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Search of human proteins with 189409140
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|189409140 telomeric repeat binding factor 1 isoform 2 [Homo
sapiens]
(419 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|189409140 telomeric repeat binding factor 1 isoform 2 [Homo s... 840 0.0
gi|189409142 telomeric repeat binding factor 1 isoform 1 [Homo s... 828 0.0
gi|169212925 PREDICTED: similar to telomeric repeat binding fact... 739 0.0
gi|89044853 PREDICTED: similar to telomeric repeat binding facto... 738 0.0
gi|239747124 PREDICTED: hypothetical protein XP_002343917 [Homo ... 231 1e-60
gi|5032169 telomeric repeat binding factor 2 [Homo sapiens] 95 1e-19
gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Hom... 42 8e-04
gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Hom... 42 8e-04
gi|4505293 MYB-related protein B [Homo sapiens] 41 0.002
gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo sapi... 39 0.009
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 39 0.011
gi|17975763 myelin transcription factor 1 [Homo sapiens] 38 0.015
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 37 0.044
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 37 0.044
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 37 0.044
gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform... 36 0.057
gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform... 36 0.057
gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform... 36 0.057
gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform... 36 0.057
gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform... 36 0.057
gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform ... 36 0.057
gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform... 36 0.057
gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform... 36 0.057
gi|87298939 hypothetical protein LOC131831 [Homo sapiens] 36 0.057
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 36 0.057
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof... 36 0.057
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof... 36 0.057
gi|4504487 histidine rich calcium binding protein precursor [Hom... 36 0.074
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 35 0.097
gi|47578107 delangin isoform B [Homo sapiens] 35 0.097
>gi|189409140 telomeric repeat binding factor 1 isoform 2 [Homo
sapiens]
Length = 419
Score = 840 bits (2170), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE 60
MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE
Sbjct: 1 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE 60
Query: 61 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL 120
EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL
Sbjct: 61 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL 120
Query: 121 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA 180
RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA
Sbjct: 121 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA 180
Query: 181 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI 240
IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI
Sbjct: 181 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI 240
Query: 241 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKN 300
KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKN
Sbjct: 241 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKN 300
Query: 301 LFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKR 360
LFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKR
Sbjct: 301 LFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKR 360
Query: 361 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED 419
QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED
Sbjct: 361 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED 419
>gi|189409142 telomeric repeat binding factor 1 isoform 1 [Homo
sapiens]
Length = 439
Score = 828 bits (2139), Expect = 0.0
Identities = 419/439 (95%), Positives = 419/439 (95%), Gaps = 20/439 (4%)
Query: 1 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE 60
MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE
Sbjct: 1 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE 60
Query: 61 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL 120
EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL
Sbjct: 61 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL 120
Query: 121 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA 180
RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA
Sbjct: 121 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA 180
Query: 181 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI 240
IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI
Sbjct: 181 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI 240
Query: 241 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRK----- 295
KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRK
Sbjct: 241 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKSVSDK 300
Query: 296 ---------------RSHKNLFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATES 340
RSHKNLFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATES
Sbjct: 301 QSAVTESSEGTVSLLRSHKNLFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATES 360
Query: 341 RIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVML 400
RIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVML
Sbjct: 361 RIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVML 420
Query: 401 KDRWRTMKKLKLISSDSED 419
KDRWRTMKKLKLISSDSED
Sbjct: 421 KDRWRTMKKLKLISSDSED 439
>gi|169212925 PREDICTED: similar to telomeric repeat binding factor
(NIMA-interacting) 1 [Homo sapiens]
Length = 405
Score = 739 bits (1909), Expect = 0.0
Identities = 378/406 (93%), Positives = 388/406 (95%), Gaps = 5/406 (1%)
Query: 16 ADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEEEDAGLVAEAEA--V 73
ADGRDADPTEEQMAETERNDEEQFECQE L+CQVQVGAPEEEEE DAGLVAEAEA V
Sbjct: 3 ADGRDADPTEEQMAETERNDEEQFECQERLKCQVQVGAPEEEEE---DAGLVAEAEAEAV 59
Query: 74 AAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQLRTIYICQFLTRIA 133
AAGWML+FLC SLCRAFRDGRSEDF RTRNSAEAIIHGLSSLTA QLRTIYICQFLTRIA
Sbjct: 60 AAGWMLEFLCFSLCRAFRDGRSEDFCRTRNSAEAIIHGLSSLTAYQLRTIYICQFLTRIA 119
Query: 134 AGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEA 193
AGKTLDAQFENDERITPLESAL+IWGSIEK+HDKL EEIQNLIKIQAIAVCMENGNFKEA
Sbjct: 120 AGKTLDAQFENDERITPLESALIIWGSIEKKHDKLQEEIQNLIKIQAIAVCMENGNFKEA 179
Query: 194 EEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSS 253
EEVFER+FGDPNS+MP KSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSS
Sbjct: 180 EEVFERLFGDPNSYMPLKSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSS 239
Query: 254 TFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKNLFLSKLQHGTQQQ 313
TFLMKAAAKVVESKRTRTITSQDK +GN VEMETEA+LDTRKRSHKNLFLSKLQHGTQQQ
Sbjct: 240 TFLMKAAAKVVESKRTRTITSQDKLNGNYVEMETEASLDTRKRSHKNLFLSKLQHGTQQQ 299
Query: 314 DLNKKERRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRS 373
DLNKKERRVGT QSTKKKKESRRATESRIPVSKSQPVTPEKH+ARKRQAWL EEDKNLRS
Sbjct: 300 DLNKKERRVGTLQSTKKKKESRRATESRIPVSKSQPVTPEKHQARKRQAWLQEEDKNLRS 359
Query: 374 GVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED 419
G+RKYGEGNWSKILLHYKFNNRTSV LKDRWRT KKLKLI SDSED
Sbjct: 360 GMRKYGEGNWSKILLHYKFNNRTSVTLKDRWRTTKKLKLICSDSED 405
>gi|89044853 PREDICTED: similar to telomeric repeat binding factor
(NIMA-interacting) 1 [Homo sapiens]
Length = 405
Score = 738 bits (1905), Expect = 0.0
Identities = 378/406 (93%), Positives = 387/406 (95%), Gaps = 5/406 (1%)
Query: 16 ADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEEEDAGLVAEAEA--V 73
ADGRDADPTEEQMAETERNDEEQFECQE L+CQVQVGAPEEEEE DAGLVAEAEA V
Sbjct: 3 ADGRDADPTEEQMAETERNDEEQFECQERLKCQVQVGAPEEEEE---DAGLVAEAEAEAV 59
Query: 74 AAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQLRTIYICQFLTRIA 133
AAGWML+FLC SLCRAF DGRSEDF RTRNSAEAIIHGLSSLTA QLRTIYICQFLTRIA
Sbjct: 60 AAGWMLEFLCFSLCRAFPDGRSEDFCRTRNSAEAIIHGLSSLTAYQLRTIYICQFLTRIA 119
Query: 134 AGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEA 193
AGKTLDAQFENDERITPLESAL+IWGSIEK+HDKL EEIQNLIKIQAIAVCMENGNFKEA
Sbjct: 120 AGKTLDAQFENDERITPLESALIIWGSIEKKHDKLQEEIQNLIKIQAIAVCMENGNFKEA 179
Query: 194 EEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSS 253
EEVFER+FGDPNS+MP KSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSS
Sbjct: 180 EEVFERLFGDPNSYMPLKSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSS 239
Query: 254 TFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKNLFLSKLQHGTQQQ 313
TFLMKAAAKVVESKRTRTITSQDK +GN VEMETEA+LDTRKRSHKNLFLSKLQHGTQQQ
Sbjct: 240 TFLMKAAAKVVESKRTRTITSQDKLNGNYVEMETEASLDTRKRSHKNLFLSKLQHGTQQQ 299
Query: 314 DLNKKERRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRS 373
DLNKKERRVGT QSTKKKKESRRATESRIPVSKSQPVTPEKH+ARKRQAWL EEDKNLRS
Sbjct: 300 DLNKKERRVGTLQSTKKKKESRRATESRIPVSKSQPVTPEKHQARKRQAWLQEEDKNLRS 359
Query: 374 GVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED 419
GVRKYGEGNWSKILLHYKFNNRTSV LKDRWRT KKLKLI SDSED
Sbjct: 360 GVRKYGEGNWSKILLHYKFNNRTSVTLKDRWRTTKKLKLICSDSED 405
>gi|239747124 PREDICTED: hypothetical protein XP_002343917 [Homo
sapiens]
Length = 130
Score = 231 bits (588), Expect = 1e-60
Identities = 119/131 (90%), Positives = 121/131 (92%), Gaps = 3/131 (2%)
Query: 16 ADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEEEDAGLVAEAEAVAA 75
ADGRDADPTEEQMAETERNDEEQFECQE L+CQVQVGAPEEEEE DAGLVA+AEAVAA
Sbjct: 3 ADGRDADPTEEQMAETERNDEEQFECQERLKCQVQVGAPEEEEE---DAGLVAKAEAVAA 59
Query: 76 GWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQLRTIYICQFLTRIAAG 135
GWMLDFL SLCRAFRDGRSEDF R RN AEAIIHGLSSLTA QLRTIYICQFLTRIAAG
Sbjct: 60 GWMLDFLRFSLCRAFRDGRSEDFCRIRNRAEAIIHGLSSLTAYQLRTIYICQFLTRIAAG 119
Query: 136 KTLDAQFENDE 146
KTLDAQFENDE
Sbjct: 120 KTLDAQFENDE 130
>gi|5032169 telomeric repeat binding factor 2 [Homo sapiens]
Length = 500
Score = 94.7 bits (234), Expect = 1e-19
Identities = 64/229 (27%), Positives = 116/229 (50%), Gaps = 7/229 (3%)
Query: 61 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL 120
E AG EAV W+L F RAFR R DFR+ R+ +A++
Sbjct: 40 ERGAGEARLEEAVNR-WVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVS 98
Query: 121 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEH---DKLHEEIQNLIK 177
R + + Q L+RI G+ LD F+ + +TPLESA+ + I+ E + + E + L+K
Sbjct: 99 RLLRVMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSRKLVK 158
Query: 178 IQAIAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMM 237
A+ +C++N F++A ++ ++ + ++ LL II +K+ H Q+FSY
Sbjct: 159 EAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNLAHPVIQNFSYETFQ 218
Query: 238 EKIKSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQD--KPSGNDVE 284
+K+ ++ L + + +L+ A K ++S+ + T ++ +P+ VE
Sbjct: 219 QKMLRFLESHLDD-AEPYLLTMAKKALKSESAASSTGKEDKQPAPGPVE 266
Score = 72.8 bits (177), Expect = 5e-13
Identities = 31/52 (59%), Positives = 42/52 (80%)
Query: 359 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKL 410
K+Q W EE + +++GV+KYGEGNW+ I +Y F NRT+VM+KDRWRTMK+L
Sbjct: 446 KKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRL 497
>gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Homo
sapiens]
Length = 1108
Score = 42.4 bits (98), Expect = 8e-04
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 3 EDVSSAAPSPRGCADGRDA---DPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEE 59
E V + A +G +D R++ + E+ E E D+E E QE EC+ G EEEEE
Sbjct: 993 EHVGARASPSQGDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEE 1052
Query: 60 EEE-DAGLVAEAE 71
EEE + V EAE
Sbjct: 1053 EEEVEEEEVEEAE 1065
>gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Homo
sapiens]
Length = 1124
Score = 42.4 bits (98), Expect = 8e-04
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 3 EDVSSAAPSPRGCADGRDA---DPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEE 59
E V + A +G +D R++ + E+ E E D+E E QE EC+ G EEEEE
Sbjct: 1009 EHVGARASPSQGDSDERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEE 1068
Query: 60 EEE-DAGLVAEAE 71
EEE + V EAE
Sbjct: 1069 EEEVEEEEVEEAE 1081
>gi|4505293 MYB-related protein B [Homo sapiens]
Length = 700
Score = 40.8 bits (94), Expect = 0.002
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 352 PEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 404
PE+ ++ + W EED+ LR+ VR++G+ +W + H F NRT + RW
Sbjct: 23 PEQRDSKCKVKWTHEEDEQLRALVRQFGQQDWKFLASH--FPNRTDQQCQYRW 73
Score = 31.6 bits (70), Expect = 1.4
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 363 WLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 404
W EED+ + V+KYG W+ I H K R ++RW
Sbjct: 86 WTKEEDQKVIELVKKYGTKQWTLIAKHLK--GRLGKQCRERW 125
>gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo
sapiens]
Length = 783
Score = 38.9 bits (89), Expect = 0.009
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 238 EKIKSYVNYVLSEKSSTFLMKA---------AAKVVESKRTRTITSQDKPSGNDVEMETE 288
EK KS ++E+ T KA + + S +++ +++PS ND+ +T+
Sbjct: 34 EKPKSDKTEEIAEEEETVFPKAKQVKKKAEPSEVDMNSPKSKKAKKKEEPSQNDISPKTK 93
Query: 289 ANLDTRKRSHKNLFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATESRIPVSKSQ 348
+ ++ K + SK + T+ ++ +++E P+ KK+KE T + P K+
Sbjct: 94 SLRKKKEPIEKKVVSSKTKKVTKNEEPSEEEIDAPKPKKMKKEKEMNGETREKSPKLKNG 153
Query: 349 PVTPE 353
PE
Sbjct: 154 FPHPE 158
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 38.5 bits (88), Expect = 0.011
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 16 ADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEEEDAGLVAEAEAV 73
A+G++ + EE+ E E DEE+ E +E E + + EEEEEEEE A VA E +
Sbjct: 729 ANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEE----EEEEEEEEAAAAVALGEVL 782
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 38.1 bits (87), Expect = 0.015
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 3 EDVSSAAPSP-RGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEE 61
ED +S S +G + D EE+ E E DEE+ E +E E + + EEEEEEE
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 300
Query: 62 ED 63
E+
Sbjct: 301 EE 302
Score = 33.9 bits (76), Expect = 0.28
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 17 DGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEEEDA 64
+ + + EE+ E E +EE+ E +E E + + EEEEEEEE+A
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEA 307
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 36.6 bits (83), Expect = 0.044
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Query: 267 KRTRTITSQDKPSGNDVEMETEANLDTRKRSHKNLFLSKLQHGTQQQDLNKKERRVGTPQ 326
K+ T +D+ D E E E D R+R + ++ Q T ++ + +RR +
Sbjct: 179 KQKERETERDRDRQRDTEKERERQTD-RERDRQRKTQTERQRETDREGERETDRRRERQR 237
Query: 327 STKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEG 381
+ KE R + + K + +K R K++ EDK RK+GEG
Sbjct: 238 DRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKK-----RKWGEG 287
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 36.6 bits (83), Expect = 0.044
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 265 ESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKNLFLSKLQHGTQQQDLNKKERRVGT 324
E KR ++ S+ K S + + ++R R+ K SK H +Q + ++ RR
Sbjct: 1815 EKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSK-SHRSQTRSRSRSRRR--- 1870
Query: 325 PQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKRQ 361
++ SR + R VSK + KHR++ R+
Sbjct: 1871 ----RRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRE 1903
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 36.6 bits (83), Expect = 0.044
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 265 ESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKNLFLSKLQHGTQQQDLNKKERRVGT 324
E KR ++ S+ K S + + ++R R+ K SK H +Q + ++ RR
Sbjct: 1815 EKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSK-SHRSQTRSRSRSRRR--- 1870
Query: 325 PQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKRQ 361
++ SR + R VSK + KHR++ R+
Sbjct: 1871 ----RRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRE 1903
>gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform 8
[Homo sapiens]
Length = 605
Score = 36.2 bits (82), Expect = 0.057
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 349 PVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 408
P + ++H + R W EED+ L+ V + G +W K++ +Y NRT V + RW+ +
Sbjct: 31 PKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW-KVIANY-LPNRTDVQCQHRWQKVL 86
Query: 409 KLKLI 413
+LI
Sbjct: 87 NPELI 91
Score = 32.3 bits (72), Expect = 0.82
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 363 WLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 404
W EED+ + V+KYG WS I H K R ++RW
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLK--GRIGKQCRERW 134
>gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform 7
[Homo sapiens]
Length = 603
Score = 36.2 bits (82), Expect = 0.057
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 349 PVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 408
P + ++H + R W EED+ L+ V + G +W K++ +Y NRT V + RW+ +
Sbjct: 31 PKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW-KVIANY-LPNRTDVQCQHRWQKVL 86
Query: 409 KLKLI 413
+LI
Sbjct: 87 NPELI 91
Score = 32.3 bits (72), Expect = 0.82
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 363 WLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 404
W EED+ + V+KYG WS I H K R ++RW
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLK--GRIGKQCRERW 134
>gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform 6
[Homo sapiens]
Length = 745
Score = 36.2 bits (82), Expect = 0.057
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 349 PVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 408
P + ++H + R W EED+ L+ V + G +W K++ +Y NRT V + RW+ +
Sbjct: 31 PKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW-KVIANY-LPNRTDVQCQHRWQKVL 86
Query: 409 KLKLI 413
+LI
Sbjct: 87 NPELI 91
Score = 32.3 bits (72), Expect = 0.82
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 363 WLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 404
W EED+ + V+KYG WS I H K R ++RW
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLK--GRIGKQCRERW 134
>gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform 5
[Homo sapiens]
Length = 555
Score = 36.2 bits (82), Expect = 0.057
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 349 PVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 408
P + ++H + R W EED+ L+ V + G +W K++ +Y NRT V + RW+ +
Sbjct: 31 PKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW-KVIANY-LPNRTDVQCQHRWQKVL 86
Query: 409 KLKLI 413
+LI
Sbjct: 87 NPELI 91
Score = 32.3 bits (72), Expect = 0.82
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 363 WLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 404
W EED+ + V+KYG WS I H K R ++RW
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLK--GRIGKQCRERW 134
>gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform 4
[Homo sapiens]
Length = 758
Score = 36.2 bits (82), Expect = 0.057
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 349 PVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 408
P + ++H + R W EED+ L+ V + G +W K++ +Y NRT V + RW+ +
Sbjct: 31 PKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW-KVIANY-LPNRTDVQCQHRWQKVL 86
Query: 409 KLKLI 413
+LI
Sbjct: 87 NPELI 91
Score = 32.3 bits (72), Expect = 0.82
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 363 WLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 404
W EED+ + V+KYG WS I H K R ++RW
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLK--GRIGKQCRERW 134
>gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform 2
[Homo sapiens]
Length = 640
Score = 36.2 bits (82), Expect = 0.057
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 349 PVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 408
P + ++H + R W EED+ L+ V + G +W K++ +Y NRT V + RW+ +
Sbjct: 31 PKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW-KVIANY-LPNRTDVQCQHRWQKVL 86
Query: 409 KLKLI 413
+LI
Sbjct: 87 NPELI 91
Score = 32.3 bits (72), Expect = 0.82
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 363 WLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 404
W EED+ + V+KYG WS I H K R ++RW
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLK--GRIGKQCRERW 134
>gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform 1
[Homo sapiens]
Length = 761
Score = 36.2 bits (82), Expect = 0.057
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 349 PVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 408
P + ++H + R W EED+ L+ V + G +W K++ +Y NRT V + RW+ +
Sbjct: 31 PKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW-KVIANY-LPNRTDVQCQHRWQKVL 86
Query: 409 KLKLI 413
+LI
Sbjct: 87 NPELI 91
Score = 32.3 bits (72), Expect = 0.82
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 363 WLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 404
W EED+ + V+KYG WS I H K R ++RW
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLK--GRIGKQCRERW 134
>gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform 3
[Homo sapiens]
Length = 637
Score = 36.2 bits (82), Expect = 0.057
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 349 PVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 408
P + ++H + R W EED+ L+ V + G +W K++ +Y NRT V + RW+ +
Sbjct: 31 PKSGKRHLGKTR--WTREEDEKLKKLVEQNGTDDW-KVIANY-LPNRTDVQCQHRWQKVL 86
Query: 409 KLKLI 413
+LI
Sbjct: 87 NPELI 91
Score = 32.3 bits (72), Expect = 0.82
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 363 WLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 404
W EED+ + V+KYG WS I H K R ++RW
Sbjct: 95 WTKEEDQRVIELVQKYGPKRWSVIAKHLK--GRIGKQCRERW 134
>gi|87298939 hypothetical protein LOC131831 [Homo sapiens]
Length = 663
Score = 36.2 bits (82), Expect = 0.057
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 9 APSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEEEDAGLVA 68
+PS G +D +EE++ E E +E + E +E+ E + +V EEE EEE G
Sbjct: 6 SPSGFGDPGKKDQKESEEELEEEEEEEEVEEEEEEVEEEEEEVEEEEEEVVEEELVGEEQ 65
Query: 69 EAEA 72
E EA
Sbjct: 66 ELEA 69
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform
3 [Homo sapiens]
Length = 2059
Score = 36.2 bits (82), Expect = 0.057
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 19 RDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEEEDAGLV 67
RD + EE+M +E +EE+ E E E + +V A +E++EE++D G++
Sbjct: 6 RDEEEEEEEMVVSEEEEEEEEEGDE--EEEEEVEAADEDDEEDDDEGVL 52
>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
1 [Homo sapiens]
Length = 1722
Score = 36.2 bits (82), Expect = 0.057
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 264 VESKRTRTITSQDKPSGNDVEMETEANLDTRKRSH----KNLFLSKLQHGTQQQDLNKKE 319
VE K+ I Q++ ND + E + + H +NL L + T+ +D +KE
Sbjct: 216 VEKKKLENIQKQEQDKMNDELYKEEKIWKEKFKQHEEYIRNLHLQMEEERTRFKDQQEKE 275
Query: 320 RRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEE 367
+ Q + + ++ + K P+ E+ ++KR+A W+E
Sbjct: 276 KNSLLKQQNNAAVKIQAKYKAFVAYQKYGPIIKEQIESKKRKAQEWKE 323
>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
2 [Homo sapiens]
Length = 1336
Score = 36.2 bits (82), Expect = 0.057
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 264 VESKRTRTITSQDKPSGNDVEMETEANLDTRKRSH----KNLFLSKLQHGTQQQDLNKKE 319
VE K+ I Q++ ND + E + + H +NL L + T+ +D +KE
Sbjct: 216 VEKKKLENIQKQEQDKMNDELYKEEKIWKEKFKQHEEYIRNLHLQMEEERTRFKDQQEKE 275
Query: 320 RRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEE 367
+ Q + + ++ + K P+ E+ ++KR+A W+E
Sbjct: 276 KNSLLKQQNNAAVKIQAKYKAFVAYQKYGPIIKEQIESKKRKAQEWKE 323
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 35.8 bits (81), Expect = 0.074
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 17 DGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAP------EEEEEEEE 62
+G +E+ E ++ +EE+ E +E E + +VGAP EEEEEEEE
Sbjct: 524 EGHGLSLNQEEEEEEDKEEEEEEEDEERREERAEVGAPLSPDHSEEEEEEEE 575
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 35.4 bits (80), Expect = 0.097
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 17 DGRDADPTEEQMAETERNDEEQFECQ-ELLECQVQVGAPEEEEEEEEDAGLVAEAEAVAA 75
D + + EE+ E E +EE+FE + E E +++ EE+EEEEE+ V + E A
Sbjct: 909 DFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTA 968
Query: 76 G 76
G
Sbjct: 969 G 969
Score = 30.0 bits (66), Expect = 4.1
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 20 DADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE------EEDAGLVAEAE 71
+ + EE+ E E +EE FE +E E + + EEEEEE EE+ G + E E
Sbjct: 891 EEEEEEEEEEEEEEEEEEDFEEEE--EDEEEYFEEEEEEEEEFEEEFEEEEGELEEEE 946
Score = 28.9 bits (63), Expect = 9.1
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 21 ADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEEEDAGLVAEAE 71
+D EE+ E E +EE+ E +E E + + EEEEEE+ E E
Sbjct: 886 SDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFE 936
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 35.4 bits (80), Expect = 0.097
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 232 SYNHMMEKIKSYVNYVLSEKSSTFLMKA-AAKVVESKRTRTITSQDKPSGNDVEMETEAN 290
S N + K+++ + +S T K + +VE K+ S KP+ N
Sbjct: 636 SENKLETKVETQTEELKQNESRTTECKQNESTIVEPKQNENRLSDTKPNDNKQNNGRSET 695
Query: 291 LDTRKRSHKNLFLSKLQHGTQQQDLNK---KERRVGTPQSTKKKKESRRATESRIPVSKS 347
+R + K S+ + Q+ D + K++ G P++ K+K ESR T + ++
Sbjct: 696 TKSRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRPETPKQKGESRPETPKQ--KNEG 753
Query: 348 QPVTPEKHRARKRQ 361
+P TP KHR R+
Sbjct: 754 RPETP-KHRHDNRR 766
Score = 29.3 bits (64), Expect = 7.0
Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 20/123 (16%)
Query: 250 EKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKNLFLSKLQHG 309
E S + + ++ +++ ESK + K S N +E + E + K++ K
Sbjct: 607 ELSKSEMKQSESRLAESKPNENRLVETKSSENKLETKVETQTEELKQNESRTTECKQNES 666
Query: 310 T------------------QQQDLNKKERRVGTPQSTKKKKESRRATESRIPVSKSQPVT 351
T +Q+ + E P++ K+K ESR T + S P T
Sbjct: 667 TIVEPKQNENRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQ--KSDGHPET 724
Query: 352 PEK 354
P++
Sbjct: 725 PKQ 727
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,943,407
Number of Sequences: 37866
Number of extensions: 740795
Number of successful extensions: 7625
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 6054
Number of HSP's gapped (non-prelim): 1159
length of query: 419
length of database: 18,247,518
effective HSP length: 105
effective length of query: 314
effective length of database: 14,271,588
effective search space: 4481278632
effective search space used: 4481278632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.