Search of human proteins with 188536112

Search of human proteins with 188536112

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|188536112 PAN2 polyA specific ribonuclease subunit homolog
isoform 1 [Homo sapiens]
         (1198 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|188536112 PAN2 polyA specific ribonuclease subunit homolog is...  2436   0.0  
gi|188536114 PAN2 polyA specific ribonuclease subunit homolog is...  2430   0.0  
gi|222136615 exonuclease NEF-sp isoform 2 [Homo sapiens]               68   6e-11
gi|222136613 exonuclease NEF-sp isoform 1 [Homo sapiens]               68   6e-11
gi|76781492 XPMC2 prevents mitotic catastrophe 2 homolog [Homo s...    65   5e-10
gi|194239666 interferon stimulated exonuclease gene 20kDa-like 1...    57   1e-07
gi|13569960 interferon stimulated exonuclease gene 20kDa-like 2 ...    52   3e-06
gi|239743602 PREDICTED: hypothetical protein XP_002342903 [Homo ...    48   5e-05
gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo ...    48   5e-05
gi|239743598 PREDICTED: hypothetical protein XP_002342901 [Homo ...    48   5e-05
gi|239743596 PREDICTED: hypothetical protein XP_002342900 [Homo ...    48   5e-05
gi|239743594 PREDICTED: hypothetical protein XP_002342913, parti...    48   5e-05
gi|126273519 exonuclease GOR [Homo sapiens]                            48   6e-05
gi|145199237 transcription elongation factor B polypeptide 3 bin...    44   7e-04
gi|6857800 interferon stimulated exonuclease [Homo sapiens]            44   0.001
gi|76257392 ubiquitin specific protease 48 isoform b [Homo sapiens]    36   0.25 
gi|52630449 ubiquitin specific protease 48 isoform a [Homo sapiens]    36   0.25 
gi|45267835 ubiquitin specific protease 50 [Homo sapiens]              35   0.33 
gi|32698815 ubiquitin thiolesterase 12 [Homo sapiens]                  34   0.73 
gi|110347427 ubiquitin specific protease 34 [Homo sapiens]             32   2.8  
gi|148539600 ubiquitin specific protease 53 [Homo sapiens]             32   2.8  
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ...    32   4.7  
gi|11967991 SRY-box 17 [Homo sapiens]                                  31   6.2  
gi|197116355 ubiquitin specific peptidase 46 isoform 2 [Homo sap...    31   6.2  
gi|31377709 ubiquitin specific peptidase 46 isoform 1 [Homo sapi...    31   6.2  
gi|55770886 ubiquitin thiolesterase 3 [Homo sapiens]                   31   6.2  
gi|222446620 hypothetical protein LOC342346 [Homo sapiens]             31   8.1  
gi|166235163 nuclear fragile X mental retardation protein intera...    31   8.1  

>gi|188536112 PAN2 polyA specific ribonuclease subunit homolog isoform
            1 [Homo sapiens]
          Length = 1198

 Score = 2436 bits (6314), Expect = 0.0
 Identities = 1198/1198 (100%), Positives = 1198/1198 (100%)

Query: 1    MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG 60
            MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
Sbjct: 1    MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG 60

Query: 61   VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR 120
            VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR
Sbjct: 61   VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR 120

Query: 121  QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSSTLLVGGLQNHILE 180
            QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSSTLLVGGLQNHILE
Sbjct: 121  QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSSTLLVGGLQNHILE 180

Query: 181  IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS 240
            IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS
Sbjct: 181  IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS 240

Query: 241  DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL 300
            DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
Sbjct: 241  DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL 300

Query: 301  AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS 360
            AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
Sbjct: 301  AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS 360

Query: 361  PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP 420
            PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP
Sbjct: 361  PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP 420

Query: 421  RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPVGREE 480
            RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPVGREE
Sbjct: 421  RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPVGREE 480

Query: 481  EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP 540
            EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
Sbjct: 481  EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP 540

Query: 541  VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGNNFLRAFRTIPEASALGLILADS 600
            VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGNNFLRAFRTIPEASALGLILADS
Sbjct: 541  VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGNNFLRAFRTIPEASALGLILADS 600

Query: 601  DEASGKGNLARLIQRWNRFILTQLHQDMQELEIPQAYRGAGGSSFCSSGDSVIGQLFSCE 660
            DEASGKGNLARLIQRWNRFILTQLHQDMQELEIPQAYRGAGGSSFCSSGDSVIGQLFSCE
Sbjct: 601  DEASGKGNLARLIQRWNRFILTQLHQDMQELEIPQAYRGAGGSSFCSSGDSVIGQLFSCE 660

Query: 661  MENCSLCRCGSETVRASSTLLFTLSYPDDKTGKNYDFAQVLKRSICLDQNTQAWCDTCEK 720
            MENCSLCRCGSETVRASSTLLFTLSYPDDKTGKNYDFAQVLKRSICLDQNTQAWCDTCEK
Sbjct: 661  MENCSLCRCGSETVRASSTLLFTLSYPDDKTGKNYDFAQVLKRSICLDQNTQAWCDTCEK 720

Query: 721  YQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKEFALA 780
            YQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKEFALA
Sbjct: 721  YQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKEFALA 780

Query: 781  DWKELGSPEGVLVCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPARAEEE 840
            DWKELGSPEGVLVCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPARAEEE
Sbjct: 781  DWKELGSPEGVLVCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPARAEEE 840

Query: 841  HGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKH 900
            HGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKH
Sbjct: 841  HGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKH 900

Query: 901  EAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTFIPLM 960
            EAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTFIPLM
Sbjct: 901  EAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTFIPLM 960

Query: 961  LNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPF 1020
            LNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPF
Sbjct: 961  LNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPF 1020

Query: 1021 IDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGL 1080
            IDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGL
Sbjct: 1021 IDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGL 1080

Query: 1081 QKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1140
            QKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL
Sbjct: 1081 QKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1140

Query: 1141 QLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVLAL 1198
            QLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVLAL
Sbjct: 1141 QLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVLAL 1198


>gi|188536114 PAN2 polyA specific ribonuclease subunit homolog isoform
            2 [Homo sapiens]
          Length = 1202

 Score = 2430 bits (6299), Expect = 0.0
 Identities = 1198/1202 (99%), Positives = 1198/1202 (99%), Gaps = 4/1202 (0%)

Query: 1    MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG 60
            MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
Sbjct: 1    MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG 60

Query: 61   VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR 120
            VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR
Sbjct: 61   VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR 120

Query: 121  QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSSTLLVGGLQNHILE 180
            QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSSTLLVGGLQNHILE
Sbjct: 121  QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSSTLLVGGLQNHILE 180

Query: 181  IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS 240
            IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS
Sbjct: 181  IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS 240

Query: 241  DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL 300
            DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
Sbjct: 241  DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL 300

Query: 301  AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS 360
            AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
Sbjct: 301  AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS 360

Query: 361  PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP 420
            PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP
Sbjct: 361  PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP 420

Query: 421  RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPVGREE 480
            RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPVGREE
Sbjct: 421  RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPVGREE 480

Query: 481  EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP 540
            EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
Sbjct: 481  EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP 540

Query: 541  VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGNNFLRAFRTIPEASALGLILADS 600
            VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGNNFLRAFRTIPEASALGLILADS
Sbjct: 541  VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGNNFLRAFRTIPEASALGLILADS 600

Query: 601  DEASGKGNLARLIQRWNRFILTQLHQDMQELEIPQAYRGAGGSSFCSSGDSVIGQLFSCE 660
            DEASGKGNLARLIQRWNRFILTQLHQDMQELEIPQAYRGAGGSSFCSSGDSVIGQLFSCE
Sbjct: 601  DEASGKGNLARLIQRWNRFILTQLHQDMQELEIPQAYRGAGGSSFCSSGDSVIGQLFSCE 660

Query: 661  MENCSLCRCGSETVRASSTLLFTLSYPD----DKTGKNYDFAQVLKRSICLDQNTQAWCD 716
            MENCSLCRCGSETVRASSTLLFTLSYPD    DKTGKNYDFAQVLKRSICLDQNTQAWCD
Sbjct: 661  MENCSLCRCGSETVRASSTLLFTLSYPDGSKSDKTGKNYDFAQVLKRSICLDQNTQAWCD 720

Query: 717  TCEKYQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKE 776
            TCEKYQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKE
Sbjct: 721  TCEKYQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKE 780

Query: 777  FALADWKELGSPEGVLVCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPAR 836
            FALADWKELGSPEGVLVCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPAR
Sbjct: 781  FALADWKELGSPEGVLVCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPAR 840

Query: 837  AEEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEP 896
            AEEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEP
Sbjct: 841  AEEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEP 900

Query: 897  IDKHEAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTF 956
            IDKHEAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTF
Sbjct: 901  IDKHEAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTF 960

Query: 957  IPLMLNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNE 1016
            IPLMLNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNE
Sbjct: 961  IPLMLNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNE 1020

Query: 1017 GIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFV 1076
            GIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFV
Sbjct: 1021 GIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFV 1080

Query: 1077 GHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDA 1136
            GHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDA
Sbjct: 1081 GHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDA 1140

Query: 1137 RTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVL 1196
            RTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVL
Sbjct: 1141 RTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVL 1200

Query: 1197 AL 1198
            AL
Sbjct: 1201 AL 1202


>gi|222136615 exonuclease NEF-sp isoform 2 [Homo sapiens]
          Length = 743

 Score = 67.8 bits (164), Expect = 6e-11
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 10/135 (7%)

Query: 1017 GIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFV 1076
            G   +D+ +  + +++DYLT +SGI       KI +   T LK    +L+ L+      V
Sbjct: 254  GCCVMDELVKPENKILDYLTSFSGI-----TKKILNPVTTKLKDVQRQLKALLPPDAVLV 308

Query: 1077 GHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGET---HDSI 1133
            GH L  D R + ++ P   V+DT  L+   + R   L+FLA   L   IQ      HD+ 
Sbjct: 309  GHSLDLDLRALKMIHP--YVIDTSLLYVREQGRRFKLKFLAKVILGKDIQCPDRLGHDAT 366

Query: 1134 EDARTALQLYRKYLE 1148
            EDART L+L R +L+
Sbjct: 367  EDARTILELARYFLK 381


>gi|222136613 exonuclease NEF-sp isoform 1 [Homo sapiens]
          Length = 774

 Score = 67.8 bits (164), Expect = 6e-11
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 10/135 (7%)

Query: 1017 GIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFV 1076
            G   +D+ +  + +++DYLT +SGI       KI +   T LK    +L+ L+      V
Sbjct: 254  GCCVMDELVKPENKILDYLTSFSGI-----TKKILNPVTTKLKDVQRQLKALLPPDAVLV 308

Query: 1077 GHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGET---HDSI 1133
            GH L  D R + ++ P   V+DT  L+   + R   L+FLA   L   IQ      HD+ 
Sbjct: 309  GHSLDLDLRALKMIHP--YVIDTSLLYVREQGRRFKLKFLAKVILGKDIQCPDRLGHDAT 366

Query: 1134 EDARTALQLYRKYLE 1148
            EDART L+L R +L+
Sbjct: 367  EDARTILELARYFLK 381


>gi|76781492 XPMC2 prevents mitotic catastrophe 2 homolog [Homo
            sapiens]
          Length = 422

 Score = 64.7 bits (156), Expect = 5e-10
 Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 35/218 (16%)

Query: 934  IEASVLLAEASLARKQRKTHTTFIPLMLNEMPQIGDL---VGLDAEFVTLNEEEAELRSD 990
            IEA++    A +ARKQ       + L L +    G L   + LD E V +          
Sbjct: 204  IEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGP-------- 255

Query: 991  GTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKI 1050
                  K  +   AR++ V   G        D Y+   E V DY T  SGI+P +L    
Sbjct: 256  ------KGEESMAARVSIVNQYGKC----VYDKYVKPTEPVTDYRTAVSGIRPENLKQGE 305

Query: 1051 SSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRM 1110
              + +    +  LK R L       VGH L  D +V+ L  PK ++ DT    + P K  
Sbjct: 306  ELEVVQKEVAEMLKGRIL-------VGHALHNDLKVLFLDHPKKKIRDTQK--YKPFKSQ 356

Query: 1111 I-----SLRFLAWYFLDLKIQGETHDSIEDARTALQLY 1143
            +     SLR L+   L L++Q   H SI+DA+ A++LY
Sbjct: 357  VKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLY 394


>gi|194239666 interferon stimulated exonuclease gene 20kDa-like 1
            [Homo sapiens]
          Length = 325

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 19/133 (14%)

Query: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDI--GVKFVGHG 1079
            D YI  +  + DY T++SGI         + +H+       +  + ++ +  G   VGH 
Sbjct: 144  DKYIRPEMPIADYRTRWSGI---------TRQHMRKAVPFQVAQKEILKLLKGKVVVGHA 194

Query: 1080 LQKDFRVINLMVPKDQVLDTVYLFH------MPRKRMISLRFLAWYFLDLKIQ--GETHD 1131
            L  DF+ +  + P+ Q  DT Y+ +      +  +  +SL+ LA   L  KIQ     H 
Sbjct: 195  LHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHS 254

Query: 1132 SIEDARTALQLYR 1144
            S+EDA TA++LYR
Sbjct: 255  SVEDATTAMELYR 267


>gi|13569960 interferon stimulated exonuclease gene 20kDa-like 2 [Homo
            sapiens]
          Length = 353

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 23/169 (13%)

Query: 984  EAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKP 1043
            + E+   G K  +     S+AR + V   G        D+YI     +VDY T++SGI+ 
Sbjct: 183  DCEMVGTGPKGHVS----SLARCSIVNYNGD----VLYDEYILPPCHIVDYRTRWSGIRK 234

Query: 1044 GDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLF 1103
              +   +++      +   LK+      G   VGH +  DF+ +    PK    DT ++ 
Sbjct: 235  QHM---VNATPFKIARGQILKIL----TGKIVVGHAIHNDFKALQYFHPKSLTRDTSHIP 287

Query: 1104 HMPRK------RMISLRFLAWYFL--DLKIQGETHDSIEDARTALQLYR 1144
             + RK        +SL+ L    L  D+++    H S+EDA+  ++LY+
Sbjct: 288  PLNRKADCPENATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQATMELYK 336


>gi|239743602 PREDICTED: hypothetical protein XP_002342903 [Homo
            sapiens]
          Length = 675

 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
            D ++    ++VDY T++SG+   D+     +K   TL      L          +GH L+
Sbjct: 532  DTFVKPDNEIVDYNTRFSGVTEADV-----AKTSITLPQVQAILLSFFSAQTILIGHSLE 586

Query: 1082 KDFRVINLMVPKDQVLDTVYLF----HMPRKRMISLRFLAWYFLDLKIQG--ETHDSIED 1135
             D   + L+     V+DT  LF      P KR  SLR LA  +L   IQ   + H+S ED
Sbjct: 587  SDLLALKLI--HSTVVDTAVLFPHYLGFPYKR--SLRNLAADYLAQIIQDSQDGHNSSED 642

Query: 1136 ARTALQL 1142
            A   LQL
Sbjct: 643  ANACLQL 649


>gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo
            sapiens]
          Length = 675

 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
            D ++    ++VDY T++SG+   D+     +K   TL      L          +GH L+
Sbjct: 532  DTFVKPDNEIVDYNTRFSGVTEADV-----AKTSITLPQVQAILLSFFSAQTILIGHSLE 586

Query: 1082 KDFRVINLMVPKDQVLDTVYLF----HMPRKRMISLRFLAWYFLDLKIQG--ETHDSIED 1135
             D   + L+     V+DT  LF      P KR  SLR LA  +L   IQ   + H+S ED
Sbjct: 587  SDLLALKLI--HSTVVDTAVLFPHYLGFPYKR--SLRNLAADYLAQIIQDSQDGHNSSED 642

Query: 1136 ARTALQL 1142
            A   LQL
Sbjct: 643  ANACLQL 649


>gi|239743598 PREDICTED: hypothetical protein XP_002342901 [Homo
            sapiens]
          Length = 675

 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
            D ++    ++VDY T++SG+   D+     +K   TL      L          +GH L+
Sbjct: 532  DTFVKPDNEIVDYNTRFSGVTEADV-----AKTSITLPQVQAILLSFFSAQTILIGHSLE 586

Query: 1082 KDFRVINLMVPKDQVLDTVYLF----HMPRKRMISLRFLAWYFLDLKIQG--ETHDSIED 1135
             D   + L+     V+DT  LF      P KR  SLR LA  +L   IQ   + H+S ED
Sbjct: 587  SDLLALKLI--HSTVVDTAVLFPHYLGFPYKR--SLRNLAADYLAQIIQDSQDGHNSSED 642

Query: 1136 ARTALQL 1142
            A   LQL
Sbjct: 643  ANACLQL 649


>gi|239743596 PREDICTED: hypothetical protein XP_002342900 [Homo
            sapiens]
          Length = 675

 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
            D ++    ++VDY T++SG+   D+     +K   TL      L          +GH L+
Sbjct: 532  DTFVKPDNEIVDYNTRFSGVTEADV-----AKTSITLPQVQAILLSFFSAQTILIGHSLE 586

Query: 1082 KDFRVINLMVPKDQVLDTVYLF----HMPRKRMISLRFLAWYFLDLKIQG--ETHDSIED 1135
             D   + L+     V+DT  LF      P KR  SLR LA  +L   IQ   + H+S ED
Sbjct: 587  SDLLALKLI--HSTVVDTAVLFPHYLGFPYKR--SLRNLAADYLAQIIQDSQDGHNSSED 642

Query: 1136 ARTALQL 1142
            A   LQL
Sbjct: 643  ANACLQL 649


>gi|239743594 PREDICTED: hypothetical protein XP_002342913, partial
            [Homo sapiens]
          Length = 552

 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
            D ++    ++VDY T++SG+   D+     +K   TL      L          +GH L+
Sbjct: 409  DTFVKPDNEIVDYNTRFSGVTEADV-----AKTSITLPQVQAILLSFFSAQTILIGHSLE 463

Query: 1082 KDFRVINLMVPKDQVLDTVYLF----HMPRKRMISLRFLAWYFLDLKIQG--ETHDSIED 1135
             D   + L+     V+DT  LF      P KR  SLR LA  +L   IQ   + H+S ED
Sbjct: 464  SDLLALKLI--HSTVVDTAVLFPHYLGFPYKR--SLRNLAADYLAQIIQDSQDGHNSSED 519

Query: 1136 ARTALQL 1142
            A   LQL
Sbjct: 520  ANACLQL 526


>gi|126273519 exonuclease GOR [Homo sapiens]
          Length = 675

 Score = 47.8 bits (112), Expect = 6e-05
 Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
            D ++    ++VDY T++SG+   D+     +K   TL      L          +GH L+
Sbjct: 532  DTFVKPDNEIVDYNTRFSGVTEADV-----AKTSITLPQVQAILLSFFSAQTILIGHSLE 586

Query: 1082 KDFRVINLMVPKDQVLDTVYLF----HMPRKRMISLRFLAWYFLDLKIQG--ETHDSIED 1135
             D   + L+     V+DT  LF      P KR  SLR LA  +L   IQ   + H+S ED
Sbjct: 587  SDLLALKLI--HSTVVDTAVLFPHYLGFPYKR--SLRNLAADYLAQIIQDSQDGHNSSED 642

Query: 1136 ARTALQL 1142
            A   LQL
Sbjct: 643  ASACLQL 649


>gi|145199237 transcription elongation factor B polypeptide 3 binding
            protein 1 [Homo sapiens]
          Length = 1221

 Score = 44.3 bits (103), Expect = 7e-04
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
            D ++    ++VDY T++SG+   DL     +    TL+     L  +       +GH L+
Sbjct: 1091 DTFVKPDNEIVDYNTRFSGVTEADL-----ADTSVTLRDVQAVLLSMFSADTILIGHSLE 1145

Query: 1082 KDFRVINLMVPKDQVLDTVYLF----HMPRKRMISLRFLAWYFLDLKIQG--ETHDSIED 1135
             D  ++ L V    V+DT  LF     +P KR  SLR L   +L   IQ   + H S ED
Sbjct: 1146 SD--LLALKVIHSTVVDTSVLFPHRLGLPYKR--SLRNLMADYLRQIIQDNVDGHSSSED 1201

Query: 1136 ARTALQL 1142
            A   + L
Sbjct: 1202 AGACMHL 1208


>gi|6857800 interferon stimulated exonuclease [Homo sapiens]
          Length = 181

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 15/136 (11%)

Query: 1017 GIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFV 1076
            G    D +I  + ++ DY T+ SG+ P  +   + +      +   L+L      G   V
Sbjct: 35   GAVLYDKFIRPEGEITDYRTRVSGVTPQHM---VGATPFAVARLEILQLL----KGKLVV 87

Query: 1077 GHGLQKDFRVINLMVPKDQVLDTVYLFHMPRK------RMISLRFLAWYFLDLKIQGET- 1129
            GH L+ DF+ +   +    + DT     + R+      R +SLR L+   L   IQ    
Sbjct: 88   GHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLL 147

Query: 1130 -HDSIEDARTALQLYR 1144
             H S+EDAR  ++LY+
Sbjct: 148  GHSSVEDARATMELYQ 163


>gi|76257392 ubiquitin specific protease 48 isoform b [Homo sapiens]
          Length = 485

 Score = 35.8 bits (81), Expect = 0.25
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 13/70 (18%)

Query: 838 EEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPI 897
           E + G YVY+L A ++H   S   G  +AH+K  ++           +WY FND   E I
Sbjct: 328 EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQS----------GEWYKFND---EDI 374

Query: 898 DKHEAVQFDM 907
           +K E  +  +
Sbjct: 375 EKMEGKKLQL 384


>gi|52630449 ubiquitin specific protease 48 isoform a [Homo sapiens]
          Length = 1035

 Score = 35.8 bits (81), Expect = 0.25
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 13/70 (18%)

Query: 838 EEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPI 897
           E + G YVY+L A ++H   S   G  +AH+K  ++           +WY FND   E I
Sbjct: 328 EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQS----------GEWYKFND---EDI 374

Query: 898 DKHEAVQFDM 907
           +K E  +  +
Sbjct: 375 EKMEGKKLQL 384


>gi|45267835 ubiquitin specific protease 50 [Homo sapiens]
          Length = 339

 Score = 35.4 bits (80), Expect = 0.33
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 7/128 (5%)

Query: 620 ILTQLHQDMQELEIPQAYRGAGGSS------FCSSGDSVIGQLFSCEMENCSLC-RCGSE 672
           +L +LH+ +++    +      GS+      + ++  S+I QLF  ++    +C +C   
Sbjct: 143 VLNELHEALKKYHYSRRRSYEKGSTQRCCRKWITTETSIITQLFEEQLNYSIVCLKCEKC 202

Query: 673 TVRASSTLLFTLSYPDDKTGKNYDFAQVLKRSICLDQNTQAWCDTCEKYQPTIQTRNIRH 732
           T +     +F+L  P        D  Q   +   L  N +  C  CE  Q T    +I  
Sbjct: 203 TYKNEVFTVFSLPIPSKYECSLRDCLQCFFQQDALTWNNEIHCSFCETKQETAVRASISK 262

Query: 733 LPDILVIN 740
            P I++ +
Sbjct: 263 APKIIIFH 270


>gi|32698815 ubiquitin thiolesterase 12 [Homo sapiens]
          Length = 370

 Score = 34.3 bits (77), Expect = 0.73
 Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 37/202 (18%)

Query: 739 INCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKEFALADWKELGSPEGVLVCPSIE 798
           + CE  SSK+ DF  +  +V    ++  H      N E   +++K          C S +
Sbjct: 187 LTCETISSKDEDFLDLSVDVEQNTSIT-HCLRGFSNTETLCSEYKYYCEE-----CRSKQ 240

Query: 799 E----LKNVWLPFSIRMKMTKNKGLDVCN-WTDGD-------EMQWGPARAEEEHGVYVY 846
           E    +K   LP  + + + + K +D  + +T          E++      +  +   +Y
Sbjct: 241 EAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMY 300

Query: 847 DLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKHEAVQF- 905
           DL+A VVH       G  +A +K            +H  W LF+D ++E ID     +F 
Sbjct: 301 DLVAVVVHCGSGPNRGHYIAIVK------------SHDFWLLFDDDIVEKIDAQAIEEFY 348

Query: 906 ------DMNWKVPAILYYVKRN 921
                   N +   IL+Y  R+
Sbjct: 349 GLTSDISKNSESGYILFYQSRD 370



 Score = 31.2 bits (69), Expect = 6.2
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 8/71 (11%)

Query: 500 KLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQ---KEFCL 556
           ++G E F    +    + GL       YCN ++Q LYF  P R  +  +  Q   KE  L
Sbjct: 26  EIGPEQFPVNEH----YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKESLL 81

Query: 557 ACELGFLFHML 567
            C L  LFH +
Sbjct: 82  TC-LADLFHSI 91


>gi|110347427 ubiquitin specific protease 34 [Homo sapiens]
          Length = 3546

 Score = 32.3 bits (72), Expect = 2.8
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 844  YVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPID 898
            Y YDL+   VH   +  GG   + I+     H  K    + +WYLFND  ++P D
Sbjct: 2146 YEYDLIGVTVHT-GTADGGHYYSFIRDIVNPHAYK----NNKWYLFNDAEVKPFD 2195


>gi|148539600 ubiquitin specific protease 53 [Homo sapiens]
          Length = 1073

 Score = 32.3 bits (72), Expect = 2.8
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 520 EPHIPNAYCNCMIQVLYFLEPVRC---LIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQ 576
           EP   + + N  +QVL+ L+  R    ++  H+CQ + C+ C L  +F     SR     
Sbjct: 35  EPGQNSCFLNSAVQVLWQLDIFRRSLRVLTGHVCQGDACIFCALKTIFAQFQHSREKALP 94

Query: 577 GNNFLRA 583
            +N   A
Sbjct: 95  SDNIRHA 101


>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 [Homo
            sapiens]
          Length = 916

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 9/83 (10%)

Query: 982  EEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGI 1041
            EEEA LR D T++ I+  +  +   + V+ +        +D  + + +  V +L      
Sbjct: 190  EEEARLRDD-TEAAIRALRKDIEEASLVKVE--------LDKKVQSLQDEVAFLRSNHEE 240

Query: 1042 KPGDLDAKISSKHLTTLKSTYLK 1064
            +  DL A+I + H+T  +  YLK
Sbjct: 241  EVADLLAQIQASHITVERKDYLK 263


>gi|11967991 SRY-box 17 [Homo sapiens]
          Length = 414

 Score = 31.2 bits (69), Expect = 6.2
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 371 ETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAPRRA-PPVDAE 429
           +T+ ALP ++  L P  W++ L P+  + V         + PA + APA        ++ 
Sbjct: 15  QTQSALPAVMAGLGPCPWAESLSPIGDMKVK-------GEAPANSGAPAGAAGRAKGESR 67

Query: 430 ILRTMKKVGFIGYAPNPRTRLRNQIP 455
           I R M    F+ +A + R RL  Q P
Sbjct: 68  IRRPMN--AFMVWAKDERKRLAQQNP 91


>gi|197116355 ubiquitin specific peptidase 46 isoform 2 [Homo
           sapiens]
          Length = 359

 Score = 31.2 bits (69), Expect = 6.2
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 12/61 (19%)

Query: 845 VYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKHEAVQ 904
           +YDL+A VVH       G  +  +K            +H  W LF+D ++E ID     +
Sbjct: 288 MYDLVAVVVHCGSGPNRGHYITIVK------------SHGFWLLFDDDIVEKIDAQAIEE 335

Query: 905 F 905
           F
Sbjct: 336 F 336



 Score = 30.8 bits (68), Expect = 8.1
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 501 LGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQ---KEFCLA 557
           +G E F    +    + GL       YCN ++Q LYF  P R  +  +  Q   KE  L 
Sbjct: 16  IGPEQFPINEH----YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLT 71

Query: 558 CELGFLFHML 567
           C L  LFH +
Sbjct: 72  C-LADLFHSI 80


>gi|31377709 ubiquitin specific peptidase 46 isoform 1 [Homo
           sapiens]
          Length = 366

 Score = 31.2 bits (69), Expect = 6.2
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 12/61 (19%)

Query: 845 VYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKHEAVQ 904
           +YDL+A VVH       G  +  +K            +H  W LF+D ++E ID     +
Sbjct: 295 MYDLVAVVVHCGSGPNRGHYITIVK------------SHGFWLLFDDDIVEKIDAQAIEE 342

Query: 905 F 905
           F
Sbjct: 343 F 343



 Score = 30.8 bits (68), Expect = 8.1
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 501 LGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQ---KEFCLA 557
           +G E F    +    + GL       YCN ++Q LYF  P R  +  +  Q   KE  L 
Sbjct: 23  IGPEQFPINEH----YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLT 78

Query: 558 CELGFLFHML 567
           C L  LFH +
Sbjct: 79  C-LADLFHSI 87


>gi|55770886 ubiquitin thiolesterase 3 [Homo sapiens]
          Length = 520

 Score = 31.2 bits (69), Expect = 6.2
 Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 22/145 (15%)

Query: 618 RFILTQLHQDMQ-------ELEIPQAYRGAGGSSFC--SSGDSVIGQLFSCEMENCSLCR 668
           R++L  LH ++Q          I Q       S+ C  +   +V+  +F   ++N   C 
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCL 325

Query: 669 -CGSETVRASSTLLFTLSYPDD---KTGKNYDFAQVLKRSICL---------DQNTQAWC 715
            CG+E+ +    L  +L  P     K  KN +   V     CL         D+     C
Sbjct: 326 ICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMC 385

Query: 716 DTCEKYQPTIQTRNIRHLPDILVIN 740
             C+K Q + +   I+ LP +L ++
Sbjct: 386 HKCKKKQKSTKKFWIQKLPKVLCLH 410


>gi|222446620 hypothetical protein LOC342346 [Homo sapiens]
          Length = 1141

 Score = 30.8 bits (68), Expect = 8.1
 Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 19/90 (21%)

Query: 340 ASKQALAFGDSEGCVHLWTDSPEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPL-SLI 398
           A   AL    + GC   +   P P   P               +P L+   +L P+ +L 
Sbjct: 307 AQPPALTPESAPGCTTEFAPGPAPGTEP---------------VPGLELGLELEPVPALG 351

Query: 399 PVP---LTTDTLLSDWPAANSAPAPRRAPP 425
           PVP   +T  +L + WP     PAP   PP
Sbjct: 352 PVPGPSVTPGSLPAPWPVLGPVPAPGAQPP 381


>gi|166235163 nuclear fragile X mental retardation protein
           interacting protein 1 [Homo sapiens]
          Length = 495

 Score = 30.8 bits (68), Expect = 8.1
 Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 18/77 (23%)

Query: 357 WTDSPE--PSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAA 414
           W  SPE  P+  P S           D+ PP D       L   P PLT     S  PAA
Sbjct: 14  WHASPELTPTLGPLS-----------DTAPPRDSWMFWAMLPPPPPPLT-----SSLPAA 57

Query: 415 NSAPAPRRAPPVDAEIL 431
            S P+    PP++A+ L
Sbjct: 58  GSKPSSESQPPMEAQSL 74


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,540,985
Number of Sequences: 37866
Number of extensions: 2177249
Number of successful extensions: 4980
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 4952
Number of HSP's gapped (non-prelim): 36
length of query: 1198
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1084
effective length of database: 13,930,794
effective search space: 15100980696
effective search space used: 15100980696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.