PARL 11859

Name: PARL	Sequence: fasta or formatted (379aa)		NCBI GI: 20127652
Description: presenilin associated, rhomboid-like isoform 1 preproprotein		Referenced in: Notch Pathway
Other entries for this name: alt prot [329aa] presenilin associated, rhomboid-like isoform 2 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 33 2 C cysteine 1.8 7 1 D aspartate 2.1 8 1 E glutamate 3.7 14 2 F phenylalanine 6.6 25 2 G glycine 9.8 37 3 H histidine 1.6 6 1 I isoleucine 6.6 25 2 K lysine 5.3 20 2 L leucine 7.9 30 2 M methionine 2.6 10 1 N asparagine 3.2 12 2 P proline 5.3 20 2 Q glutamine 3.2 12 2 R arginine 5.8 22 2 S serine 7.9 30 3 T threonine 5.0 19 1 V valine 6.1 23 1 W tryptophan 3.7 14 2 Y tyrosine 3.2 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 presenilin associated, rhomboid-like isoform 1 prepr... PARL 0.837 presenilin associated, rhomboid-like isoform 2 prepr... CHRM3 0.013 cholinergic receptor, muscarinic 3 RHBDF1 0.013 rhomboid family 1 TRIP12 0.007 thyroid hormone receptor interactor 12 ZFP92 0.007 zinc finger protein 92 homolog ATP13A3 0.005 ATPase type 13A3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.