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Search of human proteins with 188595677
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|188595677 integrin, beta 2 precursor [Homo sapiens]
(769 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|188595677 integrin, beta 2 precursor [Homo sapiens] 1624 0.0
gi|89191865 integrin, beta 2 precursor [Homo sapiens] 1624 0.0
gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens] 730 0.0
gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens] 730 0.0
gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens] 719 0.0
gi|4504777 integrin, beta 7 [Homo sapiens] 717 0.0
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] 708 0.0
gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens] 708 0.0
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] 708 0.0
gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens] 576 e-164
gi|9625002 integrin, beta 6 [Homo sapiens] 555 e-158
gi|20127446 integrin, beta 5 [Homo sapiens] 532 e-151
gi|4504779 integrin, beta 8 precursor [Homo sapiens] 432 e-121
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 394 e-109
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] 394 e-109
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] 394 e-109
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ... 132 2e-30
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 88 3e-17
gi|153946395 tenascin C precursor [Homo sapiens] 86 1e-16
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens] 82 2e-15
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens] 82 2e-15
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens] 82 2e-15
gi|111125011 WNT inhibitory factor 1 precursor [Homo sapiens] 74 4e-13
gi|157384973 tenascin R [Homo sapiens] 74 5e-13
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens] 74 7e-13
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 71 3e-12
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 71 3e-12
gi|181336739 multiple EGF-like-domains 11 [Homo sapiens] 70 6e-12
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 69 2e-11
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 67 6e-11
>gi|188595677 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 1624 bits (4206), Expect = 0.0
Identities = 769/769 (100%), Positives = 769/769 (100%)
Query: 1 MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSI 60
MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSI
Sbjct: 1 MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSI 60
Query: 61 RCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQKQLSPQKVTLYLRPGQAAAFNVTFR 120
RCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQKQLSPQKVTLYLRPGQAAAFNVTFR
Sbjct: 61 RCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQKQLSPQKVTLYLRPGQAAAFNVTFR 120
Query: 121 RAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFV 180
RAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFV
Sbjct: 121 RAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFV 180
Query: 181 NTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAM 240
NTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAM
Sbjct: 181 NTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAM 240
Query: 241 MQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFD 300
MQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFD
Sbjct: 241 MQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFD 300
Query: 301 YPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAY 360
YPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAY
Sbjct: 301 YPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAY 360
Query: 361 NKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATEC 420
NKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATEC
Sbjct: 361 NKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATEC 420
Query: 421 IQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKN 480
IQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKN
Sbjct: 421 IQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKN 480
Query: 481 CECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTIN 540
CECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTIN
Sbjct: 481 CECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTIN 540
Query: 541 CERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNV 600
CERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNV
Sbjct: 541 CERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNV 600
Query: 601 CECHSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGR 660
CECHSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGR
Sbjct: 601 CECHSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGR 660
Query: 661 TCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLL 720
TCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLL
Sbjct: 661 TCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLL 720
Query: 721 VIWKALIHLSDLREYRRFEKEKLKSQWNNDNPLFKSATTTVMNPKFAES 769
VIWKALIHLSDLREYRRFEKEKLKSQWNNDNPLFKSATTTVMNPKFAES
Sbjct: 721 VIWKALIHLSDLREYRRFEKEKLKSQWNNDNPLFKSATTTVMNPKFAES 769
>gi|89191865 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 1624 bits (4206), Expect = 0.0
Identities = 769/769 (100%), Positives = 769/769 (100%)
Query: 1 MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSI 60
MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSI
Sbjct: 1 MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSI 60
Query: 61 RCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQKQLSPQKVTLYLRPGQAAAFNVTFR 120
RCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQKQLSPQKVTLYLRPGQAAAFNVTFR
Sbjct: 61 RCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQKQLSPQKVTLYLRPGQAAAFNVTFR 120
Query: 121 RAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFV 180
RAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFV
Sbjct: 121 RAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFV 180
Query: 181 NTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAM 240
NTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAM
Sbjct: 181 NTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAM 240
Query: 241 MQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFD 300
MQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFD
Sbjct: 241 MQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFD 300
Query: 301 YPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAY 360
YPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAY
Sbjct: 301 YPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAY 360
Query: 361 NKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATEC 420
NKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATEC
Sbjct: 361 NKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATEC 420
Query: 421 IQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKN 480
IQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKN
Sbjct: 421 IQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKN 480
Query: 481 CECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTIN 540
CECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTIN
Sbjct: 481 CECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTIN 540
Query: 541 CERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNV 600
CERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNV
Sbjct: 541 CERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNV 600
Query: 601 CECHSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGR 660
CECHSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGR
Sbjct: 601 CECHSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGR 660
Query: 661 TCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLL 720
TCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLL
Sbjct: 661 TCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLL 720
Query: 721 VIWKALIHLSDLREYRRFEKEKLKSQWNNDNPLFKSATTTVMNPKFAES 769
VIWKALIHLSDLREYRRFEKEKLKSQWNNDNPLFKSATTTVMNPKFAES
Sbjct: 721 VIWKALIHLSDLREYRRFEKEKLKSQWNNDNPLFKSATTTVMNPKFAES 769
>gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 730 bits (1884), Expect = 0.0
Identities = 363/791 (45%), Positives = 491/791 (62%), Gaps = 40/791 (5%)
Query: 12 VGLLS-LGCVLSQ----ECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRP 66
+GL+S + CV +Q C K SC ECI++GP C WC F G P S RCD
Sbjct: 9 IGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLE 68
Query: 67 QLLMRGCAADDIMDPTSLAETQEDHNGGQK--------------QLSPQKVTLYLRPGQA 112
L +GC DDI +P + +++ N + Q+ PQ++ L LR G+
Sbjct: 69 ALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEP 128
Query: 113 AAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFV 172
F + F+RA+ YPIDLYYLMDLSYSM DDL NVK LG DL+ + IT RIGFGSFV
Sbjct: 129 QTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFV 188
Query: 173 DKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDA 232
+KTV+P+++T P KLRNPC + E+ C PF++++VL LTN F VGKQ ISGNLD+
Sbjct: 189 EKTVMPYISTTPAKLRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDS 247
Query: 233 PEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNL 292
PEGG DA+MQVA C IGWRNVTRLLVF+TD GFHFAGDGKLG I+ PNDG+CHLE+N+
Sbjct: 248 PEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNM 307
Query: 293 YKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNV 352
Y S+ +DYPS+ L KL+ENNIQ IFAVT Y++L +IPKSAVG LS +SSNV
Sbjct: 308 YTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNV 367
Query: 353 VQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQ 412
+QLI +AYN LSS V L++ L + + ++Y S+C NGV + C + I + F+
Sbjct: 368 IQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFE 427
Query: 413 VKVTATECIQE--QSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS-LCH-GKGFLECG 468
+ +T+ +C ++ SF IR LGFT+ V V + CEC C+ + S CH G G ECG
Sbjct: 428 ISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECG 487
Query: 469 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKL 528
CRC+ G +G++CEC T +S++++ CRK+N+S ICS G+CVCGQC+C D ++
Sbjct: 488 ACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEI 547
Query: 529 IYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRV 588
G++CECD NC+R NG +CG G G+C C C C+P + GSAC C T C
Sbjct: 548 YSGKFCECDNFNCDRSNGLICG--GNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQ 605
Query: 589 ECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC 647
C+GRG C C VC+C +Q C+ C C C ++ C +C F KG C+ C
Sbjct: 606 ICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQEC 665
Query: 648 PGLQLSN-----------NPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECV 696
++ P CKE+D + CW +T +G + +++V E+ EC
Sbjct: 666 SYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTY-SVNGNNEVMVHVVENPECP 724
Query: 697 AGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFK 755
GP+I IV G VAGIVLIG+ LL+IWK L+ + D RE+ +FEKEK+ ++W+ +NP++K
Sbjct: 725 TGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYK 784
Query: 756 SATTTVMNPKF 766
SA TTV+NPK+
Sbjct: 785 SAVTTVVNPKY 795
>gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 730 bits (1884), Expect = 0.0
Identities = 363/791 (45%), Positives = 491/791 (62%), Gaps = 40/791 (5%)
Query: 12 VGLLS-LGCVLSQ----ECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRP 66
+GL+S + CV +Q C K SC ECI++GP C WC F G P S RCD
Sbjct: 9 IGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLE 68
Query: 67 QLLMRGCAADDIMDPTSLAETQEDHNGGQK--------------QLSPQKVTLYLRPGQA 112
L +GC DDI +P + +++ N + Q+ PQ++ L LR G+
Sbjct: 69 ALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEP 128
Query: 113 AAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFV 172
F + F+RA+ YPIDLYYLMDLSYSM DDL NVK LG DL+ + IT RIGFGSFV
Sbjct: 129 QTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFV 188
Query: 173 DKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDA 232
+KTV+P+++T P KLRNPC + E+ C PF++++VL LTN F VGKQ ISGNLD+
Sbjct: 189 EKTVMPYISTTPAKLRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDS 247
Query: 233 PEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNL 292
PEGG DA+MQVA C IGWRNVTRLLVF+TD GFHFAGDGKLG I+ PNDG+CHLE+N+
Sbjct: 248 PEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNM 307
Query: 293 YKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNV 352
Y S+ +DYPS+ L KL+ENNIQ IFAVT Y++L +IPKSAVG LS +SSNV
Sbjct: 308 YTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNV 367
Query: 353 VQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQ 412
+QLI +AYN LSS V L++ L + + ++Y S+C NGV + C + I + F+
Sbjct: 368 IQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFE 427
Query: 413 VKVTATECIQE--QSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS-LCH-GKGFLECG 468
+ +T+ +C ++ SF IR LGFT+ V V + CEC C+ + S CH G G ECG
Sbjct: 428 ISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECG 487
Query: 469 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKL 528
CRC+ G +G++CEC T +S++++ CRK+N+S ICS G+CVCGQC+C D ++
Sbjct: 488 ACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEI 547
Query: 529 IYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRV 588
G++CECD NC+R NG +CG G G+C C C C+P + GSAC C T C
Sbjct: 548 YSGKFCECDNFNCDRSNGLICG--GNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQ 605
Query: 589 ECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC 647
C+GRG C C VC+C +Q C+ C C C ++ C +C F KG C+ C
Sbjct: 606 ICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQEC 665
Query: 648 PGLQLSN-----------NPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECV 696
++ P CKE+D + CW +T +G + +++V E+ EC
Sbjct: 666 SYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTY-SVNGNNEVMVHVVENPECP 724
Query: 697 AGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFK 755
GP+I IV G VAGIVLIG+ LL+IWK L+ + D RE+ +FEKEK+ ++W+ +NP++K
Sbjct: 725 TGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYK 784
Query: 756 SATTTVMNPKF 766
SA TTV+NPK+
Sbjct: 785 SAVTTVVNPKY 795
>gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens]
Length = 801
Score = 719 bits (1856), Expect = 0.0
Identities = 358/791 (45%), Positives = 485/791 (61%), Gaps = 40/791 (5%)
Query: 12 VGLLS-LGCVLSQ----ECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRP 66
+GL+S + CV +Q C K SC ECI++GP C WC F G P S RCD
Sbjct: 9 IGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLE 68
Query: 67 QLLMRGCAADDIMDPTSLAETQEDHNGGQK--------------QLSPQKVTLYLRPGQA 112
L +GC DDI +P + +++ N + Q+ PQ++ L LR G+
Sbjct: 69 ALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEP 128
Query: 113 AAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFV 172
F + F+RA+ YPIDLYYLMDLSYSM DDL NVK LG DL+ + IT RIGFGSFV
Sbjct: 129 QTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFV 188
Query: 173 DKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDA 232
+KTV+P+++T P KLRNPC + E+ C PF++++VL LTN F VGKQ ISGNLD+
Sbjct: 189 EKTVMPYISTTPAKLRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDS 247
Query: 233 PEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNL 292
PEGG DA+MQVA C IGWRNVTRLLVF+TD GFHFAGDGKLG I+ PNDG+CHLE+N+
Sbjct: 248 PEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNM 307
Query: 293 YKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNV 352
Y S+ +DYPS+ L KL+ENNIQ IFAVT Y++L +IPKSAVG LS +SSNV
Sbjct: 308 YTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNV 367
Query: 353 VQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQ 412
+QLI +AYN LSS V L++ L + + ++Y S+C NGV + C + I + F+
Sbjct: 368 IQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFE 427
Query: 413 VKVTATECIQE--QSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS-LCH-GKGFLECG 468
+ +T+ +C ++ SF IR LGFT+ V V + CEC C+ + S CH G G ECG
Sbjct: 428 ISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECG 487
Query: 469 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKL 528
CRC+ G +G++CEC T +S++++ CRK+N+S ICS G+CVCGQC+C D ++
Sbjct: 488 ACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEI 547
Query: 529 IYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRV 588
G++CECD NC+R NG +CG G G+C C C C+P + GSAC C T C
Sbjct: 548 YSGKFCECDNFNCDRSNGLICG--GNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQ 605
Query: 589 ECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC 647
C+GRG C C VC+C +Q C+ C C C ++ C +C F KG C+ C
Sbjct: 606 ICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQEC 665
Query: 648 PGLQLSN-----------NPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECV 696
++ P CKE+D + CW +T +G + +++V E+ EC
Sbjct: 666 SYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTY-SVNGNNEVMVHVVENPECP 724
Query: 697 AGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFK 755
GP+I IV G VAGIVLIG+ LL+IWK L+ + D RE+ +FEKEK+ ++W+ +NP++K
Sbjct: 725 TGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIYK 784
Query: 756 SATTTVMNPKF 766
S NP +
Sbjct: 785 SPINNFKNPNY 795
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 717 bits (1852), Expect = 0.0
Identities = 363/755 (48%), Positives = 481/755 (63%), Gaps = 28/755 (3%)
Query: 32 SCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSLAETQEDH 91
SC++CI S P C WC++LNFT G+ ++ RC R +LL RGC +++ +P E +D
Sbjct: 50 SCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQDQ 109
Query: 92 -------NGGQKQLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLR 144
G QL+PQ+V + LRPG+ V F RA+GYP+DLYYLMDLSYSM DDL
Sbjct: 110 PLSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLE 169
Query: 145 NVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAF 204
V++LG LL L E+T S RIGFGSFVDKTVLPFV+T P KLR+PCP + + CQ PF+F
Sbjct: 170 RVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPFSF 229
Query: 205 RHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRNVTRLLVFATD 264
HVL LT ++ F+ EVG+Q +SGNLD+PEGG DA++Q A C E+IGWRNV+RLLVF +D
Sbjct: 230 HHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSD 289
Query: 265 DGFHFAGDGKLGAILTPNDGRCHLEDN-LYKRSNEFDYPSVGQLAHKLAENNIQPIFAVT 323
D FH AGDGKLG I P+DG CHL+ N LY RS EFDYPSVGQ+A L+ NIQPIFAVT
Sbjct: 290 DTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPIFAVT 349
Query: 324 SRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTYD 383
S + Y++L+++IPKSAVGELSEDSSNVVQLI +AYN LSS V L+H++LP + ++Y+
Sbjct: 350 SAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVHISYE 409
Query: 384 SFCSNGVTH--RNQPRGDCDGVQINVPITFQVKVTATECIQEQSFV-IRALGFTDIVTVQ 440
S C + + RG C+ V+IN +TF V + AT C+ E + +RALGF++ + V+
Sbjct: 410 SQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHLLRLRALGFSEELIVE 469
Query: 441 VLPQCECRCRDQSRDRSLC-HGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRK 499
+ C+C C D C G+G L+CG+C C G +G+ CEC SS +LE CR
Sbjct: 470 LHTLCDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRA 529
Query: 500 DNNS-IICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCF 558
N + +CSG G C CG+C C G CECD +CER+ G +CGG GR C
Sbjct: 530 PNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGILCGGFGR--CQ 581
Query: 559 CGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGC 618
CG C CH G AC+C + C++P CSG GRC+CN C+C GY LC +CPGC
Sbjct: 582 CGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGC 641
Query: 619 PSPCGKYISCAECLKFEKGPFGKNCSAAC--PGLQLSNNPV-KGRTCKERDSEGCWVAYT 675
+PC ++ CAEC F GP NCS AC + L+ P+ CKER + + +
Sbjct: 642 KTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALAPILDDGWCKERTLDN-QLFFF 700
Query: 676 LEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREY 735
L + D ++ V + + AIV G V GIV +G+ L++ ++ + + D REY
Sbjct: 701 LVEDDARGTVVLRVRPQEK--GADHTQAIVLGCVGGIVAVGLGLVLAYRLSVEIYDRREY 758
Query: 736 RRFEKEKLKSQWNND-NPLFKSATTTVMNPKFAES 769
RFEKE+ + W D NPL+KSA TT +NP+F E+
Sbjct: 759 SRFEKEQQQLNWKQDSNPLYKSAITTTINPRFQEA 793
>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
Length = 825
Score = 708 bits (1827), Expect = 0.0
Identities = 352/772 (45%), Positives = 475/772 (61%), Gaps = 39/772 (5%)
Query: 12 VGLLS-LGCVLSQ----ECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRP 66
+GL+S + CV +Q C K SC ECI++GP C WC F G P S RCD
Sbjct: 9 IGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLE 68
Query: 67 QLLMRGCAADDIMDPTSLAETQEDHNGGQK--------------QLSPQKVTLYLRPGQA 112
L +GC DDI +P + +++ N + Q+ PQ++ L LR G+
Sbjct: 69 ALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEP 128
Query: 113 AAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFV 172
F + F+RA+ YPIDLYYLMDLSYSM DDL NVK LG DL+ + IT RIGFGSFV
Sbjct: 129 QTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFV 188
Query: 173 DKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDA 232
+KTV+P+++T P KLRNPC + E+ C PF++++VL LTN F VGKQ ISGNLD+
Sbjct: 189 EKTVMPYISTTPAKLRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDS 247
Query: 233 PEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNL 292
PEGG DA+MQVA C IGWRNVTRLLVF+TD GFHFAGDGKLG I+ PNDG+CHLE+N+
Sbjct: 248 PEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNM 307
Query: 293 YKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNV 352
Y S+ +DYPS+ L KL+ENNIQ IFAVT Y++L +IPKSAVG LS +SSNV
Sbjct: 308 YTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNV 367
Query: 353 VQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQ 412
+QLI +AYN LSS V L++ L + + ++Y S+C NGV + C + I + F+
Sbjct: 368 IQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFE 427
Query: 413 VKVTATECIQE--QSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS-LCH-GKGFLECG 468
+ +T+ +C ++ SF IR LGFT+ V V + CEC C+ + S CH G G ECG
Sbjct: 428 ISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECG 487
Query: 469 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKL 528
CRC+ G +G++CEC T +S++++ CRK+N+S ICS G+CVCGQC+C D ++
Sbjct: 488 ACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEI 547
Query: 529 IYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRV 588
G++CECD NC+R NG +CG G G+C C C C+P + GSAC C T C
Sbjct: 548 YSGKFCECDNFNCDRSNGLICG--GNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQ 605
Query: 589 ECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC 647
C+GRG C C VC+C +Q C+ C C C ++ C +C F KG C+ C
Sbjct: 606 ICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQEC 665
Query: 648 PGLQLSN-----------NPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECV 696
++ P CKE+D + CW +T +G + +++V E+ EC
Sbjct: 666 SYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTY-SVNGNNEVMVHVVENPECP 724
Query: 697 AGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN 748
GP+I IV G VAGIVLIG+ LL+IWK L+ + D RE+ +FEKEK+ ++W+
Sbjct: 725 TGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWD 776
>gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens]
Length = 789
Score = 708 bits (1827), Expect = 0.0
Identities = 352/772 (45%), Positives = 475/772 (61%), Gaps = 39/772 (5%)
Query: 12 VGLLS-LGCVLSQ----ECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRP 66
+GL+S + CV +Q C K SC ECI++GP C WC F G P S RCD
Sbjct: 9 IGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLE 68
Query: 67 QLLMRGCAADDIMDPTSLAETQEDHNGGQK--------------QLSPQKVTLYLRPGQA 112
L +GC DDI +P + +++ N + Q+ PQ++ L LR G+
Sbjct: 69 ALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEP 128
Query: 113 AAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFV 172
F + F+RA+ YPIDLYYLMDLSYSM DDL NVK LG DL+ + IT RIGFGSFV
Sbjct: 129 QTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFV 188
Query: 173 DKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDA 232
+KTV+P+++T P KLRNPC + E+ C PF++++VL LTN F VGKQ ISGNLD+
Sbjct: 189 EKTVMPYISTTPAKLRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDS 247
Query: 233 PEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNL 292
PEGG DA+MQVA C IGWRNVTRLLVF+TD GFHFAGDGKLG I+ PNDG+CHLE+N+
Sbjct: 248 PEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNM 307
Query: 293 YKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNV 352
Y S+ +DYPS+ L KL+ENNIQ IFAVT Y++L +IPKSAVG LS +SSNV
Sbjct: 308 YTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNV 367
Query: 353 VQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQ 412
+QLI +AYN LSS V L++ L + + ++Y S+C NGV + C + I + F+
Sbjct: 368 IQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFE 427
Query: 413 VKVTATECIQE--QSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS-LCH-GKGFLECG 468
+ +T+ +C ++ SF IR LGFT+ V V + CEC C+ + S CH G G ECG
Sbjct: 428 ISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECG 487
Query: 469 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKL 528
CRC+ G +G++CEC T +S++++ CRK+N+S ICS G+CVCGQC+C D ++
Sbjct: 488 ACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEI 547
Query: 529 IYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRV 588
G++CECD NC+R NG +CG G G+C C C C+P + GSAC C T C
Sbjct: 548 YSGKFCECDNFNCDRSNGLICG--GNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQ 605
Query: 589 ECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC 647
C+GRG C C VC+C +Q C+ C C C ++ C +C F KG C+ C
Sbjct: 606 ICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQEC 665
Query: 648 PGLQLSN-----------NPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECV 696
++ P CKE+D + CW +T +G + +++V E+ EC
Sbjct: 666 SYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTY-SVNGNNEVMVHVVENPECP 724
Query: 697 AGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN 748
GP+I IV G VAGIVLIG+ LL+IWK L+ + D RE+ +FEKEK+ ++W+
Sbjct: 725 TGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWD 776
>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
Length = 819
Score = 708 bits (1827), Expect = 0.0
Identities = 352/772 (45%), Positives = 475/772 (61%), Gaps = 39/772 (5%)
Query: 12 VGLLS-LGCVLSQ----ECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRP 66
+GL+S + CV +Q C K SC ECI++GP C WC F G P S RCD
Sbjct: 9 IGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLE 68
Query: 67 QLLMRGCAADDIMDPTSLAETQEDHNGGQK--------------QLSPQKVTLYLRPGQA 112
L +GC DDI +P + +++ N + Q+ PQ++ L LR G+
Sbjct: 69 ALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEP 128
Query: 113 AAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFV 172
F + F+RA+ YPIDLYYLMDLSYSM DDL NVK LG DL+ + IT RIGFGSFV
Sbjct: 129 QTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFV 188
Query: 173 DKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDA 232
+KTV+P+++T P KLRNPC + E+ C PF++++VL LTN F VGKQ ISGNLD+
Sbjct: 189 EKTVMPYISTTPAKLRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDS 247
Query: 233 PEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNL 292
PEGG DA+MQVA C IGWRNVTRLLVF+TD GFHFAGDGKLG I+ PNDG+CHLE+N+
Sbjct: 248 PEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNM 307
Query: 293 YKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNV 352
Y S+ +DYPS+ L KL+ENNIQ IFAVT Y++L +IPKSAVG LS +SSNV
Sbjct: 308 YTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNV 367
Query: 353 VQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQ 412
+QLI +AYN LSS V L++ L + + ++Y S+C NGV + C + I + F+
Sbjct: 368 IQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFE 427
Query: 413 VKVTATECIQE--QSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS-LCH-GKGFLECG 468
+ +T+ +C ++ SF IR LGFT+ V V + CEC C+ + S CH G G ECG
Sbjct: 428 ISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECG 487
Query: 469 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKL 528
CRC+ G +G++CEC T +S++++ CRK+N+S ICS G+CVCGQC+C D ++
Sbjct: 488 ACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEI 547
Query: 529 IYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRV 588
G++CECD NC+R NG +CG G G+C C C C+P + GSAC C T C
Sbjct: 548 YSGKFCECDNFNCDRSNGLICG--GNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQ 605
Query: 589 ECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC 647
C+GRG C C VC+C +Q C+ C C C ++ C +C F KG C+ C
Sbjct: 606 ICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQEC 665
Query: 648 PGLQLSN-----------NPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECV 696
++ P CKE+D + CW +T +G + +++V E+ EC
Sbjct: 666 SYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTY-SVNGNNEVMVHVVENPECP 724
Query: 697 AGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN 748
GP+I IV G VAGIVLIG+ LL+IWK L+ + D RE+ +FEKEK+ ++W+
Sbjct: 725 TGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWD 776
>gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens]
Length = 788
Score = 576 bits (1484), Expect = e-164
Identities = 312/782 (39%), Positives = 445/782 (56%), Gaps = 39/782 (4%)
Query: 8 LLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQ 67
+LAL L +G CT VSSC++C+ P C WC G P RCD +
Sbjct: 14 VLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSD-EALPLGSP---RCDLKEN 69
Query: 68 LLMRGCAADDIMDPTSLAETQEDHNGGQK---------QLSPQKVTLYLRPGQAAAFNVT 118
LL CA + I P S A ED K Q+SPQ++ L LRP + F++
Sbjct: 70 LLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQ 129
Query: 119 FRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLP 178
R+ + YP+D+YYLMDLSYSM DDL +++ LG L + ++T + RIGFG+FVDK V P
Sbjct: 130 VRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSP 189
Query: 179 FVN-THPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGL 237
++ + P+ L NPC + + C P F ++HVL LT+ +F EV KQ +S N DAPEGG
Sbjct: 190 YMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGF 249
Query: 238 DAMMQVAACPEEIGWRN-VTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHL-EDNLYKR 295
DA+MQ C E+IGWRN + LLVF TD H A DG+L I+ PNDG+CH+ DN Y
Sbjct: 250 DAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSA 309
Query: 296 SNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQL 355
S DYPS+G + KL++ NI IFAVT +V Y+ +E+IP + VG LS DSSNV+QL
Sbjct: 310 STTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQL 369
Query: 356 IKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKV 415
I +AY K+ S+V L+ LP+ L +++++ C N C G++I ++F ++
Sbjct: 370 IVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLK--SCMGLKIGDTVSFSIEA 427
Query: 416 TATECIQ--EQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS--LCHGKGFLECGICR 471
C Q E+SF I+ +GF D + VQV C+C C+ Q+ S +G G ECG+CR
Sbjct: 428 KVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCR 487
Query: 472 CDTGYIGKNCECQTQG-RSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIY 530
C G++G CEC + R SQ+ E C +CS G+C+CGQC+CH+SD GK I
Sbjct: 488 CGPGWLGSQCECSEEDYRPSQQDE--CSPREGQPVCSQRGECLCGQCVCHSSDF-GK-IT 543
Query: 531 GQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVEC 590
G+YCECD +C RY G++C G G+ C CG C C + G C C T+ C++ + C
Sbjct: 544 GKYCECDDFSCVRYKGEMCSGHGQ--CSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLC 601
Query: 591 SGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPF--GKNCSAAC 647
SGRG+C C C C G C++CP CP C C EC KF++G C+ C
Sbjct: 602 SGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYC 661
Query: 648 PG-----LQLSNNPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIA 702
+L + C ++ + C V + +D + ++YV E EC GP+I
Sbjct: 662 RDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQY-YEDSSGKSILYVVEEPECPKGPDIL 720
Query: 703 AIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWNN-DNPLFKSATTTV 761
++ + I+LIG+ L+IWK LI + D +E+ +FE+E+ +++W+ +NPL+K AT+T
Sbjct: 721 VVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTF 780
Query: 762 MN 763
N
Sbjct: 781 TN 782
>gi|9625002 integrin, beta 6 [Homo sapiens]
Length = 788
Score = 555 bits (1431), Expect = e-158
Identities = 298/761 (39%), Positives = 424/761 (55%), Gaps = 34/761 (4%)
Query: 25 CTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSL 84
C +C +C+ GP C WC + NFT P RCDT LL +GC + I +P S
Sbjct: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGE-RCDTPANLLAKGCQLNFIENPVSQ 81
Query: 85 AETQEDHN---GGQK------QLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDL 135
E ++ G QK Q++PQ + L LRPG A V R+ + YP+DLYYLMDL
Sbjct: 82 VEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDL 141
Query: 136 SYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKE 195
S SM DDL +K+LG L + ++++T + R+GFGSFV+K V PFV T P+++ NPC +
Sbjct: 142 SASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIP 201
Query: 196 KECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRNV 255
C P F F+H+L LTN++ +F V Q IS N+D PEGG DA+MQ A C E+IGWRN
Sbjct: 202 YFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRND 261
Query: 256 T-RLLVFATDDGFHFAGDGKLGAILTPNDGRCHLED-NLYKRSNEFDYPSVGQLAHKLAE 313
+ LLVF +D HF D KL I+ PNDG CHL+ N Y S +YP++GQL KL +
Sbjct: 262 SLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLVQ 321
Query: 314 NNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLDHNA 373
NN+ IFAVT V YE ++IP + VG L +DS N++QLI +AY +L S V L+
Sbjct: 322 NNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEVLG 381
Query: 374 LPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATEC-IQEQSFVIRALG 432
+ L +++ + C+NG ++Q + C +++ +F V V C + + +I+ +G
Sbjct: 382 DTEGLNLSFTAICNNGTLFQHQKK--CSHMKVGDTASFSVTVNIPHCERRSRHIIIKPVG 439
Query: 433 FTDIVTVQVLPQCECRCRDQSR-DRSLC-HGKGFLECGICRCDTGYIGKNCECQTQGRSS 490
D + + V P+C C C+ + + S C HG G +CG+C C G++G CEC S+
Sbjct: 440 LGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLST 499
Query: 491 QELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCG 550
SC++ + CSG GDC CGQC+CH S P IYG YC+CD +C R+ G +CG
Sbjct: 500 D----SCKEAPDHPSCSGRGDCYCGQCICHLS--PYGNIYGPYCQCDNFSCVRHKGLLCG 553
Query: 551 GPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCEC-HSGYQL 609
G G C CG+C C G+ G C C +T+ C++ V CSGRG C C C C + G
Sbjct: 554 --GNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASG 611
Query: 610 PLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC--PGLQLSNNPVKGR----TCK 663
P C+ CP C PC SC EC G + C C G +S + +C
Sbjct: 612 PTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEEDFSKDGSVSCS 671
Query: 664 ERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIW 723
+ C + + L D + +I+ ++C PNI I+ G I+LIG++LL IW
Sbjct: 672 LQGENECLITF-LITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIGVVLLCIW 730
Query: 724 KALIHLSDLREYRRFEKEKLKSQW-NNDNPLFKSATTTVMN 763
K L+ D +E +FE E+ K++W NPL++ +T+T N
Sbjct: 731 KLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKN 771
>gi|20127446 integrin, beta 5 [Homo sapiens]
Length = 799
Score = 532 bits (1371), Expect = e-151
Identities = 304/789 (38%), Positives = 414/789 (52%), Gaps = 49/789 (6%)
Query: 1 MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSI 60
+LGL L L GL CT +SC EC+ P C WC K +F G P SI
Sbjct: 12 LLGLCALLPRLAGL--------NICTSGSATSCEECLLIHPKCAWCSKEDF---GSPRSI 60
Query: 61 --RCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQK----------QLSPQKVTLYLR 108
RCD R L+ GC + I P S K Q++PQ++ + LR
Sbjct: 61 TSRCDLRANLVKNGCGGE-IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLR 119
Query: 109 PGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGF 168
PG F + R+ + YP+DLYYLMDLS SM DDL N++ LG L + ++T + R+GF
Sbjct: 120 PGDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGF 179
Query: 169 GSFVDKTVLPFVNTHPDKLRNPCPNKE--KECQPPFAFRHVLKLTNNSNQFQTEVGKQLI 226
GSFVDK + PF T P NPC + C P F FRH+L LT+ + F EV KQ +
Sbjct: 180 GSFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRV 239
Query: 227 SGNLDAPEGGLDAMMQVAACPEEIGWR-NVTRLLVFATDDGFHFAGDGKLGAILTPNDGR 285
S N DAPEGG DA++Q A C E+IGWR + LLVF TDD H A DGKLG ++ P+DG+
Sbjct: 240 SRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQ 299
Query: 286 CHL-EDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGE 344
CHL E N Y SN+ DYPS+ L KLAENNI IFAVT Y+ T +IP + V
Sbjct: 300 CHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEI 359
Query: 345 LSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQ 404
L DS N++QLI NAYN + S+V L P+ L + + + C +GV++ Q + C+G++
Sbjct: 360 LDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRK--CEGLK 417
Query: 405 INVPITFQVKVTATECIQ---EQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSL-CH 460
I +F+V + A C E F +R +GF D + V V C C C S C+
Sbjct: 418 IGDTASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN 477
Query: 461 GKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCH 520
G G CG+C C GY+G CECQ G + + CR+ +CSG GDC C QC C
Sbjct: 478 GSGTYVCGLCECSPGYLGTRCECQ-DGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCF 536
Query: 521 TSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTE 580
S+ GK IYG +CECD +C R G +C G G C CG+C+CH G+ G C C
Sbjct: 537 ESEF-GK-IYGPFCECDNFSCARNKGVLCSGHGE--CHCGECKCHAGYIGDNCNCSTDIS 592
Query: 581 GCLNPRRVECSGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKG-P 638
C CS RG C C C+C G +C++CP CP C C ECL G P
Sbjct: 593 TCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKP 652
Query: 639 FGKNCSAACPGLQLS------NNPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDES 692
+ C + C ++ + + C + ++ C + +T + L + E
Sbjct: 653 DNQTCHSLCRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREP 712
Query: 693 RECVAGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWN-NDN 751
EC PN I+ V I+L+G+ LL IWK L+ + D RE+ +F+ E+ ++++ N
Sbjct: 713 -ECGNTPNAMTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASN 771
Query: 752 PLFKSATTT 760
PL++ +T
Sbjct: 772 PLYRKPIST 780
>gi|4504779 integrin, beta 8 precursor [Homo sapiens]
Length = 769
Score = 432 bits (1110), Expect = e-121
Identities = 246/722 (34%), Positives = 365/722 (50%), Gaps = 57/722 (7%)
Query: 14 LLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGC 73
+L LG C +SC C+ GP C WC + +F G S RCD L+ +GC
Sbjct: 36 VLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGSR-SERCDIVSNLISKGC 94
Query: 74 AADDIMDPTS--LAETQEDHNGGQKQLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYY 131
+ D I P+ + T+ + N Q++P +V++ LRPG A F + K YP+DLYY
Sbjct: 95 SVDSIEYPSVHVIIPTENEIN---TQVTPGEVSIQLRPGAEANFMLKVHPLKKYPVDLYY 151
Query: 132 LMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPC 191
L+D+S SM +++ + +G DL R + + R+GFGS+VDKTV P+++ HP+++ N C
Sbjct: 152 LVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYISIHPERIHNQC 211
Query: 192 PNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIG 251
+ +C PP + HVL LT N +F+ V +Q ISGN+D PEGG DAM+Q A C IG
Sbjct: 212 SDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAMLQAAVCESHIG 271
Query: 252 WR-NVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHK 310
WR RLL+ TD H A D KL I+ PNDG CHL++N+Y +S ++PS+GQL+ K
Sbjct: 272 WRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKNNVYVKSTTMEHPSLGQLSEK 331
Query: 311 LAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLD 370
L +NNI IFAV + Y+ L ++P + GE+ ++N+ L+ AY KL S V +
Sbjct: 332 LIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAANLNNLVVEAYQKLISEVKVQ 391
Query: 371 HNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECI---QEQSFV 427
+ + C +G R C V N + F V VT +C + +
Sbjct: 392 VENQVQGIYFNITAICPDG--SRKPGMEGCRNVTSNDEVLFNVTVTMKKCDVTGGKNYAI 449
Query: 428 IRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQG 487
I+ +GF + + + C C+C D + C + FL+ +CD C
Sbjct: 450 IKPIGFNETAKIHIHRNCSCQCEDNRGPKGKCVDETFLDSKCFQCDE----NKCHFDEDQ 505
Query: 488 RSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQ 547
SS+ SC+ + +CSG G CVCG+C CH + GK +YG+YCE D +C ++G
Sbjct: 506 FSSE----SCKSHKDQPVCSGRGVCVCGKCSCHKIKL-GK-VYGKYCEKDDFSCPYHHGN 559
Query: 548 VCGGPGRGLCFCGKCRCHPGFEGSACQC-ERTTEGCLNPRRVECSGRGRCRCNVCECHSG 606
+C G G C G+C+C G+EG CQC + C+N + CSGRG C C CEC
Sbjct: 560 LCAGHGE--CEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDP 617
Query: 607 YQL-PLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKER 665
+ C+ CP C + C + +C +CL N S A
Sbjct: 618 RSIGRFCEHCPTCYTACKENWNCMQCL------HPHNLSQAI------------------ 653
Query: 666 DSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIWKA 725
+ C + L +Q YVD++ EC + P+ I LIG+L ++I +
Sbjct: 654 -LDQCKTSCALMEQQH------YVDQTSECFSSPSYLRIFFIIFIVTFLIGLLKVLIIRQ 706
Query: 726 LI 727
+I
Sbjct: 707 VI 708
>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
Length = 1805
Score = 394 bits (1012), Expect = e-109
Identities = 273/805 (33%), Positives = 399/805 (49%), Gaps = 73/805 (9%)
Query: 1 MLGLRPP-----LLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPG 55
M G RP LLA + +SL L+ C K V SC EC+ C +C F
Sbjct: 1 MAGPRPSPWARLLLAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMFRDR- 59
Query: 56 DPDSIRCDTRPQLLMRGCAADDIMDPTS----LAETQEDHNGGQKQLSPQKVTLYLRPGQ 111
RC+T+ +LL GC + I+ S ETQ D + Q+SPQ + + LRPG+
Sbjct: 60 -----RCNTQAELLAAGCQRESIVVMESSFQITEETQIDTTLRRSQMSPQGLRVRLRPGE 114
Query: 112 AAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSF 171
F + P+DLY LMD S SM DDL N+KK+G +L R L+++T IGFG F
Sbjct: 115 ERHFELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKF 174
Query: 172 VDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLD 231
VDK +P + P+KL+ P PN + PPF+F++V+ LT + ++F+ ++ + ISGNLD
Sbjct: 175 VDKVSVPQTDMRPEKLKEPWPNSD----PPFSFKNVISLTEDVDEFRNKLQGERISGNLD 230
Query: 232 APEGGLDAMMQVAACPEEIGWR-NVTRLLVFATDDGFHFAGDGK--LGAILTPNDGRCHL 288
APEGG DA++Q A C +IGWR + T LLVF+T+ FH+ DG L I++ ND RCHL
Sbjct: 231 APEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHL 290
Query: 289 E-DNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSE 347
+ Y + DYPSV L LA++NI PIFAVT+ YEKL P S++G L E
Sbjct: 291 DTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQE 350
Query: 348 DSSNVVQLIKNAYNKLSSRVFLDHNALPD----TLKVTYDSFCSNGVTHRNQPRGDCDGV 403
DSSN+V+L++ A+N++ S LD AL +VT F + RG+
Sbjct: 351 DSSNIVELLEEAFNRIRSN--LDIRALDSPRGLRTEVTSKMFQKTRTGSFHIRRGEVGIY 408
Query: 404 QINVPITFQVKVT-ATECIQEQSFVIRAL-GFTDIVTVQVLPQCE-CRCRDQSRDRSL-C 459
Q+ + V T + ++Q I F+D + + C+ C C Q RS C
Sbjct: 409 QVQLRALEHVDGTHVCQLPEDQKGNIHLKPSFSDGLKMDAGIICDVCTCELQKEVRSARC 468
Query: 460 HGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLC 519
G CG C C G+ G+ C C T S + C ++ CSG G+C CG C+C
Sbjct: 469 SFNGDFVCGQCVCSEGWSGQTCNCSTGSLSDIQ---PCLREGEDKPCSGRGECQCGHCVC 525
Query: 520 HTSDVPGKLIY-GQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERT 578
+ G+ Y GQ+CE D C R +G +C RG C G+C C PG+ G +C C +
Sbjct: 526 Y-----GEGRYEGQFCEYDNFQCPRTSGFLCN--DRGRCSMGQCVCEPGWTGPSCDCPLS 578
Query: 579 TEGCLNPRRVECSGRGRCRCNVCECH--SGYQLPLCQECPGC--PSPCGKYISCAECLKF 634
C++ C+GRG C C C CH S Y +C+ P C SC +C +
Sbjct: 579 NATCIDSNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAW 638
Query: 635 EKG-PFGKNCSAACPGLQLSNNPVKGR----TCKERD-SEGCWVAYTLEQQDGM--DRYL 686
G G+ C +++ + + C RD + C +YT+E DG
Sbjct: 639 GTGEKKGRTCEECNFKVKMVDELKRAEEVVVRCSFRDEDDDCTYSYTME-GDGAPGPNST 697
Query: 687 IYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIWK---------ALI------HLSD 731
+ V + ++C G + ++ + + L+ +LLL+ WK AL+ H+
Sbjct: 698 VLVHKKKDCPPG-SFWWLIPLLLLLLPLLALLLLLCWKYCACCKACLALLPCCNRGHMVG 756
Query: 732 LREYRRFEKEKLKSQWNNDNPLFKS 756
+E +E L + + D P+ +S
Sbjct: 757 FKEDHYMLRENLMASDHLDTPMLRS 781
>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
Length = 1822
Score = 394 bits (1012), Expect = e-109
Identities = 273/805 (33%), Positives = 399/805 (49%), Gaps = 73/805 (9%)
Query: 1 MLGLRPP-----LLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPG 55
M G RP LLA + +SL L+ C K V SC EC+ C +C F
Sbjct: 1 MAGPRPSPWARLLLAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMFRDR- 59
Query: 56 DPDSIRCDTRPQLLMRGCAADDIMDPTS----LAETQEDHNGGQKQLSPQKVTLYLRPGQ 111
RC+T+ +LL GC + I+ S ETQ D + Q+SPQ + + LRPG+
Sbjct: 60 -----RCNTQAELLAAGCQRESIVVMESSFQITEETQIDTTLRRSQMSPQGLRVRLRPGE 114
Query: 112 AAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSF 171
F + P+DLY LMD S SM DDL N+KK+G +L R L+++T IGFG F
Sbjct: 115 ERHFELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKF 174
Query: 172 VDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLD 231
VDK +P + P+KL+ P PN + PPF+F++V+ LT + ++F+ ++ + ISGNLD
Sbjct: 175 VDKVSVPQTDMRPEKLKEPWPNSD----PPFSFKNVISLTEDVDEFRNKLQGERISGNLD 230
Query: 232 APEGGLDAMMQVAACPEEIGWR-NVTRLLVFATDDGFHFAGDGK--LGAILTPNDGRCHL 288
APEGG DA++Q A C +IGWR + T LLVF+T+ FH+ DG L I++ ND RCHL
Sbjct: 231 APEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHL 290
Query: 289 E-DNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSE 347
+ Y + DYPSV L LA++NI PIFAVT+ YEKL P S++G L E
Sbjct: 291 DTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQE 350
Query: 348 DSSNVVQLIKNAYNKLSSRVFLDHNALPD----TLKVTYDSFCSNGVTHRNQPRGDCDGV 403
DSSN+V+L++ A+N++ S LD AL +VT F + RG+
Sbjct: 351 DSSNIVELLEEAFNRIRSN--LDIRALDSPRGLRTEVTSKMFQKTRTGSFHIRRGEVGIY 408
Query: 404 QINVPITFQVKVT-ATECIQEQSFVIRAL-GFTDIVTVQVLPQCE-CRCRDQSRDRSL-C 459
Q+ + V T + ++Q I F+D + + C+ C C Q RS C
Sbjct: 409 QVQLRALEHVDGTHVCQLPEDQKGNIHLKPSFSDGLKMDAGIICDVCTCELQKEVRSARC 468
Query: 460 HGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLC 519
G CG C C G+ G+ C C T S + C ++ CSG G+C CG C+C
Sbjct: 469 SFNGDFVCGQCVCSEGWSGQTCNCSTGSLSDIQ---PCLREGEDKPCSGRGECQCGHCVC 525
Query: 520 HTSDVPGKLIY-GQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERT 578
+ G+ Y GQ+CE D C R +G +C RG C G+C C PG+ G +C C +
Sbjct: 526 Y-----GEGRYEGQFCEYDNFQCPRTSGFLCN--DRGRCSMGQCVCEPGWTGPSCDCPLS 578
Query: 579 TEGCLNPRRVECSGRGRCRCNVCECH--SGYQLPLCQECPGC--PSPCGKYISCAECLKF 634
C++ C+GRG C C C CH S Y +C+ P C SC +C +
Sbjct: 579 NATCIDSNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAW 638
Query: 635 EKG-PFGKNCSAACPGLQLSNNPVKGR----TCKERD-SEGCWVAYTLEQQDGM--DRYL 686
G G+ C +++ + + C RD + C +YT+E DG
Sbjct: 639 GTGEKKGRTCEECNFKVKMVDELKRAEEVVVRCSFRDEDDDCTYSYTME-GDGAPGPNST 697
Query: 687 IYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIWK---------ALI------HLSD 731
+ V + ++C G + ++ + + L+ +LLL+ WK AL+ H+
Sbjct: 698 VLVHKKKDCPPG-SFWWLIPLLLLLLPLLALLLLLCWKYCACCKACLALLPCCNRGHMVG 756
Query: 732 LREYRRFEKEKLKSQWNNDNPLFKS 756
+E +E L + + D P+ +S
Sbjct: 757 FKEDHYMLRENLMASDHLDTPMLRS 781
>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
Length = 1752
Score = 394 bits (1012), Expect = e-109
Identities = 273/805 (33%), Positives = 399/805 (49%), Gaps = 73/805 (9%)
Query: 1 MLGLRPP-----LLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPG 55
M G RP LLA + +SL L+ C K V SC EC+ C +C F
Sbjct: 1 MAGPRPSPWARLLLAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMFRDR- 59
Query: 56 DPDSIRCDTRPQLLMRGCAADDIMDPTS----LAETQEDHNGGQKQLSPQKVTLYLRPGQ 111
RC+T+ +LL GC + I+ S ETQ D + Q+SPQ + + LRPG+
Sbjct: 60 -----RCNTQAELLAAGCQRESIVVMESSFQITEETQIDTTLRRSQMSPQGLRVRLRPGE 114
Query: 112 AAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSF 171
F + P+DLY LMD S SM DDL N+KK+G +L R L+++T IGFG F
Sbjct: 115 ERHFELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKF 174
Query: 172 VDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLD 231
VDK +P + P+KL+ P PN + PPF+F++V+ LT + ++F+ ++ + ISGNLD
Sbjct: 175 VDKVSVPQTDMRPEKLKEPWPNSD----PPFSFKNVISLTEDVDEFRNKLQGERISGNLD 230
Query: 232 APEGGLDAMMQVAACPEEIGWR-NVTRLLVFATDDGFHFAGDGK--LGAILTPNDGRCHL 288
APEGG DA++Q A C +IGWR + T LLVF+T+ FH+ DG L I++ ND RCHL
Sbjct: 231 APEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHL 290
Query: 289 E-DNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSE 347
+ Y + DYPSV L LA++NI PIFAVT+ YEKL P S++G L E
Sbjct: 291 DTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQE 350
Query: 348 DSSNVVQLIKNAYNKLSSRVFLDHNALPD----TLKVTYDSFCSNGVTHRNQPRGDCDGV 403
DSSN+V+L++ A+N++ S LD AL +VT F + RG+
Sbjct: 351 DSSNIVELLEEAFNRIRSN--LDIRALDSPRGLRTEVTSKMFQKTRTGSFHIRRGEVGIY 408
Query: 404 QINVPITFQVKVT-ATECIQEQSFVIRAL-GFTDIVTVQVLPQCE-CRCRDQSRDRSL-C 459
Q+ + V T + ++Q I F+D + + C+ C C Q RS C
Sbjct: 409 QVQLRALEHVDGTHVCQLPEDQKGNIHLKPSFSDGLKMDAGIICDVCTCELQKEVRSARC 468
Query: 460 HGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLC 519
G CG C C G+ G+ C C T S + C ++ CSG G+C CG C+C
Sbjct: 469 SFNGDFVCGQCVCSEGWSGQTCNCSTGSLSDIQ---PCLREGEDKPCSGRGECQCGHCVC 525
Query: 520 HTSDVPGKLIY-GQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERT 578
+ G+ Y GQ+CE D C R +G +C RG C G+C C PG+ G +C C +
Sbjct: 526 Y-----GEGRYEGQFCEYDNFQCPRTSGFLCN--DRGRCSMGQCVCEPGWTGPSCDCPLS 578
Query: 579 TEGCLNPRRVECSGRGRCRCNVCECH--SGYQLPLCQECPGC--PSPCGKYISCAECLKF 634
C++ C+GRG C C C CH S Y +C+ P C SC +C +
Sbjct: 579 NATCIDSNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAW 638
Query: 635 EKG-PFGKNCSAACPGLQLSNNPVKGR----TCKERD-SEGCWVAYTLEQQDGM--DRYL 686
G G+ C +++ + + C RD + C +YT+E DG
Sbjct: 639 GTGEKKGRTCEECNFKVKMVDELKRAEEVVVRCSFRDEDDDCTYSYTME-GDGAPGPNST 697
Query: 687 IYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIWK---------ALI------HLSD 731
+ V + ++C G + ++ + + L+ +LLL+ WK AL+ H+
Sbjct: 698 VLVHKKKDCPPG-SFWWLIPLLLLLLPLLALLLLLCWKYCACCKACLALLPCCNRGHMVG 756
Query: 732 LREYRRFEKEKLKSQWNNDNPLFKS 756
+E +E L + + D P+ +S
Sbjct: 757 FKEDHYMLRENLMASDHLDTPMLRS 781
>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
[Homo sapiens]
Length = 494
Score = 132 bits (331), Expect = 2e-30
Identities = 67/172 (38%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 443 PQCECR---CRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRK 499
P CEC C ++ D S C G G +CG C+CD G+ G C+ T +++ K
Sbjct: 87 PLCECHEWVC--ETYDGSTCAGHGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCK 144
Query: 500 DNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINC-ERYNGQVCGGPGRGLCF 558
++ IICS G C CG+C C SD G L+YG++CECD C + ++CGG G+ C+
Sbjct: 145 NSQDIICSNAGTCHCGRCKCDNSDGSG-LVYGKFCECDDRECIDDETEEICGGHGK--CY 201
Query: 559 CGKCRCHPGFEGSAC--QCERT----TEGCLNPRRVECSGRGRCRCNVCECH 604
CG C C G+ G C QC+ T C +P CS RG C C C CH
Sbjct: 202 CGNCYCKAGWHGDKCEFQCDITPWESKRRCTSPDGKICSNRGTCVCGECTCH 253
Score = 119 bits (298), Expect = 1e-26
Identities = 76/228 (33%), Positives = 102/228 (44%), Gaps = 36/228 (15%)
Query: 445 CECRCRDQSRDRS--LCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNN 502
CEC R+ D + +C G G CG C C G+ G CE Q + E + C +
Sbjct: 178 CECDDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCD-ITPWESKRRCTSPDG 236
Query: 503 SIICSGLGDCVCGQCLCHTSDVPGKL--IYGQYCECDTINC----ERYNGQVCGGPGRGL 556
I CS G CVCG+C CH D G I+G CECD +C +RY+ C G G+
Sbjct: 237 KI-CSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQ-- 293
Query: 557 CFCGKCRCHPGFEGSACQ--------CERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQ 608
C CG+C C G+ G C+ E + C + CSGRG+C C C C+
Sbjct: 294 CNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPPGD 353
Query: 609 LPL-----------CQECPGCPSPCGKY--ISCAECLKFEKGPFGKNC 643
+ C++ G CG + SC C+ E+G FGK C
Sbjct: 354 RRVYGKTCECDDRRCEDLDGV--VCGGHGTCSCGRCV-CERGWFGKLC 398
Score = 118 bits (295), Expect = 2e-26
Identities = 69/174 (39%), Positives = 88/174 (50%), Gaps = 21/174 (12%)
Query: 445 CECRCRDQSR--DR---SLCHGKGFLECGICRCDTGYIGKNCEC-QTQGRSSQELEGSCR 498
CEC RD DR C G G CG C C G+ GK CE Q+ S++E C+
Sbjct: 269 CECDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQ 328
Query: 499 KDNNSIICSGLGDCVCGQCLCHTSDVPG-KLIYGQYCECDTINCERYNGQVCGGPGRGLC 557
++ + CSG G C CG+C C+ PG + +YG+ CECD CE +G VCG G G C
Sbjct: 329 -GSSDLPCSGRGKCECGKCTCYP---PGDRRVYGKTCECDDRRCEDLDGVVCG--GHGTC 382
Query: 558 FCGKCRCHPGFEGSACQ----CERTTEG----CLNPRRVECSGRGRCRCNVCEC 603
CG+C C G+ G CQ C T E C + + CSG+G C C C C
Sbjct: 383 SCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESADGILCSGKGSCHCGKCIC 436
Score = 107 bits (268), Expect = 3e-23
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 10/133 (7%)
Query: 445 CEC---RCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDN 501
CEC RC D D +C G G CG C C+ G+ GK C+ + ++E + +
Sbjct: 361 CECDDRRCEDL--DGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESA 418
Query: 502 NSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGK 561
+ I+CSG G C CG+C+C + I G++C+CD +C++++G +C G G+C CG
Sbjct: 419 DGILCSGKGSCHCGKCICSAEE---WYISGEFCDCDDRDCDKHDGLIC--TGNGICSCGN 473
Query: 562 CRCHPGFEGSACQ 574
C C G+ G+AC+
Sbjct: 474 CECWDGWNGNACE 486
Score = 97.1 bits (240), Expect = 6e-20
Identities = 55/160 (34%), Positives = 76/160 (47%), Gaps = 26/160 (16%)
Query: 489 SSQELEGSCRKDNN---SIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYN 545
S E E CR + +C G G C CG C+CH ++ PG + +G CEC CE Y+
Sbjct: 43 SRAESERRCRAPGQPPGAALCHGRGRCDCGVCICHVTE-PG-MFFGPLCECHEWVCETYD 100
Query: 546 GQVCGGPGRGLCFCGKCRCHPGFEGSACQ----CE----RTTEGCLNPRRVECSGRGRCR 597
G C G G+ C CGKC+C G+ G ACQ C+ ++ + C N + + CS G C
Sbjct: 101 GSTCAGHGK--CDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCH 158
Query: 598 CNVCECHSGYQLPLCQECPGCPSPCGKYISC--AECLKFE 635
C C+C + G GK+ C EC+ E
Sbjct: 159 CGRCKCDNS---------DGSGLVYGKFCECDDRECIDDE 189
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 87.8 bits (216), Expect = 3e-17
Identities = 77/272 (28%), Positives = 97/272 (35%), Gaps = 64/272 (23%)
Query: 446 ECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNC-------ECQTQGRSSQEL----- 493
+C R RD C G+G E G C CDTGY G +C +C +GR
Sbjct: 367 DCSTRTCPRD---CRGRGRCEDGECICDTGYSGDDCGVRSCPGDCNQRGRCEDGRCVCWP 423
Query: 494 --------EGSCRKDNNSIICSGLGDCVCGQCLCHTS---------DVPGKLIYGQYCEC 536
+C +D C G G C G C+C+ PG CE
Sbjct: 424 GYTGTDCGSRACPRD-----CRGRGRCENGVCVCNAGYSGEDCGVRSCPGDCRGRGRCES 478
Query: 537 DTINC-ERYNGQVCGGP-------GRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRV 588
C Y G+ CG GRG C G+C C+PGF G C R
Sbjct: 479 GRCMCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGFTGEDCGSRRCPG-------- 530
Query: 589 ECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISCAE--CLKFEKGPFGKNCSA- 645
+C G G C VC C +GY C CP C C + C+ E G G++C
Sbjct: 531 DCRGHGLCEDGVCVCDAGYSGEDC-STRSCPGGCRGRGQCLDGRCV-CEDGYSGEDCGVR 588
Query: 646 ACPGLQLSNNPVKGRTCKERDSEGCWVAYTLE 677
CP + + C CW Y E
Sbjct: 589 QCPNDCSQHGVCQDGVCI------CWEGYVSE 614
Score = 80.1 bits (196), Expect = 7e-15
Identities = 81/275 (29%), Positives = 103/275 (37%), Gaps = 63/275 (22%)
Query: 445 CECR-------CRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSC 497
C CR C +S R C +G E G C CD GY G +C ++ R + G C
Sbjct: 233 CVCRAGFSGPDCSQRSCPRG-CSQRGRCEGGRCVCDPGYTGDDCGMRSCPRGCSQ-RGRC 290
Query: 498 RKDNNSIICS-GLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCG------ 550
+N +C+ G CG C C CD Y G+ CG
Sbjct: 291 --ENGRCVCNPGYTGEDCGVRSCPRGCSQRGRCKDGRCVCDP----GYTGEDCGTRSCPW 344
Query: 551 --GPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQ 608
G G G C G+C C PG+ G C +T C PR +C GRGRC C C +GY
Sbjct: 345 DCGEG-GRCVDGRCVCWPGYTGEDC----STRTC--PR--DCRGRGRCEDGECICDTGYS 395
Query: 609 LPLCQECPGCPSPCGKYISCAE--CLKFEKGPFGKNC-SAACP-----------GLQLSN 654
C CP C + C + C+ + G G +C S ACP G+ + N
Sbjct: 396 GDDC-GVRSCPGDCNQRGRCEDGRCVCW-PGYTGTDCGSRACPRDCRGRGRCENGVCVCN 453
Query: 655 NPVKGRTCKERDSEG--------------CWVAYT 675
G C R G CW YT
Sbjct: 454 AGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYT 488
Score = 75.5 bits (184), Expect = 2e-13
Identities = 76/266 (28%), Positives = 92/266 (34%), Gaps = 75/266 (28%)
Query: 452 QSRDRSLC--HGKGFLECGICRCDTGYIGKNCECQTQGR----SSQELEGSCRKDNNSII 505
Q+ R+LC HG L C C+ G+ G C T S GSC D
Sbjct: 136 QTDVRTLCSLHGVFDLSRCTCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDD----- 190
Query: 506 CSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGP-------GRGLCF 558
C+ G CV G+C+C PG Y G CG P GRG C
Sbjct: 191 CNDQGRCVRGRCVCF----PG-----------------YTGPSCGWPSCPGDCQGRGRCV 229
Query: 559 CGKCRCHPGFEGSACQCERTTEGCLNPRRVE-----------------------CSGRGR 595
G C C GF G C GC R E CS RGR
Sbjct: 230 QGVCVCRAGFSGPDCSQRSCPRGCSQRGRCEGGRCVCDPGYTGDDCGMRSCPRGCSQRGR 289
Query: 596 CRCNVCECHSGYQLPLCQECPGCPSPCGKYISCAE--CLKFEKGPFGKNC-SAACP-GLQ 651
C C C+ GY C CP C + C + C+ + G G++C + +CP
Sbjct: 290 CENGRCVCNPGYTGEDC-GVRSCPRGCSQRGRCKDGRCV-CDPGYTGEDCGTRSCPWDCG 347
Query: 652 LSNNPVKGRTCKERDSEGCWVAYTLE 677
V GR CW YT E
Sbjct: 348 EGGRCVDGRCV-------CWPGYTGE 366
Score = 74.3 bits (181), Expect = 4e-13
Identities = 56/160 (35%), Positives = 62/160 (38%), Gaps = 37/160 (23%)
Query: 457 SLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQ 516
S CHG+G E G C CD GY G C + C D C G G CV G
Sbjct: 623 SNCHGRGRCEEGRCLCDPGYTGPTCATR-----------MCPAD-----CRGRGRCVQGV 666
Query: 517 CLCHTSDVPGKLIYGQYCECDTINCERYNGQVC-GGPG-RGLCFCGKCRCHPGFEGSACQ 574
CLCH YG + E C GG G R LC G+C C GF G C
Sbjct: 667 CLCHVG-------YGG----EDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPDCA 715
Query: 575 CERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQE 614
+ T G +C GRG C C C GY C E
Sbjct: 716 IQ-TCPG-------DCRGRGECHDGSCVCKDGYAGEDCGE 747
>gi|153946395 tenascin C precursor [Homo sapiens]
Length = 2201
Score = 85.9 bits (211), Expect = 1e-16
Identities = 62/202 (30%), Positives = 82/202 (40%), Gaps = 43/202 (21%)
Query: 449 CRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSG 508
C D S CH G G+C CD GY G++C + C +D CS
Sbjct: 465 CSDMSCPND-CHQHGRCVNGMCVCDDGYTGEDCR-----------DRQCPRD-----CSN 507
Query: 509 LGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGF 568
G CV GQC+C +C ++C C G GR C G+C CH GF
Sbjct: 508 RGLCVDGQCVCEDGFTGP--------DCAELSCPND----CHGQGR--CVNGQCVCHEGF 553
Query: 569 EGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISC 628
G C+ +R +C G+GRC C CH G+ C + CPS C C
Sbjct: 554 MGKDCKEQRCPS--------DCHGQGRCVDGQCICHEGFTGLDCGQ-HSCPSDCNNLGQC 604
Query: 629 --AECLKFEKGPFGKNCSAACP 648
C+ +G G++CS P
Sbjct: 605 VSGRCI-CNEGYSGEDCSEVSP 625
Score = 79.0 bits (193), Expect = 2e-14
Identities = 78/286 (27%), Positives = 105/286 (36%), Gaps = 93/286 (32%)
Query: 459 CHGKGFLECGICRCDTGYIGKNC-------ECQTQGRSSQELEGSCRKDNNSI------- 504
CH +G E G C CD G+ G +C +C +GR ++G C D+
Sbjct: 350 CHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRC---VDGRCECDDGFTGADCGEL 406
Query: 505 ----ICSGLGDCVCGQCLC---HTSD-----------------VPGKLIYGQ---YCECD 537
CSG G CV GQC+C +T + V GK + Q +C
Sbjct: 407 KCPNGCSGHGRCVNGQCVCDEGYTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCS 466
Query: 538 TINC------------------ERYNGQVCGG-------PGRGLCFCGKCRCHPGFEGSA 572
++C + Y G+ C RGLC G+C C GF G
Sbjct: 467 DMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVCEDGFTGPD 526
Query: 573 CQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISC--AE 630
C C N +C G+GRC C CH G+ C+E CPS C C +
Sbjct: 527 C----AELSCPN----DCHGQGRCVNGQCVCHEGFMGKDCKE-QRCPSDCHGQGRCVDGQ 577
Query: 631 CLKFEKGPFGKNCSA-ACP-----------GLQLSNNPVKGRTCKE 664
C+ E G G +C +CP G + N G C E
Sbjct: 578 CICHE-GFTGLDCGQHSCPSDCNNLGQCVSGRCICNEGYSGEDCSE 622
Score = 73.9 bits (180), Expect = 5e-13
Identities = 68/249 (27%), Positives = 94/249 (37%), Gaps = 66/249 (26%)
Query: 468 GICRCDTGYIGKNCE-------CQTQGRSSQEL----EGSCRKDNNSIICSG----LGDC 512
G+C C G+ G +C C +GR + EG +D + +IC G C
Sbjct: 266 GLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRC 325
Query: 513 VCGQCLC---------------HTSDVPGKLIYGQYCECDTINCERYNGQVCGGP----- 552
+ G C C H G+ GQ C CD E + G C
Sbjct: 326 INGTCYCEEGFTGEDCGKPTCPHACHTQGRCEEGQ-CVCD----EGFAGVDCSEKRCPAD 380
Query: 553 --GRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLP 610
RG C G+C C GF G+ C + G CSG GRC C C GY
Sbjct: 381 CHNRGRCVDGRCECDDGFTGADCGELKCPNG--------CSGHGRCVNGQCVCDEGYTGE 432
Query: 611 LCQECPGCPSPCGKYISCAE--CLKFEKGPFGKNCS-AACP-----------GLQLSNNP 656
C + CP+ C C E C+ E+G G +CS +CP G+ + ++
Sbjct: 433 DCSQL-RCPNDCHSRGRCVEGKCV-CEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDG 490
Query: 657 VKGRTCKER 665
G C++R
Sbjct: 491 YTGEDCRDR 499
Score = 70.1 bits (170), Expect = 7e-12
Identities = 58/192 (30%), Positives = 73/192 (38%), Gaps = 40/192 (20%)
Query: 459 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCL 518
CH +G G C CD G+ G++C + +C D C+ G CV G C+
Sbjct: 194 CHLRGRCIDGQCICDDGFTGEDCS-----------QLACPSD-----CNDQGKCVNGVCI 237
Query: 519 CHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERT 578
C + Y D C R V G C G C CH GF G C
Sbjct: 238 C----------FEGYAGAD---CSREICPVPCSEEHGTCVDGLCVCHDGFAGDDC----N 280
Query: 579 TEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISCAECLKF-EKG 637
CLN C RGRC N C C G+ C E CP+ C C + E+G
Sbjct: 281 KPLCLN----NCYNRGRCVENECVCDEGFTGEDCSELI-CPNDCFDRGRCINGTCYCEEG 335
Query: 638 PFGKNC-SAACP 648
G++C CP
Sbjct: 336 FTGEDCGKPTCP 347
Score = 43.1 bits (100), Expect = 0.001
Identities = 33/93 (35%), Positives = 39/93 (41%), Gaps = 14/93 (15%)
Query: 559 CGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGC 618
CG C C PG++G C E G C RGRC C C G+ C + C
Sbjct: 172 CG-CVCEPGWKGPNCS-EPECPG-------NCHLRGRCIDGQCICDDGFTGEDCSQL-AC 221
Query: 619 PSPCGKYISCAE--CLKFEKGPFGKNCS-AACP 648
PS C C C+ FE G G +CS CP
Sbjct: 222 PSDCNDQGKCVNGVCICFE-GYAGADCSREICP 253
>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
Length = 2725
Score = 82.0 bits (201), Expect = 2e-15
Identities = 65/222 (29%), Positives = 84/222 (37%), Gaps = 50/222 (22%)
Query: 446 ECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSII 505
EC ++ C G G G+C C GY G+ CE +D +
Sbjct: 588 ECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICE---------------EEDCLDPM 632
Query: 506 CSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCH 565
CS G CV G+C C T G CE C+ + C G G L G C C
Sbjct: 633 CSNHGICVKGECHCSTG------WGGVNCETPLPVCQ----EQCSGHGTFLLDAGVCSCD 682
Query: 566 PGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKY 625
P + GS C E T +EC G C +C+C G+ P C+E C S C ++
Sbjct: 683 PKWTGSDCSTELCT--------MECGSHGVCSRGICQCEEGWVGPTCEE-RSCHSHCTEH 733
Query: 626 ISC----AECLKFEKGPFGKNCSAA---------CPGLQLSN 654
C EC G G +C+ A CPGL N
Sbjct: 734 GQCKDGKCEC---SPGWEGDHCTIAHYLDAVRDGCPGLCFGN 772
Score = 71.2 bits (173), Expect = 3e-12
Identities = 64/234 (27%), Positives = 93/234 (39%), Gaps = 58/234 (24%)
Query: 459 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCL 518
C+G G G C C G++G +C +D+ ++C G G+ G C+
Sbjct: 536 CNGNGECISGHCHCFPGFLGPDCA----------------RDSCPVLCGGNGEYEKGHCV 579
Query: 519 C-HTSDVPGKLIYGQYCECDTINCERYNGQVCGGP---GRGLCFCGKCRCHPGFEGSACQ 574
C H P ECD + C P G G C G C C PG++G C+
Sbjct: 580 CRHGWKGP---------ECDVPE------EQCIDPTCFGHGTCIMGVCICVPGYKGEICE 624
Query: 575 CERTTEGCLNPRRVECSGRGRCRCNVCECHSGY-------QLPLCQE-CPGCPSPCGKYI 626
E CL+P CS G C C C +G+ LP+CQE C G G ++
Sbjct: 625 ----EEDCLDPM---CSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCSG----HGTFL 673
Query: 627 SCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGR-TCKERDSEGCWVAYTLEQQ 679
A + G +CS ++ ++ V R C+ E WV T E++
Sbjct: 674 LDAGVCSCDPKWTGSDCSTELCTMECGSHGVCSRGICQ---CEEGWVGPTCEER 724
Score = 61.6 bits (148), Expect = 3e-09
Identities = 49/154 (31%), Positives = 65/154 (42%), Gaps = 22/154 (14%)
Query: 500 DNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC 559
D+ S C+G G+C+ G C C PG L G C D+ +CGG G
Sbjct: 530 DDCSTNCNGNGECISGHCHC----FPGFL--GPDCARDSCPV------LCGGNGE--YEK 575
Query: 560 GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCP 619
G C C G++G +C+ E C++P C G G C VC C GY+ +C+E
Sbjct: 576 GHCVCRHGWKGP--ECDVPEEQCIDP---TCFGHGTCIMGVCICVPGYKGEICEEEDCLD 630
Query: 620 SPCGKYISC--AECLKFEKGPFGKNCSAACPGLQ 651
C + C EC G G NC P Q
Sbjct: 631 PMCSNHGICVKGEC-HCSTGWGGVNCETPLPVCQ 663
Score = 55.8 bits (133), Expect = 1e-07
Identities = 50/182 (27%), Positives = 65/182 (35%), Gaps = 37/182 (20%)
Query: 449 CRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCE-----CQTQ--GRSSQELEGS----- 496
C ++ +C G G C C TG+ G NCE CQ Q G + L+
Sbjct: 623 CEEEDCLDPMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCD 682
Query: 497 -------CRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVC 549
C + ++ C G C G C C V G CE ER C
Sbjct: 683 PKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWV------GPTCE------ERSCHSHC 730
Query: 550 GGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNV----CECHS 605
G+ C GKC C PG+EG C + + C G GRC + C C
Sbjct: 731 TEHGQ--CKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVCQV 788
Query: 606 GY 607
G+
Sbjct: 789 GW 790
>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
Length = 2731
Score = 82.0 bits (201), Expect = 2e-15
Identities = 65/222 (29%), Positives = 84/222 (37%), Gaps = 50/222 (22%)
Query: 446 ECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSII 505
EC ++ C G G G+C C GY G+ CE +D +
Sbjct: 587 ECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICE---------------EEDCLDPM 631
Query: 506 CSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCH 565
CS G CV G+C C T G CE C+ + C G G L G C C
Sbjct: 632 CSNHGICVKGECHCSTG------WGGVNCETPLPVCQ----EQCSGHGTFLLDAGVCSCD 681
Query: 566 PGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKY 625
P + GS C E T +EC G C +C+C G+ P C+E C S C ++
Sbjct: 682 PKWTGSDCSTELCT--------MECGSHGVCSRGICQCEEGWVGPTCEE-RSCHSHCTEH 732
Query: 626 ISC----AECLKFEKGPFGKNCSAA---------CPGLQLSN 654
C EC G G +C+ A CPGL N
Sbjct: 733 GQCKDGKCEC---SPGWEGDHCTIAHYLDAVRDGCPGLCFGN 771
Score = 71.2 bits (173), Expect = 3e-12
Identities = 64/234 (27%), Positives = 93/234 (39%), Gaps = 58/234 (24%)
Query: 459 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCL 518
C+G G G C C G++G +C +D+ ++C G G+ G C+
Sbjct: 535 CNGNGECISGHCHCFPGFLGPDCA----------------RDSCPVLCGGNGEYEKGHCV 578
Query: 519 C-HTSDVPGKLIYGQYCECDTINCERYNGQVCGGP---GRGLCFCGKCRCHPGFEGSACQ 574
C H P ECD + C P G G C G C C PG++G C+
Sbjct: 579 CRHGWKGP---------ECDVPE------EQCIDPTCFGHGTCIMGVCICVPGYKGEICE 623
Query: 575 CERTTEGCLNPRRVECSGRGRCRCNVCECHSGY-------QLPLCQE-CPGCPSPCGKYI 626
E CL+P CS G C C C +G+ LP+CQE C G G ++
Sbjct: 624 ----EEDCLDPM---CSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCSG----HGTFL 672
Query: 627 SCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGR-TCKERDSEGCWVAYTLEQQ 679
A + G +CS ++ ++ V R C+ E WV T E++
Sbjct: 673 LDAGVCSCDPKWTGSDCSTELCTMECGSHGVCSRGICQ---CEEGWVGPTCEER 723
Score = 61.6 bits (148), Expect = 3e-09
Identities = 49/154 (31%), Positives = 65/154 (42%), Gaps = 22/154 (14%)
Query: 500 DNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC 559
D+ S C+G G+C+ G C C PG L G C D+ +CGG G
Sbjct: 529 DDCSTNCNGNGECISGHCHC----FPGFL--GPDCARDSCPV------LCGGNGE--YEK 574
Query: 560 GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCP 619
G C C G++G +C+ E C++P C G G C VC C GY+ +C+E
Sbjct: 575 GHCVCRHGWKGP--ECDVPEEQCIDP---TCFGHGTCIMGVCICVPGYKGEICEEEDCLD 629
Query: 620 SPCGKYISC--AECLKFEKGPFGKNCSAACPGLQ 651
C + C EC G G NC P Q
Sbjct: 630 PMCSNHGICVKGEC-HCSTGWGGVNCETPLPVCQ 662
Score = 55.8 bits (133), Expect = 1e-07
Identities = 50/182 (27%), Positives = 65/182 (35%), Gaps = 37/182 (20%)
Query: 449 CRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCE-----CQTQ--GRSSQELEGS----- 496
C ++ +C G G C C TG+ G NCE CQ Q G + L+
Sbjct: 622 CEEEDCLDPMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCD 681
Query: 497 -------CRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVC 549
C + ++ C G C G C C V G CE ER C
Sbjct: 682 PKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWV------GPTCE------ERSCHSHC 729
Query: 550 GGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNV----CECHS 605
G+ C GKC C PG+EG C + + C G GRC + C C
Sbjct: 730 TEHGQ--CKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVCQV 787
Query: 606 GY 607
G+
Sbjct: 788 GW 789
>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
Length = 2732
Score = 82.0 bits (201), Expect = 2e-15
Identities = 65/222 (29%), Positives = 84/222 (37%), Gaps = 50/222 (22%)
Query: 446 ECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSII 505
EC ++ C G G G+C C GY G+ CE +D +
Sbjct: 588 ECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICE---------------EEDCLDPM 632
Query: 506 CSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCH 565
CS G CV G+C C T G CE C+ + C G G L G C C
Sbjct: 633 CSNHGICVKGECHCSTG------WGGVNCETPLPVCQ----EQCSGHGTFLLDAGVCSCD 682
Query: 566 PGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKY 625
P + GS C E T +EC G C +C+C G+ P C+E C S C ++
Sbjct: 683 PKWTGSDCSTELCT--------MECGSHGVCSRGICQCEEGWVGPTCEE-RSCHSHCTEH 733
Query: 626 ISC----AECLKFEKGPFGKNCSAA---------CPGLQLSN 654
C EC G G +C+ A CPGL N
Sbjct: 734 GQCKDGKCEC---SPGWEGDHCTIAHYLDAVRDGCPGLCFGN 772
Score = 71.2 bits (173), Expect = 3e-12
Identities = 64/234 (27%), Positives = 93/234 (39%), Gaps = 58/234 (24%)
Query: 459 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCL 518
C+G G G C C G++G +C +D+ ++C G G+ G C+
Sbjct: 536 CNGNGECISGHCHCFPGFLGPDCA----------------RDSCPVLCGGNGEYEKGHCV 579
Query: 519 C-HTSDVPGKLIYGQYCECDTINCERYNGQVCGGP---GRGLCFCGKCRCHPGFEGSACQ 574
C H P ECD + C P G G C G C C PG++G C+
Sbjct: 580 CRHGWKGP---------ECDVPE------EQCIDPTCFGHGTCIMGVCICVPGYKGEICE 624
Query: 575 CERTTEGCLNPRRVECSGRGRCRCNVCECHSGY-------QLPLCQE-CPGCPSPCGKYI 626
E CL+P CS G C C C +G+ LP+CQE C G G ++
Sbjct: 625 ----EEDCLDPM---CSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCSG----HGTFL 673
Query: 627 SCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGR-TCKERDSEGCWVAYTLEQQ 679
A + G +CS ++ ++ V R C+ E WV T E++
Sbjct: 674 LDAGVCSCDPKWTGSDCSTELCTMECGSHGVCSRGICQ---CEEGWVGPTCEER 724
Score = 61.6 bits (148), Expect = 3e-09
Identities = 49/154 (31%), Positives = 65/154 (42%), Gaps = 22/154 (14%)
Query: 500 DNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC 559
D+ S C+G G+C+ G C C PG L G C D+ +CGG G
Sbjct: 530 DDCSTNCNGNGECISGHCHC----FPGFL--GPDCARDSCPV------LCGGNGE--YEK 575
Query: 560 GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCP 619
G C C G++G +C+ E C++P C G G C VC C GY+ +C+E
Sbjct: 576 GHCVCRHGWKGP--ECDVPEEQCIDP---TCFGHGTCIMGVCICVPGYKGEICEEEDCLD 630
Query: 620 SPCGKYISC--AECLKFEKGPFGKNCSAACPGLQ 651
C + C EC G G NC P Q
Sbjct: 631 PMCSNHGICVKGEC-HCSTGWGGVNCETPLPVCQ 663
Score = 55.8 bits (133), Expect = 1e-07
Identities = 50/182 (27%), Positives = 65/182 (35%), Gaps = 37/182 (20%)
Query: 449 CRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCE-----CQTQ--GRSSQELEGS----- 496
C ++ +C G G C C TG+ G NCE CQ Q G + L+
Sbjct: 623 CEEEDCLDPMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCD 682
Query: 497 -------CRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVC 549
C + ++ C G C G C C V G CE ER C
Sbjct: 683 PKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWV------GPTCE------ERSCHSHC 730
Query: 550 GGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNV----CECHS 605
G+ C GKC C PG+EG C + + C G GRC + C C
Sbjct: 731 TEHGQ--CKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVCQV 788
Query: 606 GY 607
G+
Sbjct: 789 GW 790
>gi|111125011 WNT inhibitory factor 1 precursor [Homo sapiens]
Length = 379
Score = 74.3 bits (181), Expect = 4e-13
Identities = 61/192 (31%), Positives = 82/192 (42%), Gaps = 45/192 (23%)
Query: 459 CHGKGFL-ECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQ 516
C GF E IC C G+ G +CE + C C G CV G
Sbjct: 186 CRNGGFCNERRICECPDGFHGPHCE-----------KALCTPR-----CMNGGLCVTPGF 229
Query: 517 CLCHTSDVPGKLIYGQYCECDTINCER--YNGQVCGGPGRGLCFCGKCRCHPGFEGSACQ 574
C+C PG YG CD NC +NG C PG KC C PG EG C+
Sbjct: 230 CICP----PG--FYG--VNCDKANCSTTCFNGGTCFYPG-------KCICPPGLEGEQCE 274
Query: 575 CERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISCAECLK- 633
+ + C N + C G+ +C+C+ GYQ LC + P C CG + +C E K
Sbjct: 275 ISKCPQPCRNGGK--CIGKSKCKCS-----KGYQGDLCSK-PVCEPGCGAHGTCHEPNKC 326
Query: 634 -FEKGPFGKNCS 644
++G G++C+
Sbjct: 327 QCQEGWHGRHCN 338
>gi|157384973 tenascin R [Homo sapiens]
Length = 1358
Score = 73.9 bits (180), Expect = 5e-13
Identities = 62/195 (31%), Positives = 76/195 (38%), Gaps = 51/195 (26%)
Query: 444 QCECRCRDQSRDRSL------CHGKG---FLECGICRCDTGYIGKNCECQTQGRSSQELE 494
QC C +S C G G F CG C C+ G+ GKNC E
Sbjct: 154 QCNANCCQESAATGQLDYIPHCSGHGNFSFESCG-CICNEGWFGKNCS-----------E 201
Query: 495 GSCRKDNNSIICSGLGDCVCGQCLC---HTSDVPGKLIYGQYCE----CDTINC---ERY 544
C + CS G CV GQC+C ++ D +L C C C E Y
Sbjct: 202 PYC-----PLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCSSRGLCVDGECVCEEPY 256
Query: 545 NGQVCGG-------PGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCR 597
G+ C G+G C G C C G+ G C + CLN CSGRG+C
Sbjct: 257 TGEDCRELRCPGDCSGKGRCANGTCLCEEGYVGEDCGQRQ----CLNA----CSGRGQCE 308
Query: 598 CNVCECHSGYQLPLC 612
+C C GYQ P C
Sbjct: 309 EGLCVCEEGYQGPDC 323
Score = 55.1 bits (131), Expect = 2e-07
Identities = 55/194 (28%), Positives = 70/194 (36%), Gaps = 36/194 (18%)
Query: 479 KNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCE--- 535
K C C + + QEL + S L D C C S G+L Y +C
Sbjct: 123 KACPCASSAQVLQELLSRIEMLEREV--SVLRDQCNANC-CQESAATGQLDYIPHCSGHG 179
Query: 536 ------CDTINCERYNGQVCGGP-------GRGLCFCGKCRCHPGFEGSACQCERTTEGC 582
C I E + G+ C P RG+C G+C C + G C R
Sbjct: 180 NFSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCP--- 236
Query: 583 LNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISCAE--CLKFEKGPFG 640
+CS RG C C C Y C+E CP C CA CL E+G G
Sbjct: 237 -----TDCSSRGLCVDGECVCEEPYTGEDCREL-RCPGDCSGKGRCANGTCL-CEEGYVG 289
Query: 641 KNCSA-----ACPG 649
++C AC G
Sbjct: 290 EDCGQRQCLNACSG 303
>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
Length = 2769
Score = 73.6 bits (179), Expect = 7e-13
Identities = 68/256 (26%), Positives = 93/256 (36%), Gaps = 82/256 (32%)
Query: 457 SLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQ 516
S C+G G G C C G++G +C GR+S C ++CSG G + G+
Sbjct: 568 SNCYGNGDCISGTCHCFLGFLGPDC-----GRAS------C-----PVLCSGNGQYMKGR 611
Query: 517 CLCHTS------DVPGKLIYGQYCE----CDTINC---ERYNGQVCGG--------PGRG 555
CLCH+ DVP C C T C Y G+ C GRG
Sbjct: 612 CLCHSGWKGAECDVPTNQCIDVACSNHGTCITGTCICNPGYKGESCEEVDCMDPTCSGRG 671
Query: 556 LCFCGKCRCHPGFEGSACQCERTT-------EGCLNPR--------------------RV 588
+C G+C C G+ G+ C+ R T G P
Sbjct: 672 VCVRGECHCSVGWGGTNCETPRATCLDQCSGHGTFLPDTGLCSCDPSWTGHDCSIEICAA 731
Query: 589 ECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISC----AECLKFEKGPFGKNCS 644
+C G G C C C G+ C + C C ++ +C EC G G++C+
Sbjct: 732 DCGGHGVCVGGTCRCEDGWMGAACDQ-RACHPRCAEHGTCRDGKCEC---SPGWNGEHCT 787
Query: 645 AA----------CPGL 650
A CPGL
Sbjct: 788 IAHYLDRVVKEGCPGL 803
Score = 59.3 bits (142), Expect = 1e-08
Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 22/146 (15%)
Query: 500 DNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC 559
DN C G GDC+ G C C + +C +C +C G G+ +
Sbjct: 564 DNCPSNCYGNGDCISGTCHCFLGFLGP--------DCGRASCP----VLCSGNGQYM--K 609
Query: 560 GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCP 619
G+C CH G++G+ +C+ T C++ V CS G C C C+ GY+ C+E
Sbjct: 610 GRCLCHSGWKGA--ECDVPTNQCID---VACSNHGTCITGTCICNPGYKGESCEEVDCMD 664
Query: 620 SPCGKYISC--AECLKFEKGPFGKNC 643
C C EC G G NC
Sbjct: 665 PTCSGRGVCVRGEC-HCSVGWGGTNC 689
Score = 55.5 bits (132), Expect = 2e-07
Identities = 43/163 (26%), Positives = 56/163 (34%), Gaps = 43/163 (26%)
Query: 455 DRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC 514
D+ HG + G+C CD + G +C + C D C G G CV
Sbjct: 698 DQCSGHGTFLPDTGLCSCDPSWTGHDCSIEI-----------CAAD-----CGGHGVCVG 741
Query: 515 GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQ 574
G C C CD C + G C GKC C PG+ G C
Sbjct: 742 GTCRCEDG--------WMGAACDQRACHPRCAE------HGTCRDGKCECSPGWNGEHCT 787
Query: 575 CER-----TTEGCLNPRRVECSGRGRCRCNV----CECHSGYQ 608
EGC C+G GRC ++ C C G++
Sbjct: 788 IAHYLDRVVKEGCPG----LCNGNGRCTLDLNGWHCVCQLGWR 826
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 71.2 bits (173), Expect = 3e-12
Identities = 69/265 (26%), Positives = 92/265 (34%), Gaps = 66/265 (24%)
Query: 442 LPQCECRCRDQSRDRSLCHGKGFLEC---------GICRCDTGYIGKNCECQTQGRSSQE 492
+P C R Q + + +G C G CRC GY G NC+ + ++
Sbjct: 61 VPTCCAGWRQQGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDT----KCPRQ 116
Query: 493 LEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGP 552
G K+ S G + V GQC CH + + C+C C +G P
Sbjct: 117 FWGPDCKELCSCHPHGQCEDVTGQCTCHARRWGARCEHA--CQCQHGTCHPRSGACRCEP 174
Query: 553 G------RGLCFC----------GKCRCHPGFEGSA------------------CQCERT 578
G C+C G C CH G+ G + CQC
Sbjct: 175 GWWGAQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPCEQQSGRCQCRER 234
Query: 579 TEGCLNPRRVECSGRGRCR--CNVCECHSGYQLPLCQE-CP------GCPSPCGK----- 624
T G R +C RGRC C C GY+ C+E CP GC CG+
Sbjct: 235 TFGARCDRYCQCF-RGRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQ 293
Query: 625 --YISCAECLKFEKGPFGKNCSAAC 647
++ CL E G G C C
Sbjct: 294 PCTVAEGRCLTCEPGWNGTKCDQPC 318
Score = 33.1 bits (74), Expect = 1.00
Identities = 36/146 (24%), Positives = 49/146 (33%), Gaps = 42/146 (28%)
Query: 472 CDTGYIGKNCECQT----QGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGK 527
C TG+ G+ C + G + + G C + N +GD C T G
Sbjct: 318 CATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCN----AGWIGD------RCETKCSNGT 367
Query: 528 LIYGQYCECDTINCERYNGQVCGGPGRGLCF--CGKCRCHPGFEGSACQ--CERTTEGCL 583
YG+ C VC G G C G+C C PG G C C G
Sbjct: 368 --YGEDCAF-----------VCADCGSGHCDFQSGRCLCSPGVHGPHCNVTCPPGLHG-- 412
Query: 584 NPRRVECSGRGRCRCNVCE-----CH 604
+C+ C + C+ CH
Sbjct: 413 ----ADCAQACSCHEDTCDPVTGACH 434
Score = 31.2 bits (69), Expect = 3.8
Identities = 37/144 (25%), Positives = 53/144 (36%), Gaps = 43/144 (29%)
Query: 445 CECRCRDQSRDRSLCHGKGFLECGIC-RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNS 503
C RC RD C+ G C RC+ G+IG CE + + E + +
Sbjct: 327 CSHRC-PPCRDGHACNHV----TGKCTRCNAGWIGDRCETKCSNGTYGE--------DCA 373
Query: 504 IICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC 559
+C+ G C G+CLC PG ++G +C + C PG C
Sbjct: 374 FVCADCGSGHCDFQSGRCLCS----PG--VHGPHC---NVTCP---------PGLHGADC 415
Query: 560 GK-CRCHPGFEGSACQCERTTEGC 582
+ C CH C+ T C
Sbjct: 416 AQACSCHED------TCDPVTGAC 433
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 71.2 bits (173), Expect = 3e-12
Identities = 69/265 (26%), Positives = 92/265 (34%), Gaps = 66/265 (24%)
Query: 442 LPQCECRCRDQSRDRSLCHGKGFLEC---------GICRCDTGYIGKNCECQTQGRSSQE 492
+P C R Q + + +G C G CRC GY G NC+ + ++
Sbjct: 61 VPTCCAGWRQQGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDT----KCPRQ 116
Query: 493 LEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGP 552
G K+ S G + V GQC CH + + C+C C +G P
Sbjct: 117 FWGPDCKELCSCHPHGQCEDVTGQCTCHARRWGARCEHA--CQCQHGTCHPRSGACRCEP 174
Query: 553 G------RGLCFC----------GKCRCHPGFEGSA------------------CQCERT 578
G C+C G C CH G+ G + CQC
Sbjct: 175 GWWGAQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPCEQQSGRCQCRER 234
Query: 579 TEGCLNPRRVECSGRGRCR--CNVCECHSGYQLPLCQE-CP------GCPSPCGK----- 624
T G R +C RGRC C C GY+ C+E CP GC CG+
Sbjct: 235 TFGARCDRYCQCF-RGRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQ 293
Query: 625 --YISCAECLKFEKGPFGKNCSAAC 647
++ CL E G G C C
Sbjct: 294 PCTVAEGRCLTCEPGWNGTKCDQPC 318
Score = 33.1 bits (74), Expect = 1.00
Identities = 36/146 (24%), Positives = 49/146 (33%), Gaps = 42/146 (28%)
Query: 472 CDTGYIGKNCECQT----QGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGK 527
C TG+ G+ C + G + + G C + N +GD C T G
Sbjct: 318 CATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCN----AGWIGD------RCETKCSNGT 367
Query: 528 LIYGQYCECDTINCERYNGQVCGGPGRGLCF--CGKCRCHPGFEGSACQ--CERTTEGCL 583
YG+ C VC G G C G+C C PG G C C G
Sbjct: 368 --YGEDCAF-----------VCADCGSGHCDFQSGRCLCSPGVHGPHCNVTCPPGLHG-- 412
Query: 584 NPRRVECSGRGRCRCNVCE-----CH 604
+C+ C + C+ CH
Sbjct: 413 ----ADCAQACSCHEDTCDPVTGACH 434
Score = 31.2 bits (69), Expect = 3.8
Identities = 37/144 (25%), Positives = 53/144 (36%), Gaps = 43/144 (29%)
Query: 445 CECRCRDQSRDRSLCHGKGFLECGIC-RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNS 503
C RC RD C+ G C RC+ G+IG CE + + E + +
Sbjct: 327 CSHRC-PPCRDGHACNHV----TGKCTRCNAGWIGDRCETKCSNGTYGE--------DCA 373
Query: 504 IICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC 559
+C+ G C G+CLC PG ++G +C + C PG C
Sbjct: 374 FVCADCGSGHCDFQSGRCLCS----PG--VHGPHC---NVTCP---------PGLHGADC 415
Query: 560 GK-CRCHPGFEGSACQCERTTEGC 582
+ C CH C+ T C
Sbjct: 416 AQACSCHED------TCDPVTGAC 433
>gi|181336739 multiple EGF-like-domains 11 [Homo sapiens]
Length = 1044
Score = 70.5 bits (171), Expect = 6e-12
Identities = 71/250 (28%), Positives = 88/250 (35%), Gaps = 51/250 (20%)
Query: 444 QCECRCRDQSRDRSLCHGKGF-LECGICRCDTGYIGKNC-ECQTQGRSSQELEGSCRKDN 501
Q C+CR HG G C C GY G C E G E C N
Sbjct: 186 QLPCQCR---------HGASCDPRAGECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQN 236
Query: 502 NSIICSGLGDCVCGQ----CLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLC 557
G+C C +C PG +GQ C D C ++G C
Sbjct: 237 GGTCHHITGECACPPGWTGAVCAQPCPPG--TFGQNCSQD---CPCHHGGQCDH------ 285
Query: 558 FCGKCRCHPGFEGSACQ--CERTTEGCLNPRRVECSGRGRC--RCNVCECHSGYQLPLCQ 613
G+C C G+ G CQ C + G + +C G+C CEC GY+ P CQ
Sbjct: 286 VTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDCHNGGQCSPTTGACECEPGYKGPRCQ 345
Query: 614 E--C------PGCPSPC----GKYISC---AECLKFEKGPFGKNCSAACP------GLQL 652
E C PGC PC ISC + G G +C+ +CP G QL
Sbjct: 346 ERLCPEGLHGPGCTLPCPCDADNTISCHPVTGACTCQPGWSGHHCNESCPVGYYGDGCQL 405
Query: 653 SNNPVKGRTC 662
G C
Sbjct: 406 PCTCQNGADC 415
Score = 59.7 bits (143), Expect = 1e-08
Identities = 61/217 (28%), Positives = 76/217 (35%), Gaps = 60/217 (27%)
Query: 468 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC--------VCGQCLC 519
G C C G++G CE C + CS DC V G C C
Sbjct: 506 GSCSCTPGWLGDTCELP------------CPDGTFGLNCSEHCDCSHADGCDPVTGHCCC 553
Query: 520 ---------HTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEG 570
++ PG+ +G C +++C NG C G C C PGF G
Sbjct: 554 LAGWTGIRCDSTCPPGR--WGPNC---SVSCSCENGGSCSPED------GSCECAPGFRG 602
Query: 571 SACQ--CER--TTEGCLNPRRVECSGRGRCR--CNVCECHSGYQLPLC-QECPG--CPSP 621
CQ C GC P + C +CEC G+ LC Q C G
Sbjct: 603 PLCQRICPPGFYGHGCAQPCPLCVHSSRPCHHISGICECLPGFSGALCNQVCAGGYFGQD 662
Query: 622 CGKYISCA----------ECLKFEKGPFGKNCSAACP 648
C + SCA C F G GK+CS ACP
Sbjct: 663 CAQLCSCANNGTCSPIDGSCQCF-PGWIGKDCSQACP 698
Score = 57.4 bits (137), Expect = 5e-08
Identities = 76/287 (26%), Positives = 99/287 (34%), Gaps = 76/287 (26%)
Query: 430 ALGFTDIVTVQVLP------QCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNC-E 482
A G+T + ++ P CE RC Q+ CH G C C G+ G C +
Sbjct: 207 APGYTGVYCEELCPPGSHGAHCELRCPCQNG--GTCHHI----TGECACPPGWTGAVCAQ 260
Query: 483 CQTQGRSSQELEGSCRKDNNSIICSGLGDC--VCGQCLCHTSDVPG-----KLIYGQYCE 535
G Q C C G C V GQC C T+ G + +G +
Sbjct: 261 PCPPGTFGQNCSQDCP-------CHHGGQCDHVTGQCHC-TAGYMGDRCQEECPFGSFGF 312
Query: 536 CDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNP---RRVECSG 592
+ +C+ +NG C G C C PG++G CQ EG P C
Sbjct: 313 QCSQHCDCHNGGQCSPT------TGACECEPGYKGPRCQERLCPEGLHGPGCTLPCPCDA 366
Query: 593 RGRCRCN----VCECHSGYQLPLCQE-CP------GCPSPCGKY-----------ISCAE 630
C+ C C G+ C E CP GC PC +CA
Sbjct: 367 DNTISCHPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAP 426
Query: 631 -------CLKFEKGPFGKNCSAACPGLQLSNN-----PVKGR-TCKE 664
+ G +G NCS+ C NN PV G TCKE
Sbjct: 427 GFMGEVCAVSCAAGTYGPNCSSICS----CNNGGTCSPVDGSCTCKE 469
Score = 55.1 bits (131), Expect = 2e-07
Identities = 48/190 (25%), Positives = 68/190 (35%), Gaps = 42/190 (22%)
Query: 470 CRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCL----CHTSD 523
C C+ G+ G +C C + C+ N ++ G CVC C
Sbjct: 118 CHCEPGWGGPDCSSGCDSD-HWGPHCSNRCQCQNGALCNPITGACVCAAGFRGWRCEELC 176
Query: 524 VPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQ--CERTTEG 581
PG +G+ C+ + C+ +G C G+C C PG+ G C+ C + G
Sbjct: 177 APGT--HGKGCQ---LPCQCRHGASCDPRA------GECLCAPGYTGVYCEELCPPGSHG 225
Query: 582 CLNPRRVECSGRGRCR--CNVCECHSGYQLPLC-QECPGCPSPCGKYISCAECLKFEKGP 638
R C G C C C G+ +C Q CP G
Sbjct: 226 AHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCP-------------------PGT 266
Query: 639 FGKNCSAACP 648
FG+NCS CP
Sbjct: 267 FGQNCSQDCP 276
Score = 40.0 bits (92), Expect = 0.008
Identities = 35/131 (26%), Positives = 44/131 (33%), Gaps = 28/131 (21%)
Query: 466 ECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVP 525
E G C C G+ G C + + G + N C D + G+C C T
Sbjct: 721 EDGACHCTPGWTGLFCTQRCPAAFFGKDCGRVCQCQNGASC----DHISGKCTCRTG--- 773
Query: 526 GKLIYGQYCE-----------CDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQ 574
GQ+CE C + CE N C G C C PGF+G C
Sbjct: 774 ---FTGQHCEQRCAPGTFGYGCQQL-CECMNNSTCDH------VTGTCYCSPGFKGIRCD 823
Query: 575 CERTTEGCLNP 585
LNP
Sbjct: 824 QAALMMEELNP 834
Score = 38.9 bits (89), Expect = 0.018
Identities = 46/186 (24%), Positives = 60/186 (32%), Gaps = 32/186 (17%)
Query: 468 GICRCDTGYIGKNC-ECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCL----CHTS 522
GIC C G+ G C + G Q+ C NN G C C C +
Sbjct: 637 GICECLPGFSGALCNQVCAGGYFGQDCAQLCSCANNGTCSPIDGSCQCFPGWIGKDCSQA 696
Query: 523 DVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGC 582
PG +G C C +NG C G C C PG+ G C
Sbjct: 697 CPPG--FWGPAC---FHACSCHNGASCSAED------GACHCTPGWTGLFCT-------- 737
Query: 583 LNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISCAEC-LKFEKGPFGK 641
+R + G+ VC+C +G C G C + C + G FG
Sbjct: 738 ---QRCPAAFFGKDCGRVCQCQNGAS---CDHISG-KCTCRTGFTGQHCEQRCAPGTFGY 790
Query: 642 NCSAAC 647
C C
Sbjct: 791 GCQQLC 796
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 68.6 bits (166), Expect = 2e-11
Identities = 61/228 (26%), Positives = 78/228 (34%), Gaps = 66/228 (28%)
Query: 459 CHGKGFLECGICRCDTGYIGKNCE-------CQTQGRSSQEL--------EGSCRKDNNS 503
CHG G G+C C G++G +C C G+ S+ C N
Sbjct: 580 CHGNGECVSGVCHCFPGFLGADCAKAACPVLCSGNGQYSKGTCQCYSGWKGAECDVPMNQ 639
Query: 504 II---CSGLGDCVCGQCLC-------HTSDVP---------GKLIYGQYCECDT----IN 540
I C G G C+ G C+C H +V G + G+ C C +N
Sbjct: 640 CIDPSCGGHGSCIDGNCVCSAGYKGEHCEEVDCLDPTCSSHGVCVNGE-CLCSPGWGGLN 698
Query: 541 CERYNGQV---CGGPGRGLCFCGKCRCHPGFE--------------------GSACQCER 577
CE Q C G G L G C C P + G AC+CE
Sbjct: 699 CELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCGTHGVCIGGACRCEE 758
Query: 578 TTEGCLNPRRV---ECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPC 622
G +RV C G C+ CEC G+ C GCP C
Sbjct: 759 GWTGAACDQRVCHPRCIEHGTCKDGKCECREGWNGEHC-TIDGCPDLC 805
Score = 55.5 bits (132), Expect = 2e-07
Identities = 46/172 (26%), Positives = 63/172 (36%), Gaps = 43/172 (25%)
Query: 445 CECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSI 504
CE R Q D+ HG + G+C CD ++G +C + C S+
Sbjct: 699 CEL-ARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEV-----------C-----SV 741
Query: 505 ICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRC 564
C G C+ G C C G + C I G C GKC C
Sbjct: 742 DCGTHGVCIGGACRCE-EGWTGAACDQRVCHPRCIE-------------HGTCKDGKCEC 787
Query: 565 HPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCN----VCECHSGYQLPLC 612
G+ G C T +GC + C+G GRC C C +G++ P C
Sbjct: 788 REGWNGEHC----TIDGCPD----LCNGNGRCTLGQNSWQCVCQTGWRGPGC 831
>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
Length = 1541
Score = 67.0 bits (162), Expect = 6e-11
Identities = 71/249 (28%), Positives = 92/249 (36%), Gaps = 48/249 (19%)
Query: 451 DQSRDRSLCHGKGFLE--CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSG 508
D R LC G + G C C G+ G CE + R ++ CR + + G
Sbjct: 1040 DNCRHSCLCQNGGTCDPVSGHCACPEGWAGLACEKECLPR---DVRAGCRH-SGGCLNGG 1095
Query: 509 LGDCVCGQCLCHTSDVPGKL----IYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRC 564
L D G+CLC K + G + E C G C G CRC
Sbjct: 1096 LCDPHTGRCLCPAGWTGDKCQSPCLRGWFGEACAQRCSCPPGAACHH------VTGACRC 1149
Query: 565 HPGFEGSACQ--CERTTEGCLNPRRVECSGRGRC---RCNVCECHSGYQLPLCQE-C--- 615
PGF GS C+ C + G + +C G C C +GY P CQ+ C
Sbjct: 1150 PPGFTGSGCEQACPPGSFGEDCAQMCQCPGENPACHPATGTCSCAAGYHGPSCQQRCPPG 1209
Query: 616 ---PGCPSPCG--KYISC---------------AEC-LKFEKGPFGKNCSAACP-GLQLS 653
PGC CG SC +C L +G FG NC+ C G +
Sbjct: 1210 RYGPGCEQLCGCLNGGSCDAATGACRCPTGFLGTDCNLTCPQGRFGPNCTHVCGCGQGAA 1269
Query: 654 NNPVKGRTC 662
+PV G TC
Sbjct: 1270 CDPVTG-TC 1277
Score = 61.2 bits (147), Expect = 3e-09
Identities = 69/220 (31%), Positives = 82/220 (37%), Gaps = 65/220 (29%)
Query: 468 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC--VCGQCLCHTSDVP 525
G CRC G G NCE G CRK N C+ G C + G CLC P
Sbjct: 581 GACRCPPGVSGTNCE---DGCPKGYYGKHCRKKCN---CANRGRCHRLYGACLCD----P 630
Query: 526 GKLIYGQYCECDTINCERYNGQVCGGPGRGL-CFC------------GKCRCHPGFEGSA 572
G +YG++C + C + GPG C C G C C GF G
Sbjct: 631 G--LYGRFCH---LTCPPW----AFGPGCSEECQCVQPHTQSCDKRDGSCSCKAGFRGER 681
Query: 573 CQCE--------RTTEGCLNPRRVEC-SGRGRCRCNVCECHSGYQLPLC-QECP------ 616
CQ E + C P V C S G C C +G+Q C QECP
Sbjct: 682 CQAECELGYFGPGCWQACTCPVGVACDSVSGECG---KRCPAGFQGEDCGQECPVGTFGV 738
Query: 617 GCPSPCGKYISC--AEC------LKFEKGPFGKNCSAACP 648
C S C SC A C + G G++C A CP
Sbjct: 739 NCSSSC----SCGGAPCHGVTGQCRCPPGRTGEDCEADCP 774
Score = 58.9 bits (141), Expect = 2e-08
Identities = 63/232 (27%), Positives = 78/232 (33%), Gaps = 89/232 (38%)
Query: 445 CECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQ-GRSSQELEGSCRKDNNS 503
CE C R+ LCH G C C G+ G++CE GR C NNS
Sbjct: 1301 CEHTC--SCRNGGLCHASN----GSCSCGLGWTGRHCELACPPGRYGAACHLECSCHNNS 1354
Query: 504 IICSGLGDCVCGQCLCHTSDVPGKLIYGQYCE--CDTINCERYNGQVCGGPGRGLCFC-- 559
G C CG PG YGQ CE C ++G C +GLC+C
Sbjct: 1355 TCEPATGTCRCG---------PG--FYGQACEHPCPP----GFHGAGC----QGLCWCQH 1395
Query: 560 --------GKCRCHPGFEGSACQ--CERTT--EGCLNPRRVECSGRGRC----------- 596
G+C C GF G C+ CE + EGC +R +C G C
Sbjct: 1396 GAPCDPISGRCLCPAGFHGHFCERGCEPGSFGEGC--HQRCDCDGGAPCDPVTGLCLCPP 1453
Query: 597 -----RCNV-----------------------------CECHSGYQLPLCQE 614
CN+ C C GY P C+E
Sbjct: 1454 GRSGATCNLDCRRGQFGPSCTLHCDCGGGADCDPVSGQCHCVDGYMGPTCRE 1505
Score = 56.6 bits (135), Expect = 8e-08
Identities = 63/229 (27%), Positives = 79/229 (34%), Gaps = 48/229 (20%)
Query: 468 GICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCL----CHT 521
G C C G G CE C Q R E +C N + + G C CG C
Sbjct: 1275 GTCLCPPGRAGVRCERGCP-QNRFGVGCEHTCSCRNGGLCHASNGSCSCGLGWTGRHCEL 1333
Query: 522 SDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQ--CERTT 579
+ PG+ YG C + C +N C G CRC PGF G AC+ C
Sbjct: 1334 ACPPGR--YGAACH---LECSCHNNSTCEPA------TGTCRCGPGFYGQACEHPCPPGF 1382
Query: 580 EG------CLNPRRVECSG-RGRCRC------NVCE--CHSGYQLPLCQECPGCP--SPC 622
G C C GRC C + CE C G C + C +PC
Sbjct: 1383 HGAGCQGLCWCQHGAPCDPISGRCLCPAGFHGHFCERGCEPGSFGEGCHQRCDCDGGAPC 1442
Query: 623 GKYISCAEC----------LKFEKGPFGKNCSAACP-GLQLSNNPVKGR 660
C L +G FG +C+ C G +PV G+
Sbjct: 1443 DPVTGLCLCPPGRSGATCNLDCRRGQFGPSCTLHCDCGGGADCDPVSGQ 1491
Score = 56.2 bits (134), Expect = 1e-07
Identities = 62/210 (29%), Positives = 71/210 (33%), Gaps = 44/210 (20%)
Query: 466 ECGICRCDTGYIGKNC--ECQTQGRSSQELEGSCRKDNNSIICSGLGDC--VCGQCLCHT 521
ECG RC G+ G++C EC G SC C G C V GQC C
Sbjct: 713 ECGK-RCPAGFQGEDCGQECPV-GTFGVNCSSSCS-------CGG-APCHGVTGQCRCP- 761
Query: 522 SDVPGKLIYGQYCECDT------INCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQ- 574
PG+ G+ CE D + C+ C R G C C PGF GS CQ
Sbjct: 762 ---PGRT--GEDCEADCPEGRWGLGCQEIC-PACQHAARCDPETGACLCLPGFVGSRCQD 815
Query: 575 -CERTTEGCLNPRRVECSGRGRCR--CNVCECHSGYQLPLCQEC-------PGCPSPCGK 624
C G R C+ G C C C G+ CQ P C PC
Sbjct: 816 VCPAGWYGPSCQTRCSCANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNC 875
Query: 625 YISCAEC------LKFEKGPFGKNCSAACP 648
C E G G C CP
Sbjct: 876 SAGHGSCDAISGLCLCEAGYVGPRCEQQCP 905
Score = 48.9 bits (115), Expect = 2e-05
Identities = 70/306 (22%), Positives = 92/306 (30%), Gaps = 109/306 (35%)
Query: 443 PQCE--CRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQ-TQGRSSQELEGSCRK 499
P C C C S HG G+C C+ GY+G CE Q QG E C+
Sbjct: 867 PDCSHPCNC-------SAGHGSCDAISGLCLCEAGYVGPRCEQQCPQGHFGPGCEQRCQC 919
Query: 500 DNNSIICSGLGDCVC--------------------------------------GQCLC-- 519
+ + G C C G CLC
Sbjct: 920 QHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSACNCTAGAACDAVNGSCLCPA 979
Query: 520 -----HTSDVPGKLIYG----QYCEC-DTINCERYNGQVCGGPG---------------- 553
++ YG Q C C + +C+ +GQ PG
Sbjct: 980 GRRGPRCAETCPAHTYGHNCSQACACFNGASCDPVHGQCHCAPGWMGPSCLQACPAGLYG 1039
Query: 554 ---RGLCFC----------GKCRCHPGFEGSACQCE----------RTTEGCLNPRRVEC 590
R C C G C C G+ G AC+ E R + GCLN +
Sbjct: 1040 DNCRHSCLCQNGGTCDPVSGHCACPEGWAGLACEKECLPRDVRAGCRHSGGCLNGGLCD- 1098
Query: 591 SGRGRCRC------NVCE--CHSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKN 642
GRC C + C+ C G+ C + CP + C + G G
Sbjct: 1099 PHTGRCLCPAGWTGDKCQSPCLRGWFGEACAQRCSCPPGAACHHVTGAC-RCPPGFTGSG 1157
Query: 643 CSAACP 648
C ACP
Sbjct: 1158 CEQACP 1163
Score = 46.2 bits (108), Expect = 1e-04
Identities = 64/263 (24%), Positives = 85/263 (32%), Gaps = 60/263 (22%)
Query: 420 CIQEQSFVIRALGFTDIVTVQVLPQCEC-----------RCRDQSRDRSLCHGKGFLECG 468
C+ + + +G+ + T + C C SLC G G
Sbjct: 83 CVGHERRTVYYMGYRQVYTTEARTVLRCCRGWMQQPDEEGCLSAECSASLCFHGGRCVPG 142
Query: 469 I---CRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVP 525
C C G+ G C+ CR N C G LC P
Sbjct: 143 SAQPCHCPPGFQGPRCQYDVD---------ECRTHNGG--CQHRCVNTPGSYLCECK--P 189
Query: 526 GKLIYGQYCECDTIN-CERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLN 584
G ++ C IN C NG + +C+C PGF Q + C+
Sbjct: 190 GFRLHTDSRTCLAINSCALGNGGCQHHCVQLTITRHRCQCRPGF-----QLQEDGRHCV- 243
Query: 585 PRRVECSGR-GRC--RCNV------CECHSGYQLP---------------LCQECPGCPS 620
RR C+ R G C RC V CECH GYQL L Q GC +
Sbjct: 244 -RRSPCANRNGSCMHRCQVVRGLARCECHVGYQLAADGKACEDVDECAAGLAQCAHGCLN 302
Query: 621 PCGKYISCAECLKFEKGPFGKNC 643
G + C +E G G+ C
Sbjct: 303 TQGSF-KCVCHAGYELGADGRQC 324
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,756,641
Number of Sequences: 37866
Number of extensions: 1766797
Number of successful extensions: 6276
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 3967
Number of HSP's gapped (non-prelim): 1150
length of query: 769
length of database: 18,247,518
effective HSP length: 110
effective length of query: 659
effective length of database: 14,082,258
effective search space: 9280208022
effective search space used: 9280208022
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.