Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 188595670
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens]
(748 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens] 1524 0.0
gi|218931224 choline acetyltransferase isoform 3 [Homo sapiens] 1318 0.0
gi|188595668 choline acetyltransferase isoform 1 [Homo sapiens] 1269 0.0
gi|218931226 choline acetyltransferase isoform 1 [Homo sapiens] 1269 0.0
gi|218931221 choline acetyltransferase isoform 1 [Homo sapiens] 1269 0.0
gi|188595684 choline acetyltransferase isoform 1 [Homo sapiens] 1269 0.0
gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens] 1269 0.0
gi|21618331 carnitine acetyltransferase precursor [Homo sapiens] 476 e-134
gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [H... 262 1e-69
gi|31542325 peroxisomal carnitine O-octanoyltransferase isoform ... 261 1e-69
gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [H... 251 2e-66
gi|221316602 peroxisomal carnitine O-octanoyltransferase isoform... 246 4e-65
gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo s... 246 6e-65
gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo sa... 246 6e-65
gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo s... 246 6e-65
gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo sap... 246 6e-65
gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo sa... 246 6e-65
gi|4503023 carnitine O-palmitoyltransferase precursor [Homo sapi... 243 6e-64
gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo s... 229 9e-60
gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo s... 224 2e-58
gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo sa... 223 4e-58
gi|223468674 carnitine palmitoyltransferase 1B isoform d [Homo s... 150 4e-36
gi|163965366 nascent polypeptide-associated complex alpha subuni... 43 0.001
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens] 42 0.003
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] 42 0.003
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina... 42 0.003
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens] 41 0.005
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 41 0.005
gi|24497589 aristaless related homeobox [Homo sapiens] 40 0.006
gi|18959210 WIRE protein [Homo sapiens] 40 0.006
>gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens]
Length = 748
Score = 1524 bits (3945), Expect = 0.0
Identities = 748/748 (100%), Positives = 748/748 (100%)
Query: 1 MGLRTAKKRGLGGGGKWKREEGGGTRGRREVRPACFLQSGGRGDPGDVGGPAGNPGCSPH 60
MGLRTAKKRGLGGGGKWKREEGGGTRGRREVRPACFLQSGGRGDPGDVGGPAGNPGCSPH
Sbjct: 1 MGLRTAKKRGLGGGGKWKREEGGGTRGRREVRPACFLQSGGRGDPGDVGGPAGNPGCSPH 60
Query: 61 PRAATRPPPLPAHTPAHTPEWCGAASAEAAEPRRAGPHLCIPAPGLTKTPILEKVPRKMA 120
PRAATRPPPLPAHTPAHTPEWCGAASAEAAEPRRAGPHLCIPAPGLTKTPILEKVPRKMA
Sbjct: 61 PRAATRPPPLPAHTPAHTPEWCGAASAEAAEPRRAGPHLCIPAPGLTKTPILEKVPRKMA 120
Query: 121 AKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQ 180
AKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQ
Sbjct: 121 AKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQ 180
Query: 181 QKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLIS 240
QKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLIS
Sbjct: 181 QKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLIS 240
Query: 241 GVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPE 300
GVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPE
Sbjct: 241 GVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPE 300
Query: 301 PEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSE 360
PEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSE
Sbjct: 301 PEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSE 360
Query: 361 WAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANR 420
WAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANR
Sbjct: 361 WAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANR 420
Query: 421 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELPAP 480
WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELPAP
Sbjct: 421 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELPAP 480
Query: 481 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 540
RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ
Sbjct: 481 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 540
Query: 541 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 600
LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL
Sbjct: 541 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 600
Query: 601 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQV 660
KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQV
Sbjct: 601 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQV 660
Query: 661 PTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRD 720
PTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRD
Sbjct: 661 PTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRD 720
Query: 721 LCSLLPPTESKPLATKEKATRPSQGHQP 748
LCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 721 LCSLLPPTESKPLATKEKATRPSQGHQP 748
>gi|218931224 choline acetyltransferase isoform 3 [Homo sapiens]
Length = 666
Score = 1318 bits (3410), Expect = 0.0
Identities = 653/653 (100%), Positives = 653/653 (100%)
Query: 96 GPHLCIPAPGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVS 155
GPHLCIPAPGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVS
Sbjct: 14 GPHLCIPAPGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVS 73
Query: 156 EEQFRKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSS 215
EEQFRKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSS
Sbjct: 74 EEQFRKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSS 133
Query: 216 PAVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYG 275
PAVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYG
Sbjct: 134 PAVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYG 193
Query: 276 LFSSYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRK 335
LFSSYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRK
Sbjct: 194 LFSSYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRK 253
Query: 336 IVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGG 395
IVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGG
Sbjct: 254 IVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGG 313
Query: 396 VELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTE 455
VELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTE
Sbjct: 314 VELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTE 373
Query: 456 HLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYK 515
HLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYK
Sbjct: 374 HLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYK 433
Query: 516 FDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATP 575
FDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATP
Sbjct: 434 FDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATP 493
Query: 576 EALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMC 635
EALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMC
Sbjct: 494 EALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMC 553
Query: 636 KELPEMFMDETYLMSNRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISS 695
KELPEMFMDETYLMSNRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISS
Sbjct: 554 KELPEMFMDETYLMSNRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISS 613
Query: 696 FHSCKETSSSKFAKAVEESLIDMRDLCSLLPPTESKPLATKEKATRPSQGHQP 748
FHSCKETSSSKFAKAVEESLIDMRDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 614 FHSCKETSSSKFAKAVEESLIDMRDLCSLLPPTESKPLATKEKATRPSQGHQP 666
>gi|188595668 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 119 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 178
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
Query: 179 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 238
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
Query: 239 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 298
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
Query: 299 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 358
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
Query: 359 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 418
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
Query: 419 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 478
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
Query: 479 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 538
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
Query: 539 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 598
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
Query: 599 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 658
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
Query: 659 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 718
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
Query: 719 RDLCSLLPPTESKPLATKEKATRPSQGHQP 748
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
>gi|218931226 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 119 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 178
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
Query: 179 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 238
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
Query: 239 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 298
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
Query: 299 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 358
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
Query: 359 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 418
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
Query: 419 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 478
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
Query: 479 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 538
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
Query: 539 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 598
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
Query: 599 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 658
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
Query: 659 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 718
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
Query: 719 RDLCSLLPPTESKPLATKEKATRPSQGHQP 748
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
>gi|218931221 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 119 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 178
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
Query: 179 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 238
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
Query: 239 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 298
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
Query: 299 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 358
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
Query: 359 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 418
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
Query: 419 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 478
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
Query: 479 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 538
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
Query: 539 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 598
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
Query: 599 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 658
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
Query: 659 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 718
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
Query: 719 RDLCSLLPPTESKPLATKEKATRPSQGHQP 748
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
>gi|188595684 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 119 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 178
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
Query: 179 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 238
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
Query: 239 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 298
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
Query: 299 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 358
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
Query: 359 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 418
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
Query: 419 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 478
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
Query: 479 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 538
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
Query: 539 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 598
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
Query: 599 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 658
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
Query: 659 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 718
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
Query: 719 RDLCSLLPPTESKPLATKEKATRPSQGHQP 748
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
>gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 119 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 178
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
Query: 179 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 238
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
Query: 239 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 298
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
Query: 299 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 358
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
Query: 359 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 418
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
Query: 419 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 478
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
Query: 479 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 538
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
Query: 539 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 598
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
Query: 599 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 658
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
Query: 659 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 718
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
Query: 719 RDLCSLLPPTESKPLATKEKATRPSQGHQP 748
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
>gi|21618331 carnitine acetyltransferase precursor [Homo sapiens]
Length = 626
Score = 476 bits (1224), Expect = e-134
Identities = 258/605 (42%), Positives = 382/605 (63%), Gaps = 16/605 (2%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
+ + LP+LPVPPLQQ+L YL+ ++ +VSEE++ ++ +V +F A GG+GE LQ+ L
Sbjct: 30 AHQDALPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLER 89
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
R KT NW+SE+WL YL R + + SSP V+ +Q F QLRFAA LI GVL +
Sbjct: 90 RARKTENWLSEWWLKTAYLQYRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDF 149
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
K ++D+ ++P + L G+PLCM QYY + SS R+PG QDT V+ S P H+
Sbjct: 150 KVMIDNETLPVE----YLGGKPLCMNQYYQILSSCRVPGPKQDT-VSNFSKTKKPPTHIT 204
Query: 306 VACCNQFFVLDVV-INFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEA 364
V QFF LDV + L+ +F QL KI + ++ P+G+LTS+ R+ WA+A
Sbjct: 205 VVHNYQFFELDVYHSDGTPLTADQIFVQLEKIWNSSLQTNKE--PVGILTSNHRNSWAKA 262
Query: 365 RTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHR---ALQLLHGGGYSKNGANRW 421
L+KD NRDS+ I++ I VCLDA D +R A Q+LHGGG N NRW
Sbjct: 263 YNTLIKDKVNRDSVRSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRW 322
Query: 422 YDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELPAPR 481
+DK+LQF+V DG+CG+V EH+ +G +V ++++++ + +L+R+ V LP P+
Sbjct: 323 FDKTLQFIVAEDGSCGLVYEHAAAEGPPIVTLLDYVIEYTKKP--ELVRSPMV-PLPMPK 379
Query: 482 RLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQL 541
+LR+ +PEI+ + + + L ++++LD V F ++GK F K +K SPDAFIQ+ALQL
Sbjct: 380 KLRFNITPEIKSDIEKAKQNLSIMIQDLDITVMVFHHFGKDFPKSEKLSPDAFIQMALQL 439
Query: 542 AFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLLK 601
A+YR++ + TYESAS+R F GR D IRSA+ ++L FV+A+ D ++V +K+ LL+
Sbjct: 440 AYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMDD--SSVTEHQKVELLR 497
Query: 602 DAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQVP 661
A++A YT AI G A D HLL L+ A +P++FMD +Y ++ F LSTSQVP
Sbjct: 498 KAVQAHRGYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFHLSTSQVP 557
Query: 662 TTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDL 721
T+ +GPVVP+GYG CYNP I F +S+++SC ET++++ A +E++L+DMR L
Sbjct: 558 AKTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRAL 617
Query: 722 CSLLP 726
P
Sbjct: 618 LQSHP 622
>gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [Homo
sapiens]
Length = 773
Score = 262 bits (669), Expect = 1e-69
Identities = 197/623 (31%), Positives = 304/623 (48%), Gaps = 45/623 (7%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
S ++ LP+LPVP ++ T+ YLQ +R L+ EE F++ A+ Q F GLG LQ L
Sbjct: 166 SFQTSLPRLPVPAVKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAV--GLGPRLQWYLKL 223
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+ N+VS++W +YL R L VNS+ + P T Q A + I +L Y
Sbjct: 224 KSWWATNYVSDWWEEYIYLRGRGPLMVNSNYYAMDLLYILP-THIQAARAGNAIHAILLY 282
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
+ LD I G S PLC Q+ +F++ R+PG DT+ M + +H++
Sbjct: 283 RRKLDREEIKPIRLLG--STIPLCSAQWERMFNTSRIPGEETDTI-----QHMRDSKHIV 335
Query: 306 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 365
V ++F + + + R L ++ Q+++I+ S + LT+ R WA R
Sbjct: 336 VYHRGRYFKVWLYHDGRLLKPREMEQQMQRILDNTSEPQPGEARLAALTAGDRVPWARCR 395
Query: 366 TVLVKDSTNRDSLDMIERCICLVCLD-APGGVELSDTHRALQ-----LLHGGGYSKNGAN 419
N+ SLD +E+ V LD G D ++ LLHG Y +
Sbjct: 396 QAYFGRGKNKQSLDAVEKAAFFVTLDETEEGYRSEDPDTSMDSYAKSLLHGRCY-----D 450
Query: 420 RWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVS 475
RW+DKS FVV ++G G+ EHS D ++ E+++ + + + D
Sbjct: 451 RWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGDINP 510
Query: 476 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFI 535
+P P RL+W E Q + +S + ++DF + F +GK IKK + SPDAF+
Sbjct: 511 NIPYPTRLQWDIPGECQEVIETSLNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPDAFV 570
Query: 536 QVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASE 595
Q+ALQLA Y+ + TYE++ R F+EGR + +RS T E+ FVRA+ D A +
Sbjct: 571 QLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMVD--PAQTVEQ 628
Query: 596 KLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVL 655
+L L K A +A+TG ID HL L +++ + E P F+ E ++S + L
Sbjct: 629 RLKLFKLASEKHQHMYRLAMTGSGIDRHLFCLYVVSKYLAVESP--FLKE--VLSEPWRL 684
Query: 656 STSQVP-TTTEMFCC------------YGPVVPNGYGACYNPQPETIL-FCISSFHSCKE 701
STSQ P E+F +GPV +GYG Y E ++ F ISS SC E
Sbjct: 685 STSQTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSCPE 744
Query: 702 TSSSKFAKAVEESLIDMRDLCSL 724
T S +F + ++E++ D+ L L
Sbjct: 745 TDSHRFGRHLKEAMTDIITLFGL 767
>gi|31542325 peroxisomal carnitine O-octanoyltransferase isoform 2
[Homo sapiens]
Length = 612
Score = 261 bits (668), Expect = 1e-69
Identities = 182/604 (30%), Positives = 299/604 (49%), Gaps = 24/604 (3%)
Query: 128 ESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLERQ 187
+ LP LPVP L+++L YL+ ++ ++E+++K++ IVQ+F + G+GE L QKLLER
Sbjct: 17 QDSLPSLPVPSLEESLKKYLESVKPFANQEEYKKTEEIVQKFQS--GIGEKLHQKLLERA 74
Query: 188 EKTANWVSEYWLNDMYLNNRLALPVN---SSPAVIFARQHFPGTDDQLRFAASLISGVLS 244
+ NW+ E+WLN YL+ R+ +N + PA F P QL + + L+
Sbjct: 75 KGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLN 134
Query: 245 YKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVA--QNSSIMPEPE 302
Y LL +P ++ PL M Q+ LFS+ ++PG T+D+++ + S P
Sbjct: 135 YWQLLRKEKVPVH----KVGNTPLDMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPN 190
Query: 303 HVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWA 362
H++V C + FV DV+ ++ +L QL I K +E + P I LTS+ R+ WA
Sbjct: 191 HIVVLCRGRAFVFDVIHEGCLVTPPELLRQLTYIHKKCHSEPDG-PGIAALTSEERTRWA 249
Query: 363 EARTVLVK-DSTNRDSLDMIERCICLVCL-DAPGGVELSDTHRALQLLHGGGYSKNGANR 420
+AR L+ D N L+ I+ + + + D+ V D + + G + R
Sbjct: 250 KAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILIG----DPTVR 305
Query: 421 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELPAP 480
W DKS + +G G C+H+PFD +++V + ++ + + Q+ + ++ V ++P P
Sbjct: 306 WGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNISYYVDEKIFQNEGRWKGSEKVRDIPLP 365
Query: 481 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 540
L + ++ + + + R +L Y F ++GK K + PD FIQ+ALQ
Sbjct: 366 EELIFIVDEKVLNDINQAKAQYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQ 425
Query: 541 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 600
LA+YRLH YE+A R F GR + +RS T EA+ + +++ D +V E+ +
Sbjct: 426 LAYYRLHGHPGCCYETAMTRHFYHGRTETMRSCTVEAVRWCQSMQD--PSVNLRERQQKM 483
Query: 601 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMS---NRFVLST 657
A G D HLL L +A+ +PE+F D + S FVLST
Sbjct: 484 LQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAKEEGLPVPELFTDPLFSKSGGGGNFVLST 543
Query: 658 SQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLID 717
S V P+V NGYG Y+ + + + S++ SC ET + K + + D
Sbjct: 544 SLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRFVVACSAWKSCPETDAEKLVQLTFCAFHD 602
Query: 718 MRDL 721
M L
Sbjct: 603 MIQL 606
>gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [Homo
sapiens]
Length = 756
Score = 251 bits (640), Expect = 2e-66
Identities = 191/601 (31%), Positives = 291/601 (48%), Gaps = 45/601 (7%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
S ++ LP+LPVP ++ T+ YLQ +R L+ EE F++ A+ Q F GLG LQ L
Sbjct: 166 SFQTSLPRLPVPAVKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAV--GLGPRLQWYLKL 223
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+ N+VS++W +YL R L VNS+ + P T Q A + I +L Y
Sbjct: 224 KSWWATNYVSDWWEEYIYLRGRGPLMVNSNYYAMDLLYILP-THIQAARAGNAIHAILLY 282
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
+ LD I G S PLC Q+ +F++ R+PG DT+ M + +H++
Sbjct: 283 RRKLDREEIKPIRLLG--STIPLCSAQWERMFNTSRIPGEETDTI-----QHMRDSKHIV 335
Query: 306 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 365
V ++F + + + R L ++ Q+++I+ S + LT+ R WA R
Sbjct: 336 VYHRGRYFKVWLYHDGRLLKPREMEQQMQRILDNTSEPQPGEARLAALTAGDRVPWARCR 395
Query: 366 TVLVKDSTNRDSLDMIERCICLVCLD-APGGVELSDTHRALQ-----LLHGGGYSKNGAN 419
N+ SLD +E+ V LD G D ++ LLHG Y +
Sbjct: 396 QAYFGRGKNKQSLDAVEKAAFFVTLDETEEGYRSEDPDTSMDSYAKSLLHGRCY-----D 450
Query: 420 RWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVS 475
RW+DKS FVV ++G G+ EHS D ++ E+++ + + + D
Sbjct: 451 RWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGDINP 510
Query: 476 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFI 535
+P P RL+W E Q + +S + ++DF + F +GK IKK + SPDAF+
Sbjct: 511 NIPYPTRLQWDIPGECQEVIETSLNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPDAFV 570
Query: 536 QVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASE 595
Q+ALQLA Y+ + TYE++ R F+EGR + +RS T E+ FVRA+ D A +
Sbjct: 571 QLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMVD--PAQTVEQ 628
Query: 596 KLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVL 655
+L L K A +A+TG ID HL L +++ + E P F+ E ++S + L
Sbjct: 629 RLKLFKLASEKHQHMYRLAMTGSGIDRHLFCLYVVSKYLAVESP--FLKE--VLSEPWRL 684
Query: 656 STSQVP-TTTEMFCC------------YGPVVPNGYGACYNPQPETIL-FCISSFHSCKE 701
STSQ P E+F +GPV +GYG Y E ++ F ISS SC E
Sbjct: 685 STSQTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSCPE 744
Query: 702 T 702
T
Sbjct: 745 T 745
>gi|221316602 peroxisomal carnitine O-octanoyltransferase isoform 1
[Homo sapiens]
Length = 640
Score = 246 bits (629), Expect = 4e-65
Identities = 182/632 (28%), Positives = 299/632 (47%), Gaps = 52/632 (8%)
Query: 128 ESGLPKLPVPPLQQTLATYLQCM----------------------------RHLVSEEQF 159
+ LP LPVP L+++L YL+ + + ++E++
Sbjct: 17 QDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEY 76
Query: 160 RKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVN---SSP 216
+K++ IVQ+F + G+GE L QKLLER + NW+ E+WLN YL+ R+ +N + P
Sbjct: 77 KKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGP 134
Query: 217 AVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGL 276
A F P QL + + L+Y LL +P ++ PL M Q+ L
Sbjct: 135 AAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVH----KVGNTPLDMNQFRML 190
Query: 277 FSSYRLPGHTQDTLVA--QNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLR 334
FS+ ++PG T+D+++ + S P H++V C + FV DV+ ++ +L QL
Sbjct: 191 FSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLT 250
Query: 335 KIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVK-DSTNRDSLDMIERCICLVCL-DA 392
I K +E + P I LTS+ R+ WA+AR L+ D N L+ I+ + + + D+
Sbjct: 251 YIHKKCHSEPDG-PGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDS 309
Query: 393 PGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQ 452
V D + + G + RW DKS + +G G C+H+PFD +++V
Sbjct: 310 SPHVTPEDYSEIIAAILIG----DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVN 365
Query: 453 CTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFI 512
+ ++ + + Q+ + ++ V ++P P L + ++ + + + R +L
Sbjct: 366 ISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIA 425
Query: 513 VYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRS 572
Y F ++GK K + PD FIQ+ALQLA+YRLH YE+A R F GR + +RS
Sbjct: 426 AYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRS 485
Query: 573 ATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELAR 632
T EA+ + +++ D +V E+ + A G D HLL L +A+
Sbjct: 486 CTVEAVRWCQSMQD--PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAK 543
Query: 633 AMCKELPEMFMDETYLMS---NRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETI 689
+PE+F D + S FVLSTS V P+V NGYG Y+ + +
Sbjct: 544 EEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRF 602
Query: 690 LFCISSFHSCKETSSSKFAKAVEESLIDMRDL 721
+ S++ SC ET + K + + DM L
Sbjct: 603 VVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634
>gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 246 bits (628), Expect = 6e-65
Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+ +N+VS++W +YL R L VNS+ V+ TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 306 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 365
V +FF L + R L DL Q ++I+ S + LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
Query: 366 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 420
N+ +L+ IER V LD + +L L LHG Y NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
Query: 421 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 476
W+DKS + ++G G+ EH+ D ++ E +L H+ +
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
Query: 477 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 536
L P RL+W + Q + SS + + + +++ ++F +GK IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
Query: 537 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 596
+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+A+ + + A +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
Query: 597 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 656
L K A + Q Y +A+TG ID HL L +++ + P F+ E ++S + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
Query: 657 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 702
TSQ+P + MF +GPV +GYG Y E TI F ISS S ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
Query: 703 SSSKFAKAVEESLIDMRDL 721
++ +F + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764
>gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 246 bits (628), Expect = 6e-65
Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+ +N+VS++W +YL R L VNS+ V+ TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 306 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 365
V +FF L + R L DL Q ++I+ S + LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
Query: 366 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 420
N+ +L+ IER V LD + +L L LHG Y NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
Query: 421 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 476
W+DKS + ++G G+ EH+ D ++ E +L H+ +
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
Query: 477 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 536
L P RL+W + Q + SS + + + +++ ++F +GK IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
Query: 537 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 596
+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+A+ + + A +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
Query: 597 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 656
L K A + Q Y +A+TG ID HL L +++ + P F+ E ++S + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
Query: 657 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 702
TSQ+P + MF +GPV +GYG Y E TI F ISS S ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
Query: 703 SSSKFAKAVEESLIDMRDL 721
++ +F + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764
>gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 246 bits (628), Expect = 6e-65
Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+ +N+VS++W +YL R L VNS+ V+ TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 306 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 365
V +FF L + R L DL Q ++I+ S + LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
Query: 366 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 420
N+ +L+ IER V LD + +L L LHG Y NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
Query: 421 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 476
W+DKS + ++G G+ EH+ D ++ E +L H+ +
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
Query: 477 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 536
L P RL+W + Q + SS + + + +++ ++F +GK IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
Query: 537 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 596
+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+A+ + + A +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
Query: 597 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 656
L K A + Q Y +A+TG ID HL L +++ + P F+ E ++S + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
Query: 657 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 702
TSQ+P + MF +GPV +GYG Y E TI F ISS S ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
Query: 703 SSSKFAKAVEESLIDMRDL 721
++ +F + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764
>gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 246 bits (628), Expect = 6e-65
Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+ +N+VS++W +YL R L VNS+ V+ TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 306 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 365
V +FF L + R L DL Q ++I+ S + LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
Query: 366 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 420
N+ +L+ IER V LD + +L L LHG Y NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
Query: 421 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 476
W+DKS + ++G G+ EH+ D ++ E +L H+ +
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
Query: 477 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 536
L P RL+W + Q + SS + + + +++ ++F +GK IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
Query: 537 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 596
+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+A+ + + A +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
Query: 597 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 656
L K A + Q Y +A+TG ID HL L +++ + P F+ E ++S + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
Query: 657 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 702
TSQ+P + MF +GPV +GYG Y E TI F ISS S ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
Query: 703 SSSKFAKAVEESLIDMRDL 721
++ +F + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764
>gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 246 bits (628), Expect = 6e-65
Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+ +N+VS++W +YL R L VNS+ V+ TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 306 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 365
V +FF L + R L DL Q ++I+ S + LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
Query: 366 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 420
N+ +L+ IER V LD + +L L LHG Y NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
Query: 421 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 476
W+DKS + ++G G+ EH+ D ++ E +L H+ +
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
Query: 477 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 536
L P RL+W + Q + SS + + + +++ ++F +GK IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
Query: 537 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 596
+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+A+ + + A +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
Query: 597 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 656
L K A + Q Y +A+TG ID HL L +++ + P F+ E ++S + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
Query: 657 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 702
TSQ+P + MF +GPV +GYG Y E TI F ISS S ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
Query: 703 SSSKFAKAVEESLIDMRDL 721
++ +F + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764
>gi|4503023 carnitine O-palmitoyltransferase precursor [Homo
sapiens]
Length = 658
Score = 243 bits (619), Expect = 6e-64
Identities = 184/629 (29%), Positives = 305/629 (48%), Gaps = 61/629 (9%)
Query: 128 ESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKL--LE 185
+ LP+LP+P L+ T+ YL + L+++ QFRK++ + F G+G+ L ++L L+
Sbjct: 46 QDSLPRLPIPKLEDTIRRYLSAQKPLLNDGQFRKTEQFCKSF--ENGIGKELHEQLVALD 103
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+Q K +++S W DMYL+ R ++ +N +P + F +DQL A ++ + +
Sbjct: 104 KQNKHTSYISGPWF-DMYLSARDSVVLNFNPFMAFNPDPKSEYNDQLTRATNMTVSAIRF 162
Query: 246 -----KALLDSHSIPTDCAKGQ----------------------LSGQPLCMKQYYGLFS 278
LL+ + AK ++ PL M QY+ LF+
Sbjct: 163 LKTLRAGLLEPEVFHLNPAKSDTITFKRLIRFVPSSLSWYGAYLVNAYPLDMSQYFRLFN 222
Query: 279 SYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFFVLDVVINFRRL-SEGDLFTQLRKIV 337
S RLP ++D L + + H++V F++ DV+ + S ++ L+ I+
Sbjct: 223 STRLPKPSRDELFTDDKA-----RHLLVLRKGNFYIFDVLDQDGNIVSPSEIQAHLKYIL 277
Query: 338 KMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVE 397
+S E P+ LTS+ R WAE R L+ S N +SL ++ + +CLD +
Sbjct: 278 SDSSPAPEF--PLAYLTSENRDIWAELRQKLMS-SGNEESLRKVDSAVFCLCLDDFPIKD 334
Query: 398 LSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHL 457
L H + +LHG +G NRW+DKS ++ +DG+ V EHS DG+ +++ +
Sbjct: 335 L--VHLSHNMLHG-----DGTNRWFDKSFNLIIAKDGSTAVHFEHSWGDGVAVLRFFNEV 387
Query: 458 LKHMTQSSRKLIRAD--SVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYK 515
K TQ+ ++ + ++L ++ + ++ + ++ EK +K L +
Sbjct: 388 FKDSTQTPAVTPQSQPATTDSTVTVQKLNFELTDALKTGITAAKEKFDATMKTLTIDCVQ 447
Query: 516 FDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATP 575
F GK F+KKQK SPDA Q+A Q+AF R + + V TYES S F+ GR + IR A+
Sbjct: 448 FQRGGKEFLKKQKLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASV 507
Query: 576 E----ALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELA 631
+ AFVR + H A E ++ + + T A G D HL ALR LA
Sbjct: 508 YTKRCSEAFVREPSRHS----AGELQQMMVECSKYHGQLTKEAAMGQGFDRHLFALRHLA 563
Query: 632 RAMCKELPEMFMDETYLMSNRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILF 691
A LPE+++D Y N VLSTS + + + PVV +G+G Y I
Sbjct: 564 AAKGIILPELYLDPAYGQINHNVLSTSTLSSPAVNLGGFAPVVSDGFGVGYAVHDNWIGC 623
Query: 692 CISSFHSCKETSSSKFAKAVEESLIDMRD 720
+SS+ ++ +F + VE++L DM D
Sbjct: 624 NVSSYPG---RNAREFLQCVEKALEDMFD 649
>gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo
sapiens]
Length = 738
Score = 229 bits (583), Expect = 9e-60
Identities = 183/599 (30%), Positives = 293/599 (48%), Gaps = 45/599 (7%)
Query: 146 YLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLN 205
YL+ +R L+ +E++ + + + ++F LQ+ L+ + +N+VS++W +YL
Sbjct: 154 YLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLR 211
Query: 206 NRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSG 265
R L VNS+ V+ TD Q ++I ++ Y+ LD I A G +
Sbjct: 212 GRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIV-- 268
Query: 266 QPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFFVLDVVINFRRLS 325
P+C Q +F++ R+PG +DT V Q+ S + HV V +FF L + R L
Sbjct: 269 -PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVAVYHKGRFFKLWLYEGARLLK 322
Query: 326 EGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMIERCI 385
DL Q ++I+ S + LT+ GR EWA+AR N+ +L+ IER
Sbjct: 323 PQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAA 382
Query: 386 CLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVC 440
V LD + +L L LHG Y NRW+DKS + ++G G+
Sbjct: 383 FFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NRWFDKSFTLISFKNGQLGLNA 437
Query: 441 EHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLA 496
EH+ D ++ E +L H+ + L P RL+W + Q +
Sbjct: 438 EHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIE 497
Query: 497 SSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYES 556
SS + + + +++ ++F +GK IKK + SPDAF+Q+ALQLA +R + TYE+
Sbjct: 498 SSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEA 557
Query: 557 ASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAIT 616
+ R F+EGR + +RS T E+ AFV+A+ + + A + L K A + Q Y +A+T
Sbjct: 558 SMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLRDLFQKAAKKHQNMYR-LAMT 615
Query: 617 GMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQVP-TTTEMF-------- 667
G ID HL L +++ + P F+ E ++S + LSTSQ+P + MF
Sbjct: 616 GAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLSTSQIPQSQIRMFDPEQHPNH 671
Query: 668 ----CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKETSSSKFAKAVEESLIDMRDL 721
+GPV +GYG Y E TI F ISS S ET++ +F + ++L+D+ DL
Sbjct: 672 LGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADL 730
>gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo
sapiens]
Length = 792
Score = 224 bits (571), Expect = 2e-58
Identities = 182/615 (29%), Positives = 292/615 (47%), Gaps = 49/615 (7%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
S + LP+ PVP +Q T+ YL+ +R ++S+E F + + Q+F LQ L
Sbjct: 166 SYQRSLPRQPVPSVQDTVRKYLESVRPILSDEDFDWTAVLAQEFLRLQA--SLLQWYLRL 223
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+ +N+VS++W +YL +R L VNS+ ++ AR A + + +L Y
Sbjct: 224 KSWWASNYVSDWWEEFVYLRSRNPLMVNSNYYMMAAR------------AGNAVHALLLY 271
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
+ L+ IP G +PLC QY +F++ R+PG +D + + S +HV
Sbjct: 272 RHRLNRQEIPPTLLMGM---RPLCSAQYEKIFNTTRIPGVQKDYIRHLHDS-----QHVA 323
Query: 306 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 365
V +FF + LS L Q ++I+ S + LT+ R WA+ R
Sbjct: 324 VFHRGRFFRMGTHSRNSLLSPRALEQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVR 383
Query: 366 TVLVKDSTNRDSLDMIERCICLVCLDA-PGGVELSDTHRALQLLHGGGYSKNGANRWYDK 424
T L + ++L+ +E V LDA P G+ D +L + G +RW+DK
Sbjct: 384 TSLKTQAA--EALEAVEGAAFFVSLDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDK 441
Query: 425 SLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSELPAP 480
S +V +G G+ EHS D + E L + S+ + LP P
Sbjct: 442 SFTLIVFSNGKLGLSVEHSWADCPISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQP 501
Query: 481 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 540
+RL+W +I ++ + + + +N+D V F +GK+FI++ S D+FIQ+ALQ
Sbjct: 502 QRLQWDLPDQIHSSISLALRGAKILSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQ 561
Query: 541 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 600
LA +R + TYESA R F EGR + +RS T EA FVRA+ D + P + L L
Sbjct: 562 LAHFRDRGQFCLTYESAMTRLFLEGRTETVRSCTREACNFVRAMEDKEKTDP--QCLALF 619
Query: 601 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQV 660
+ A+ A A++G +D HL AL ++R + + P + T + S ++ LSTSQ+
Sbjct: 620 RVAVDKHQALLKAAMSGQGVDRHLFALYIVSRFLHLQSPFL----TQVHSEQWQLSTSQI 675
Query: 661 PT-TTEMFCC------------YGPVVPNGYGACYNPQPE-TILFCISSFHSCKETSSSK 706
P +F +GP +GYG Y + I F ISS S +T S +
Sbjct: 676 PVQQMHLFDVHNYPDYVSSGGGFGPADDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHR 735
Query: 707 FAKAVEESLIDMRDL 721
+ +E++L+D+ L
Sbjct: 736 LGQHIEDALLDVASL 750
>gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo
sapiens]
Length = 803
Score = 223 bits (569), Expect = 4e-58
Identities = 183/615 (29%), Positives = 293/615 (47%), Gaps = 38/615 (6%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
S + LP+ PVP +Q T+ YL+ +R ++S+E F + + Q+F LQ L
Sbjct: 166 SYQRSLPRQPVPSVQDTVRKYLESVRPILSDEDFDWTAVLAQEFLRLQA--SLLQWYLRL 223
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+ +N+VS++W +YL +R L VNS+ ++ P T Q A + + +L Y
Sbjct: 224 KSWWASNYVSDWWEEFVYLRSRNPLMVNSNYYMMDFLYVTP-TPLQAARAGNAVHALLLY 282
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
+ L+ IP G +PLC QY +F++ R+PG +D + + S +HV
Sbjct: 283 RHRLNRQEIPPTLLMGM---RPLCSAQYEKIFNTTRIPGVQKDYIRHLHDS-----QHVA 334
Query: 306 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 365
V +FF + LS L Q ++I+ S + LT+ R WA+ R
Sbjct: 335 VFHRGRFFRMGTHSRNSLLSPRALEQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVR 394
Query: 366 TVLVKDSTNRDSLDMIERCICLVCLDA-PGGVELSDTHRALQLLHGGGYSKNGANRWYDK 424
T L + ++L+ +E V LDA P G+ D +L + G +RW+DK
Sbjct: 395 TSLKTQAA--EALEAVEGAAFFVSLDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDK 452
Query: 425 SLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSELPAP 480
S +V +G G+ EHS D + E L + S+ + LP P
Sbjct: 453 SFTLIVFSNGKLGLSVEHSWADCPISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQP 512
Query: 481 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 540
+RL+W +I ++ + + + +N+D V F +GK+FI++ S D+FIQ+ALQ
Sbjct: 513 QRLQWDLPDQIHSSISLALRGAKILSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQ 572
Query: 541 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 600
LA +R + TYESA R F EGR + +RS T EA FVRA+ D + P + L L
Sbjct: 573 LAHFRDRGQFCLTYESAMTRLFLEGRTETVRSCTREACNFVRAMEDKEKTDP--QCLALF 630
Query: 601 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQV 660
+ A+ A A++G +D HL AL ++R + + P + T + S ++ LSTSQ+
Sbjct: 631 RVAVDKHQALLKAAMSGQGVDRHLFALYIVSRFLHLQSPFL----TQVHSEQWQLSTSQI 686
Query: 661 PT-TTEMFCC------------YGPVVPNGYGACYNPQPE-TILFCISSFHSCKETSSSK 706
P +F +GP +GYG Y + I F ISS S +T S +
Sbjct: 687 PVQQMHLFDVHNYPDYVSSGGGFGPADDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHR 746
Query: 707 FAKAVEESLIDMRDL 721
+ +E++L+D+ L
Sbjct: 747 LGQHIEDALLDVASL 761
>gi|223468674 carnitine palmitoyltransferase 1B isoform d [Homo
sapiens]
Length = 691
Score = 150 bits (379), Expect = 4e-36
Identities = 109/333 (32%), Positives = 171/333 (51%), Gaps = 29/333 (8%)
Query: 407 LLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMT 462
LLHG Y NRW+DKS + ++G G+ EH+ D ++ E +L H+
Sbjct: 362 LLHGNCY-----NRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLG 416
Query: 463 QSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKT 522
+ L P RL+W + Q + SS + + + +++ ++F +GK
Sbjct: 417 YTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKG 476
Query: 523 FIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVR 582
IKK + SPDAF+Q+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+
Sbjct: 477 LIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQ 536
Query: 583 AVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMF 642
A+ + + A + L K A + Q Y +A+TG ID HL L +++ + P F
Sbjct: 537 AMME-GSHTKADLRDLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--F 592
Query: 643 MDETYLMSNRFVLSTSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-T 688
+ E ++S + LSTSQ+P + MF +GPV +GYG Y E T
Sbjct: 593 LAE--VLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENT 650
Query: 689 ILFCISSFHSCKETSSSKFAKAVEESLIDMRDL 721
I F ISS S ET++ +F + ++L+D+ DL
Sbjct: 651 IFFHISSKFSSSETNAQRFGNHIRKALLDIADL 683
Score = 77.8 bits (190), Expect = 3e-14
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245
+ +N+VS++W +YL R L VNS+ + TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSN-YYVMDLVLIKNTDVQAARLGNIIHAMIMY 284
Query: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 306 VACCNQFFVLDVVINFRRLS 325
V +FF L + R LS
Sbjct: 337 VYHKGRFFKLWLYEGARLLS 356
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 43.1 bits (100), Expect = 0.001
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 51 PAGNPGCSPHPRAATRP----PPLPAHTPAHTPEWCGAASAEAAEPRRAGPHLCIPAP-G 105
P G+P +P P+ A+ P PP P +PA TP GA + AA +P+P G
Sbjct: 1019 PKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAA---------TLPSPKG 1069
Query: 106 LTKTPILEKVPRKMAAKTPSSEESGLPKLPVP 137
TP L+ P AA PS + G P P P
Sbjct: 1070 GPATPSLKGAPTPPAATPPSPK--GGPATPSP 1099
Score = 41.2 bits (95), Expect = 0.004
Identities = 34/97 (35%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 45 PGDVGGPAG-NPGCSPHPRAATRPPPLPAHTPAHTPEWCGAASAEAAEPR--RAGPHLCI 101
P GGPA +P +P P AAT PP P PA TP GA + AA P + GP
Sbjct: 948 PSPKGGPATPSPKWAPTPPAAT--PPSPKGGPA-TPSPKGAPTPPAATPPSPKGGPATPS 1004
Query: 102 PAPGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPP 138
P T + P+ A TP + + P PP
Sbjct: 1005 PKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPP 1041
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 45 PGDVGGPAG-NPGCSPHPRAATRPPPLPAHTPAHTPEWCGAASAEAA-EPRRAGPHLCIP 102
P GGPA +P +P P A T PP P +PA TP GA++ AA P G P
Sbjct: 994 PSPKGGPATPSPKGAPTPPAVT--PPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATP 1051
Query: 103 AP-GLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPP 138
P G TP K TPS + + P PP
Sbjct: 1052 LPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPP 1088
Score = 37.4 bits (85), Expect = 0.051
Identities = 39/126 (30%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 20 EEGGGTRGRREVRPACFLQSGG----RGDPGDVGGPAG-NPGCSPHPRAATRPPPLPAHT 74
+EG T ++ PA + S R P G PA +P +P P AAT PP P
Sbjct: 897 KEGPATPAPKQA-PALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAAT--PPSPKGG 953
Query: 75 PA-HTPEWCGAASAEAAEPRRAGPHLCIPAPGLTKTPILEKVPR-KMAAKTPSSEESGLP 132
PA +P+W A + GP P+P TP P K TPS + + P
Sbjct: 954 PATPSPKWAPTPPAATPPSPKGGP--ATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTP 1011
Query: 133 KLPVPP 138
PP
Sbjct: 1012 PAVTPP 1017
Score = 35.4 bits (80), Expect = 0.19
Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 13/94 (13%)
Query: 45 PGDVGGPAGNPGC-SPHPRAATRPPPLPAHTPAHTPEWCGAASAEAAEPRRAGPHLCIPA 103
P GGPA +P +P P AAT PP P +P TP GA + A P P+
Sbjct: 1295 PSPKGGPATSPPKGAPTPPAAT--PPSPKGSPG-TPPPKGAPTPPAVTP---------PS 1342
Query: 104 PGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVP 137
P T T K TPSS+E P P
Sbjct: 1343 PKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATP 1376
Score = 34.3 bits (77), Expect = 0.43
Identities = 32/112 (28%), Positives = 36/112 (32%), Gaps = 13/112 (11%)
Query: 40 GGRGDPGDVGGPAGNPGCSPHPRAATRPPP------LPAHTPAH------TPEWCGAASA 87
GG P G P P P+ PP PA TP TP GA +
Sbjct: 1092 GGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTT 1151
Query: 88 EAAEPRRAGPHLCIPAP-GLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPP 138
AA P L P P G TP K TPS + + PP
Sbjct: 1152 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1203
Score = 32.0 bits (71), Expect = 2.2
Identities = 34/93 (36%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
Query: 45 PGDVGGPAG-NPGCSPHPRAATRPPPLPAHTPAHTPEWCGAASAEAAEPRRAGPHLCIPA 103
P GGPA +P +P P AA PP P A TP GA + AA P L P
Sbjct: 1088 PSPKGGPATPSPKGAPMPPAA--TPPSPKGGLA-TPPHKGAPTTPAATPPSPKGGLATPP 1144
Query: 104 P-GLTKTPILEKVPRKMAAKTPSSEESGLPKLP 135
P G TP A TP S + GL P
Sbjct: 1145 PKGAPTTP----------AATPPSPKGGLATPP 1167
Score = 31.2 bits (69), Expect = 3.7
Identities = 31/104 (29%), Positives = 37/104 (35%), Gaps = 10/104 (9%)
Query: 40 GGRGDPGDVGGPAGNPGCSPHPRAA-TRPPPLPAHT-PAHTPEWCGAASAEAAEPRRAGP 97
GG P G P P P+ PPP A T PA TP A P + P
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPP--SLKGGLATPPHKGAP 1287
Query: 98 HLCIPAP----GLTKTPILEKVPRKMAAKTPSSEESGLPKLPVP 137
+ + P G T + P AA PS + G P P P
Sbjct: 1288 NPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPK--GSPGTPPP 1329
>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
Length = 264
Score = 41.6 bits (96), Expect = 0.003
Identities = 45/126 (35%), Positives = 53/126 (42%), Gaps = 18/126 (14%)
Query: 29 REVRPACFLQSGGRGDPGDVGGPAGNPGCSPHPRAATRPPPLPAHTPAHTPEWCGAASAE 88
R+ RPA G G G AG P P+AA R A E AASAE
Sbjct: 118 RQPRPAARAPEGALASCGLRAGWAGWP-----PQAAWRAWGASVDAAAPPSE---AASAE 169
Query: 89 AAEPRRAGPHL-----CIP--APGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPPLQ- 140
A P R+GP C+P APGL + + E+ P PSSE P+ P LQ
Sbjct: 170 ARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARS-PEPPANRLQD 228
Query: 141 -QTLAT 145
TL T
Sbjct: 229 FDTLVT 234
>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 41.6 bits (96), Expect = 0.003
Identities = 45/126 (35%), Positives = 53/126 (42%), Gaps = 18/126 (14%)
Query: 29 REVRPACFLQSGGRGDPGDVGGPAGNPGCSPHPRAATRPPPLPAHTPAHTPEWCGAASAE 88
R+ RPA G G G AG P P+AA R A E AASAE
Sbjct: 112 RQPRPAARAPEGALASCGLRAGWAGWP-----PQAAWRAWGASVDAAAPPSE---AASAE 163
Query: 89 AAEPRRAGPHL-----CIP--APGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPPLQ- 140
A P R+GP C+P APGL + + E+ P PSSE P+ P LQ
Sbjct: 164 ARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARS-PEPPANRLQD 222
Query: 141 -QTLAT 145
TL T
Sbjct: 223 FDTLVT 228
>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
PRKX (Protein kinase PKX1) [Homo sapiens]
Length = 330
Score = 41.6 bits (96), Expect = 0.003
Identities = 45/126 (35%), Positives = 53/126 (42%), Gaps = 18/126 (14%)
Query: 29 REVRPACFLQSGGRGDPGDVGGPAGNPGCSPHPRAATRPPPLPAHTPAHTPEWCGAASAE 88
R+ RPA G G G AG P P+AA R A E AASAE
Sbjct: 125 RQPRPAARAPEGALASCGLRAGWAGWP-----PQAAWRAWGASVDAAAPPSE---AASAE 176
Query: 89 AAEPRRAGPHL-----CIP--APGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPPLQ- 140
A P R+GP C+P APGL + + E+ P PSSE P+ P LQ
Sbjct: 177 ARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARS-PEPPANRLQD 235
Query: 141 -QTLAT 145
TL T
Sbjct: 236 FDTLVT 241
>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 40.8 bits (94), Expect = 0.005
Identities = 45/126 (35%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 29 REVRPACFLQSGGRGDPGDVGGPAGNPGCSPHPRAATRPPPLPAHTPAHTPEWCGAASAE 88
R+ RPA G G G AG P P+AA R A E AASAE
Sbjct: 112 RQPRPAARAPEGALASCGLRAGWAGWP-----PQAAWRAWGASVDAAAPPSE---AASAE 163
Query: 89 AAEPRRAGPHL-----CIP--APGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPPLQ- 140
A P R+GP C+P APGL + + E+ P A + S ES P+ P LQ
Sbjct: 164 ARLPERSGPARRPGPECVPMKAPGLAQAAVAEETP-DWAPELCPSPESRSPEPPANRLQD 222
Query: 141 -QTLAT 145
TL T
Sbjct: 223 FDTLVT 228
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 40.8 bits (94), Expect = 0.005
Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 14/103 (13%)
Query: 49 GGPAGNPGCSPHPRAATRPPPLP--AHTPAHTPEWCGAASAEAAEP---------RRAGP 97
G PA +P P A PPP P A PA P AA+ P +RA P
Sbjct: 117 GAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAP 176
Query: 98 HLCIPAPGLTKTPILEKV--PRKMAAKTPSSEESGLPKLPVPP 138
L P P P + PR+ ++ E LP P PP
Sbjct: 177 -LAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPP 218
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 40.4 bits (93), Expect = 0.006
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 61 PRAATRPPPLPAHTPAHTPEWCGAASAEAAEPRRAGPHLCIPAPGLTKTPILEKVPRKMA 120
PR PPP P P P+ GAA+A AA A L I + P+
Sbjct: 121 PRGEAPPPPPPTARPGERPDGAGAAAAAAAAAAAAWDTLKI-----------SQAPQVSI 169
Query: 121 AKTPSSEESGLPKLPVPP 138
+++ S E+G P +P PP
Sbjct: 170 SRSKSYRENGAPFVPPPP 187
Score = 30.4 bits (67), Expect = 6.3
Identities = 26/67 (38%), Positives = 28/67 (41%), Gaps = 14/67 (20%)
Query: 51 PAGNPGCSPHPRAATRP-------PPLPAHTPAHTPEWCGAASAEAAEPRRAGPHLCIPA 103
P G P P P +AT P P P H PA W AA+A AA A P L P
Sbjct: 395 PPGLP--FPGPLSATHPLSPYLDASPFPPHHPALDSAWTAAAAAAAA----AFPSL-PPP 447
Query: 104 PGLTKTP 110
PG P
Sbjct: 448 PGSASLP 454
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 40.4 bits (93), Expect = 0.006
Identities = 39/132 (29%), Positives = 50/132 (37%), Gaps = 6/132 (4%)
Query: 42 RGDPGDVGGPAGNPGCSPHPRA-ATRPPPLPAHTPAHTPEWCGAASAEAAEPRRAGPHLC 100
R PG V G A P S P + RPPP PA P GAA R G
Sbjct: 285 RKTPGPVRGLAPPPPTSASPSLLSNRPPP-----PARDPPSRGAAPPPPPPVIRNGARDA 339
Query: 101 IPAPGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFR 160
P P + E R PS +G P P PPL+ + +R + + + +
Sbjct: 340 PPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDSITTVRSFLDDFESK 399
Query: 161 KSQAIVQQFGAP 172
S V+ F AP
Sbjct: 400 YSFHPVEDFPAP 411
Score = 30.0 bits (66), Expect = 8.2
Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 15/91 (16%)
Query: 55 PGCSPHPRAATRPPPLPAHT---PAHTPEW-CGAASAEAAEPRRAGPHLCIPAPGLTKTP 110
P P RA P PLP H+ PA+ E + P R GP PAP K P
Sbjct: 178 PPPPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGP----PAPPPVKPP 233
Query: 111 ILEKVPRKMAAKTPSSEESGLPKLPVPPLQQ 141
P + +T S +S P P PP +Q
Sbjct: 234 -----PSPVNIRTGPSGQSLAP--PPPPYRQ 257
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,253,609
Number of Sequences: 37866
Number of extensions: 1678772
Number of successful extensions: 9473
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 384
Number of HSP's that attempted gapping in prelim test: 8312
Number of HSP's gapped (non-prelim): 1352
length of query: 748
length of database: 18,247,518
effective HSP length: 110
effective length of query: 638
effective length of database: 14,082,258
effective search space: 8984480604
effective search space used: 8984480604
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.