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Search of human proteins with 187761375
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187761375 maestro isoform a [Homo sapiens]
(248 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187761375 maestro isoform a [Homo sapiens] 495 e-140
gi|187761381 maestro isoform d [Homo sapiens] 432 e-121
gi|187761377 maestro isoform b [Homo sapiens] 289 1e-78
gi|187761379 maestro isoform c [Homo sapiens] 226 1e-59
gi|154240671 HEAT repeat family member 7B2 [Homo sapiens] 149 2e-36
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 100 2e-21
gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 100 2e-21
gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 100 2e-21
gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5... 75 7e-14
gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens] 75 7e-14
gi|148727311 hypothetical protein LOC389690 [Homo sapiens] 74 9e-14
gi|194595501 hypothetical protein LOC140699 isoform 1 [Homo sapi... 34 0.14
gi|4826730 FK506 binding protein 12-rapamycin associated protein... 32 0.39
gi|209969838 transportin 2 (importin 3, karyopherin beta 2b) iso... 31 1.1
gi|209969836 transportin 2 (importin 3, karyopherin beta 2b) iso... 31 1.1
gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isof... 31 1.1
gi|13376768 elongation factor RNA polymerase II-like 3 [Homo sap... 30 2.5
gi|23510381 transportin 1 isoform 2 [Homo sapiens] 29 3.3
gi|133925811 transportin 1 isoform 1 [Homo sapiens] 29 3.3
gi|48762926 PWP2 periodic tryptophan protein homolog [Homo sapiens] 29 4.3
gi|144226251 chitinase 3-like 1 [Homo sapiens] 28 5.7
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 28 5.7
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 28 5.7
gi|154277120 spectrin repeat containing, nuclear envelope 1 isof... 28 9.7
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 28 9.7
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 28 9.7
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 28 9.7
gi|154937380 hypothetical protein LOC642475 [Homo sapiens] 28 9.7
>gi|187761375 maestro isoform a [Homo sapiens]
Length = 248
Score = 495 bits (1275), Expect = e-140
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP 60
MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP
Sbjct: 1 MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP 60
Query: 61 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK 120
SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK
Sbjct: 61 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK 120
Query: 121 IQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRD 180
IQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRD
Sbjct: 121 IQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRD 180
Query: 181 SLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQ 240
SLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQ
Sbjct: 181 SLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQ 240
Query: 241 FFYANKIL 248
FFYANKIL
Sbjct: 241 FFYANKIL 248
>gi|187761381 maestro isoform d [Homo sapiens]
Length = 262
Score = 432 bits (1111), Expect = e-121
Identities = 215/216 (99%), Positives = 216/216 (100%)
Query: 33 KVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 92
+VSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD
Sbjct: 47 QVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 106
Query: 93 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSA 152
LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSA
Sbjct: 107 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSA 166
Query: 153 FVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKE 212
FVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKE
Sbjct: 167 FVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKE 226
Query: 213 EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 248
EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL
Sbjct: 227 EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 262
>gi|187761377 maestro isoform b [Homo sapiens]
Length = 196
Score = 289 bits (740), Expect = 1e-78
Identities = 166/248 (66%), Positives = 172/248 (69%), Gaps = 52/248 (20%)
Query: 1 MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP 60
MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP
Sbjct: 1 MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP 60
Query: 61 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK 120
SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK
Sbjct: 61 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK 120
Query: 121 IQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRD 180
IQGKGLGSFFIDITLQTRTLLDD + F + + K + F S+ Q
Sbjct: 121 IQGKGLGSFFIDITLQTRTLLDD-------ACKTTFQACSPYLKLKEEYSFQSEEDQRNT 173
Query: 181 SLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQ 240
L +Q S Y HPEILQ
Sbjct: 174 KL------------------YQQLSHY---------------------------HPEILQ 188
Query: 241 FFYANKIL 248
FFYANKIL
Sbjct: 189 FFYANKIL 196
>gi|187761379 maestro isoform c [Homo sapiens]
Length = 210
Score = 226 bits (576), Expect = 1e-59
Identities = 133/216 (61%), Positives = 140/216 (64%), Gaps = 52/216 (24%)
Query: 33 KVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 92
+VSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD
Sbjct: 47 QVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 106
Query: 93 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSA 152
LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD +
Sbjct: 107 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD-------AC 159
Query: 153 FVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKE 212
F + + K + F S+ Q L +Q S Y
Sbjct: 160 KTTFQACSPYLKLKEEYSFQSEEDQRNTKL------------------YQQLSHY----- 196
Query: 213 EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 248
HPEILQFFYANKIL
Sbjct: 197 ----------------------HPEILQFFYANKIL 210
>gi|154240671 HEAT repeat family member 7B2 [Homo sapiens]
Length = 1585
Score = 149 bits (377), Expect = 2e-36
Identities = 79/207 (38%), Positives = 122/207 (58%)
Query: 8 ILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDPSAKKRHM 67
I+ Q LS TS + R + +FFS++ + K L+NV ++ + A D +A R M
Sbjct: 1263 IMEQLLSSLTSSSENYRITGAAFFSELMKEPILWKHGNLRNVLILMDQSAWDSNATLRQM 1322
Query: 68 AMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLG 127
A+R LG A AP KV+K+K+++L+ ++ GLY EV+ ES+K L +L + + +
Sbjct: 1323 AIRGLGNTASGAPHKVKKHKQLMLESIIRGLYHLARTEVVCESLKALKKILELLTDRDVS 1382
Query: 128 SFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQ 187
+F +I LQTRT +DE D +R +A LF LA GR+WK FF ++K++ S L+HL
Sbjct: 1383 FYFKEIVLQTRTFFEDEQDDVRLTAIFLFEDLAPLTGRRWKIFFAEEIKKSLISFLLHLW 1442
Query: 188 DRNPQVAKACKTTFQACSPYLKLKEEY 214
D NP++ AC+ C P+L L+E Y
Sbjct: 1443 DPNPKIGVACRDVLMVCIPFLGLQELY 1469
>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1723
Score = 100 bits (248), Expect = 2e-21
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 43 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 100
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1420 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1479
Query: 101 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLA 160
PV+ V E M+ LT +L +++ +GS F ++ Q R D+E++ LR AF+LFG+LA
Sbjct: 1480 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDNESELLRLKAFILFGKLA 1539
Query: 161 AFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQAC 204
G K FF +VK+ L++H QD A+AC T C
Sbjct: 1540 RVVGMSKKHFFKGEVKKAWIPLMLHSQDPCSNAAQACMATMFQC 1583
>gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1706
Score = 100 bits (248), Expect = 2e-21
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 43 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 100
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1412 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1471
Query: 101 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLA 160
PV+ V E M+ LT +L +++ +GS F ++ Q R D+E++ LR AF+LFG+LA
Sbjct: 1472 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDNESELLRLKAFILFGKLA 1531
Query: 161 AFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQAC 204
G K FF +VK+ L++H QD A+AC T C
Sbjct: 1532 RVVGMSKKHFFKGEVKKAWIPLMLHSQDPCSNAAQACMATMFQC 1575
>gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1710
Score = 100 bits (248), Expect = 2e-21
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 43 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 100
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1416 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1475
Query: 101 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLA 160
PV+ V E M+ LT +L +++ +GS F ++ Q R D+E++ LR AF+LFG+LA
Sbjct: 1476 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDNESELLRLKAFILFGKLA 1535
Query: 161 AFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQAC 204
G K FF +VK+ L++H QD A+AC T C
Sbjct: 1536 RVVGMSKKHFFKGEVKKAWIPLMLHSQDPCSNAAQACMATMFQC 1579
>gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5
[Homo sapiens]
Length = 1218
Score = 74.7 bits (182), Expect = 7e-14
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 11/198 (5%)
Query: 53 LAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLE--VIHES 110
LA R +D A R + +R L +A PDKVR + +L ++ GL D N V E+
Sbjct: 945 LAARQKDTCASVRRLVLRGLANLASGCPDKVRTHGPQLLTAMIGGLDDGDNPHSPVALEA 1004
Query: 111 MKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKF 170
M L ++ ++ L S + + ++ R D E R ++ LFG L +
Sbjct: 1005 MLGLARLVHLVESWDLRSGLLHVAIRIRPFFDSEKMEFRTASIRLFGHLNKVCHGDCEDV 1064
Query: 171 FTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLY-- 228
F QV LL+HLQD VA AC+ + C P L +E + + Q L+
Sbjct: 1065 FLDQVVGGLAPLLLHLQDPQATVASACRFALRMCGPNLACEELSAAFQKHLQEGRALHFG 1124
Query: 229 -------QQLSHYHPEIL 239
+ L H+ P++L
Sbjct: 1125 EFLNTTCKHLMHHFPDLL 1142
>gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens]
Length = 1641
Score = 74.7 bits (182), Expect = 7e-14
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 11/198 (5%)
Query: 53 LAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLE--VIHES 110
LA R +D A R + +R L +A PDKVR + +L ++ GL D N V E+
Sbjct: 1368 LAARQKDTCASVRRLVLRGLANLASGCPDKVRTHGPQLLTAMIGGLDDGDNPHSPVALEA 1427
Query: 111 MKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKF 170
M L ++ ++ L S + + ++ R D E R ++ LFG L +
Sbjct: 1428 MLGLARLVHLVESWDLRSGLLHVAIRIRPFFDSEKMEFRTASIRLFGHLNKVCHGDCEDV 1487
Query: 171 FTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLY-- 228
F QV LL+HLQD VA AC+ + C P L +E + + Q L+
Sbjct: 1488 FLDQVVGGLAPLLLHLQDPQATVASACRFALRMCGPNLACEELSAAFQKHLQEGRALHFG 1547
Query: 229 -------QQLSHYHPEIL 239
+ L H+ P++L
Sbjct: 1548 EFLNTTCKHLMHHFPDLL 1565
>gi|148727311 hypothetical protein LOC389690 [Homo sapiens]
Length = 1318
Score = 74.3 bits (181), Expect = 9e-14
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
Query: 8 ILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDPSAKKRHM 67
+L Q L S +++R I +K + + P + +LA+ DPS + R +
Sbjct: 1001 VLRQLLPSLQSPQERERKVAILILTKFLYSPVLLEVLPKQAALTVLAQGLHDPSPEVRVL 1060
Query: 68 AMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLG 127
+++ L + + PDK + + LL G + + +VI M T++ L ++ +G G
Sbjct: 1061 SLQGLSNILFH-PDKGSLLQGQLRPLLD-GFFQSSD-QVIVCIMGTVSDTLHRLGAQGTG 1117
Query: 128 SFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQ 187
S + + + TR+ +DE D +R +A LFG L A + +QV Q+ LL+HL+
Sbjct: 1118 SQSLGVAISTRSFFNDERDGIRAAAMALFGDLVAAMADRELSGLRTQVHQSMVPLLLHLK 1177
Query: 188 DRNPQVAKACKTTFQACSPYLK 209
D+ P VA K TF C+ L+
Sbjct: 1178 DQCPAVATQAKFTFYRCAVLLR 1199
>gi|194595501 hypothetical protein LOC140699 isoform 1 [Homo
sapiens]
Length = 1052
Score = 33.9 bits (76), Expect = 0.14
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 130 FIDITLQTRTLL----DDENDSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIH 185
F + RTL D +D R+S LFG KK +QV + LL++
Sbjct: 839 FTTLAAMMRTLFSLFGDVRSDVHRFSV-TLFGAAIKSVKNPDKKSIENQVLDSLVPLLLY 897
Query: 186 LQDRNPQVAKACKTTFQACSPYLKLK 211
QD N VA+ + C+ +LK K
Sbjct: 898 SQDENDAVAEESRQVLTICAQFLKWK 923
>gi|4826730 FK506 binding protein 12-rapamycin associated protein 1
[Homo sapiens]
Length = 2549
Score = 32.3 bits (72), Expect = 0.39
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 13/126 (10%)
Query: 47 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDP---VN 103
K + IL E + + + R LG + AP +R Y + +L L+ L DP N
Sbjct: 732 KMLIQILTELEHSGIGRIKEQSARMLGHLVSNAPRLIRPYMEPILKALILKLKDPDPDPN 791
Query: 104 LEVIHESMKT---LTVVLGKIQGKGLGSFFIDI--TLQTRTLLDDENDSLRYSAFVLFGQ 158
VI+ + T L V G K + FI I LQ +LL + R A GQ
Sbjct: 792 PGVINNVLATIGELAQVSGLEMRKWVDELFIIIMDMLQDSSLL-----AKRQVALWTLGQ 846
Query: 159 LAAFAG 164
L A G
Sbjct: 847 LVASTG 852
>gi|209969838 transportin 2 (importin 3, karyopherin beta 2b)
isoform 1 [Homo sapiens]
Length = 897
Score = 30.8 bits (68), Expect = 1.1
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 46 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 103
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 104 LEVIHESMKTLTVVLG 119
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|209969836 transportin 2 (importin 3, karyopherin beta 2b)
isoform 3 [Homo sapiens]
Length = 887
Score = 30.8 bits (68), Expect = 1.1
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 46 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 103
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 104 LEVIHESMKTLTVVLG 119
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isoform
2 [Homo sapiens]
Length = 887
Score = 30.8 bits (68), Expect = 1.1
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 46 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 103
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 104 LEVIHESMKTLTVVLG 119
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|13376768 elongation factor RNA polymerase II-like 3 [Homo
sapiens]
Length = 397
Score = 29.6 bits (65), Expect = 2.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 207 YLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANK 246
Y K +++Y EE +R L+Q+LSH IL+F N+
Sbjct: 356 YKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKNR 395
>gi|23510381 transportin 1 isoform 2 [Homo sapiens]
Length = 890
Score = 29.3 bits (64), Expect = 3.3
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 46 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL--YDPVN 103
LK + L +R D + + + A T+ EA ++ Y +LD LV+ Y N
Sbjct: 478 LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKN 537
Query: 104 LEVIHESMKTLTVVLG 119
L ++++++ TL +G
Sbjct: 538 LLILYDAIGTLADSVG 553
>gi|133925811 transportin 1 isoform 1 [Homo sapiens]
Length = 898
Score = 29.3 bits (64), Expect = 3.3
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 46 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL--YDPVN 103
LK + L +R D + + + A T+ EA ++ Y +LD LV+ Y N
Sbjct: 486 LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKN 545
Query: 104 LEVIHESMKTLTVVLG 119
L ++++++ TL +G
Sbjct: 546 LLILYDAIGTLADSVG 561
>gi|48762926 PWP2 periodic tryptophan protein homolog [Homo sapiens]
Length = 919
Score = 28.9 bits (63), Expect = 4.3
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 60 PSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 100
P +K + N+ M Y AP K R++ VLD +G YD
Sbjct: 106 PDGRKFVVTKGNIAQM-YHAPGKKREFNAFVLDKTYFGPYD 145
>gi|144226251 chitinase 3-like 1 [Homo sapiens]
Length = 383
Score = 28.5 bits (62), Expect = 5.7
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Query: 92 DLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYS 151
D+ +YG+ + L+ + ++KTL V G G S T RT + LR
Sbjct: 73 DVTLYGMLN--TLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFLRTH 130
Query: 152 AFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQV-----AKACKTTFQACSP 206
F + GR+ K+ FT+ +K+ + + Q Q+ A K T +
Sbjct: 131 GFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQLLLSAALSAGKVTIDSSYD 190
Query: 207 YLKLKEEYSFQS 218
K+ + F S
Sbjct: 191 IAKISQHLDFIS 202
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 28.5 bits (62), Expect = 5.7
Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 62 AKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLE---------------V 106
A K HMA+ + + A +R KK+ +DL D +NLE V
Sbjct: 367 AWKHHMAIEAVHSNA------IRDKKKLQMDLEEQHNKDKLNLEEDKNQLQQELENLKEV 420
Query: 107 IHESMKTLTVVLGKIQG------KGLGSF------FIDITLQTRTLLDDENDSLRYSAFV 154
+ + + T +G +Q +GLGS D + + LD DSL+ +
Sbjct: 421 LEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNELDLTKDSLKETKDA 480
Query: 155 LFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEY 214
L + + T + + L + + ++ K + Q CS KL+EE
Sbjct: 481 LLNVEGELEQERQQHEETIAAMKEEEKLKVDKMAHDLEI-KWTENLRQECS---KLREEL 536
Query: 215 SFQSEEDQRN 224
Q EED+++
Sbjct: 537 RLQHEEDKKS 546
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 28.5 bits (62), Expect = 5.7
Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 62 AKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLE---------------V 106
A K HMA+ + + A +R KK+ +DL D +NLE V
Sbjct: 487 AWKHHMAIEAVHSNA------IRDKKKLQMDLEEQHNKDKLNLEEDKNQLQQELENLKEV 540
Query: 107 IHESMKTLTVVLGKIQG------KGLGSF------FIDITLQTRTLLDDENDSLRYSAFV 154
+ + + T +G +Q +GLGS D + + LD DSL+ +
Sbjct: 541 LEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNELDLTKDSLKETKDA 600
Query: 155 LFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEY 214
L + + T + + L + + ++ K + Q CS KL+EE
Sbjct: 601 LLNVEGELEQERQQHEETIAAMKEEEKLKVDKMAHDLEI-KWTENLRQECS---KLREEL 656
Query: 215 SFQSEEDQRN 224
Q EED+++
Sbjct: 657 RLQHEEDKKS 666
>gi|154277120 spectrin repeat containing, nuclear envelope 1 isoform
3 [Homo sapiens]
Length = 982
Score = 27.7 bits (60), Expect = 9.7
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 146 DSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACS 205
D+L+ + +L F G++ + + RDS+L+ L + + Q+ F C
Sbjct: 252 DNLQKRVTSILRRLKHFIGQR------EEFETARDSILVWLTEMDLQLTNI--EHFSECD 303
Query: 206 PYLKLKEEYSFQSEEDQRNTKLYQ 229
K+K+ +FQ E + K+ Q
Sbjct: 304 VQAKIKQLKAFQQEISLNHNKIEQ 327
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
[Homo sapiens]
Length = 3321
Score = 27.7 bits (60), Expect = 9.7
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 146 DSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACS 205
D+L+ + +L F G++ + + RDS+L+ L + + Q+ F C
Sbjct: 2614 DNLQKRVTSILRRLKHFIGQR------EEFETARDSILVWLTEMDLQLTNI--EHFSECD 2665
Query: 206 PYLKLKEEYSFQSEEDQRNTKLYQ 229
K+K+ +FQ E + K+ Q
Sbjct: 2666 VQAKIKQLKAFQQEISLNHNKIEQ 2689
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 27.7 bits (60), Expect = 9.7
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 146 DSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACS 205
D+L+ + +L F G++ + + RDS+L+ L + + Q+ F C
Sbjct: 8019 DNLQKRVTSILRRLKHFIGQR------EEFETARDSILVWLTEMDLQLTNI--EHFSECD 8070
Query: 206 PYLKLKEEYSFQSEEDQRNTKLYQ 229
K+K+ +FQ E + K+ Q
Sbjct: 8071 VQAKIKQLKAFQQEISLNHNKIEQ 8094
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 27.7 bits (60), Expect = 9.7
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 146 DSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACS 205
D+L+ + +L F G++ + + RDS+L+ L + + Q+ F C
Sbjct: 8090 DNLQKRVTSILRRLKHFIGQR------EEFETARDSILVWLTEMDLQLTNI--EHFSECD 8141
Query: 206 PYLKLKEEYSFQSEEDQRNTKLYQ 229
K+K+ +FQ E + K+ Q
Sbjct: 8142 VQAKIKQLKAFQQEISLNHNKIEQ 8165
>gi|154937380 hypothetical protein LOC642475 [Homo sapiens]
Length = 719
Score = 27.7 bits (60), Expect = 9.7
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 140 LLDDENDSLRYSAFVLFGQLAAFAGRKWKKF-----FTSQVKQTRDSLLIHLQDRNPQVA 194
LLDD DS+R SA L G L GR + V Q+ LL+ L D + A
Sbjct: 489 LLDDTRDSIRASAVGLLGTLVR-RGRGGLRLGLRGPLRKLVLQSLVPLLLRLHDPSRDAA 547
Query: 195 KACKTTFQAC 204
++ + T C
Sbjct: 548 ESSEWTLARC 557
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,622,790
Number of Sequences: 37866
Number of extensions: 338758
Number of successful extensions: 948
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 926
Number of HSP's gapped (non-prelim): 34
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.