LOC646359 8819

Name: LOC646359	Sequence: fasta or formatted (405aa)		NCBI GI: 169212925
Description: PREDICTED: similar to telomeric repeat binding factor (NIMA-interacting) 1		Referenced in: Telomere Functions
Other entries for this name: alt prot [405aa] PREDICTED: similar to telomeric repeat binding factor (NIMA-inter...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 29 3 C cysteine 2.0 8 1 D aspartate 4.7 19 1 E glutamate 10.9 44 5 F phenylalanine 4.2 17 2 G glycine 4.0 16 1 H histidine 2.2 9 1 I isoleucine 4.9 20 2 K lysine 9.1 37 4 L leucine 8.4 34 2 M methionine 2.7 11 2 N asparagine 4.2 17 2 P proline 2.2 9 1 Q glutamine 5.7 23 3 R arginine 6.9 28 2 S serine 7.7 31 2 T threonine 5.9 24 2 V valine 3.7 15 2 W tryptophan 1.2 5 1 Y tyrosine 2.2 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to telomeric repeat binding fact... LOC646359 0.995 PREDICTED: similar to telomeric repeat binding facto... TERF1 0.911 telomeric repeat binding factor 1 isoform 2 TERF1 0.897 telomeric repeat binding factor 1 isoform 1 LOC100289185 0.286 PREDICTED: hypothetical protein XP_002343917 TERF2 0.088 telomeric repeat binding factor 2 MYBL2 0.020 MYB-related protein B ATRX 0.015 transcriptional regulator ATRX isoform 2 ATRX 0.015 transcriptional regulator ATRX isoform 1 LOC100133758 0.015 PREDICTED: hypothetical protein, partial SMC6 0.014 SMC6 protein SMC6 0.014 SMC6 protein MYB 0.014 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.014 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.014 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.014 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.014 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.014 v-myb myeloblastosis viral oncogene homolog isoform ... MYB 0.014 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.014 v-myb myeloblastosis viral oncogene homolog isoform... GOLGB1 0.013 golgi autoantigen, golgin subfamily b, macrogolgin ... HRC 0.013 histidine rich calcium binding protein precursor [Hom... LOC100133599 0.011 PREDICTED: hypothetical protein LOC100286959 0.011 PREDICTED: hypothetical protein XP_002343921 ZEB1 0.011 zinc finger E-box binding homeobox 1 isoform a [Hom... ZEB1 0.011 zinc finger E-box binding homeobox 1 isoform b [Hom... TTBK1 0.011 tau tubulin kinase 1 BAI1 0.011 brain-specific angiogenesis inhibitor 1 precursor [... HERC1 0.011 guanine nucleotide exchange factor p532 CHD1 0.011 chromodomain helicase DNA binding protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.