Search of human proteins with 188219599

Search of human proteins with 188219599

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|188219599 N-myc and STAT interactor [Homo sapiens]
         (307 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|188219599 N-myc and STAT interactor [Homo sapiens]                 605   e-173
gi|24307901 interferon-induced protein 35 [Homo sapiens]              109   3e-24
gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Hom...    44   1e-04
gi|156104908 myosin heavy chain 6 [Homo sapiens]                       42   9e-04
gi|45238858 WD repeat domain 44 protein [Homo sapiens]                 38   0.013
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap...    38   0.013
gi|4503593 epidermal growth factor receptor pathway substrate 15...    37   0.017
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]               37   0.029
gi|229577185 epidermal growth factor receptor pathway substrate ...    36   0.037
gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens]              36   0.037
gi|50658069 phosphodiesterase 4D interacting protein isoform 2 [...    36   0.037
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ...    36   0.037
gi|221219020 NYD-SP11 protein [Homo sapiens]                           36   0.049
gi|50658077 phosphodiesterase 4D interacting protein isoform 4 [...    36   0.049
gi|50658075 phosphodiesterase 4D interacting protein isoform 3 [...    36   0.049
gi|218156275 hypothetical protein LOC374393 isoform b [Homo sapi...    36   0.049
gi|218156273 hypothetical protein LOC374393 isoform b [Homo sapi...    36   0.049
gi|39573718 hypothetical protein LOC374393 isoform a [Homo sapiens]    36   0.049
gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens]              35   0.064
gi|148747862 Rap guanine nucleotide exchange factor 3 isoform b ...    35   0.084
gi|20070215 Rap guanine nucleotide exchange factor 3 isoform b [...    35   0.084
gi|148747859 Rap guanine nucleotide exchange factor 3 isoform a ...    35   0.084
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...    35   0.084
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho...    35   0.084
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho...    35   0.084
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho...    35   0.084
gi|64085252 hypothetical protein LOC145508 [Homo sapiens]              35   0.084
gi|4503917 growth arrest-specific 8 [Homo sapiens]                     34   0.14 
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap...    33   0.24 
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi...    33   0.24 

>gi|188219599 N-myc and STAT interactor [Homo sapiens]
          Length = 307

 Score =  605 bits (1559), Expect = e-173
 Identities = 307/307 (100%), Positives = 307/307 (100%)

Query: 1   MEADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQI 60
           MEADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQI
Sbjct: 1   MEADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQI 60

Query: 61  KEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVS 120
           KEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVS
Sbjct: 61  KEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVS 120

Query: 121 MSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLREDQMRDKLELS 180
           MSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLREDQMRDKLELS
Sbjct: 121 MSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLREDQMRDKLELS 180

Query: 181 FSKSRNGGGEVDRVDYDRQSGSAVITFVEIGVADKILKKKEYPLYINQTCHRVTVSPYTE 240
           FSKSRNGGGEVDRVDYDRQSGSAVITFVEIGVADKILKKKEYPLYINQTCHRVTVSPYTE
Sbjct: 181 FSKSRNGGGEVDRVDYDRQSGSAVITFVEIGVADKILKKKEYPLYINQTCHRVTVSPYTE 240

Query: 241 IHLKKYQIFSGTSKRTVLLTGMEGIQMDEEIVEDLINIHFQRAKNGGGEVDVVKCSLGQP 300
           IHLKKYQIFSGTSKRTVLLTGMEGIQMDEEIVEDLINIHFQRAKNGGGEVDVVKCSLGQP
Sbjct: 241 IHLKKYQIFSGTSKRTVLLTGMEGIQMDEEIVEDLINIHFQRAKNGGGEVDVVKCSLGQP 300

Query: 301 HIAYFEE 307
           HIAYFEE
Sbjct: 301 HIAYFEE 307


>gi|24307901 interferon-induced protein 35 [Homo sapiens]
          Length = 288

 Score =  109 bits (273), Expect = 3e-24
 Identities = 78/268 (29%), Positives = 143/268 (53%), Gaps = 14/268 (5%)

Query: 43  EIQKLETELQEATKEFQIKEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQK 102
           ++Q+L  EL ++ K+ ++   +P+  + F      + +   S +S     + ++   +  
Sbjct: 25  DLQQLRKELGDSPKD-KVPFSVPKIPLVFRGHTQQDPEVPKSLVS-----NLRIHCPLLA 78

Query: 103 GQALITFEKEEVAQNVVSMSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYV--EVSKMKIN 160
           G ALITF+  +VA+ V+   +H + +++  L V  +P+ L      QV V  ++S  ++ 
Sbjct: 79  GSALITFDDPKVAEQVLQQKEHTINMEECRLRVQVQPLELPMVTTIQVMVSSQLSGRRVL 138

Query: 161 VTEIPDTLR--EDQMRDKLELSFSKSRNGGGEVDRVDYDRQSGSAVITFVEIGVADKILK 218
           VT  P +LR  E+++ DKLE+ F K+RNGGG+VD    +   GS ++ F   GVA ++ +
Sbjct: 139 VTGFPASLRLSEEELLDKLEIFFGKTRNGGGDVD--VRELLPGSVMLGFARDGVAQRLCQ 196

Query: 219 KKEYPLYINQTCHRVTVSPYTEIHLKKYQIFSGTSKRTVLLTGMEGIQMDEEIVEDLINI 278
             ++ + +      + VSPY    ++K +I S    R+VL+  +  I +D   + D++ I
Sbjct: 197 IGQFTVPLGGQQVPLRVSPYVNGEIQKAEIRSQPVPRSVLVLNIPDI-LDGPELHDVLEI 255

Query: 279 HFQRAKNGGGEVDVVK-CSLGQPHIAYF 305
           HFQ+   GGGEV+ +     GQ  +A F
Sbjct: 256 HFQKPTRGGGEVEALTVVPQGQQGLAVF 283



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 2/110 (1%)

Query: 99  EIQKGQALITFEKEEVAQNVVSMSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMK 158
           E+  G  ++ F ++ VAQ +  + +  V +    + +   P       + ++  +     
Sbjct: 175 ELLPGSVMLGFARDGVAQRLCQIGQFTVPLGGQQVPLRVSPYVNGEIQKAEIRSQPVPRS 234

Query: 159 INVTEIPDTLREDQMRDKLELSFSKSRNGGGEVDRVDY--DRQSGSAVIT 206
           + V  IPD L   ++ D LE+ F K   GGGEV+ +      Q G AV T
Sbjct: 235 VLVLNIPDILDGPELHDVLEIHFQKPTRGGGEVEALTVVPQGQQGLAVFT 284


>gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Homo
           sapiens]
          Length = 1801

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 40/241 (16%)

Query: 6   DDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEA--TKEFQIKED 63
           +D +Q + E    E +   Q KG      K  +QL     +++   +E   TKE + KED
Sbjct: 61  EDVRQKVLERKNHELVW--QGKGTF----KLTVQLPATPDEIDHVFEEELLTKESKTKED 114

Query: 64  IPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEE---------- 113
           + E  +      + E D++L  +         +P E +   +L+ FE  +          
Sbjct: 115 VKEPDV------SEELDTKLP-LDGGLDKMEDIPEECENISSLVAFENLKANVTDIMLIL 167

Query: 114 VAQNVVSMSKHHVQ---IKDVNLEVTAKPVPLNSGVRF------QVYVEVSKMKINVTEI 164
           + +N+  +S    Q   I+D ++ V      +++ +RF         ++  ++   + E+
Sbjct: 168 LVENISGLSNDDFQVEIIRDFDVAVVTFQKHIDT-IRFVDDCTKHHSIKQLQLSPRLLEV 226

Query: 165 PDTLREDQMRD-----KLELSFSKSRNGGGEVDRVDYDRQSGSAVITFVEIGVADKILKK 219
            +T+R + +        L+L F    NGGG V  V+Y  +  SA+I F +  V D I+  
Sbjct: 227 TNTIRVENLPPGADDYSLKLFFENPYNGGGRVANVEYFPEESSALIEFFDRKVLDTIMAT 286

Query: 220 K 220
           K
Sbjct: 287 K 287


>gi|156104908 myosin heavy chain 6 [Homo sapiens]
          Length = 1939

 Score = 41.6 bits (96), Expect = 9e-04
 Identities = 36/201 (17%), Positives = 95/201 (47%), Gaps = 16/201 (7%)

Query: 1    MEADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKN---IQLKKEIQKLETELQEATKE 57
            ++ D DD +  L +   ++   + + K L +E+   +    +L KE + L+   Q+A  +
Sbjct: 952  LKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDD 1011

Query: 58   FQIKEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQN 117
             Q++ED    K+  LS    + + Q+ ++  S +   KV  ++++ +  +  + +   ++
Sbjct: 1012 LQVEED----KVNSLSKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQES 1067

Query: 118  VVSMSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLREDQMR-DK 176
            ++ +    +Q+++   ++  K   +N     Q   ++   ++   ++   L+E+Q R ++
Sbjct: 1068 IMDLENDKLQLEE---KLKKKEFDIN-----QQNSKIEDEQVLALQLQKKLKENQARIEE 1119

Query: 177  LELSFSKSRNGGGEVDRVDYD 197
            LE      R    +V+++  D
Sbjct: 1120 LEEELEAERTARAKVEKLRSD 1140


>gi|45238858 WD repeat domain 44 protein [Homo sapiens]
          Length = 913

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 39  QLKKEIQK--LETELQEATKEFQIKEDIPETKMKFLSVETPEND----SQLSNISCSFQV 92
           +LK+++ K  +E+ ++E+ K  Q+++D  ++K K LS +   +     + LSNI     +
Sbjct: 54  ELKQDVSKKIIESIIEESQKVLQLEDDSLDSKGKELSDQATASPIVARTDLSNIPGLLAI 113

Query: 93  SSKVPYEIQKGQALITFEKEEV 114
              +P E QK ++  TFE+ E+
Sbjct: 114 DQVLPEESQKAESQNTFEETEL 135


>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
           sapiens]
          Length = 955

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 15/175 (8%)

Query: 7   DTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPE 66
           D   + +EH+    +   +   +I+E+ +   QLK+++Q+ E + ++  ++ + K  + +
Sbjct: 487 DINLLKQEHA----LSASKASSMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEK 542

Query: 67  TKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHV 126
           + +K +  E   +D Q S +    + + K  ++ ++       EKEE    V  + +   
Sbjct: 543 SHLKHI-YEKKAHDLQ-SELDKGKEDTQKKIHKFEEALK----EKEEQLTRVTEVQRLQA 596

Query: 127 QIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLREDQMRDKLELSF 181
           Q  D  LE   + V LNS    +VY E+ +    V    D  R   +R+K    F
Sbjct: 597 QQADAALEEFKRQVELNSE---KVYAEMKEQMEKVE--ADLTRSKSLREKQSKEF 646


>gi|4503593 epidermal growth factor receptor pathway substrate 15
           isoform A [Homo sapiens]
          Length = 896

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 18/196 (9%)

Query: 1   MEADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQL------KKEIQKLETELQEA 54
           ++ +K++ +Q LKE       +  + + L DE+ ++N  L      K+++Q+L  EL E 
Sbjct: 345 LQREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDELDE- 403

Query: 55  TKEFQIKEDIPETKMK------FLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALIT 108
            ++ Q++E + E + K       +S    E  SQ S IS   +  +K   E+ + Q    
Sbjct: 404 -QKAQLEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYEEELAKAREELSRLQQETA 462

Query: 109 FEKEEVAQNVVSMSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTL 168
             +E V      +      ++D   E+++  + L         +E    ++N    P ++
Sbjct: 463 ELEESVESGKAQLEPLQQHLQDSQQEISSMQMKLME----MKDLENHNSQLNWCSSPHSI 518

Query: 169 REDQMRDKLELSFSKS 184
             +   D   LS S S
Sbjct: 519 LVNGATDYCSLSTSSS 534


>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
          Length = 1946

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 30/177 (16%), Positives = 88/177 (49%), Gaps = 6/177 (3%)

Query: 4    DKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQE--ATKEFQIK 61
            + +  +++++E   +  +  E+ +G ++    K +  + E+ + + EL+   + K+ +I+
Sbjct: 1537 EMEKVKKLIEEEKTEVQVTLEETEGALERNESKILHFQLELLEAKAELERKLSEKDEEIE 1596

Query: 62   EDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVSM 121
                + +    S+++  +    S I  + ++  K+  ++ + +  ++    +V++   S+
Sbjct: 1597 NFRRKQQCTIDSLQSSLDSEAKSRIEVT-RLKKKMEEDLNEMELQLSCANRQVSEATKSL 1655

Query: 122  SKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPD--TLREDQMRDK 176
             +  +QIKD+ +++      LNS ++ QV V   +  +  +E+ D  +L+E   R +
Sbjct: 1656 GQLQIQIKDLQMQLD-DSTQLNSDLKEQVAVAERRNSLLQSELEDLRSLQEQTERGR 1711


>gi|229577185 epidermal growth factor receptor pathway substrate 15
           isoform B [Homo sapiens]
          Length = 582

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 18/193 (9%)

Query: 4   DKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQL------KKEIQKLETELQEATKE 57
           +K++ +Q LKE       +  + + L DE+ ++N  L      K+++Q+L  EL E  ++
Sbjct: 34  EKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDELDE--QK 91

Query: 58  FQIKEDIPETKMK------FLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEK 111
            Q++E + E + K       +S    E  SQ S IS   +  +K   E+ + Q      +
Sbjct: 92  AQLEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYEEELAKAREELSRLQQETAELE 151

Query: 112 EEVAQNVVSMSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLRED 171
           E V      +      ++D   E+++  + L         +E    ++N    P ++  +
Sbjct: 152 ESVESGKAQLEPLQQHLQDSQQEISSMQMKLME----MKDLENHNSQLNWCSSPHSILVN 207

Query: 172 QMRDKLELSFSKS 184
              D   LS S S
Sbjct: 208 GATDYCSLSTSSS 220


>gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens]
          Length = 284

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 16/181 (8%)

Query: 2   EADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQIK 61
           EADK   +   K+   ++    ++ KG  DE+ K +  +K+  +KLE   ++AT     +
Sbjct: 26  EADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKAT---DAE 82

Query: 62  EDIPETKMKFLSVETPENDSQ--LSNISCSFQVSSKVPYEIQKG------QALITFEKEE 113
            D+     +   VE   + +Q  L+      + + K   E ++G      +A+   EK E
Sbjct: 83  ADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKME 142

Query: 114 VAQNVVSMSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLREDQM 173
           + +  +  +KH  +  D   E  A+ + +  G      +E S+ +  V E      E+++
Sbjct: 143 LQEMQLKEAKHIAEDSDRKYEEVARKLVILEG-----ELERSEERAEVAESRARQLEEEL 197

Query: 174 R 174
           R
Sbjct: 198 R 198


>gi|50658069 phosphodiesterase 4D interacting protein isoform 2
           [Homo sapiens]
          Length = 969

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 48/222 (21%), Positives = 102/222 (45%), Gaps = 39/222 (17%)

Query: 31  DEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFLSVETPENDSQLSNISCSF 90
           ++I K+NI+LK E++ L+ ELQ+       K+ + +T     ++ + +N+++L       
Sbjct: 42  EDIYKRNIELKVEVESLKRELQDK------KQHLDKTWADVENLNS-QNEAELRRQFEER 94

Query: 91  QVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHVQI-KDVNLEVTAKPVPLNSGVRFQ 149
           Q  ++  YE+ + +  +  E+  +A+N  +     V+  K+ NLE++ K           
Sbjct: 95  QQETEHVYELLENKIQLLQEESRLAKNEAARMAALVEAEKECNLELSEK----------- 143

Query: 150 VYVEVSKMKINVTEIP-DTLREDQMRDKLELSFSKSRNGGGEVDRVDYDRQSGSAVITFV 208
               +  +  N  ++P D ++ DQ  + L               R++   QS +A    V
Sbjct: 144 ----LKGVTKNWEDVPGDQVKPDQYTEAL----------AQRDKRIEELNQSLAAQERLV 189

Query: 209 EIGVADKILKKKEYPLYINQTCHRVTVSPYTEIHLKKYQIFS 250
           E     ++ ++K+  L++ +    + V P TE  LK+ ++ S
Sbjct: 190 E-----QLSREKQQLLHLLEEPTSMEVQPMTEELLKQQKLNS 226


>gi|157311604 phosphodiesterase 4D interacting protein isoform 1
           [Homo sapiens]
          Length = 2346

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 48/222 (21%), Positives = 102/222 (45%), Gaps = 39/222 (17%)

Query: 31  DEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFLSVETPENDSQLSNISCSF 90
           ++I K+NI+LK E++ L+ ELQ+       K+ + +T     ++ + +N+++L       
Sbjct: 42  EDIYKRNIELKVEVESLKRELQDK------KQHLDKTWADVENLNS-QNEAELRRQFEER 94

Query: 91  QVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHVQI-KDVNLEVTAKPVPLNSGVRFQ 149
           Q  ++  YE+ + +  +  E+  +A+N  +     V+  K+ NLE++ K           
Sbjct: 95  QQETEHVYELLENKIQLLQEESRLAKNEAARMAALVEAEKECNLELSEK----------- 143

Query: 150 VYVEVSKMKINVTEIP-DTLREDQMRDKLELSFSKSRNGGGEVDRVDYDRQSGSAVITFV 208
               +  +  N  ++P D ++ DQ  + L               R++   QS +A    V
Sbjct: 144 ----LKGVTKNWEDVPGDQVKPDQYTEAL----------AQRDKRIEELNQSLAAQERLV 189

Query: 209 EIGVADKILKKKEYPLYINQTCHRVTVSPYTEIHLKKYQIFS 250
           E     ++ ++K+  L++ +    + V P TE  LK+ ++ S
Sbjct: 190 E-----QLSREKQQLLHLLEEPTSMEVQPMTEELLKQQKLNS 226


>gi|221219020 NYD-SP11 protein [Homo sapiens]
          Length = 2873

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 24/114 (21%), Positives = 60/114 (52%), Gaps = 3/114 (2%)

Query: 1    MEADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQI 60
            + +++++ ++  +E   +E  ++E+ +   +E  +K ++ K+E +K + + ++  +E Q 
Sbjct: 2243 LSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVE-KEEEEKKKKKKEKKKEEVQE 2301

Query: 61   KEDIPETKMKFLSVETPE--NDSQLSNISCSFQVSSKVPYEIQKGQALITFEKE 112
            KE++ E K + +S E  E  +D +    SCS +       EI K +     +++
Sbjct: 2302 KEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQ 2355


>gi|50658077 phosphodiesterase 4D interacting protein isoform 4
           [Homo sapiens]
          Length = 173

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 27/109 (24%), Positives = 59/109 (54%), Gaps = 8/109 (7%)

Query: 31  DEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFLSVETPENDSQLSNISCSF 90
           ++I K+NI+LK E++ L+ ELQ+       K+ + +T     ++ + +N+++L       
Sbjct: 42  EDIYKRNIELKVEVESLKRELQDK------KQHLDKTWADVENLNS-QNEAELRRQFEER 94

Query: 91  QVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHVQI-KDVNLEVTAK 138
           Q  ++  YE+ + +  +  E+  +A+N  +     V+  K+ NLE++ K
Sbjct: 95  QQETEHVYELLENKIQLLQEESRLAKNEAARMAALVEAEKECNLELSEK 143


>gi|50658075 phosphodiesterase 4D interacting protein isoform 3
           [Homo sapiens]
          Length = 310

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 27/109 (24%), Positives = 59/109 (54%), Gaps = 8/109 (7%)

Query: 31  DEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFLSVETPENDSQLSNISCSF 90
           ++I K+NI+LK E++ L+ ELQ+       K+ + +T     ++ + +N+++L       
Sbjct: 179 EDIYKRNIELKVEVESLKRELQDK------KQHLDKTWADVENLNS-QNEAELRRQFEER 231

Query: 91  QVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHVQI-KDVNLEVTAK 138
           Q  ++  YE+ + +  +  E+  +A+N  +     V+  K+ NLE++ K
Sbjct: 232 QQETEHVYELLENKIQLLQEESRLAKNEAARMAALVEAEKECNLELSEK 280


>gi|218156275 hypothetical protein LOC374393 isoform b [Homo
           sapiens]
          Length = 704

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 19/163 (11%)

Query: 13  KEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFL 72
           K +     + +   K L  +I+KK    +K+I K   + + AT E   +  I   K    
Sbjct: 218 KIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKK---- 273

Query: 73  SVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHV-----Q 127
            V  P+ D +  ++  S +       +I   Q L  + K++  Q +  +  ++      +
Sbjct: 274 KVHKPKKDGETKDVEHSRE-------QILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRK 326

Query: 128 IKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLRE 170
            + +N +V  +P   + G R+ + ++V K  IN+ +   TL E
Sbjct: 327 YRQINSQVRRRP---HLGRRYAINLDVQKEAINLLKNYQTLNE 366


>gi|218156273 hypothetical protein LOC374393 isoform b [Homo
           sapiens]
          Length = 704

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 19/163 (11%)

Query: 13  KEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFL 72
           K +     + +   K L  +I+KK    +K+I K   + + AT E   +  I   K    
Sbjct: 218 KIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKK---- 273

Query: 73  SVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHV-----Q 127
            V  P+ D +  ++  S +       +I   Q L  + K++  Q +  +  ++      +
Sbjct: 274 KVHKPKKDGETKDVEHSRE-------QILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRK 326

Query: 128 IKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLRE 170
            + +N +V  +P   + G R+ + ++V K  IN+ +   TL E
Sbjct: 327 YRQINSQVRRRP---HLGRRYAINLDVQKEAINLLKNYQTLNE 366


>gi|39573718 hypothetical protein LOC374393 isoform a [Homo sapiens]
          Length = 734

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 19/163 (11%)

Query: 13  KEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFL 72
           K +     + +   K L  +I+KK    +K+I K   + + AT E   +  I   K    
Sbjct: 248 KIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKK---- 303

Query: 73  SVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHV-----Q 127
            V  P+ D +  ++  S +       +I   Q L  + K++  Q +  +  ++      +
Sbjct: 304 KVHKPKKDGETKDVEHSRE-------QILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRK 356

Query: 128 IKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLRE 170
            + +N +V  +P   + G R+ + ++V K  IN+ +   TL E
Sbjct: 357 YRQINSQVRRRP---HLGRRYAINLDVQKEAINLLKNYQTLNE 396


>gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens]
          Length = 284

 Score = 35.4 bits (80), Expect = 0.064
 Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 13/167 (7%)

Query: 2   EADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQIK 61
           EADK   +   K+   ++    ++ KG  DE+ K +  +K+  +KLE   ++AT     +
Sbjct: 26  EADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKAT---DAE 82

Query: 62  EDIPETKMKFLSVETPENDSQ--LSNISCSFQVSSKVPYEIQKG------QALITFEKEE 113
            D+     +   VE   + +Q  L+      + + K   E ++G      +A+   EK E
Sbjct: 83  ADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKME 142

Query: 114 VAQNVVSMSKHHVQIKDVNLEVTAKPVPLNSG--VRFQVYVEVSKMK 158
           + +  +  +KH  +  D   E  A+ + +  G   R +   EV++ K
Sbjct: 143 LQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSEERAEVAESK 189


>gi|148747862 Rap guanine nucleotide exchange factor 3 isoform b
           [Homo sapiens]
          Length = 881

 Score = 35.0 bits (79), Expect = 0.084
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 65  PETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEI 100
           P+ K + L V  P  D  L   SC+ QV  KVPY+I
Sbjct: 487 PQMKARNLPVWLPNQDEPLPGSSCAIQVGDKVPYDI 522


>gi|20070215 Rap guanine nucleotide exchange factor 3 isoform b
           [Homo sapiens]
          Length = 881

 Score = 35.0 bits (79), Expect = 0.084
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 65  PETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEI 100
           P+ K + L V  P  D  L   SC+ QV  KVPY+I
Sbjct: 487 PQMKARNLPVWLPNQDEPLPGSSCAIQVGDKVPYDI 522


>gi|148747859 Rap guanine nucleotide exchange factor 3 isoform a
           [Homo sapiens]
          Length = 923

 Score = 35.0 bits (79), Expect = 0.084
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 65  PETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEI 100
           P+ K + L V  P  D  L   SC+ QV  KVPY+I
Sbjct: 529 PQMKARNLPVWLPNQDEPLPGSSCAIQVGDKVPYDI 564


>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
            sapiens]
          Length = 1972

 Score = 35.0 bits (79), Expect = 0.084
 Identities = 30/139 (21%), Positives = 73/139 (52%), Gaps = 12/139 (8%)

Query: 1    MEADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQE---ATKE 57
            + A K + ++IL  H  +  +++E+++G   ++  +  ++ +++  LE +L+E   A ++
Sbjct: 913  LAAKKQELEEIL--HEMEARLEEEEDRG--QQLQAERKKMAQQMLDLEEQLEEEEAARQK 968

Query: 58   FQIKEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQN 117
             Q+++   E K+K L  E    D Q + +S   ++  +   ++    A    E+EE A+N
Sbjct: 969  LQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLA----EEEEKAKN 1024

Query: 118  VVSM-SKHHVQIKDVNLEV 135
            +  + +KH   I ++ + +
Sbjct: 1025 LTKLKNKHESMISELEVRL 1043



 Score = 28.5 bits (62), Expect = 7.8
 Identities = 39/218 (17%), Positives = 88/218 (40%), Gaps = 27/218 (12%)

Query: 2    EADKDDTQQILKE-HSPDEFIKDEQNKGLIDEITKKN---------------IQLKKEIQ 45
            E +++  +Q+ ++ H  +  ++DE+ +  +    KK                I+ ++E  
Sbjct: 1585 EQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGREEAI 1644

Query: 46   KLETELQEATKEFQIKEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQA 105
            K   +LQ   K+FQ + +        +     EN+ +  ++        +     ++ + 
Sbjct: 1645 KQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARK 1704

Query: 106  LITFEKEEVAQNVVSMSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIP 165
                EKEE+A+ + S       ++D    + A+   L          E+ + + N+  + 
Sbjct: 1705 QADLEKEELAEELASSLSGRNALQDEKRRLEARIAQLEE--------ELEEEQGNMEAMS 1756

Query: 166  DTLRE-DQMRDKL--ELSFSKSRNGGGEVDRVDYDRQS 200
            D +R+  Q  ++L  EL+  +S     E  R   +RQ+
Sbjct: 1757 DRVRKATQQAEQLSNELATERSTAQKNESARQQLERQN 1794


>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
            sapiens]
          Length = 1979

 Score = 35.0 bits (79), Expect = 0.084
 Identities = 30/139 (21%), Positives = 73/139 (52%), Gaps = 12/139 (8%)

Query: 1    MEADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQE---ATKE 57
            + A K + ++IL  H  +  +++E+++G   ++  +  ++ +++  LE +L+E   A ++
Sbjct: 920  LAAKKQELEEIL--HEMEARLEEEEDRG--QQLQAERKKMAQQMLDLEEQLEEEEAARQK 975

Query: 58   FQIKEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQN 117
             Q+++   E K+K L  E    D Q + +S   ++  +   ++    A    E+EE A+N
Sbjct: 976  LQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLA----EEEEKAKN 1031

Query: 118  VVSM-SKHHVQIKDVNLEV 135
            +  + +KH   I ++ + +
Sbjct: 1032 LTKLKNKHESMISELEVRL 1050



 Score = 28.5 bits (62), Expect = 7.8
 Identities = 39/218 (17%), Positives = 88/218 (40%), Gaps = 27/218 (12%)

Query: 2    EADKDDTQQILKE-HSPDEFIKDEQNKGLIDEITKKN---------------IQLKKEIQ 45
            E +++  +Q+ ++ H  +  ++DE+ +  +    KK                I+ ++E  
Sbjct: 1592 EQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGREEAI 1651

Query: 46   KLETELQEATKEFQIKEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQA 105
            K   +LQ   K+FQ + +        +     EN+ +  ++        +     ++ + 
Sbjct: 1652 KQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARK 1711

Query: 106  LITFEKEEVAQNVVSMSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIP 165
                EKEE+A+ + S       ++D    + A+   L          E+ + + N+  + 
Sbjct: 1712 QADLEKEELAEELASSLSGRNALQDEKRRLEARIAQLEE--------ELEEEQGNMEAMS 1763

Query: 166  DTLRE-DQMRDKL--ELSFSKSRNGGGEVDRVDYDRQS 200
            D +R+  Q  ++L  EL+  +S     E  R   +RQ+
Sbjct: 1764 DRVRKATQQAEQLSNELATERSTAQKNESARQQLERQN 1801


>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
            sapiens]
          Length = 1945

 Score = 35.0 bits (79), Expect = 0.084
 Identities = 30/139 (21%), Positives = 73/139 (52%), Gaps = 12/139 (8%)

Query: 1    MEADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQE---ATKE 57
            + A K + ++IL  H  +  +++E+++G   ++  +  ++ +++  LE +L+E   A ++
Sbjct: 920  LAAKKQELEEIL--HEMEARLEEEEDRG--QQLQAERKKMAQQMLDLEEQLEEEEAARQK 975

Query: 58   FQIKEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQN 117
             Q+++   E K+K L  E    D Q + +S   ++  +   ++    A    E+EE A+N
Sbjct: 976  LQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLA----EEEEKAKN 1031

Query: 118  VVSM-SKHHVQIKDVNLEV 135
            +  + +KH   I ++ + +
Sbjct: 1032 LTKLKNKHESMISELEVRL 1050



 Score = 28.5 bits (62), Expect = 7.8
 Identities = 39/218 (17%), Positives = 88/218 (40%), Gaps = 27/218 (12%)

Query: 2    EADKDDTQQILKE-HSPDEFIKDEQNKGLIDEITKKN---------------IQLKKEIQ 45
            E +++  +Q+ ++ H  +  ++DE+ +  +    KK                I+ ++E  
Sbjct: 1592 EQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGREEAI 1651

Query: 46   KLETELQEATKEFQIKEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQA 105
            K   +LQ   K+FQ + +        +     EN+ +  ++        +     ++ + 
Sbjct: 1652 KQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARK 1711

Query: 106  LITFEKEEVAQNVVSMSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIP 165
                EKEE+A+ + S       ++D    + A+   L          E+ + + N+  + 
Sbjct: 1712 QADLEKEELAEELASSLSGRNALQDEKRRLEARIAQLEE--------ELEEEQGNMEAMS 1763

Query: 166  DTLRE-DQMRDKL--ELSFSKSRNGGGEVDRVDYDRQS 200
            D +R+  Q  ++L  EL+  +S     E  R   +RQ+
Sbjct: 1764 DRVRKATQQAEQLSNELATERSTAQKNESARQQLERQN 1801


>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
            sapiens]
          Length = 1938

 Score = 35.0 bits (79), Expect = 0.084
 Identities = 30/139 (21%), Positives = 73/139 (52%), Gaps = 12/139 (8%)

Query: 1    MEADKDDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQE---ATKE 57
            + A K + ++IL  H  +  +++E+++G   ++  +  ++ +++  LE +L+E   A ++
Sbjct: 913  LAAKKQELEEIL--HEMEARLEEEEDRG--QQLQAERKKMAQQMLDLEEQLEEEEAARQK 968

Query: 58   FQIKEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQN 117
             Q+++   E K+K L  E    D Q + +S   ++  +   ++    A    E+EE A+N
Sbjct: 969  LQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLA----EEEEKAKN 1024

Query: 118  VVSM-SKHHVQIKDVNLEV 135
            +  + +KH   I ++ + +
Sbjct: 1025 LTKLKNKHESMISELEVRL 1043



 Score = 28.5 bits (62), Expect = 7.8
 Identities = 39/218 (17%), Positives = 88/218 (40%), Gaps = 27/218 (12%)

Query: 2    EADKDDTQQILKE-HSPDEFIKDEQNKGLIDEITKKN---------------IQLKKEIQ 45
            E +++  +Q+ ++ H  +  ++DE+ +  +    KK                I+ ++E  
Sbjct: 1585 EQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGREEAI 1644

Query: 46   KLETELQEATKEFQIKEDIPETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQA 105
            K   +LQ   K+FQ + +        +     EN+ +  ++        +     ++ + 
Sbjct: 1645 KQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARK 1704

Query: 106  LITFEKEEVAQNVVSMSKHHVQIKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIP 165
                EKEE+A+ + S       ++D    + A+   L          E+ + + N+  + 
Sbjct: 1705 QADLEKEELAEELASSLSGRNALQDEKRRLEARIAQLEE--------ELEEEQGNMEAMS 1756

Query: 166  DTLRE-DQMRDKL--ELSFSKSRNGGGEVDRVDYDRQS 200
            D +R+  Q  ++L  EL+  +S     E  R   +RQ+
Sbjct: 1757 DRVRKATQQAEQLSNELATERSTAQKNESARQQLERQN 1794


>gi|64085252 hypothetical protein LOC145508 [Homo sapiens]
          Length = 1094

 Score = 35.0 bits (79), Expect = 0.084
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 19/130 (14%)

Query: 24  EQNKGLIDEITKKNIQLKKEIQKLETELQEA---------------TKEFQIKEDIPETK 68
           E+    +DE+T KN Q+ KE  +L+T+L  A               TK    +E++   +
Sbjct: 505 EKQSETVDELTGKNNQILKEKDELKTQLYAALQQIENLRKELNDVLTKRALQEEELHSKE 564

Query: 69  MKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKG---QALITFEKEEVAQNVVSMSKHH 125
            K   +++ + D +L  +  S     ++  E++K    Q+ +  EK  + + +  + K  
Sbjct: 565 EKLRDIKSHQADLEL-EVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQ 623

Query: 126 VQIKDVNLEV 135
            Q K   LE+
Sbjct: 624 AQDKAKLLEM 633


>gi|4503917 growth arrest-specific 8 [Homo sapiens]
          Length = 478

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 19/165 (11%)

Query: 32  EITKKNIQLKK-EIQKLETELQEATKEFQIKEDIPETKMKFLSVETPENDSQLSNISCSF 90
           EIT++ ++ KK E++  + E++EA +  Q++  + + K+K L  E   N +++       
Sbjct: 64  EITRRQLEEKKAELRNKDREMEEAEERHQVEIKVYKQKVKHLLYEHQNNLTEMKAEGTVV 123

Query: 91  QVSSKVPYEIQKG------QAL-ITFEKEEVAQNVVSMSKHHVQIKDVNLEVTAKPVPLN 143
              ++  + IQ+       +AL +  +++E+A  VV        +K++ L+ T +   + 
Sbjct: 124 MKLAQKEHRIQESVLRKDMRALKVELKEQELASEVV--------VKNLRLKHTEEITRMR 175

Query: 144 SGVRFQVYVEVSKMKINVTEIPDTLREDQMRDKLELSFSKSRNGG 188
           +    QV    +K    +  + D L    +R K EL   + R  G
Sbjct: 176 NDFERQVREIEAKYDKKMKMLRDEL---DLRRKTELHEVEERKNG 217


>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
           sapiens]
          Length = 603

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 12/193 (6%)

Query: 6   DDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEA-TKEFQIKEDI 64
           +DT + LK+       + E+ K   +E  K   +L+ +IQ+L TE ++  T  + +K  +
Sbjct: 89  NDTIKSLKQQKKQVEHQLEEEKKANNEKQKAERELEGQIQRLNTEKKKLNTDLYHMKHSL 148

Query: 65  P--ETKMKFLSVETPENDSQLSNIS---CSFQVSSKVPYE--IQKGQALITFEKEEVAQN 117
              E + K L+     +  ++  +    C+   + K   +    + +AL+  + E+  + 
Sbjct: 149 RYFEEESKDLAGRLQRSSQRIGELEWSLCAVAATQKKKPDGFSSRSKALLKRQLEQSIRE 208

Query: 118 VVSMSKHHVQIKDVNLEVTAKP---VPLNSGVRFQVYVEVSKMKINVTEIPDTLREDQMR 174
            + +  H  Q+K+   EV  +         G R Q    + KM   V  + +  + D  R
Sbjct: 209 QILLKGHVTQLKESLKEVQLERDQYAEQIKGERAQWQQRMRKMSQEVCTLKEEKKHDTHR 268

Query: 175 -DKLELSFSKSRN 186
            ++LE S S+ +N
Sbjct: 269 VEELERSLSRLKN 281


>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
           sapiens]
          Length = 603

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 12/193 (6%)

Query: 6   DDTQQILKEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEA-TKEFQIKEDI 64
           +DT + LK+       + E+ K   +E  K   +L+ +IQ+L TE ++  T  + +K  +
Sbjct: 89  NDTIKSLKQQKKQVEHQLEEEKKANNEKQKAERELEGQIQRLNTEKKKLNTDLYHMKHSL 148

Query: 65  P--ETKMKFLSVETPENDSQLSNIS---CSFQVSSKVPYE--IQKGQALITFEKEEVAQN 117
              E + K L+     +  ++  +    C+   + K   +    + +AL+  + E+  + 
Sbjct: 149 RYFEEESKDLAGRLQRSSQRIGELEWSLCAVAATQKKKPDGFSSRSKALLKRQLEQSIRE 208

Query: 118 VVSMSKHHVQIKDVNLEVTAKP---VPLNSGVRFQVYVEVSKMKINVTEIPDTLREDQMR 174
            + +  H  Q+K+   EV  +         G R Q    + KM   V  + +  + D  R
Sbjct: 209 QILLKGHVTQLKESLKEVQLERDQYAEQIKGERAQWQQRMRKMSQEVCTLKEEKKHDTHR 268

Query: 175 -DKLELSFSKSRN 186
            ++LE S S+ +N
Sbjct: 269 VEELERSLSRLKN 281


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.131    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,584,097
Number of Sequences: 37866
Number of extensions: 435825
Number of successful extensions: 2138
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 1872
Number of HSP's gapped (non-prelim): 406
length of query: 307
length of database: 18,247,518
effective HSP length: 102
effective length of query: 205
effective length of database: 14,385,186
effective search space: 2948963130
effective search space used: 2948963130
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.