Guide to the Human Genome
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Name: CPT1B Sequence: fasta or formatted (772aa) NCBI GI: 23238256
Description:

carnitine palmitoyltransferase 1B isoform a

Referenced in:

Fatty Acid Oxidation and Ketone Bodies

Other entries for this name:
alt prot [738aa] carnitine palmitoyltransferase 1B isoform c
alt mRNA [772aa] carnitine palmitoyltransferase 1B isoform a
alt prot [691aa] carnitine palmitoyltransferase 1B isoform d
alt mRNA [772aa] carnitine palmitoyltransferase 1B isoform a
alt mRNA [772aa] carnitine palmitoyltransferase 1B isoform a
alt mRNA [772aa] carnitine palmitoyltransferase 1B isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         62           2
 C cysteine            1.9         15           1
 D aspartate           4.5         35           2
 E glutamate           5.1         39           2
 F phenylalanine       5.4         42           3
 G glycine             6.3         49           3
 H histidine           2.8         22           1
 I isoleucine          4.8         37           2
 K lysine              5.1         39           2
 L leucine            10.6         82           3
 M methionine          3.2         25           2
 N asparagine          2.7         21           1
 P proline             4.8         37           2
 Q glutamine           4.8         37           1
 R arginine            6.1         47           2
 S serine              7.5         58           3
 T threonine           4.7         36           2
 V valine              5.3         41           2
 W tryptophan          2.1         16           2
 Y tyrosine            4.1         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 1.000   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 1.000   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 1.000   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 1.000   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.946   carnitine palmitoyltransferase 1B isoform c 
CPT1A                 0.648   carnitine palmitoyltransferase 1A liver isoform 1 [H...
CPT1A                 0.634   carnitine palmitoyltransferase 1A liver isoform 2 [H...
CPT1C                 0.516   carnitine palmitoyltransferase 1C isoform 2 
CPT1C                 0.506   carnitine palmitoyltransferase 1C isoform 1 
CPT1B                 0.453   carnitine palmitoyltransferase 1B isoform d 
CRAT                  0.164   carnitine acetyltransferase precursor 
CHAT                  0.142   choline acetyltransferase isoform 1 
CHAT                  0.142   choline acetyltransferase isoform 1 
CHAT                  0.142   choline acetyltransferase isoform 3 
CHAT                  0.142   choline acetyltransferase isoform 1 
CHAT                  0.142   choline acetyltransferase isoform 1 
CHAT                  0.142   choline acetyltransferase isoform 1 
CHAT                  0.142   choline acetyltransferase isoform 2 
CPT2                  0.130   carnitine O-palmitoyltransferase precursor 
CROT                  0.129   peroxisomal carnitine O-octanoyltransferase isoform ...
CROT                  0.120   peroxisomal carnitine O-octanoyltransferase isoform...
SLC26A1               0.004   solute carrier family 26, member 1 isoform a 
SLC26A1               0.004   solute carrier family 26, member 1 isoform a 
MUPCDH                0.004   mucin and cadherin-like isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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