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Search of human proteins with 190341091
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|190341091 feline leukemia virus subgroup C cellular receptor
family, member 2 [Homo sapiens]
(526 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|190341091 feline leukemia virus subgroup C cellular receptor ... 1044 0.0
gi|7661708 feline leukemia virus subgroup C cellular receptor 1 ... 558 e-159
gi|31542731 major facilitator superfamily domain containing 7 [H... 146 5e-35
gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens] 130 3e-30
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 43 6e-04
gi|5730045 solute carrier family 16, member 2 [Homo sapiens] 39 0.015
gi|148743791 solute carrier family 17 (sodium phosphate), member... 38 0.026
gi|239750721 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.058
gi|236459851 ubinuclein 2 [Homo sapiens] 36 0.076
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens] 35 0.13
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens] 35 0.13
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 35 0.17
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 35 0.17
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 35 0.17
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 35 0.17
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 34 0.29
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 34 0.29
gi|239749927 PREDICTED: hypothetical protein [Homo sapiens] 34 0.29
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 34 0.29
gi|239755199 PREDICTED: hypothetical protein [Homo sapiens] 34 0.38
gi|239746716 PREDICTED: hypothetical protein XP_002343819 [Homo ... 34 0.38
gi|148728191 solute carrier family 17 (sodium phosphate), member... 34 0.38
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 33 0.49
gi|63025206 hypothetical protein LOC221061 [Homo sapiens] 33 0.64
gi|117306178 hypothetical protein LOC55731 [Homo sapiens] 33 0.64
gi|117306174 hypothetical protein LOC55731 [Homo sapiens] 33 0.64
gi|117938759 GNAS complex locus XLas [Homo sapiens] 33 0.84
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 33 0.84
gi|122114658 hypothetical protein LOC23053 [Homo sapiens] 33 0.84
gi|27777653 sperm acrosome associated 3 [Homo sapiens] 32 1.1
>gi|190341091 feline leukemia virus subgroup C cellular receptor
family, member 2 [Homo sapiens]
Length = 526
Score = 1044 bits (2699), Expect = 0.0
Identities = 526/526 (100%), Positives = 526/526 (100%)
Query: 1 MVNEGPNQEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQ 60
MVNEGPNQEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQ
Sbjct: 1 MVNEGPNQEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQ 60
Query: 61 PSGLAHPSSSGPEDLSVIKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSA 120
PSGLAHPSSSGPEDLSVIKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSA
Sbjct: 61 PSGLAHPSSSGPEDLSVIKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSA 120
Query: 121 FAIDWLSMCYMLTYIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVT 180
FAIDWLSMCYMLTYIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVT
Sbjct: 121 FAIDWLSMCYMLTYIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVT 180
Query: 181 VVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNI 240
VVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNI
Sbjct: 181 VVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNI 240
Query: 241 EDRDELAYHISIMFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGS 300
EDRDELAYHISIMFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGS
Sbjct: 241 EDRDELAYHISIMFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGS 300
Query: 301 IARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLG 360
IARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLG
Sbjct: 301 IARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLG 360
Query: 361 AVISGIWLDRSKTYKETTLVVYIMTLVGMVVYTFTLNLGHLWVVFITAGTMGFFMTGYLP 420
AVISGIWLDRSKTYKETTLVVYIMTLVGMVVYTFTLNLGHLWVVFITAGTMGFFMTGYLP
Sbjct: 361 AVISGIWLDRSKTYKETTLVVYIMTLVGMVVYTFTLNLGHLWVVFITAGTMGFFMTGYLP 420
Query: 421 LGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPGNIFLCVFLTLG 480
LGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPGNIFLCVFLTLG
Sbjct: 421 LGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPGNIFLCVFLTLG 480
Query: 481 AALTAFIKADLRRQKANKETLENKLQEEEEESNTSKVPTAVSEDHL 526
AALTAFIKADLRRQKANKETLENKLQEEEEESNTSKVPTAVSEDHL
Sbjct: 481 AALTAFIKADLRRQKANKETLENKLQEEEEESNTSKVPTAVSEDHL 526
>gi|7661708 feline leukemia virus subgroup C cellular receptor 1
[Homo sapiens]
Length = 555
Score = 558 bits (1439), Expect = e-159
Identities = 281/509 (55%), Positives = 362/509 (71%), Gaps = 9/509 (1%)
Query: 21 LQADPSVSVHP-------SVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSGPE 73
LQ P P S++ V P + P L +G P +
Sbjct: 38 LQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLAPEEETQARLLPAGAGAETPGAES-S 96
Query: 74 DLSVIKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLT 133
L + +S RR+ V+L+FS YS+ N+FQWIQY I+N+F FYGV+ IDWLSM YML
Sbjct: 97 PLPLTALSPRRFVVLLIFSLYSLVNAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLA 156
Query: 134 YIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVVGQLICSVAQVF 193
Y+PL+ P WLL+ GLR AL GS LNCLGAW+K GS++ HLF VT++GQ +CSVAQVF
Sbjct: 157 YVPLIFPATWLLDTRGLRLTALLGSGLNCLGAWIKCGSVQQHLFWVTMLGQCLCSVAQVF 216
Query: 194 ILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIE-DRDELAYHISI 252
ILG+PSRIASVWFG EVSTAC+ AV GNQLG A+GFL+PPVLVPN + D + LA +IS
Sbjct: 217 ILGLPSRIASVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNIST 276
Query: 253 MFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGSIARLFKNLNFVL 312
MFY VATLL IL I FKEKP+YPPS+AQ+ + SY SI LFKN+ FVL
Sbjct: 277 MFYGTSAVATLLFILTAIAFKEKPRYPPSQAQAALQDSPPEEYSYKKSIRNLFKNIPFVL 336
Query: 313 LVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLGAVISGIWLDRSK 372
L+ITYG+ GAFY++STLLN+M++ +Y GEEVNAGRIGLT+V+AGM+G+++ G+WLD +K
Sbjct: 337 LLITYGIMTGAFYSVSTLLNQMILTYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTK 396
Query: 373 TYKETTLVVYIMTLVGMVVYTFTLNLGHLWVVFITAGTMGFFMTGYLPLGFEFAVELTYP 432
TYK+TTL+VYI++ +GMV++TFTL+L ++ +VF+T G +GFFMTGYLPLGFEFAVE+TYP
Sbjct: 397 TYKQTTLIVYILSFIGMVIFTFTLDLRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYP 456
Query: 433 ESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPGNIFLCVFLTLGAALTAFIKADLR 492
ESEG SSGLLN SAQ+FGI+FT++QG++ +YG K GNIFLCV++ +G LTA IK+DLR
Sbjct: 457 ESEGTSSGLLNASAQIFGILFTLAQGKLTSDYGPKAGNIFLCVWMFIGIILTALIKSDLR 516
Query: 493 RQKANKETLENKLQEEEEESNTSKVPTAV 521
R N ++ +S T + P V
Sbjct: 517 RHNINIGITNVDVKAIPADSPTDQEPKTV 545
>gi|31542731 major facilitator superfamily domain containing 7 [Homo
sapiens]
Length = 559
Score = 146 bits (368), Expect = 5e-35
Identities = 103/386 (26%), Positives = 185/386 (47%), Gaps = 31/386 (8%)
Query: 83 RRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLLLPVA 142
RRW +L S + N+ W+ + + ++ +S I+WLS+ Y++ P +
Sbjct: 28 RRWVFLLAISLLNCSNATLWLSFAPVADVIAEDLVLSMEQINWLSLVYLVVSTPFGVAAI 87
Query: 143 WLLEKFGLRTIALTGSALNCLGAWVKL------GSLKPHLFPVTVVGQLICSVAQVFILG 196
W+L+ GLR + G+ LN G+ +++ G+ P F + GQ +C++AQ ++
Sbjct: 88 WILDSVGLRAATILGAWLNFAGSVLRMVPCMVVGTQNP--FAFLMGGQSLCALAQSLVIF 145
Query: 197 MPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIEDRDELAYHISIM--- 253
P+++A++WF ++ +TA +A N LG+ + ++ PVLV ED I +M
Sbjct: 146 SPAKLAALWFPEHQRATANMLATMSNPLGVLVANVLSPVLVKKGED-------IPLMLGV 198
Query: 254 FYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGSIARLFKNLNFVLL 313
+ I GV LL I +++ P PPS A +S +L + L N +V+L
Sbjct: 199 YTIPAGVVCLL--STICLWESVPPTPPSAG-----AASSTSEKFLDGLKLLMWNKAYVIL 251
Query: 314 VITYGLNAGAFYALSTLLNRMVI--WHYPGEEVNAGRIGLTIVIAGMLGAVISGIWLDRS 371
+ G G + S LL +++ H G +G G + G+LGA+ G ++DR+
Sbjct: 252 AVCLGGMIGISASFSALLEQILCASGHSSG---FSGLCGALFITFGILGALALGPYVDRT 308
Query: 372 KTYKETTLVVYIMTLVGMVVYTFTLNL-GHLWVVFITAGTMGFFMTGYLPLGFEFAVELT 430
K + E T + + + V + L G + T +G F P+ E AVE +
Sbjct: 309 KHFTEATKIGLCLFSLACVPFALVSQLQGQTLALAATCSLLGLFGFSVGPVAMELAVECS 368
Query: 431 YPESEGISSGLLNISAQVFGIIFTIS 456
+P EG ++G++ + Q GI+ ++
Sbjct: 369 FPVGEGAATGMIFVLGQAEGILIMLA 394
>gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens]
Length = 478
Score = 130 bits (327), Expect = 3e-30
Identities = 102/390 (26%), Positives = 177/390 (45%), Gaps = 27/390 (6%)
Query: 79 KVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLL 138
+V RRW V+L+FS + W +G I N YG S++ I L + + ++P
Sbjct: 46 RVYGRRWLVLLLFSLLAFVQGLVWNTWGPIQNSARQAYGFSSWDIALLVLWGPIGFLPCF 105
Query: 139 LPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVV--GQLICSVAQVFILG 196
WLL+K GLR L S L LG ++ + + ++ GQ++ +A ++
Sbjct: 106 A-FMWLLDKRGLRITVLLTSFLMVLGTGLRCIPISDLILKRRLIHGGQMLNGLAGPTVMN 164
Query: 197 MPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVP----------NIEDRDEL 246
+++ WF A+E +TA ++A + LG A FLV P++VP R +
Sbjct: 165 AAPFLSTTWFSADERATATAIASMLSYLGGACAFLVGPLVVPAPNGTSPLLAAESSRAHI 224
Query: 247 AYHISIMFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGSIARLFK 306
I + Y GV L+ + F +P PP S A S SY S+ RL
Sbjct: 225 KDRIEAVLYAEFGVVCLIFSATLAYFPPRPPLPP------SVAAASQRLSYRRSVCRLLS 278
Query: 307 NLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLGAVISGI 366
N F+++ + Y + G F S +L+ +++ +V+AG IG ++ G + +
Sbjct: 279 NFRFLMIALAYAIPLGVFAGWSGVLD-LILTPAHVSQVDAGWIGFWSIVGGCVVGIAMAR 337
Query: 367 WLDRSK-TYKETTLVVYIMTLVGMVVYTFTL--NLGHLWVVFITAGT----MGFFMTGYL 419
+ D + K L+++ + +T T ++ HL + +T +G F+ +
Sbjct: 338 FADFIRGMLKLILLLLFSGATLSSTWFTLTCLNSITHLPLTTVTLYASCILLGVFLNSSV 397
Query: 420 PLGFEFAVELTYPESEGISSGLLNISAQVF 449
P+ FE VE YP EGI+ G++ + +F
Sbjct: 398 PIFFELFVETVYPVPEGITCGVVTFLSNMF 427
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 43.1 bits (100), Expect = 6e-04
Identities = 15/59 (25%), Positives = 33/59 (55%)
Query: 12 DDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSS 70
D T P+ P+ HP+ + HP+ + +P+ + HP+++ HP+ P+ +P+++
Sbjct: 1258 DPTTTPQPFTTMQPTTMPHPTTTPHPTTTPHPTTTPHPTTTPHPTMTPDPTTTPYPTTT 1316
Score = 43.1 bits (100), Expect = 6e-04
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 14 TPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSGPE 73
T +P P+ + HP+ + HP+ + +P+++ P+++ +P+ P+ HP++ P
Sbjct: 1272 TTMPHPTTTPHPTTTPHPTTTPHPTTTPHPTMTPDPTTTPYPTTTPDPTTTPHPTTPDPS 1331
Query: 74 DLSVI 78
VI
Sbjct: 1332 STPVI 1336
Score = 39.7 bits (91), Expect = 0.007
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 14 TPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPS 68
T + S + DP+ + P ++ P+ +P+ + HP+++ HP+ P+ HP+
Sbjct: 1248 TTITHSTMIPDPTTTPQPFTTMQPTTMPHPTTTPHPTTTPHPTTTPHPTTTPHPT 1302
Score = 38.5 bits (88), Expect = 0.015
Identities = 13/57 (22%), Positives = 31/57 (54%)
Query: 14 TPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSS 70
T +P+ P ++ P+ HP+ + +P+ + HP+++ HP+ P+ P+++
Sbjct: 1254 TMIPDPTTTPQPFTTMQPTTMPHPTTTPHPTTTPHPTTTPHPTTTPHPTMTPDPTTT 1310
Score = 38.1 bits (87), Expect = 0.020
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 2 VNEGPNQEESDDTP----VPESALQADPSVSVHPSVSVHPSV------SINPSVSVHPSS 51
V E + D TP V E + DPS S HP+ + P++ ++NP+V+ H +
Sbjct: 1118 VPESDTTPDLDTTPYSSTVSEYSRSPDPSPSPHPTTTPDPTMAPDPITTLNPTVTPHFPT 1177
Query: 52 SAHPSALAQPSGLAH 66
+ HP+ P+ + H
Sbjct: 1178 TPHPTTTPHPTTITH 1192
Score = 36.6 bits (83), Expect = 0.058
Identities = 15/67 (22%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 12 DDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSG 71
D +P P DP+++ P +++P+V+ + + HP+++ HP+ + + + P+++
Sbjct: 1144 DPSPSPHPTTTPDPTMAPDPITTLNPTVTPHFPTTPHPTTTPHPTTITHSTMIPDPTTT- 1202
Query: 72 PEDLSVI 78
P+ + I
Sbjct: 1203 PQPFTTI 1209
Score = 33.9 bits (76), Expect = 0.38
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 6 PNQEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLA 65
P+ T P ++ P+ + P ++ P+ HP+++ HP+ P+
Sbjct: 1234 PHSTTPHPTTTPHPTTITHSTMIPDPTTTPQPFTTMQPTTMPHPTTTPHPTTTPHPTTTP 1293
Query: 66 HPSSS 70
HP+++
Sbjct: 1294 HPTTT 1298
>gi|5730045 solute carrier family 16, member 2 [Homo sapiens]
Length = 613
Score = 38.5 bits (88), Expect = 0.015
Identities = 64/311 (20%), Positives = 121/311 (38%), Gaps = 25/311 (8%)
Query: 141 VAWLLEKFGLRTIALTGSALNCLGAWVK--LGSLKPHLFPVTVVGQLICSVAQVFILGMP 198
V+ ++ G R A G+A+ +G SL F ++ CS A P
Sbjct: 235 VSIFTDRLGCRITATAGAAVAFIGLHTSSFTSSLSLRYFTYGILFGCGCSFAF-----QP 289
Query: 199 SRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIEDRDELAYHISIMFYIIG 258
S + + + A V G+ + ++ F P L+ + D+ +LA ++
Sbjct: 290 SLVILGHYFQRRLGLANGVVSAGSSI-FSMSF---PFLIRMLGDKIKLAQTFQVL----- 340
Query: 259 GVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGSIARLFKNLNF---VLLVI 315
+T + +L+++ +P P S+ + + +L + + F F +
Sbjct: 341 --STFMFVLMLLSLTYRPLLPSSQDTPSKRGVRTLHQRFLAQLRKYFNMRVFRQRTYRIW 398
Query: 316 TYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGM-LGAVISGIWLDRSKTY 374
+G+ A A ++ M E+ + L + A LG ++SG D
Sbjct: 399 AFGIAAAALGYFVPYVHLMKYVEEEFSEIKETWVLLVCIGATSGLGRLVSGHISDSIPGL 458
Query: 375 KETTLVVYIMTLVGMVVYTFTL--NLGHLWVVFITAGTM-GFFMTGYLPLGFEFAVELTY 431
K+ L V L+G++ L + G L VV + G GFF+T P+ FE +
Sbjct: 459 KKIYLQVLSFLLLGLMSMMIPLCRDFGGLIVVCLFLGLCDGFFITIMAPIAFELVGPMQA 518
Query: 432 PESEGISSGLL 442
++ G G++
Sbjct: 519 SQAIGYLLGMM 529
>gi|148743791 solute carrier family 17 (sodium phosphate), member 3
isoform a [Homo sapiens]
Length = 498
Score = 37.7 bits (86), Expect = 0.026
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 181 VVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNI 240
+V +++ ++Q ILG I W E S CS+A+ G LG L+ +
Sbjct: 169 IVTRIVQGLSQSSILGGQFAIWEKWGPPQERSRLCSIALSGMLLGCFTAILIGGFI---- 224
Query: 241 EDRDELAYHISIMFYIIGGVATLLLILVIIVFKEKP-KYPPSRAQSLSYALTS 292
+ L + +FYI GGV + +L +V + P YP Y ++S
Sbjct: 225 --SETLGW--PFVFYIFGGVGCVCCLLWFVVIYDDPVSYPWISTSEKEYIISS 273
>gi|239750721 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 230
Score = 36.6 bits (83), Expect = 0.058
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 21 LQADPSVSVHPSV--SVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPS 68
L PS+ +HPS+ S+HPS+ + S+H S HPS A HPS
Sbjct: 111 LSMHPSIHIHPSICPSIHPSIHSSIHASIH--LSVHPSFHASIHPCIHPS 158
Score = 31.6 bits (70), Expect = 1.9
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 16/66 (24%)
Query: 28 SVHPSVSVHPSV--SINPSV--------------SVHPSSSAHPSALAQPSGLAHPSSSG 71
S+H S+ +HPS+ SI+PS+ S+HPS HPS H S
Sbjct: 78 SIHASIHLHPSIHPSIHPSIHTYMHTSTYLFIHLSMHPSIHIHPSICPSIHPSIHSSIHA 137
Query: 72 PEDLSV 77
LSV
Sbjct: 138 SIHLSV 143
Score = 30.4 bits (67), Expect = 4.2
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 15 PVPESALQADPSVSVHPS--VSVHPSV--SINPSVSVHPSSSAHPS 56
P S++ A +SVHPS S+HP + S++PS + S HPS
Sbjct: 129 PSIHSSIHASIHLSVHPSFHASIHPCIHPSMHPSTYLFIHPSMHPS 174
Score = 29.6 bits (65), Expect = 7.1
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 14/65 (21%)
Query: 17 PESALQADPSV------SVHPSV--SVHPSV--SINPSV--SVHPSSSAHPSALAQPSGL 64
P L PS+ +HP + S+HPS+ SI+PS+ S+HP HP +
Sbjct: 5 PSIHLSIHPSIYPFIHPCIHPPICSSIHPSIHPSIHPSIHLSIHP--CIHPPICSSIHPS 62
Query: 65 AHPSS 69
HPS+
Sbjct: 63 IHPST 67
Score = 29.6 bits (65), Expect = 7.1
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 29 VHPSV--SVHPSVSINPSVSVHPS--SSAHPSALAQPS 62
+HPS+ S+H S+ ++ S+HPS S H S L+ PS
Sbjct: 192 IHPSLYPSIHASIHLSVHPSIHPSIHPSIHLSFLSYPS 229
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 36.2 bits (82), Expect = 0.076
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 17 PESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSGPEDL 75
P+ A P S PS S PS+S PSVS S ++P+ P PSSS P L
Sbjct: 1043 PKPATSPKPLPSPKPSASPKPSLSAKPSVSTKLISKSNPT----PKPTVSPSSSSPNAL 1097
Score = 32.0 bits (71), Expect = 1.4
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 15 PVPESALQADPSVSVHPSVSVHPSVSINPS--VSVHPSSSAHPSALAQPSGLAHPSSSGP 72
P P+ + PS+S PSVS NP+ +V PSSS+ + +AQ S H S++ P
Sbjct: 1053 PSPKPSASPKPSLSAKPSVSTKLISKSNPTPKPTVSPSSSSPNALVAQGS---HSSTNSP 1109
>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
Length = 2416
Score = 35.4 bits (80), Expect = 0.13
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 4 EGPN-------QEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPS 56
EGP+ EE + VP + + PS PSV PSV + PS PS PS
Sbjct: 773 EGPSATEVPSASEEPSPSEVPFPSEEPSPSEEPFPSVRPFPSVELFPSEEPFPSKEPSPS 832
Query: 57 ALAQPSGLAHPSSSGP 72
+PS P + P
Sbjct: 833 --EEPSASEEPYTPSP 846
Score = 29.3 bits (64), Expect = 9.2
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 9 EESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQ--PSGLAH 66
EE + P +++ PSV + PS PS PS S PS+S P + PS
Sbjct: 797 EEPSPSEEPFPSVRPFPSVELFPSEEPFPSK--EPSPSEEPSASEEPYTPSPPVPSWTEL 854
Query: 67 PSS---SGPEDLS 76
PSS SG D+S
Sbjct: 855 PSSGEESGAPDVS 867
>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
Length = 2317
Score = 35.4 bits (80), Expect = 0.13
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 4 EGPN-------QEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPS 56
EGP+ EE + VP + + PS PSV PSV + PS PS PS
Sbjct: 773 EGPSATEVPSASEEPSPSEVPFPSEEPSPSEEPFPSVRPFPSVELFPSEEPFPSKEPSPS 832
Query: 57 ALAQPSGLAHPSSSGP 72
+PS P + P
Sbjct: 833 --EEPSASEEPYTPSP 846
Score = 29.3 bits (64), Expect = 9.2
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 9 EESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQ--PSGLAH 66
EE + P +++ PSV + PS PS PS S PS+S P + PS
Sbjct: 797 EEPSPSEEPFPSVRPFPSVELFPSEEPFPSK--EPSPSEEPSASEEPYTPSPPVPSWTEL 854
Query: 67 PSS---SGPEDLS 76
PSS SG D+S
Sbjct: 855 PSSGEESGAPDVS 867
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 35.0 bits (79), Expect = 0.17
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 28 SVHPSVS--VHPSVSINPSVSVHPSSSAHPSA--LAQPSGLAHPSSSGP 72
S+HPS +HPS+ + S+HP + +HPS L PS HP + P
Sbjct: 115 SIHPSTHPLIHPSIHPSTHSSIHPPTHSHPSTHPLIHPS--IHPPTHSP 161
Score = 33.9 bits (76), Expect = 0.38
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 14/59 (23%)
Query: 28 SVHPSV------SVHPSV--SINPSV--SVHPS--SSAHPSALAQPS--GLAHPSSSGP 72
S+HPS S+HPS+ S +P + S+HPS SS HP + PS L HPS P
Sbjct: 99 SIHPSTHPPTHSSIHPSIHPSTHPLIHPSIHPSTHSSIHPPTHSHPSTHPLIHPSIHPP 157
Score = 33.5 bits (75), Expect = 0.49
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 28 SVHPSV--SVHPSVSINPSVSVHPS------SSAHPSALAQPSGLAHPS 68
S+HP + S+HPS+ S+HPS SS HPS L HPS
Sbjct: 79 SIHPLIHPSIHPSLHPPTHSSIHPSTHPPTHSSIHPSIHPSTHPLIHPS 127
Score = 32.7 bits (73), Expect = 0.84
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 25 PSVSVHPSVSVHPSVSINPSV--SVHP--SSSAHPSALAQPSGLAHPSSSGPEDLSV 77
PS+ HP + H I+P S+HP S HPS HPS+ P S+
Sbjct: 56 PSIHTHPPIHPHTHPPIHPPTHPSIHPLIHPSIHPSLHPPTHSSIHPSTHPPTHSSI 112
Score = 32.0 bits (71), Expect = 1.4
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 28 SVHPSVS--VHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPS 68
S+HPS+ HPS+ +P + H HP L HPS
Sbjct: 45 SIHPSIHPPTHPSIHTHPPIHPHTHPPIHPPTHPSIHPLIHPS 87
Score = 30.0 bits (66), Expect = 5.4
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 10/64 (15%)
Query: 15 PVPESALQADPSVSVHPSVSVHPSV--SINPSV--SVHPS------SSAHPSALAQPSGL 64
P ++ P + H +HP SI+P + S+HPS SS HPS
Sbjct: 52 PPTHPSIHTHPPIHPHTHPPIHPPTHPSIHPLIHPSIHPSLHPPTHSSIHPSTHPPTHSS 111
Query: 65 AHPS 68
HPS
Sbjct: 112 IHPS 115
Score = 29.6 bits (65), Expect = 7.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 10/51 (19%)
Query: 26 SVSVHPSV------SVHPSV--SINPSVSVHPSSSAHPSALAQPSGLAHPS 68
S S+HPS+ S+HPS+ +PS+ HP H P HPS
Sbjct: 31 SPSIHPSIHPPTHPSIHPSIHPPTHPSIHTHPPIHPHTHPPIHPP--THPS 79
Score = 29.3 bits (64), Expect = 9.2
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 15 PVPESALQADPSVSVHPSVSVHPSVS--INPSVSVHPSSSAHPSALAQPSGLAHPS 68
P+ ++ S+HP HPS I+PS+ S HPS HPS
Sbjct: 122 PLIHPSIHPSTHSSIHPPTHSHPSTHPLIHPSIHPPTHSPIHPSIHPPTHPPTHPS 177
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 35.0 bits (79), Expect = 0.17
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 3 NEGPNQEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPS 62
++ PNQ ++ PVP + +Q P++ S HP P S HP + QPS
Sbjct: 228 SQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP----PHPSPHPPLQPLTGSAGQPS 283
Query: 63 GLAH 66
+H
Sbjct: 284 APSH 287
Score = 35.0 bits (79), Expect = 0.17
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 5 GPNQEESDDTPVPESALQADPSVSVHPSVSVHPS-VSINPSVSVHPSSSAHPSALAQPSG 63
GP+ + P AL+ S+S H S HP + + P PSS A P L Q
Sbjct: 399 GPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQN 458
Query: 64 LAHPSSSGP 72
L P +S P
Sbjct: 459 LPPPPASHP 467
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 35.0 bits (79), Expect = 0.17
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 3 NEGPNQEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPS 62
++ PNQ ++ PVP + +Q P++ S HP P S HP + QPS
Sbjct: 782 SQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP----PHPSPHPPLQPLTGSAGQPS 837
Query: 63 GLAH 66
+H
Sbjct: 838 APSH 841
Score = 35.0 bits (79), Expect = 0.17
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 5 GPNQEESDDTPVPESALQADPSVSVHPSVSVHPS-VSINPSVSVHPSSSAHPSALAQPSG 63
GP+ + P AL+ S+S H S HP + + P PSS A P L Q
Sbjct: 953 GPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQN 1012
Query: 64 LAHPSSSGP 72
L P +S P
Sbjct: 1013 LPPPPASHP 1021
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 35.0 bits (79), Expect = 0.17
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 3 NEGPNQEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPS 62
++ PNQ ++ PVP + +Q P++ S HP P S HP + QPS
Sbjct: 782 SQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP----PHPSPHPPLQPLTGSAGQPS 837
Query: 63 GLAH 66
+H
Sbjct: 838 APSH 841
Score = 35.0 bits (79), Expect = 0.17
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 5 GPNQEESDDTPVPESALQADPSVSVHPSVSVHPS-VSINPSVSVHPSSSAHPSALAQPSG 63
GP+ + P AL+ S+S H S HP + + P PSS A P L Q
Sbjct: 953 GPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQN 1012
Query: 64 LAHPSSSGP 72
L P +S P
Sbjct: 1013 LPPPPASHP 1021
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 34.3 bits (77), Expect = 0.29
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 25 PSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSS 70
P + HP + HP + +P + HP HP P HP S
Sbjct: 7 PHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPMMS 52
Score = 33.9 bits (76), Expect = 0.38
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 17 PESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQP 61
P+ L P + HP + HP + +P + HP HP P
Sbjct: 5 PQPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHP 49
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 34.3 bits (77), Expect = 0.29
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 25 PSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSS 70
P + HP + HP + +P + HP HP P HP S
Sbjct: 7 PHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPMMS 52
Score = 33.9 bits (76), Expect = 0.38
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 17 PESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQP 61
P+ L P + HP + HP + +P + HP HP P
Sbjct: 5 PQPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHP 49
>gi|239749927 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 34.3 bits (77), Expect = 0.29
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 15 PVPESALQADPSVSVHPSV--SVHPSVSINPSVSVHPS----------SSAHPSALAQPS 62
P ++ +S+HP + SVH + ++ +S+HPS SS HPS
Sbjct: 116 PPIHPSIHLSTHLSIHPPIHPSVHSPIHLSTHLSIHPSVHSSIHSSIHSSIHPSTHPSIH 175
Query: 63 GLAHPS---SSGPEDLSVIKVSRRRWAVVLVF 91
L HPS S PE+ +S + + + +F
Sbjct: 176 PLIHPSIHLSIHPENFYEAALSTKSTSRMCIF 207
Score = 30.4 bits (67), Expect = 4.2
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 24 DPSVSVHPSVS--VHPSVSINPSVSVHP---SSSAHPSALAQPSGLAHPSSSGPEDLSV 77
D S+HPS++ +HPS+ + +HP SS HPS PS HPS P S+
Sbjct: 11 DSHPSIHPSINSFIHPSMHPSIHPFIHPPTIHSSTHPS--IHPS--IHPSIHPPTHPSI 65
Score = 29.6 bits (65), Expect = 7.1
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 9/49 (18%)
Query: 28 SVHPSV--SVHPSVSINPSVSVHPS------SSAHPSA-LAQPSGLAHP 67
S HPS+ S+HPS+ S+HPS S HPS L+ + HP
Sbjct: 44 STHPSIHPSIHPSIHPPTHPSIHPSIHPFIHPSIHPSIHLSIHQSIIHP 92
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 34.3 bits (77), Expect = 0.29
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 6 PNQEESDDTPVPESALQADPSVSVHP------SVSVHPSVSINPSVSVHPSSSAHPSALA 59
P E T VP +A + PS S+ P S SV P+ PS SV P+ PS
Sbjct: 142 PTSSEEPSTSVPPTASEV-PSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSV 200
Query: 60 QPSGLAHPSSSGP 72
P+ P +S P
Sbjct: 201 LPTPGEGPGTSVP 213
Score = 32.7 bits (73), Expect = 0.84
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 10 ESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSS 69
E +T P ++ + +PS SV P+ S PS S+ P+ S+S P+A PS P+
Sbjct: 134 EGRNTSRPPTSSE-EPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTP 192
Query: 70 SGPEDLSVI 78
SV+
Sbjct: 193 DEGPSTSVL 201
Score = 31.6 bits (70), Expect = 1.9
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 6 PNQEESDDTPVPESALQADPSVSVHPSVSVHPSVSINP------SVSVHPSSSAHPSALA 59
P ++E T VP + + PS SV P+ S S+S+ P S SV P+++ S
Sbjct: 250 PTRDEGPSTSVPATPGEG-PSTSVLPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSV 308
Query: 60 QPSGLAHPSSSGP 72
QP+ S+S P
Sbjct: 309 QPTAGEGSSTSVP 321
Score = 30.8 bits (68), Expect = 3.2
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 6 PNQEESDDTPVPESALQADPSVSVHP------SVSVHPSVSINPSVSVHPSSSAHPSALA 59
P E T VP + + PS SV P S SV P+ S SV P+ S L
Sbjct: 334 PTATEELSTSVPPTPGEG-PSTSVLPIPGEGLSTSVPPTASDGSDTSVPPTPGEGASTLV 392
Query: 60 QPSGLAHPSSS 70
QP+ P SS
Sbjct: 393 QPTAPDGPGSS 403
Score = 30.4 bits (67), Expect = 4.2
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 8 QEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHP 67
Q SD + PS SV P+ + PS + P++S S+S P+ P P
Sbjct: 47 QGPSDSQILQGLCASEGPSTSVLPTSAEGPSTFVPPTISEASSASGQPTISEGPGTSVLP 106
Query: 68 ------SSSGPEDLS 76
S+SGP +S
Sbjct: 107 TPSEGLSTSGPPTIS 121
Score = 29.3 bits (64), Expect = 9.2
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 2 VNEGPNQEESDDTPVPESALQAD--PSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALA 59
++EGP + P P L P++S SV + S + S P+SS PS
Sbjct: 96 ISEGPG---TSVLPTPSEGLSTSGPPTISKGLCTSVTLAASEGRNTSRPPTSSEEPSTSV 152
Query: 60 QPSGLAHPSSSGP 72
P+ PS+S P
Sbjct: 153 PPTASEVPSTSLP 165
>gi|239755199 PREDICTED: hypothetical protein [Homo sapiens]
Length = 279
Score = 33.9 bits (76), Expect = 0.38
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 4 EGPNQEESDDTPVPESA--LQADPSVSVHPSV--SVHPSVS--INPSV--SVHPS--SSA 53
+ P +EE P P S L + + PS+ S+HPS I+PS+ S+HPS
Sbjct: 20 QSPGREEWRAGPAPVSGEGLLGQGAEGIGPSIHPSIHPSTHPPIHPSIHPSIHPSIHPPV 79
Query: 54 HPSALAQPSGLAHPSSSGPEDLS 76
HPS HPS P LS
Sbjct: 80 HPSIHPPTRPSIHPSIHPPVHLS 102
Score = 30.4 bits (67), Expect = 4.2
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 28 SVHPSV--SVHPSV--SINPSV--SVHPSSSAHPSALAQPSGLAHPSSSGP 72
S+HPS+ S+HP V SI+P S+HP S HP HPS P
Sbjct: 66 SIHPSIHPSIHPPVHPSIHPPTRPSIHP--SIHPPVHLSTHPSTHPSIHPP 114
Score = 30.4 bits (67), Expect = 4.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 28 SVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSS 69
S+HP++ I+PS+ S HPS L HPS+
Sbjct: 175 SIHPTIHPRAHPPIHPSIHSPTHPSIHPSTHPSTHPLTHPST 216
Score = 30.0 bits (66), Expect = 5.4
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 25 PSV--SVHPSV--SVHPSV--SINPSV--SVHPS--SSAHPSALAQPSGLAHPSSSGPED 74
PS+ S+HP V S HPS SI+P + S++PS S HPS HPS P
Sbjct: 89 PSIHPSIHPPVHLSTHPSTHPSIHPPIHPSIYPSIHLSTHPSIHPPIHPFIHPSIHPPTH 148
Query: 75 LSV 77
S+
Sbjct: 149 PSI 151
Score = 29.3 bits (64), Expect = 9.2
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 28 SVHPSV--SVHPSV--SINPSV--SVHPSSSAHPSALAQPSGLAHPSSSGP 72
S++PS+ S HPS+ I+P + S+HP + HPS A L H S+ P
Sbjct: 118 SIYPSIHLSTHPSIHPPIHPFIHPSIHPPT--HPSIHASTHPLIHHPSTHP 166
>gi|239746716 PREDICTED: hypothetical protein XP_002343819 [Homo
sapiens]
Length = 217
Score = 33.9 bits (76), Expect = 0.38
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 15/68 (22%)
Query: 15 PVPESALQADPSVSVHPSV------SVHPSV------SINPSV-SVHPSSSAHPSALAQP 61
P S++ S+HPSV S+HPS SI+PS+ S+HP S HPS
Sbjct: 31 PPTYSSIHPPTYSSIHPSVHPHIHPSIHPSTHPHIHPSIHPSIPSIHP--SIHPSIRPST 88
Query: 62 SGLAHPSS 69
HPS+
Sbjct: 89 YSSIHPST 96
Score = 33.1 bits (74), Expect = 0.64
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 28 SVHPSV-SVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPS 68
S+HPS+ S+HPS I+PS+ SS HPS HPS
Sbjct: 68 SIHPSIPSIHPS--IHPSIRPSTYSSIHPSTHISIHPSIHPS 107
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 15 PVPESALQADPSVSVHPSVSVHPSV--SINPSVSVHPSSSAHPSALAQPSGLAHPS 68
P S++ +S+HP S+HPS+ I+PS + S H S A HPS
Sbjct: 86 PSTYSSIHPSTHISIHP--SIHPSIHLHIHPSTHIFIHPSIHSSIHASTHPHIHPS 139
Score = 30.4 bits (67), Expect = 4.2
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 8/38 (21%)
Query: 25 PSV--SVHPSV------SVHPSVSINPSVSVHPSSSAH 54
PS+ S+HPS+ S+HPS I+ S+HPS H
Sbjct: 74 PSIHPSIHPSIRPSTYSSIHPSTHISIHPSIHPSIHLH 111
Score = 29.6 bits (65), Expect = 7.1
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 12/55 (21%)
Query: 27 VSVHPS--VSVHPSV--SINPSV------SVHPS--SSAHPSALAQPSGLAHPSS 69
+ +HPS + +HPS+ SI+P + S+HP SS HPS HPS+
Sbjct: 7 IFIHPSTHIFIHPSIHPSIHPCIHPPTYSSIHPPTYSSIHPSVHPHIHPSIHPST 61
>gi|148728191 solute carrier family 17 (sodium phosphate), member 3
isoform b [Homo sapiens]
Length = 420
Score = 33.9 bits (76), Expect = 0.38
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
Query: 190 AQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIEDRDELAYH 249
A+ ILG I W E S CS+A+ G LG L+ + + L +
Sbjct: 100 AKSSILGGQFAIWEKWGPPQERSRLCSIALSGMLLGCFTAILIGGFI------SETLGW- 152
Query: 250 ISIMFYIIGGVATLLLILVIIVFKEKP-KYPPSRAQSLSYALTS 292
+FYI GGV + +L +V + P YP Y ++S
Sbjct: 153 -PFVFYIFGGVGCVCCLLWFVVIYDDPVSYPWISTSEKEYIISS 195
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 33.5 bits (75), Expect = 0.49
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 6 PNQEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVS-VHPSSSAHPSALAQPSGL 64
P+ ++ P P+S QA ++ + +P +P+ + ++P HP A PS L
Sbjct: 557 PSSSQTKPAPQPQSKPQAPSTLPTSNPIYPYPDARKHPASNLIYP----HPDARKHPSSL 612
Query: 65 AHPSSSGPEDL 75
H S S P L
Sbjct: 613 GHSSHSPPAAL 623
>gi|63025206 hypothetical protein LOC221061 [Homo sapiens]
Length = 890
Score = 33.1 bits (74), Expect = 0.64
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 223 QLGIAIGFLVPPVLVPNIEDRDELAYHISIMFYIIGGVATLLLILVIIV 271
QLG + + PP+ P + +D YH + I+GG+A +LL+L+ ++
Sbjct: 277 QLGYWVAAMSPPIPGP-VVTQDITTYHTVFLLAILGGMAFILLVLLCLL 324
>gi|117306178 hypothetical protein LOC55731 [Homo sapiens]
Length = 562
Score = 33.1 bits (74), Expect = 0.64
Identities = 16/58 (27%), Positives = 22/58 (37%)
Query: 18 ESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSGPEDL 75
++ A P HP P +P P HP +AQ GL HP + + L
Sbjct: 162 QTLAHAPPQTLQHPQGIPPPQALSHPQSLQQPQGLGHPQPMAQTQGLVHPQALAHQGL 219
Score = 33.1 bits (74), Expect = 0.64
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 11 SDDTPVPESAL-QADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSA--LAQPSGLAHP 67
++ +P+ S L A VS H + PS +NP H +++A P+A + P+G++
Sbjct: 293 ANPSPISRSLLINASTRVSTHSVPTPMPSCVVNPMEHTHAATAALPAAGPVNLPTGISRV 352
Query: 68 SSSGPEDLSVIKVSRRRWA 86
+ P DL + ++ + A
Sbjct: 353 PTGYPSDLKPVTWNQHQLA 371
>gi|117306174 hypothetical protein LOC55731 [Homo sapiens]
Length = 562
Score = 33.1 bits (74), Expect = 0.64
Identities = 16/58 (27%), Positives = 22/58 (37%)
Query: 18 ESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSGPEDL 75
++ A P HP P +P P HP +AQ GL HP + + L
Sbjct: 162 QTLAHAPPQTLQHPQGIPPPQALSHPQSLQQPQGLGHPQPMAQTQGLVHPQALAHQGL 219
Score = 33.1 bits (74), Expect = 0.64
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 11 SDDTPVPESAL-QADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSA--LAQPSGLAHP 67
++ +P+ S L A VS H + PS +NP H +++A P+A + P+G++
Sbjct: 293 ANPSPISRSLLINASTRVSTHSVPTPMPSCVVNPMEHTHAATAALPAAGPVNLPTGISRV 352
Query: 68 SSSGPEDLSVIKVSRRRWA 86
+ P DL + ++ + A
Sbjct: 353 PTGYPSDLKPVTWNQHQLA 371
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 32.7 bits (73), Expect = 0.84
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 6 PNQEESDDTPV-PES-ALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSG 63
P +S P P+S A ADP P+ P P P S A P A A P
Sbjct: 408 PEDPDSGTAPADPDSGAFAADPDSGAAPAAPADPDSGAAPDAPADPDSGAAPDAPADPDA 467
Query: 64 LAHPSS 69
A P +
Sbjct: 468 GAAPEA 473
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 32.7 bits (73), Expect = 0.84
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 30 HPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSGPEDLSVIKVSRRRWAVVL 89
HPS+ H + +PS + S+AH + P A PSS+ P SR+ W V+
Sbjct: 3568 HPSLLPHSACFPDPSTASTSQSAAHSNDSPPPPSAAAPSSASPH------ASRKSWPQVV 3621
>gi|122114658 hypothetical protein LOC23053 [Homo sapiens]
Length = 1842
Score = 32.7 bits (73), Expect = 0.84
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 17 PESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSA-LAQPSGLAHPSSSGPE 73
P L S +HP ++ P + +P HP+ AHP + +P+ PSS+ P+
Sbjct: 1498 PGPGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQ 1555
>gi|27777653 sperm acrosome associated 3 [Homo sapiens]
Length = 215
Score = 32.3 bits (72), Expect = 1.1
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 20/125 (16%)
Query: 19 SALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSGPEDLSVI 78
SAL+ P + VH S PSVS P V SS SAL+Q SG S++G E S
Sbjct: 3 SALRGAPLIRVHSSPVSSPSVS-GPRRLVSCLSS-QSSALSQ-SGGGSTSAAGIEARS-- 57
Query: 79 KVSRRRW--------AVVLVFSCYSMCNSFQWIQYGSINNI-FMHFYGVSAF----AIDW 125
+ RRRW A+V + SC + S + YG +H +G+ + DW
Sbjct: 58 RALRRRWCPAGIMLLALVCLLSC--LLPSSEAKLYGRCELARVLHDFGLDGYRGYSLADW 115
Query: 126 LSMCY 130
+ + Y
Sbjct: 116 VCLAY 120
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,149,945
Number of Sequences: 37866
Number of extensions: 826587
Number of successful extensions: 4358
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 3883
Number of HSP's gapped (non-prelim): 319
length of query: 526
length of database: 18,247,518
effective HSP length: 107
effective length of query: 419
effective length of database: 14,195,856
effective search space: 5948063664
effective search space used: 5948063664
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.