Guide to the Human Genome
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Name: CROT Sequence: fasta or formatted (640aa) NCBI GI: 221316602
Description:

peroxisomal carnitine O-octanoyltransferase isoform 1

Referenced in:

Fatty Acid Oxidation and Ketone Bodies
Peroxisomes

Other entries for this name:
alt prot [612aa] peroxisomal carnitine O-octanoyltransferase isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         36           2
 C cysteine            2.3         15           2
 D aspartate           4.7         30           2
 E glutamate           7.5         48           2
 F phenylalanine       4.7         30           2
 G glycine             6.1         39           4
 H histidine           3.4         22           1
 I isoleucine          4.8         31           2
 K lysine              6.2         40           2
 L leucine            10.3         66           3
 M methionine          2.7         17           2
 N asparagine          4.1         26           1
 P proline             5.0         32           2
 Q glutamine           4.5         29           2
 R arginine            5.5         35           1
 S serine              6.1         39           2
 T threonine           4.8         31           1
 V valine              6.1         39           3
 W tryptophan          1.7         11           2
 Y tyrosine            3.8         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peroxisomal carnitine O-octanoyltransferase isoform... 
CROT                  0.944   peroxisomal carnitine O-octanoyltransferase isoform ...
CRAT                  0.196   carnitine acetyltransferase precursor 
CHAT                  0.171   choline acetyltransferase isoform 1 
CHAT                  0.171   choline acetyltransferase isoform 1 
CHAT                  0.171   choline acetyltransferase isoform 3 
CHAT                  0.171   choline acetyltransferase isoform 1 
CHAT                  0.171   choline acetyltransferase isoform 1 
CHAT                  0.171   choline acetyltransferase isoform 1 
CHAT                  0.171   choline acetyltransferase isoform 2 
CPT1A                 0.157   carnitine palmitoyltransferase 1A liver isoform 1 [H...
CPT1A                 0.154   carnitine palmitoyltransferase 1A liver isoform 2 [H...
CPT2                  0.152   carnitine O-palmitoyltransferase precursor 
CPT1B                 0.144   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.144   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.144   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.144   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.144   carnitine palmitoyltransferase 1B isoform a 
CPT1C                 0.134   carnitine palmitoyltransferase 1C isoform 1 
CPT1C                 0.133   carnitine palmitoyltransferase 1C isoform 2 
CPT1B                 0.133   carnitine palmitoyltransferase 1B isoform c 
CPT1B                 0.079   carnitine palmitoyltransferase 1B isoform d 
ZFYVE26               0.006   zinc finger, FYVE domain containing 26 
PMFBP1                0.005   polyamine modulated factor 1 binding protein 1 isof...
PRPF8                 0.005   U5 snRNP-specific protein 
HADHA                 0.005   mitochondrial trifunctional protein, alpha subunit p...
ENPEP                 0.005   glutamyl aminopeptidase 
MRC1                  0.004   mannose receptor C type 1 precursor 
MRC1L1                0.004   mannose receptor, C type 1-like 1 
NUF2                  0.004   NUF2, NDC80 kinetochore complex component 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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