKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAP----FPSLTKWTLNIVNLRCETQDI 195
E EHEE ++L QL++N+ R A + + + IV T D
Sbjct: 1552 EASLEHEE--GKILRI--QLELNQVKSEVDRKIAEKDEEIDQMKRNHIRIVESMQSTLDA 1607
Query: 196 -LKHASNLTKSSSELKKEVDEMEIEINYLNQQISR-----HNETKALSETLEEKNKNTEN 249
++ ++ + +++ +++EMEI++N+ N+ + N L +T + +
Sbjct: 1608 EIRSRNDAIRLKKKMEGDLNEMEIQLNHANRMAAEALRNYRNTQAILKDTQLHLDDALRS 1667
Query: 250 RKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESSAKQS 309
+++LKE++ E L + + +L E + R I +E + D E +
Sbjct: 1668 QEDLKEQL-AMVERRANLLQAEIEELRATLEQTERSRKI----AEQELLDASERVQLLHT 1722
Query: 310 KLANIDFRQKENDTQI 325
+ ++ +K+ +T I
Sbjct: 1723 QNTSLINTKKKLETDI 1738
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 39.7 bits (91), Expect = 0.008
Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 33/256 (12%)
Query: 119 KEVLKQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLKMNETIFMKFRVPAPFPSL 178
KE+L+Q K +E + +EK+ SR L + M E F+K SL
Sbjct: 684 KEMLEQTLQKVTELENRLKSFEKR-------SRKLKEGNKKLMKENDFLK--------SL 728
Query: 179 TKWTLNIVNLR-CETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALS 237
K R E + I+K + ++ K ++EL+ ++ E+E E+ L +Q++ N
Sbjct: 729 LKQQQEDTETREKELEQIIKGSKDVEKENTELQVKISELETEVTSLRRQVAEAN------ 782
Query: 238 ETLEEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSSEPRV 297
L +N+ N E + + + + K +S + Y+ + + +K +++
Sbjct: 783 -ALRNENEELINPMEKSHQSADRAKSEMATMKVRSGR----YDCKTTMTKVKFKAAK--- 834
Query: 298 ADIKEESSAKQSKLANIDFRQKENDTQIFNDSAVDNHSKCSHITTITSSQKFMQVRLLTP 357
K S + + N + N + + ++ S+ S + +SQ + + T
Sbjct: 835 ---KNCSVGRHHTVLNHSIKVMSNVFENLSKDGWEDVSESSSDSEAQTSQTLGTIIVETS 891
Query: 358 QKQSNSNQWSEKGDKD 373
QK S + ++ + D
Sbjct: 892 QKISPTEDGKDQKESD 907
Score = 35.4 bits (80), Expect = 0.15
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Query: 123 KQYQLKYSETPFSREYYEKKREH-EEIQSRVLACTEQLKMNE-----TIFMKFRVPAPFP 176
K QLK E R+ +EK++E + +Q+ A EQLK E T K + P
Sbjct: 543 KALQLKSQENDELRDAHEKRKERLQMLQTNYRAVKEQLKQWEEGSGMTEIRKIKRADPQQ 602
Query: 177 -----SLTKWTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHN 231
S W + + E Q+++ NL + ELK + + I LN+ ++
Sbjct: 603 LRQEDSDAVWN-ELAYFKRENQELMIQKMNLEEELDELKVHISIDKAAIQELNRCVAERR 661
Query: 232 ETKALSETLEEKNKNTENRKELKERI 257
E + +++ K + K KE +
Sbjct: 662 EEQLFRSGEDDEVKRSTPEKNGKEML 687
Score = 34.3 bits (77), Expect = 0.33
Identities = 29/140 (20%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 188 LRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNETKALSETLEEKNKNT 247
L+ E D++K + + ++ L+KE ++E + +Q+I +TK + EE+N+
Sbjct: 183 LKQEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEI---KDTKECVQNKEEQNRLV 239
Query: 248 -ENRKELKERIFGKDEHVLT-LNKTQSSQLFLPYESQKLVRPIKMHSSEPRVADIKEESS 305
+N +E +++ + +L L K + + L +K K+ + E + + ++E
Sbjct: 240 IKNLEEENKKLSTRCTDLLNDLEKLRKQEAHL--RKEKYSTDAKIKTFEDNLIEARKEVE 297
Query: 306 AKQSKLANIDFRQKENDTQI 325
QSK + + T++
Sbjct: 298 VSQSKYNALSLQLSNKQTEL 317
Score = 32.7 bits (73), Expect = 0.95
Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 19/181 (10%)
Query: 122 LKQYQLKYSETPFSREYYEKKREHEEIQSRVLACTEQLK--------MNETIFMKFRVPA 173
L+ QL+Y + E ++ + ++ +LA E +K M I MK +
Sbjct: 1092 LEMKQLQYKLKNATNELTKQSSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKRHLIE 1151
Query: 174 PFPSLTKWTLNIVNLRCETQDILKHASNLTKSSSELKKEVDEMEIEINYLNQQISRHNET 233
K VNL + + NL K L +E ++ I+ L Q+++ +
Sbjct: 1152 DLKFRQK-----VNLE-SNKSFSEMLQNLDKKVKTLTEECSNKKVSIDSLKQRLNVAVKE 1205
Query: 234 KALSETLEEKNKNTENRKELKERIFGKDEHVLTLNKTQSSQLFLPYESQKLVRPIKMHSS 293
K+ E + +K+K +K+LK + V +++T+S+ + + K ++ + + S
Sbjct: 1206 KSQYEQMYQKSKEELEKKDLKLTLL-----VSRISETESAMAEIETAASKQLQELALQSE 1260
Query: 294 E 294
+
Sbjct: 1261 Q 1261
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,288,652
Number of Sequences: 37866
Number of extensions: 1051144
Number of successful extensions: 3872
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 3467
Number of HSP's gapped (non-prelim): 708
length of query: 587
length of database: 18,247,518
effective HSP length: 108
effective length of query: 479
effective length of database: 14,157,990
effective search space: 6781677210
effective search space used: 6781677210
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.