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Search of human proteins with 188035871
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|188035871 SET and MYND domain containing 2 [Homo sapiens]
(433 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|188035871 SET and MYND domain containing 2 [Homo sapiens] 897 0.0
gi|38093643 SET and MYND domain containing 1 [Homo sapiens] 231 1e-60
gi|12232401 SET and MYND domain containing 3 [Homo sapiens] 191 8e-49
gi|154689858 SMYD family member 5 [Homo sapiens] 70 4e-12
gi|156616308 SET and MYND domain containing 4 [Homo sapiens] 69 8e-12
gi|67782303 zinc finger, MYND domain containing 17 [Homo sapiens] 49 9e-06
gi|13489073 egl nine homolog 1 [Homo sapiens] 48 2e-05
gi|38505161 tudor domain containing 1 [Homo sapiens] 46 8e-05
gi|19923997 zinc finger, MYND domain containing 19 [Homo sapiens] 46 8e-05
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens] 42 0.001
gi|31543169 suppressor of variegation 4-20 homolog 2 [Homo sapiens] 40 0.004
gi|28461129 ankyrin repeat and MYND domain containing 2 [Homo sa... 39 0.007
gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens] 38 0.020
gi|50659084 suppressor of variegation 4-20 homolog 1 isoform 2 [... 38 0.020
gi|50659082 suppressor of variegation 4-20 homolog 1 isoform 1 [... 38 0.020
gi|38016945 deformed epidermal autoregulatory factor 1 [Homo sap... 36 0.078
gi|239749940 PREDICTED: similar to deformed epidermal autoregula... 36 0.078
gi|89353295 core-binding factor, runt domain, alpha subunit 2; t... 35 0.13
gi|74229008 core-binding factor, runt domain, alpha subunit 2; t... 35 0.13
gi|4826663 core-binding factor, runt domain, alpha subunit 2; tr... 35 0.13
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 35 0.17
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 35 0.17
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 35 0.17
gi|21735594 programmed cell death 2 isoform 2 [Homo sapiens] 33 0.39
gi|21735592 programmed cell death 2 isoform 1 [Homo sapiens] 33 0.39
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein... 33 0.50
gi|28329419 acute myelogenous leukemia 1 translocation 1 protein... 33 0.50
gi|28329416 acute myelogenous leukemia 1 translocation 1 protein... 33 0.50
gi|4757916 acute myelogenous leukemia 1 translocation 1 protein ... 33 0.50
gi|28872803 myeloid translocation gene on chromosome 16 isoform ... 33 0.50
>gi|188035871 SET and MYND domain containing 2 [Homo sapiens]
Length = 433
Score = 897 bits (2317), Expect = 0.0
Identities = 433/433 (100%), Positives = 433/433 (100%)
Query: 1 MRAEGLGGLERFCSPGKGRGLRALQPFQVGDLLFSCPAYAYVLTVNERGNHCEYCFTRKE 60
MRAEGLGGLERFCSPGKGRGLRALQPFQVGDLLFSCPAYAYVLTVNERGNHCEYCFTRKE
Sbjct: 1 MRAEGLGGLERFCSPGKGRGLRALQPFQVGDLLFSCPAYAYVLTVNERGNHCEYCFTRKE 60
Query: 61 GLSKCGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWNPSETVRLTARILAKQKIHP 120
GLSKCGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWNPSETVRLTARILAKQKIHP
Sbjct: 61 GLSKCGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWNPSETVRLTARILAKQKIHP 120
Query: 121 ERTPSEKLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHLGFPDNDSLVVLFAQVN 180
ERTPSEKLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHLGFPDNDSLVVLFAQVN
Sbjct: 121 ERTPSEKLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHLGFPDNDSLVVLFAQVN 180
Query: 181 CNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIKPGEEVFTSY 240
CNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIKPGEEVFTSY
Sbjct: 181 CNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIKPGEEVFTSY 240
Query: 241 IDLLYPTEDRNDRLRDSYFFTCECQECTTKDKDKAKVEIRKLSDPPKAEAIRDMVRYARN 300
IDLLYPTEDRNDRLRDSYFFTCECQECTTKDKDKAKVEIRKLSDPPKAEAIRDMVRYARN
Sbjct: 241 IDLLYPTEDRNDRLRDSYFFTCECQECTTKDKDKAKVEIRKLSDPPKAEAIRDMVRYARN 300
Query: 301 VIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGAL 360
VIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGAL
Sbjct: 301 VIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGAL 360
Query: 361 QYGQKIIKPYSKHYPLYSLNVASMWLKLGRLYMGLEHKAAGEKALKKAIAIMEVAHGKDH 420
QYGQKIIKPYSKHYPLYSLNVASMWLKLGRLYMGLEHKAAGEKALKKAIAIMEVAHGKDH
Sbjct: 361 QYGQKIIKPYSKHYPLYSLNVASMWLKLGRLYMGLEHKAAGEKALKKAIAIMEVAHGKDH 420
Query: 421 PYISEIKQEIESH 433
PYISEIKQEIESH
Sbjct: 421 PYISEIKQEIESH 433
>gi|38093643 SET and MYND domain containing 1 [Homo sapiens]
Length = 490
Score = 231 bits (589), Expect = 1e-60
Identities = 130/433 (30%), Positives = 227/433 (52%), Gaps = 17/433 (3%)
Query: 9 LERFCSPGKGRGLRALQPFQVGDLLFSCPAYAYVLTVNERGNHCEYCFTRKEGLSKCGRC 68
+E F + GKGRGL+A + F D++F+ AY+ V+ + C CF R+E L +CG+C
Sbjct: 9 VEVFTAEGKGRGLKATKEFWAADIIFAERAYSAVVFDSLVNFVCHTCFKRQEKLHRCGQC 68
Query: 69 KQAFYCNVECQKEDWPMHKLECSPMVVFGENWNPSETVRLTARILAKQKIHPERTPSEKL 128
K A YC+ CQK+ W HK ECS + +G+ P+E +RL ARI+ + + L
Sbjct: 69 KFAHYCDRTCQKDAWLNHKNECSAIKRYGKV--PNENIRLAARIMWRVEREGTGLTEGCL 126
Query: 129 LAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHLGFPDNDSLVVLFAQVNCNGFTIED 188
++V + ++H++ E++ ++ D+ ++ + +F +NCNGFT+ D
Sbjct: 127 VSVDDLQNHVEHFGEEEQKDLRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLSD 186
Query: 189 EE-LSHLGSAIFPDVALMNHSCCPNVIVTYKG-------------TLAEVRAVQEIKPGE 234
+ L +G IFP++ L+NH C PN V + E+RA+ +I GE
Sbjct: 187 QRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGE 246
Query: 235 EVFTSYIDLLYPTEDRNDRLRDSYFFTCECQECTTKDKDKAKVEIRKLSDPPKAEAIRDM 294
E+ SYID L +E+R +L+ Y+F C C+ C K KD + ++ + P E +++M
Sbjct: 247 ELTVSYIDFLNVSEERKRQLKKQYYFDCTCEHCQKKLKDDLFLGVKD-NPKPSQEVVKEM 305
Query: 295 VRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQ 354
++++++ +E+ +A+ E++++C EK VF D+N+YML M+ V Y+Q
Sbjct: 306 IQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNIYMLRMLSIVSEVLSYLQ 365
Query: 355 DWEGALQYGQKIIKPYSKHYPLYSLNVASMWLKLGRLYMGLEHKAAGEKALKKAIAIMEV 414
+E A Y ++++ Y K Y + + ++ G + G + KA AI+ V
Sbjct: 366 AFEEASFYARRMVDGYMKLYHPNNAQLGMAVMRAGLTNWHAGNIEVGHGMICKAYAILLV 425
Query: 415 AHGKDHPYISEIK 427
HG HP +++
Sbjct: 426 THGPSHPITKDLE 438
>gi|12232401 SET and MYND domain containing 3 [Homo sapiens]
Length = 369
Score = 191 bits (486), Expect = 8e-49
Identities = 115/367 (31%), Positives = 192/367 (52%), Gaps = 17/367 (4%)
Query: 64 KCGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWNPSETVRLTARILAKQKIHPERT 123
+C +C+ A YC+ +CQK+ WP HK EC + + P ++VRL R++ K + +
Sbjct: 2 RCSQCRVAKYCSAKCQKKAWPDHKRECKCLKSCKPRY-PPDSVRLLGRVVFKL-MDGAPS 59
Query: 124 PSEKLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHLG----FPDNDSLVVLFAQV 179
SEKL + + ES+++KL +KK+ ++ + HF + + P L FA+V
Sbjct: 60 ESEKLYSFYDLESNINKLTEDKKEGLRQLVMTFQHFMREEIQDASQLPPAFDLFEAFAKV 119
Query: 180 NCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIKPGEEVFTS 239
CN FTI + E+ +G ++P ++L+NHSC PN + + G +RAV++I+ GEE+
Sbjct: 120 ICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTIC 179
Query: 240 YIDLLYPTEDRNDRLRDSYFFTCECQECTTKDKDKAKVEIRKLSDPPKAEAIRDMVRYAR 299
Y+D+L +E+R +LRD Y F C+C C T+DKD + E + V+ +
Sbjct: 180 YLDMLMTSEERRKQLRDQYCFECDCFRCQTQDKDADML--------TGDEQVWKEVQESL 231
Query: 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGA 359
IEE + H+K ++L +C+ S D N+Y L ++ AM C+ + E A
Sbjct: 232 KKIEELK--AHWKW-EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEA 288
Query: 360 LQYGQKIIKPYSKHYPLYSLNVASMWLKLGRLYMGLEHKAAGEKALKKAIAIMEVAHGKD 419
L YG + ++PY +P +K+G+L + K L+ A IM V HG++
Sbjct: 289 LFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGRE 348
Query: 420 HPYISEI 426
H I ++
Sbjct: 349 HSLIEDL 355
>gi|154689858 SMYD family member 5 [Homo sapiens]
Length = 418
Score = 70.1 bits (170), Expect = 4e-12
Identities = 87/367 (23%), Positives = 129/367 (35%), Gaps = 121/367 (32%)
Query: 11 RFCSPGKGRGLRALQPFQVGDLLF-------------------SCPAYAYVLTVNERGN- 50
RF S KG+GL A Q + G+ +F +C L E
Sbjct: 26 RFVSSAKGKGLFATQLIRKGETIFVERPLVAAQFLWNALYRYRACDHCLRALEKAEENAQ 85
Query: 51 -----------HCEYCFTRKEGLSKCGRCKQAFYCNVECQ---------------KEDWP 84
H E C RK+ C C Q YC+ EC+ +D P
Sbjct: 86 RLTGKPGQVLPHPELCTVRKDLHQNCPHC-QVMYCSAECRLAATEQYHQVLCPGPSQDDP 144
Query: 85 MHKLECSPMVVFGENWN----PSET--VRLTARILAKQKIHPERTPSEKLLAVKEFESHL 138
+H P+ E W P ET + L AR++A K +K ++ F
Sbjct: 145 LH-----PLNKLQEAWRSIHYPPETASIMLMARMVATVK-----QAKDKDRWIRLFSQFC 194
Query: 139 DKLDNEKKDLI--------QSDIAALHHFYSKHL------GFPDNDSLVVLFAQVNCNGF 184
+K NE+++++ + + L +++ L + D LFA V NG
Sbjct: 195 NKTANEEEEIVHKLLGDKFKGQLELLRRLFTEALYEEAVSQWFTPDGFRSLFALVGTNGQ 254
Query: 185 TIEDEELSHL---------------------------------------GSAIFPDVALM 205
I LS GS +F +
Sbjct: 255 GIGTSSLSQWVHACDTLELKPQDREQLDAFIDQLYKDIEAATGEFLNCEGSGLFVLQSCC 314
Query: 206 NHSCCPNVIVTY--KGTLAEVRAVQEIKPGEEVFTSYIDLLYPTEDRNDR---LRDSYFF 260
NHSC PN ++ L V A+++IKPGEE+ SY+D R+ R LR++Y F
Sbjct: 315 NHSCVPNAETSFPENNFLLHVTALEDIKPGEEICISYLDCCQRERSRHSRHKILRENYLF 374
Query: 261 TCECQEC 267
C C +C
Sbjct: 375 VCSCPKC 381
>gi|156616308 SET and MYND domain containing 4 [Homo sapiens]
Length = 804
Score = 68.9 bits (167), Expect = 8e-12
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 183 GFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIKPGEEVFTSY-- 240
G + D L + IFP ++L+NHSC PN V++ T+A +RA Q I+ G+E+ Y
Sbjct: 516 GSIVTDSRQVRLATGIFPVISLLNHSCSPNTSVSFISTVATIRASQRIRKGQEILHCYGP 575
Query: 241 IDLLYPTEDRNDRLRDSYFFTCECQECTTK 270
+R +LR YFF C C C T+
Sbjct: 576 HKSRMGVAERQQKLRSQYFFDCACPACQTE 605
Score = 37.0 bits (84), Expect = 0.035
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 15 PGKGRGLRALQPFQVGDLLFSCPAYAYVLTVNE-----------------RGN-HCEYCF 56
P KGR L A + G+LL A+ VL E G+ +C C
Sbjct: 241 PLKGRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCL 300
Query: 57 TRKEGLSKCGRCKQAFYCNVECQKEDWPM-HKLEC 90
C C A YC+ EC ++ W + H+ EC
Sbjct: 301 KHTLATVPCDGCSYAKYCSQECLQQAWELYHRTEC 335
>gi|67782303 zinc finger, MYND domain containing 17 [Homo sapiens]
Length = 460
Score = 48.9 bits (115), Expect = 9e-06
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 34 FSCPAYAYVLTVNERGNHCEYCFTRKEGLSK------CGRCKQAFYCNVECQKEDWPMHK 87
F CP + + + C +C GLS C RC+ +YC ECQK DWP H+
Sbjct: 88 FRCPQEMFQ-RMEDTFRFCAHCRALPSGLSDSKVLRHCKRCRNVYYCGPECQKSDWPAHR 146
Query: 88 LECSPM 93
C +
Sbjct: 147 RVCQEL 152
>gi|13489073 egl nine homolog 1 [Homo sapiens]
Length = 426
Score = 48.1 bits (113), Expect = 2e-05
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 51 HCEYCFTRKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
+CE C + E L +C RC+ +FYC E Q++DW HKL C
Sbjct: 20 YCELC-GKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC 58
>gi|38505161 tudor domain containing 1 [Homo sapiens]
Length = 1189
Score = 45.8 bits (107), Expect = 8e-05
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 61 GLSKCGRCKQAFYCNVECQKEDWPMHKLECSPM 93
G +C +CKQ +YC+ CQ+ DW H + C P+
Sbjct: 177 GSLRCSQCKQTYYCSTACQRRDWSAHSIVCRPV 209
>gi|19923997 zinc finger, MYND domain containing 19 [Homo sapiens]
Length = 227
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 10/56 (17%)
Query: 45 VNERGNHCEY-------CFTRKEGLSK---CGRCKQAFYCNVECQKEDWPMHKLEC 90
V E N C Y C ++ L + CGRC+ A YC +CQ++DWP HK C
Sbjct: 157 VEEEENSCTYYECHYPPCTVIEKQLREFNICGRCQVARYCGSQCQQKDWPAHKKHC 212
>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
Length = 1318
Score = 41.6 bits (96), Expect = 0.001
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 60 EGLSKCGRCKQAFYCNVECQKEDWPMHKLECSP 92
E L +C RC + YCN CQK WP HK C P
Sbjct: 803 EKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRP 835
>gi|31543169 suppressor of variegation 4-20 homolog 2 [Homo sapiens]
Length = 462
Score = 40.0 bits (92), Expect = 0.004
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 203 ALMNHSCCPNV-IVTYKGTLAEVRAVQEIKPGEEVFTSYIDLLYPTEDRNDRLRDSYFFT 261
A +NH C PN V G A V+ +++I+PG+EV Y + + ++ +
Sbjct: 179 AFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEH---------- 228
Query: 262 CECQECTTKDKDKAKVEIRKLSDPPK 287
CEC C K + + R+ + PP+
Sbjct: 229 CECHTCERKGEGAFRTRPREPALPPR 254
>gi|28461129 ankyrin repeat and MYND domain containing 2 [Homo
sapiens]
Length = 441
Score = 39.3 bits (90), Expect = 0.007
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 21 LRALQPFQVGDLLFSCPAYAYVLTVNERGN----HCEYCFTRKE-GLSK-CGRCKQAFYC 74
+R++ P ++G S P VLT G E+C T E G SK C CK YC
Sbjct: 286 VRSIAPVEIG----SDPTAFSVLTQAITGQVGFVDVEFCTTCGEKGASKRCSVCKMVIYC 341
Query: 75 NVECQKEDWPMHKLEC 90
+ CQK W HK C
Sbjct: 342 DQTCQKTHWFTHKKIC 357
>gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens]
Length = 440
Score = 37.7 bits (86), Expect = 0.020
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 52 CEYCFTRKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
C YC E +C RC+ +YC ECQ + W H C
Sbjct: 394 CAYCSA--EASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
>gi|50659084 suppressor of variegation 4-20 homolog 1 isoform 2
[Homo sapiens]
Length = 393
Score = 37.7 bits (86), Expect = 0.020
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 31/143 (21%)
Query: 127 KLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHL-GFPDNDSLVVLFAQVNCNGFT 185
K++A KE++ N+K +L+ IA L L +ND V+ + NC
Sbjct: 211 KIVATKEWKR------NDKIELLVGCIAELSEIEENMLLRHGENDFSVMYSTRKNCAQLW 264
Query: 186 IEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGT-LAEVRAVQEIKPGEEVFTSYIDLL 244
LG A F +NH C PN G A V+A+++I+PGEE+ Y D
Sbjct: 265 --------LGPAAF-----INHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGF 311
Query: 245 YPTEDRNDRLRDSYFFTCECQEC 267
+ + CEC C
Sbjct: 312 FGENNE----------FCECYTC 324
>gi|50659082 suppressor of variegation 4-20 homolog 1 isoform 1
[Homo sapiens]
Length = 885
Score = 37.7 bits (86), Expect = 0.020
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 31/143 (21%)
Query: 127 KLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHL-GFPDNDSLVVLFAQVNCNGFT 185
K++A KE++ N+K +L+ IA L L +ND V+ + NC
Sbjct: 211 KIVATKEWKR------NDKIELLVGCIAELSEIEENMLLRHGENDFSVMYSTRKNCAQLW 264
Query: 186 IEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGT-LAEVRAVQEIKPGEEVFTSYIDLL 244
LG A F +NH C PN G A V+A+++I+PGEE+ Y D
Sbjct: 265 --------LGPAAF-----INHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGF 311
Query: 245 YPTEDRNDRLRDSYFFTCECQEC 267
+ + CEC C
Sbjct: 312 FGENNE----------FCECYTC 324
>gi|38016945 deformed epidermal autoregulatory factor 1 [Homo
sapiens]
Length = 565
Score = 35.8 bits (81), Expect = 0.078
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 59 KEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
+E +S+C C + YC+ CQ++DW H+ C
Sbjct: 509 REAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 540
>gi|239749940 PREDICTED: similar to deformed epidermal
autoregulatory factor 1 [Homo sapiens]
Length = 426
Score = 35.8 bits (81), Expect = 0.078
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 59 KEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
+E +S+C C + YC+ CQ++DW H+ C
Sbjct: 370 REAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 401
>gi|89353295 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1a [Homo sapiens]
Length = 575
Score = 35.0 bits (79), Expect = 0.13
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 43 LTVNERGNHCEYCFT-RKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
L +NE+ E C+ ++ C C A YC CQ +DW H C
Sbjct: 466 LVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLC 514
>gi|74229008 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1c [Homo sapiens]
Length = 595
Score = 35.0 bits (79), Expect = 0.13
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 43 LTVNERGNHCEYCFT-RKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
L +NE+ E C+ ++ C C A YC CQ +DW H C
Sbjct: 486 LVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLC 534
>gi|4826663 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1b [Homo sapiens]
Length = 604
Score = 35.0 bits (79), Expect = 0.13
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 43 LTVNERGNHCEYCFT-RKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
L +NE+ E C+ ++ C C A YC CQ +DW H C
Sbjct: 495 LVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLC 543
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 34.7 bits (78), Expect = 0.17
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 52 CEYCFTRKEGLSKCGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWNPSETVRLTAR 111
C C +KE + C C YC+ CQ+ WP H C+ + +E T
Sbjct: 977 CANC--KKEAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLN 1032
Query: 112 ILAK-QKIHPERTPSEKLLAVKEFESHLDK 140
++ + PSE A KE E+ +K
Sbjct: 1033 KSSQGSSSSTQSAPSETASASKEKETSAEK 1062
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 34.7 bits (78), Expect = 0.17
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 52 CEYCFTRKEGLSKCGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWNPSETVRLTAR 111
C C +KE + C C YC+ CQ+ WP H C+ + +E T
Sbjct: 1002 CANC--KKEAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLN 1057
Query: 112 ILAK-QKIHPERTPSEKLLAVKEFESHLDK 140
++ + PSE A KE E+ +K
Sbjct: 1058 KSSQGSSSSTQSAPSETASASKEKETSAEK 1087
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 34.7 bits (78), Expect = 0.17
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 52 CEYCFTRKEGLSKCGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWNPSETVRLTAR 111
C C +KE + C C YC+ CQ+ WP H C+ + +E T
Sbjct: 1002 CANC--KKEAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLN 1057
Query: 112 ILAK-QKIHPERTPSEKLLAVKEFESHLDK 140
++ + PSE A KE E+ +K
Sbjct: 1058 KSSQGSSSSTQSAPSETASASKEKETSAEK 1087
>gi|21735594 programmed cell death 2 isoform 2 [Homo sapiens]
Length = 228
Score = 33.5 bits (75), Expect = 0.39
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 61 GLSKCGRCKQAFYCNVECQKEDWPM-HKLECS 91
G C RC +A+YC+ E Q DW + HK C+
Sbjct: 142 GPKTCSRCHKAYYCSKEHQTLDWRLGHKQACA 173
>gi|21735592 programmed cell death 2 isoform 1 [Homo sapiens]
Length = 344
Score = 33.5 bits (75), Expect = 0.39
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 61 GLSKCGRCKQAFYCNVECQKEDWPM-HKLECS 91
G C RC +A+YC+ E Q DW + HK C+
Sbjct: 142 GPKTCSRCHKAYYCSKEHQTLDWRLGHKQACA 173
>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 33.1 bits (74), Expect = 0.50
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 45 VNERGNHCEYCFT-RKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
+N++ + E C+ ++ C C A YC CQ +DW H C
Sbjct: 468 INQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHIC 514
>gi|28329419 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 33.1 bits (74), Expect = 0.50
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 45 VNERGNHCEYCFT-RKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
+N++ + E C+ ++ C C A YC CQ +DW H C
Sbjct: 468 INQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHIC 514
>gi|28329416 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8b [Homo sapiens]
Length = 604
Score = 33.1 bits (74), Expect = 0.50
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 45 VNERGNHCEYCFT-RKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
+N++ + E C+ ++ C C A YC CQ +DW H C
Sbjct: 505 INQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHIC 551
>gi|4757916 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8a [Homo sapiens]
Length = 577
Score = 33.1 bits (74), Expect = 0.50
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 45 VNERGNHCEYCFT-RKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
+N++ + E C+ ++ C C A YC CQ +DW H C
Sbjct: 478 INQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHIC 524
>gi|28872803 myeloid translocation gene on chromosome 16 isoform
MTG16a [Homo sapiens]
Length = 653
Score = 33.1 bits (74), Expect = 0.50
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 45 VNERGNHCEYCFT-RKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
+N++ + E C+ ++ C C A YC CQ DW H C
Sbjct: 546 INQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVC 592
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,926,581
Number of Sequences: 37866
Number of extensions: 757721
Number of successful extensions: 2261
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2202
Number of HSP's gapped (non-prelim): 68
length of query: 433
length of database: 18,247,518
effective HSP length: 105
effective length of query: 328
effective length of database: 14,271,588
effective search space: 4681080864
effective search space used: 4681080864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.