Guide to the Human Genome
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Name: LOC100131573 Sequence: fasta or formatted (302aa) NCBI GI: 169167993
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {302aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6          8           1
 C cysteine            3.3         10           2
 D aspartate           3.6         11           1
 E glutamate           6.3         19           2
 F phenylalanine       6.3         19           2
 G glycine             1.7          5           1
 H histidine           2.0          6           1
 I isoleucine          7.3         22           2
 K lysine              7.0         21           2
 L leucine            14.6         44           2
 M methionine          3.0          9           1
 N asparagine          6.3         19           1
 P proline             2.6          8           1
 Q glutamine           6.3         19           2
 R arginine            4.0         12           2
 S serine              7.9         24           2
 T threonine           5.0         15           2
 V valine              7.6         23           1
 W tryptophan          0.7          2           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100131573          1.000   PREDICTED: hypothetical protein 
FASTKD1               0.667   FAST kinase domains 1 
C6orf167              0.017   hypothetical protein LOC253714 
ABCA13                0.007   ATP binding cassette, sub-family A (ABC1), member 13...
VWA3A                 0.007   von Willebrand factor A domain containing 3A 
LAMA1                 0.005   laminin, alpha 1 precursor 
MAD2L2                0.005   MAD2 homolog 
MAD2L2                0.005   MAD2 homolog 
LRRIQ1                0.005   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.005   leucine-rich repeats and IQ motif containing 1 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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