Guide to the Human Genome
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Name: CPT2 Sequence: fasta or formatted (658aa) NCBI GI: 4503023
Description:

carnitine O-palmitoyltransferase precursor

Referenced in:

Fatty Acid Oxidation and Ketone Bodies

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         52           3
 C cysteine            1.4          9           1
 D aspartate           5.8         38           2
 E glutamate           4.9         32           2
 F phenylalanine       5.9         39           2
 G glycine             5.9         39           2
 H histidine           2.7         18           1
 I isoleucine          3.6         24           2
 K lysine              5.8         38           2
 L leucine            10.5         69           3
 M methionine          2.1         14           2
 N asparagine          4.0         26           1
 P proline             5.8         38           1
 Q glutamine           4.6         30           2
 R arginine            5.5         36           2
 S serine              8.2         54           2
 T threonine           5.6         37           2
 V valine              5.6         37           2
 W tryptophan          1.1          7           1
 Y tyrosine            3.2         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carnitine O-palmitoyltransferase precursor 
CRAT                  0.184   carnitine acetyltransferase precursor 
CHAT                  0.167   choline acetyltransferase isoform 1 
CHAT                  0.167   choline acetyltransferase isoform 1 
CHAT                  0.167   choline acetyltransferase isoform 3 
CHAT                  0.167   choline acetyltransferase isoform 1 
CHAT                  0.167   choline acetyltransferase isoform 1 
CHAT                  0.167   choline acetyltransferase isoform 1 
CHAT                  0.167   choline acetyltransferase isoform 2 
CROT                  0.162   peroxisomal carnitine O-octanoyltransferase isoform ...
CPT1B                 0.155   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.155   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.155   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.155   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.155   carnitine palmitoyltransferase 1B isoform a 
CROT                  0.151   peroxisomal carnitine O-octanoyltransferase isoform...
CPT1A                 0.139   carnitine palmitoyltransferase 1A liver isoform 1 [H...
CPT1A                 0.138   carnitine palmitoyltransferase 1A liver isoform 2 [H...
CPT1B                 0.137   carnitine palmitoyltransferase 1B isoform c 
CPT1C                 0.133   carnitine palmitoyltransferase 1C isoform 2 
CPT1C                 0.131   carnitine palmitoyltransferase 1C isoform 1 
CPT1B                 0.086   carnitine palmitoyltransferase 1B isoform d 
ZNF716                0.006   PREDICTED: zinc finger protein 716 
KIAA0368              0.006   KIAA0368 protein 
FAT2                  0.005   FAT tumor suppressor 2 precursor 
EMILIN2               0.005   elastin microfibril interfacer 2 
REXO1                 0.005   transcription elongation factor B polypeptide 3 bin...
LOC100289777          0.004   PREDICTED: hypothetical protein XP_002348316 
LOC400986             0.004   PREDICTED: protein immuno-reactive with anti-PTH po...
SEMA3E                0.004   semaphorin 3E 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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