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Search of human proteins with 187608726
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187608726 zinc finger protein 9 isoform 1 [Homo sapiens]
(179 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187608726 zinc finger protein 9 isoform 1 [Homo sapiens] 404 e-113
gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens] 398 e-111
gi|4827071 zinc finger protein 9 isoform 3 [Homo sapiens] 396 e-111
gi|187608738 zinc finger protein 9 isoform 4 [Homo sapiens] 383 e-107
gi|187608744 zinc finger protein 9 isoform 5 [Homo sapiens] 377 e-105
gi|187608750 zinc finger protein 9 isoform 6 [Homo sapiens] 374 e-104
gi|42558260 zinc finger, CCHC domain containing 13 [Homo sapiens] 213 7e-56
gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens] 68 4e-12
gi|196259805 zinc finger, CCHC domain containing 9 [Homo sapiens] 55 4e-08
gi|196259803 zinc finger, CCHC domain containing 9 [Homo sapiens] 55 4e-08
gi|14150027 zinc finger, CCHC domain containing 9 [Homo sapiens] 55 4e-08
gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens] 54 5e-08
gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Ho... 45 3e-05
gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens] 45 4e-05
gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens] 45 4e-05
gi|190610025 zinc finger protein 93 homolog [Homo sapiens] 43 1e-04
gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens] 42 3e-04
gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens] 42 3e-04
gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens] 42 3e-04
gi|189571667 zinc finger protein 696 [Homo sapiens] 42 3e-04
gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Ho... 42 3e-04
gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Ho... 42 4e-04
gi|224177533 zinc finger protein LOC400713 [Homo sapiens] 40 8e-04
gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens] 39 0.002
gi|169170082 PREDICTED: hypothetical protein LOC728927 [Homo sap... 39 0.002
gi|169170430 PREDICTED: similar to hCG40110 [Homo sapiens] 39 0.002
gi|169213834 PREDICTED: similar to hCG36734 [Homo sapiens] 39 0.003
gi|169214277 PREDICTED: similar to hCG36734 [Homo sapiens] 39 0.003
gi|169213622 PREDICTED: similar to hCG36734 [Homo sapiens] 39 0.003
gi|169171772 PREDICTED: similar to hCG40110 [Homo sapiens] 38 0.004
>gi|187608726 zinc finger protein 9 isoform 1 [Homo sapiens]
Length = 179
Score = 404 bits (1039), Expect = e-113
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
Query: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
>gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens]
Length = 178
Score = 398 bits (1023), Expect = e-111
Identities = 178/179 (99%), Positives = 178/179 (99%), Gaps = 1/179 (0%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
GHLAKDCDLQED EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 61 GHLAKDCDLQED-EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 119
Query: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 120 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 178
>gi|4827071 zinc finger protein 9 isoform 3 [Homo sapiens]
Length = 177
Score = 396 bits (1017), Expect = e-111
Identities = 177/179 (98%), Positives = 177/179 (98%), Gaps = 2/179 (1%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
GHLAKDCDLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 61 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 118
Query: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177
>gi|187608738 zinc finger protein 9 isoform 4 [Homo sapiens]
Length = 172
Score = 383 bits (983), Expect = e-107
Identities = 172/179 (96%), Positives = 172/179 (96%), Gaps = 7/179 (3%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
Query: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 54 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 113
Query: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 114 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 172
>gi|187608744 zinc finger protein 9 isoform 5 [Homo sapiens]
Length = 171
Score = 377 bits (967), Expect = e-105
Identities = 171/179 (95%), Positives = 171/179 (95%), Gaps = 8/179 (4%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
Query: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
GHLAKDCDLQED EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 54 GHLAKDCDLQED-EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 112
Query: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 113 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 171
>gi|187608750 zinc finger protein 9 isoform 6 [Homo sapiens]
Length = 170
Score = 374 bits (961), Expect = e-104
Identities = 170/179 (94%), Positives = 170/179 (94%), Gaps = 9/179 (5%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
Query: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
GHLAKDCDLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 54 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 111
Query: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 112 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 170
>gi|42558260 zinc finger, CCHC domain containing 13 [Homo sapiens]
Length = 166
Score = 213 bits (542), Expect = 7e-56
Identities = 101/154 (65%), Positives = 111/154 (72%), Gaps = 9/154 (5%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSS + F CG SGHWAR CP GG GR R G G RG Q S++L CY CGES
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGGAGGR--RGGGHG-----RGSQCGSTTLSYTCYCCGES 53
Query: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
G AK+C L ++ CYNCGR GHIAKDCK+PKRER Q CY CG+ GHLARDCD EQK
Sbjct: 54 GRNAKNCVLLGNI--CYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDRQKEQK 111
Query: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSK 154
CYSCG+ GHIQKDC +VKCYRCGE GHVAINCSK
Sbjct: 112 CYSCGKLGHIQKDCAQVKCYRCGEIGHVAINCSK 145
Score = 35.0 bits (79), Expect = 0.034
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 122 YSCGEFGHIQKDCTKVKC--YRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 175
++CG GH + C + R G G + S T CY CGESG A+ C +
Sbjct: 7 FACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNCVL 62
>gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens]
Length = 543
Score = 68.2 bits (165), Expect = 4e-12
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 44 QFVSSSLPDICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNC 103
++ S++ IC C + GHL+K+C L V C+ C R GH+ C P C C
Sbjct: 233 RYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAP------LCEYC 286
Query: 104 GKPGHLARDC--DHADEQKCYSCGEFGHIQKDCTKV-----KCYRCGETGHVAINCSKTS 156
P L C H+ +++C C GH CT++ + G ++
Sbjct: 287 PVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSA 346
Query: 157 EVNCYRCGESGHLAREC 173
CY C + GH EC
Sbjct: 347 LAYCYHCAQKGHYGHEC 363
Score = 26.9 bits (58), Expect = 9.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 6 CFKCGRSGHWARECP 20
C+ C + GH+ ECP
Sbjct: 350 CYHCAQKGHYGHECP 364
>gi|196259805 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 90 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 137
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 138 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 173
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 53.9 bits (128), Expect = 7e-08
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 53 ICYRCGESGHLAKDCDLQEDVE-----ACYNCGRGGHIAKDCK---EPKREREQC--CYN 102
+C+ C + GH DC + + CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 103 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 134
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 41.6 bits (96), Expect = 4e-04
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 24/96 (25%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
M + C++CG + H +C G F F C+ CGE
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALG-------------EFPFAK------CFVCGEM 192
Query: 61 GHLAKDC-----DLQEDVEACYNCGRGGHIAKDCKE 91
GHL++ C L D C CG H+ KDC E
Sbjct: 193 GHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 38.9 bits (89), Expect = 0.002
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 21/77 (27%)
Query: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLA 64
+CF CG GH +R CP +G+ + G G C CG HL
Sbjct: 185 KCFVCGEMGHLSRSCP---DNPKGLYADGGG------------------CKLCGSVEHLK 223
Query: 65 KDCDLQEDVEACYNCGR 81
KDC ++ E GR
Sbjct: 224 KDCPESQNSERMVTVGR 240
>gi|196259803 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 90 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 137
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 138 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 173
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 53.9 bits (128), Expect = 7e-08
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 53 ICYRCGESGHLAKDCDLQEDVE-----ACYNCGRGGHIAKDCK---EPKREREQC--CYN 102
+C+ C + GH DC + + CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 103 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 134
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 41.6 bits (96), Expect = 4e-04
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 24/96 (25%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
M + C++CG + H +C G F F C+ CGE
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALG-------------EFPFAK------CFVCGEM 192
Query: 61 GHLAKDC-----DLQEDVEACYNCGRGGHIAKDCKE 91
GHL++ C L D C CG H+ KDC E
Sbjct: 193 GHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 38.9 bits (89), Expect = 0.002
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 21/77 (27%)
Query: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLA 64
+CF CG GH +R CP +G+ + G G C CG HL
Sbjct: 185 KCFVCGEMGHLSRSCP---DNPKGLYADGGG------------------CKLCGSVEHLK 223
Query: 65 KDCDLQEDVEACYNCGR 81
KDC ++ E GR
Sbjct: 224 KDCPESQNSERMVTVGR 240
>gi|14150027 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 90 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 137
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 138 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 173
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 53.9 bits (128), Expect = 7e-08
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 53 ICYRCGESGHLAKDCDLQEDVE-----ACYNCGRGGHIAKDCK---EPKREREQC--CYN 102
+C+ C + GH DC + + CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 103 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 134
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 41.6 bits (96), Expect = 4e-04
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 24/96 (25%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
M + C++CG + H +C G F F C+ CGE
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALG-------------EFPFAK------CFVCGEM 192
Query: 61 GHLAKDC-----DLQEDVEACYNCGRGGHIAKDCKE 91
GHL++ C L D C CG H+ KDC E
Sbjct: 193 GHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 38.9 bits (89), Expect = 0.002
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 21/77 (27%)
Query: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLA 64
+CF CG GH +R CP +G+ + G G C CG HL
Sbjct: 185 KCFVCGEMGHLSRSCP---DNPKGLYADGGG------------------CKLCGSVEHLK 223
Query: 65 KDCDLQEDVEACYNCGR 81
KDC ++ E GR
Sbjct: 224 KDCPESQNSERMVTVGR 240
>gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens]
Length = 403
Score = 54.3 bits (129), Expect = 5e-08
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
C+ CG H+ CT+ +C+RCGE GH++ C K + C CG+ GH +C
Sbjct: 335 CFKCGSRTHMSGSCTQDRCFRCGEEGHLSPYCRK--GIVCNLCGKRGHAFAQC 385
Score = 51.2 bits (121), Expect = 5e-07
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 100 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK-VKCYRCGETGHVAINCSKT--S 156
C+ CG H++ C + +C+ CGE GH+ C K + C CG+ GH C K +
Sbjct: 335 CFKCGSRTHMSGSCT---QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHN 391
Query: 157 EVNCYRCGESGH 168
V G +GH
Sbjct: 392 SVAAQLTGVAGH 403
Score = 47.8 bits (112), Expect = 5e-06
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Query: 11 RSGHWARE--CPTGGGRGRGMRSRGRGGFT--SDRGFQFVSSSLPDICYRCGESGHLAKD 66
R G W E C +G G G F ++RG+ + P C++CG H++
Sbjct: 289 RFGIWTGEYKCEIELRQGEGGVRHLPGAFFLGAERGYSWYKGQ-PKTCFKCGSRTHMSGS 347
Query: 67 CDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 116
C + C+ CG GH++ C+ + C CGK GH C A
Sbjct: 348 CTQ----DRCFRCGEEGHLSPYCR-----KGIVCNLCGKRGHAFAQCPKA 388
Score = 38.5 bits (88), Expect = 0.003
Identities = 25/84 (29%), Positives = 29/84 (34%), Gaps = 33/84 (39%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
CFKCG H + C T DR C+RCGE GHL+
Sbjct: 335 CFKCGSRTHMSGSC------------------TQDR------------CFRCGEEGHLSP 364
Query: 66 DCDLQEDVEACYNCGRGGHIAKDC 89
C C CG+ GH C
Sbjct: 365 YC---RKGIVCNLCGKRGHAFAQC 385
>gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Homo
sapiens]
Length = 1640
Score = 45.4 bits (106), Expect = 3e-05
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 66 DCDLQEDVEACYNCGRGGHIAKDCKEPKR-------------EREQCCYNCGKPG--HLA 110
D +L + C CG+ GH KDC + KR E E+ + P H
Sbjct: 1285 DGELAPNDRCCRVCGKIGHYMKDCPKRKRLKKKDSEEEKEGNEEEKDSRDVLDPRDLHDT 1344
Query: 111 RDCDHADEQKCYSCGEFGHIQKDCTKVKCYR 141
RD + +C+ CG+ GH++++C +VK R
Sbjct: 1345 RDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1375
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 97 EQCCYNCGKPGHLARDCDH--------ADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHV 148
++CC CGK GH +DC ++E+K E +KD V R H
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKRLKKKDSEEEK-----EGNEEEKDSRDVLDPR---DLHD 1343
Query: 149 AINCSKTSEVNCYRCGESGHLAREC 173
+ ++ C+ CG++GH+ REC
Sbjct: 1344 TRDFRDPRDLRCFICGDAGHVRREC 1368
Score = 34.3 bits (77), Expect = 0.059
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
C CG+ GH+ ++CP + R + + G + S + R H +
Sbjct: 1295 CRVCGKIGHYMKDCP------KRKRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTR 1345
Query: 66 DCDLQEDVEACYNCGRGGHIAKDCKEPKREREQ 98
D D+ C+ CG GH+ ++C E K R++
Sbjct: 1346 DFRDPRDLR-CFICGDAGHVRRECPEVKLARQR 1377
>gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens]
Length = 674
Score = 44.7 bits (104), Expect = 4e-05
Identities = 41/147 (27%), Positives = 57/147 (38%), Gaps = 34/147 (23%)
Query: 55 YRCGESG-------HLAKDCDLQ--EDVEACYNCG----RGGHIAKDCKEPKREREQCCY 101
Y+C E G HLA+ D+ E +C CG R H+ + E+ C
Sbjct: 507 YKCNECGKVFRQNSHLAQHRDIHTGEKPYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCN 566
Query: 102 NCGKP----GHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETGH 147
CGK HLAR + +K +SC E G + +K T K Y+C E
Sbjct: 567 ECGKVFSRNSHLARHRNIHTGEKPHSCNECGKVFSRNSHLARHRKIHTGEKLYKCNECSK 626
Query: 148 VAINCSKTSE-------VNCYRCGESG 167
V S+ ++ V Y C E G
Sbjct: 627 VFSRNSRLAQHRNIHTGVKPYSCNECG 653
Score = 39.3 bits (90), Expect = 0.002
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 51 PDICYRCGE----SGHLAKDCDLQ--EDVEACYNCG----RGGHIAKDCKEPKREREQCC 100
P C CG+ + HL + ++ E +C CG R H+A+ E+ C
Sbjct: 534 PYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSC 593
Query: 101 YNCGKP----GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS 156
CGK HLAR +K Y C E + +++ +R TG +C++
Sbjct: 594 NECGKVFSRNSHLARHRKIHTGEKLYKCNECSKVFSRNSRLAQHRNIHTGVKPYSCNECG 653
Query: 157 EVNCYRCGESGHLARECTI 175
+V ++ L + C+I
Sbjct: 654 KV----FSKNSILVQHCSI 668
Score = 38.1 bits (87), Expect = 0.004
Identities = 39/147 (26%), Positives = 51/147 (34%), Gaps = 24/147 (16%)
Query: 51 PDICYRCGE----SGHLAKDCDLQ--EDVEACYNCGR----GGHIAKDCKEPKREREQCC 100
P C CG+ L C + E C CG+ ++ + K E+ C
Sbjct: 450 PYECIDCGKVFRHKSSLTYHCRIHTGEKPYKCNECGKVFSQNSNLQRHRKIHTGEKLYKC 509
Query: 101 YNCGKP----GHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETG 146
CGK HLA+ D +K YSC E G + + T K Y C E G
Sbjct: 510 NECGKVFRQNSHLAQHRDIHTGEKPYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCNECG 569
Query: 147 HVAINCSKTSEVNCYRCGESGHLAREC 173
V S + GE H EC
Sbjct: 570 KVFSRNSHLARHRNIHTGEKPHSCNEC 596
Score = 30.0 bits (66), Expect = 1.1
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 21/101 (20%)
Query: 95 EREQCCYNCGK-----PGHLARDCDHADEQ--KCYSCGE-FGHI------QKDCTKVKCY 140
E+ C CGK H E+ KC CG+ F I +K T K Y
Sbjct: 336 EKPYDCKECGKVFRHKSSLTTHQTVHTGERPYKCNECGKGFSRIAFLARHRKVHTGEKPY 395
Query: 141 RCGETGHVAINCSKTSE-------VNCYRCGESGHLARECT 174
+C E G V I S+ + Y+C E G R C+
Sbjct: 396 KCNECGKVFIGNSRLARHRKIHTGGRRYKCNECGKAFRTCS 436
Score = 28.5 bits (62), Expect = 3.2
Identities = 32/126 (25%), Positives = 44/126 (34%), Gaps = 20/126 (15%)
Query: 55 YRCGESGH-------LAKDCDLQ--EDVEACYNCGR----GGHIAKDCKEPKREREQCCY 101
Y+C E G LA+ + E C CG+ +A+ K R C
Sbjct: 367 YKCNECGKGFSRIAFLARHRKVHTGEKPYKCNECGKVFIGNSRLARHRKIHTGGRRYKCN 426
Query: 102 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCY 161
CGK R C GE + DC KV ++ T H I+ + Y
Sbjct: 427 ECGK---AFRTCSDLTAHLLIHTGEKPYECIDCGKVFRHKSSLTYHCRIHTGEKP----Y 479
Query: 162 RCGESG 167
+C E G
Sbjct: 480 KCNECG 485
Score = 26.9 bits (58), Expect = 9.4
Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
Query: 76 CYNCGR----GGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 127
C +CG + A+ + E+ CGK HLA+ QK Y+ E
Sbjct: 229 CSDCGEIFSSNSNFAQHQRIHTGEKPYKYNECGKVFNQNSHLAQHQKIHTGQKPYNNKEC 288
Query: 128 GHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
G + +K T K Y+C E G CS + GE + +EC
Sbjct: 289 GKVFSHHAYLAQHRKIHTGEKPYKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKEC 344
>gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens]
Length = 661
Score = 44.7 bits (104), Expect = 4e-05
Identities = 41/147 (27%), Positives = 57/147 (38%), Gaps = 34/147 (23%)
Query: 55 YRCGESG-------HLAKDCDLQ--EDVEACYNCG----RGGHIAKDCKEPKREREQCCY 101
Y+C E G HLA+ D+ E +C CG R H+ + E+ C
Sbjct: 494 YKCNECGKVFRQNSHLAQHRDIHTGEKPYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCN 553
Query: 102 NCGKP----GHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETGH 147
CGK HLAR + +K +SC E G + +K T K Y+C E
Sbjct: 554 ECGKVFSRNSHLARHRNIHTGEKPHSCNECGKVFSRNSHLARHRKIHTGEKLYKCNECSK 613
Query: 148 VAINCSKTSE-------VNCYRCGESG 167
V S+ ++ V Y C E G
Sbjct: 614 VFSRNSRLAQHRNIHTGVKPYSCNECG 640
Score = 39.3 bits (90), Expect = 0.002
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 51 PDICYRCGE----SGHLAKDCDLQ--EDVEACYNCG----RGGHIAKDCKEPKREREQCC 100
P C CG+ + HL + ++ E +C CG R H+A+ E+ C
Sbjct: 521 PYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSC 580
Query: 101 YNCGKP----GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS 156
CGK HLAR +K Y C E + +++ +R TG +C++
Sbjct: 581 NECGKVFSRNSHLARHRKIHTGEKLYKCNECSKVFSRNSRLAQHRNIHTGVKPYSCNECG 640
Query: 157 EVNCYRCGESGHLARECTI 175
+V ++ L + C+I
Sbjct: 641 KV----FSKNSILVQHCSI 655
Score = 38.1 bits (87), Expect = 0.004
Identities = 39/147 (26%), Positives = 51/147 (34%), Gaps = 24/147 (16%)
Query: 51 PDICYRCGE----SGHLAKDCDLQ--EDVEACYNCGR----GGHIAKDCKEPKREREQCC 100
P C CG+ L C + E C CG+ ++ + K E+ C
Sbjct: 437 PYECIDCGKVFRHKSSLTYHCRIHTGEKPYKCNECGKVFSQNSNLQRHRKIHTGEKLYKC 496
Query: 101 YNCGKP----GHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETG 146
CGK HLA+ D +K YSC E G + + T K Y C E G
Sbjct: 497 NECGKVFRQNSHLAQHRDIHTGEKPYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCNECG 556
Query: 147 HVAINCSKTSEVNCYRCGESGHLAREC 173
V S + GE H EC
Sbjct: 557 KVFSRNSHLARHRNIHTGEKPHSCNEC 583
Score = 30.0 bits (66), Expect = 1.1
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 21/101 (20%)
Query: 95 EREQCCYNCGK-----PGHLARDCDHADEQ--KCYSCGE-FGHI------QKDCTKVKCY 140
E+ C CGK H E+ KC CG+ F I +K T K Y
Sbjct: 323 EKPYDCKECGKVFRHKSSLTTHQTVHTGERPYKCNECGKGFSRIAFLARHRKVHTGEKPY 382
Query: 141 RCGETGHVAINCSKTSE-------VNCYRCGESGHLARECT 174
+C E G V I S+ + Y+C E G R C+
Sbjct: 383 KCNECGKVFIGNSRLARHRKIHTGGRRYKCNECGKAFRTCS 423
Score = 28.5 bits (62), Expect = 3.2
Identities = 32/126 (25%), Positives = 44/126 (34%), Gaps = 20/126 (15%)
Query: 55 YRCGESGH-------LAKDCDLQ--EDVEACYNCGR----GGHIAKDCKEPKREREQCCY 101
Y+C E G LA+ + E C CG+ +A+ K R C
Sbjct: 354 YKCNECGKGFSRIAFLARHRKVHTGEKPYKCNECGKVFIGNSRLARHRKIHTGGRRYKCN 413
Query: 102 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCY 161
CGK R C GE + DC KV ++ T H I+ + Y
Sbjct: 414 ECGK---AFRTCSDLTAHLLIHTGEKPYECIDCGKVFRHKSSLTYHCRIHTGEKP----Y 466
Query: 162 RCGESG 167
+C E G
Sbjct: 467 KCNECG 472
Score = 26.9 bits (58), Expect = 9.4
Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
Query: 76 CYNCGR----GGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 127
C +CG + A+ + E+ CGK HLA+ QK Y+ E
Sbjct: 216 CSDCGEIFSSNSNFAQHQRIHTGEKPYKYNECGKVFNQNSHLAQHQKIHTGQKPYNNKEC 275
Query: 128 GHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
G + +K T K Y+C E G CS + GE + +EC
Sbjct: 276 GKVFSHHAYLAQHRKIHTGEKPYKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKEC 331
>gi|190610025 zinc finger protein 93 homolog [Homo sapiens]
Length = 738
Score = 43.1 bits (100), Expect = 1e-04
Identities = 44/192 (22%), Positives = 69/192 (35%), Gaps = 43/192 (22%)
Query: 8 KCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCG----ESGHL 63
+ G+ +W EC G + +++ R + P C+ CG +S HL
Sbjct: 313 RTGKKRYWCHECGKGFSQSSNLQTHQR----------VHTGEKPYTCHECGKSFNQSSHL 362
Query: 64 AKDCDLQ--EDVEACYNCGRGGHIAKD----CKEPKREREQCCYNCGKPGHLARDCDHAD 117
+ E C +CG+G + D C+ E+ C CGK G R A
Sbjct: 363 YAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGK-GFTQRSHLQAH 421
Query: 118 E-----QKCYSCGEFG-------------HIQKDCTKVKCYRCGETGHVAINCSKTSEVN 159
E +K Y CG+ G + + KC CG+ ++ N V+
Sbjct: 422 ERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVH 481
Query: 160 C----YRCGESG 167
Y+C E G
Sbjct: 482 TGEKPYKCEECG 493
>gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 42.0 bits (97), Expect = 3e-04
Identities = 38/141 (26%), Positives = 51/141 (36%), Gaps = 31/141 (21%)
Query: 51 PDICYRCGESGH------LAKDCDLQEDVEACYNCGRGGHIAKDCKEPKR----EREQCC 100
P C CG++ + L K E C CG+ + + + KR E+ C
Sbjct: 447 PHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDECGKAFNQCSNLTKHKRIHTGEKPYKC 506
Query: 101 YNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS---- 156
CGK + C H E K GE K Y+C E G V I+CS S
Sbjct: 507 EECGKAFNR---CSHLTEHKRIHTGE-----------KPYKCEECGKVFISCSSLSNHKR 552
Query: 157 ---EVNCYRCGESGHLARECT 174
CY+ E G C+
Sbjct: 553 IHTREKCYKSEECGKTFNHCS 573
Score = 34.7 bits (78), Expect = 0.045
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 76 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKP-GHLARDCDHA---DEQKCYSCGEF 127
C C +I+ +R E+ C CGK H + +H +E+K Y C E
Sbjct: 338 CKECDNSFYISSVLTPLQRIHTAEKSYKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKEC 397
Query: 128 GHIQKDCTKV----------KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
G + K T + K Y+C E G + S ++ G+ H EC
Sbjct: 398 GKVFKSFTSLSNHIIIHTGEKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
>gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 42.0 bits (97), Expect = 3e-04
Identities = 38/141 (26%), Positives = 51/141 (36%), Gaps = 31/141 (21%)
Query: 51 PDICYRCGESGH------LAKDCDLQEDVEACYNCGRGGHIAKDCKEPKR----EREQCC 100
P C CG++ + L K E C CG+ + + + KR E+ C
Sbjct: 447 PHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDECGKAFNQCSNLTKHKRIHTGEKPYKC 506
Query: 101 YNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS---- 156
CGK + C H E K GE K Y+C E G V I+CS S
Sbjct: 507 EECGKAFNR---CSHLTEHKRIHTGE-----------KPYKCEECGKVFISCSSLSNHKR 552
Query: 157 ---EVNCYRCGESGHLARECT 174
CY+ E G C+
Sbjct: 553 IHTREKCYKSEECGKTFNHCS 573
Score = 34.7 bits (78), Expect = 0.045
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 76 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKP-GHLARDCDHA---DEQKCYSCGEF 127
C C +I+ +R E+ C CGK H + +H +E+K Y C E
Sbjct: 338 CKECDNSFYISSVLTPLQRIHTAEKSYKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKEC 397
Query: 128 GHIQKDCTKV----------KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
G + K T + K Y+C E G + S ++ G+ H EC
Sbjct: 398 GKVFKSFTSLSNHIIIHTGKKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
>gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 42.0 bits (97), Expect = 3e-04
Identities = 38/141 (26%), Positives = 51/141 (36%), Gaps = 31/141 (21%)
Query: 51 PDICYRCGESGH------LAKDCDLQEDVEACYNCGRGGHIAKDCKEPKR----EREQCC 100
P C CG++ + L K E C CG+ + + + KR E+ C
Sbjct: 447 PHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDECGKAFNQCSNLTKHKRIHTGEKPYKC 506
Query: 101 YNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS---- 156
CGK + C H E K GE K Y+C E G V I+CS S
Sbjct: 507 EECGKAFNR---CSHLTEHKRIHTGE-----------KPYKCEECGKVFISCSSLSNHKR 552
Query: 157 ---EVNCYRCGESGHLARECT 174
CY+ E G C+
Sbjct: 553 IHTREKCYKSEECGKTFNHCS 573
Score = 34.7 bits (78), Expect = 0.045
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 76 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKP-GHLARDCDHA---DEQKCYSCGEF 127
C C +I+ +R E+ C CGK H + +H +E+K Y C E
Sbjct: 338 CKECDNSFYISSVLTPLQRIHTAEKSYKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKEC 397
Query: 128 GHIQKDCTKV----------KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
G + K T + K Y+C E G + S ++ G+ H EC
Sbjct: 398 GKVFKSFTSLSNHIIIHTGKKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
>gi|189571667 zinc finger protein 696 [Homo sapiens]
Length = 374
Score = 42.0 bits (97), Expect = 3e-04
Identities = 47/194 (24%), Positives = 67/194 (34%), Gaps = 38/194 (19%)
Query: 16 ARECPTGGGRG--RGMRSRGRGGFTSD----------RGFQFVSSSLPDICYRCGESGHL 63
ARE P G RG ++ G+ G SD G + P C CG S
Sbjct: 79 ARERPGGSPRGPVTSEKTGGQSGLESDVPPNAGPGAEGGGSWKGRPFP--CGACGRSFKC 136
Query: 64 AKDCDLQEDVEA------CYNCGRG----GHIAKDCKEPKREREQCCYNCGKP-----GH 108
+ D + + C +CG+ H+ + + ER C CGK
Sbjct: 137 SSDAAKHRSIHSGEKPYECSDCGKAFIHSSHVVRHQRAHSGERPYACAECGKAFGQSFNL 196
Query: 109 LARDCDHADEQK--CYSCGEFGHIQKDCTK-------VKCYRCGETGHVAINCSKTSEVN 159
L H E+ C CG+ + D K + Y CGE G ++ S
Sbjct: 197 LRHQRVHTGEKPYACADCGKAFGQRSDAAKHRRTHTGERLYACGECGKRFLHSSNVVRHR 256
Query: 160 CYRCGESGHLAREC 173
GE+ + REC
Sbjct: 257 RTHHGENPYECREC 270
>gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Homo
sapiens]
Length = 1644
Score = 42.0 bits (97), Expect = 3e-04
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 54 CYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPK--REREQCCYNCGKPG--HL 109
C CG+ GH KDC ++ + KD +E K E E+ + P H
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSLLFRLK-------KKDSEEEKEGNEEEKDSRDVLDPRDLHD 1347
Query: 110 ARDCDHADEQKCYSCGEFGHIQKDCTKVKCYR 141
RD + +C+ CG+ GH++++C +VK R
Sbjct: 1348 TRDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1379
Score = 38.1 bits (87), Expect = 0.004
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 20/89 (22%)
Query: 97 EQCCYNCGKPGHLARDCDH------------ADEQKCYSCGEFGHIQKDCTKVKCYRCGE 144
++CC CGK GH +DC ++E+K E +KD V R
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEK-----EGNEEEKDSRDVLDPR--- 1343
Query: 145 TGHVAINCSKTSEVNCYRCGESGHLAREC 173
H + ++ C+ CG++GH+ REC
Sbjct: 1344 DLHDTRDFRDPRDLRCFICGDAGHVRREC 1372
Score = 33.5 bits (75), Expect = 0.100
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
C CG+ GH+ ++CP + R + + G + S + R H +
Sbjct: 1295 CRVCGKIGHYMKDCPKR--KSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTR 1349
Query: 66 DCDLQEDVEACYNCGRGGHIAKDCKEPKREREQ 98
D D+ C+ CG GH+ ++C E K R++
Sbjct: 1350 DFRDPRDLR-CFICGDAGHVRRECPEVKLARQR 1381
>gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Homo
sapiens]
Length = 1645
Score = 41.6 bits (96), Expect = 4e-04
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 54 CYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPK--REREQCCYNCGKPG--HL 109
C CG+ GH KDC ++ + + KD +E K E E+ + P H
Sbjct: 1295 CRVCGKIGHYMKDCPKRKS-SLLFRLKK-----KDSEEEKEGNEEEKDSRDVLDPRDLHD 1348
Query: 110 ARDCDHADEQKCYSCGEFGHIQKDCTKVKCYR 141
RD + +C+ CG+ GH++++C +VK R
Sbjct: 1349 TRDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1380
Score = 37.7 bits (86), Expect = 0.005
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 97 EQCCYNCGKPGHLARDCDHADEQKCYSCG--------EFGHIQKDCTKVKCYRCGETGHV 148
++CC CGK GH +DC + E +KD V R H
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKSSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHD 1348
Query: 149 AINCSKTSEVNCYRCGESGHLAREC 173
+ ++ C+ CG++GH+ REC
Sbjct: 1349 TRDFRDPRDLRCFICGDAGHVRREC 1373
Score = 32.3 bits (72), Expect = 0.22
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
C CG+ GH+ ++CP R + + G + S + R H +
Sbjct: 1295 CRVCGKIGHYMKDCPKRKS-SLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTR 1350
Query: 66 DCDLQEDVEACYNCGRGGHIAKDCKEPKREREQ 98
D D+ C+ CG GH+ ++C E K R++
Sbjct: 1351 DFRDPRDLR-CFICGDAGHVRRECPEVKLARQR 1382
>gi|224177533 zinc finger protein LOC400713 [Homo sapiens]
Length = 577
Score = 40.4 bits (93), Expect = 8e-04
Identities = 39/155 (25%), Positives = 56/155 (36%), Gaps = 31/155 (20%)
Query: 51 PDICYRCG----ESGHLAKDCDLQ--EDVEACYNCG----RGGHIAKDCKEPKREREQCC 100
P C+ CG ++ HLA + E C CG R H+A+ K E+ C
Sbjct: 267 PYKCHECGKVFTQNSHLANHHRIHTGEKPYKCNECGKVFNRNAHLARHQKIHSGEKPYKC 326
Query: 101 YNCGKP-----GHLARDCDHADEQ--KCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCS 153
CGK G A H E+ KC CG+ + T+ + GE + C
Sbjct: 327 KECGKAFSGGSGLTAHLVIHTGEKLYKCNKCGKVFNRNAHLTRHQRIHTGEKPYECKECG 386
Query: 154 KT--------------SEVNCYRCGESGHLARECT 174
K + Y+C E G R+C+
Sbjct: 387 KVFRHKFCLTNHHRMHTGEQPYKCNECGKAFRDCS 421
Score = 35.8 bits (81), Expect = 0.020
Identities = 35/140 (25%), Positives = 51/140 (36%), Gaps = 22/140 (15%)
Query: 47 SSSLPDICYRCGES--------GHLAKDCDLQEDVEACYNCG----RGGHIAKDCKEPKR 94
S P C CG++ HL E + C CG R H+ + +
Sbjct: 319 SGEKPYKCKECGKAFSGGSGLTAHLV--IHTGEKLYKCNKCGKVFNRNAHLTRHQRIHTG 376
Query: 95 EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHV 148
E+ C CGK + C H EQ Y C E G +DC+ + + TG
Sbjct: 377 EKPYECKECGKVFR-HKFCLTNHHRMHTGEQP-YKCNECGKAFRDCSGLTAHLLIHTGEK 434
Query: 149 AINCSKTSEVNCYRCGESGH 168
C + ++V +R S H
Sbjct: 435 PYKCKECAKVFRHRLSLSNH 454
Score = 30.4 bits (67), Expect = 0.85
Identities = 32/145 (22%), Positives = 47/145 (32%), Gaps = 26/145 (17%)
Query: 54 CYRCGE----SGHLAKDCDLQEDVEACYNCGRGGHIAKD----CKEPKREREQCCYNCGK 105
C +CG+ + HL + + E Y C G + + + + Y C +
Sbjct: 354 CNKCGKVFNRNAHLTRHQRIHTG-EKPYECKECGKVFRHKFCLTNHHRMHTGEQPYKCNE 412
Query: 106 PGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-----------------KCYRCGETGHV 148
G RDC GE + K+C KV K YRC E G
Sbjct: 413 CGKAFRDCSGLTAHLLIHTGEKPYKCKECAKVFRHRLSLSNHQRFHTGEKPYRCDECGKD 472
Query: 149 AINCSKTSEVNCYRCGESGHLAREC 173
S + + GE + EC
Sbjct: 473 FTRNSNLANHHRIHTGEKPYKCSEC 497
Score = 28.9 bits (63), Expect = 2.5
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 18/89 (20%)
Query: 76 CYNCG----RGGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 127
C CG R ++A + E+ C C K HLAR +K Y C E
Sbjct: 466 CDECGKDFTRNSNLANHHRIHTGEKPYKCSECHKVFSHNSHLARHRQIHTGEKSYKCNEC 525
Query: 128 GHI----------QKDCTKVKCYRCGETG 146
G + ++ T K YRC E G
Sbjct: 526 GKVFSHKLYLKKHERIHTGEKPYRCHECG 554
Score = 27.3 bits (59), Expect = 7.2
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 120 KCYSCGE-FGHI------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 172
KC+ CG+ F I Q+ T K Y+C E G V S + + GE + E
Sbjct: 241 KCHECGKLFNRISLLARHQRIHTGEKPYKCHECGKVFTQNSHLANHHRIHTGEKPYKCNE 300
Query: 173 C 173
C
Sbjct: 301 C 301
>gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens]
Length = 1495
Score = 39.3 bits (90), Expect = 0.002
Identities = 36/124 (29%), Positives = 46/124 (37%), Gaps = 39/124 (31%)
Query: 54 CYRCGESGHLAKDCDLQE------DVEACYNCGRGGHIAKDCKEPKR------ERE---- 97
C CG+ GH KDC ++ D E N + K KE K ERE
Sbjct: 1347 CRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKYTEREVSTK 1406
Query: 98 -----QCCYNCGKPGHLARDC----------------DHAD--EQKCYSCGEFGHIQKDC 134
QC KP A D D D E++C+ CG GHI+K+C
Sbjct: 1407 EDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGHIKKEC 1466
Query: 135 TKVK 138
+ K
Sbjct: 1467 PQFK 1470
Score = 31.6 bits (70), Expect = 0.38
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSR 32
+ CF CGR GH +ECP G + S+
Sbjct: 1448 LREKRCFICGREGHIKKECPQFKGSSGSLSSK 1479
Score = 30.0 bits (66), Expect = 1.1
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 22/128 (17%)
Query: 68 DLQEDVEACYNCGRGGHIAKDC---KEPKREREQ-------CCYNCGKPGHLARDCDHAD 117
+L + C CG+ GH KDC ++ +R R+Q N K ++ +
Sbjct: 1339 ELAPNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKY 1398
Query: 118 EQKCYSCGEFGHIQKDCTKVKCYRCG-ETGHVAI-----------NCSKTSEVNCYRCGE 165
++ S E IQ K K R + G I + E C+ CG
Sbjct: 1399 TEREVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGR 1458
Query: 166 SGHLAREC 173
GH+ +EC
Sbjct: 1459 EGHIKKEC 1466
>gi|169170082 PREDICTED: hypothetical protein LOC728927 [Homo
sapiens]
Length = 427
Score = 38.9 bits (89), Expect = 0.002
Identities = 43/144 (29%), Positives = 55/144 (38%), Gaps = 33/144 (22%)
Query: 41 RGFQFVS--SSLPDI-----CYRCGESGHLAKDCDLQED---------VEACYNCGRGGH 84
RGFQ S + DI C++C E G KDC L D VE CY C G
Sbjct: 152 RGFQLCSIFTEHKDIFSREKCHKCEECG---KDCRLFSDFTRHKKIHTVERCYKCEECGK 208
Query: 85 IAK---DCKEPKR----EREQCCYNCGKPGHLARDC-----DHADEQ--KCYSCGEFGHI 130
K + E KR E+ C CGK + +H ++ KC CG+
Sbjct: 209 AFKKFSNLTEHKRVHTGEKPYKCEGCGKTFTCSSTLVKHKRNHTGDRPYKCEECGKAFKC 268
Query: 131 QKDCTKVKCYRCGETGHVAINCSK 154
D T K GE + C+K
Sbjct: 269 FSDLTNHKRIHTGEKPYKCEECNK 292
Score = 35.4 bits (80), Expect = 0.026
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 18/102 (17%)
Query: 76 CYNCGRGGHIAKDCKEPKR--EREQC--CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 131
C CGRG + E K RE+C C CGK C +F +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKD--------------CRLFSDFTRHK 192
Query: 132 KDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
K T +CY+C E G S +E GE + C
Sbjct: 193 KIHTVERCYKCEECGKAFKKFSNLTEHKRVHTGEKPYKCEGC 234
Score = 33.9 bits (76), Expect = 0.077
Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 19/109 (17%)
Query: 54 CYRCGESGHLA------KDCDLQEDVEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKP 106
C +CG L KD +E C CG+ + D + K + CY C +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKDCRLFSDFTRHKKIHTVERCYKCEEC 206
Query: 107 GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKT 155
G + + E K GE KC CG+T CS T
Sbjct: 207 GKAFKKFSNLTEHKRVHTGE--------KPYKCEGCGKT----FTCSST 243
>gi|169170430 PREDICTED: similar to hCG40110 [Homo sapiens]
Length = 427
Score = 38.9 bits (89), Expect = 0.002
Identities = 43/144 (29%), Positives = 55/144 (38%), Gaps = 33/144 (22%)
Query: 41 RGFQFVS--SSLPDI-----CYRCGESGHLAKDCDLQED---------VEACYNCGRGGH 84
RGFQ S + DI C++C E G KDC L D VE CY C G
Sbjct: 152 RGFQLCSIFTEHKDIFSREKCHKCEECG---KDCRLFSDFTRHKKIHTVERCYKCEECGK 208
Query: 85 IAK---DCKEPKR----EREQCCYNCGKPGHLARDC-----DHADEQ--KCYSCGEFGHI 130
K + E KR E+ C CGK + +H ++ KC CG+
Sbjct: 209 AFKKFSNLTEHKRVHTGEKPYKCEGCGKTFTCSSTLVKHKRNHTGDRPYKCEECGKAFKC 268
Query: 131 QKDCTKVKCYRCGETGHVAINCSK 154
D T K GE + C+K
Sbjct: 269 FSDLTNHKRIHTGEKPYKCEECNK 292
Score = 35.4 bits (80), Expect = 0.026
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 18/102 (17%)
Query: 76 CYNCGRGGHIAKDCKEPKR--EREQC--CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 131
C CGRG + E K RE+C C CGK C +F +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKD--------------CRLFSDFTRHK 192
Query: 132 KDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
K T +CY+C E G S +E GE + C
Sbjct: 193 KIHTVERCYKCEECGKAFKKFSNLTEHKRVHTGEKPYKCEGC 234
Score = 33.9 bits (76), Expect = 0.077
Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 19/109 (17%)
Query: 54 CYRCGESGHLA------KDCDLQEDVEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKP 106
C +CG L KD +E C CG+ + D + K + CY C +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKDCRLFSDFTRHKKIHTVERCYKCEEC 206
Query: 107 GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKT 155
G + + E K GE KC CG+T CS T
Sbjct: 207 GKAFKKFSNLTEHKRVHTGE--------KPYKCEGCGKT----FTCSST 243
>gi|169213834 PREDICTED: similar to hCG36734 [Homo sapiens]
Length = 560
Score = 38.5 bits (88), Expect = 0.003
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 31/148 (20%)
Query: 51 PDICYRCGESGHLAKDCDLQEDVEA------CYNCGRGGHIAKDCKEPKR----EREQCC 100
P C CG++ ++ + + + C CG+ ++ KR E+ C
Sbjct: 285 PYKCEECGKTFNMFSSLNNHKRIHTGEKPYKCKECGKAFNVFSSLNNHKRIHTGEKPYKC 344
Query: 101 YNCGK----PGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-------------KCYRCG 143
CGK P HLA +K Y C E G + + KC CG
Sbjct: 345 EECGKAFNQPSHLATHKRIHTGEKLYKCEECGKAFSQSSHITTHKRIHTGEKPYKCEECG 404
Query: 144 ETGHVAINCSKTSEVNC----YRCGESG 167
+ V+++ + ++ Y+C E G
Sbjct: 405 KAFKVSVHLTTHKRIHTGEKPYKCEECG 432
Score = 32.3 bits (72), Expect = 0.22
Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 24/147 (16%)
Query: 51 PDICYRCGESGHLAKDCDLQEDVEA------CYNCGRGGHIAKDCKEPKR----EREQCC 100
P C CG++ +++ + + + C CG+ ++ KR E+ C
Sbjct: 257 PYKCEECGKAFNVSSSLNNHKRIHTGEKPYKCEECGKTFNMFSSLNNHKRIHTGEKPYKC 316
Query: 101 YNCGKPGHLARDCD-----HADEQ--KCYSCGEF----GHI---QKDCTKVKCYRCGETG 146
CGK ++ + H E+ KC CG+ H+ ++ T K Y+C E G
Sbjct: 317 KECGKAFNVFSSLNNHKRIHTGEKPYKCEECGKAFNQPSHLATHKRIHTGEKLYKCEECG 376
Query: 147 HVAINCSKTSEVNCYRCGESGHLAREC 173
S + GE + EC
Sbjct: 377 KAFSQSSHITTHKRIHTGEKPYKCEEC 403
Score = 32.0 bits (71), Expect = 0.29
Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 76 CYNCGRG----GHIAKDCKEPKREREQCCYNCGKPGHLARDCD-----HADEQ--KCYSC 124
C CG+ H+ K + R C CGK + + H E+ KC C
Sbjct: 204 CKECGKSFCMLSHLTKHERNHTRVNCYKCEECGKAFSVPSKLNNHKRIHTGEKPYKCEEC 263
Query: 125 GEFGHIQKDCTKVKCYRCGETGHVAINCSKT----SEVNCYR---CGESGHLAREC 173
G+ ++ K GE + C KT S +N ++ GE + +EC
Sbjct: 264 GKAFNVSSSLNNHKRIHTGEKPYKCEECGKTFNMFSSLNNHKRIHTGEKPYKCKEC 319
Score = 31.6 bits (70), Expect = 0.38
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 120 KCYSCGE----FGHIQK---DCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 172
KC CG+ H+ K + T+V CY+C E G SK + GE + E
Sbjct: 203 KCKECGKSFCMLSHLTKHERNHTRVNCYKCEECGKAFSVPSKLNNHKRIHTGEKPYKCEE 262
Query: 173 C 173
C
Sbjct: 263 C 263
Score = 31.2 bits (69), Expect = 0.50
Identities = 39/152 (25%), Positives = 55/152 (36%), Gaps = 33/152 (21%)
Query: 54 CYRCG----ESGHLA--KDCDLQEDVEACYNCGRGGHIAKDCKEPKR----EREQCCYNC 103
C CG +S H+ K E C CG+ ++ KR E+ C C
Sbjct: 372 CEECGKAFSQSSHITTHKRIHTGEKPYKCEECGKAFKVSVHLTTHKRIHTGEKPYKCEEC 431
Query: 104 GKPGHLARDCD-----HADEQ--KCYSCGEFGHIQKDC--------TKVKCYRCGETG-- 146
GK + + H E+ KC CG+ G Q TK K Y+C E G
Sbjct: 432 GKAFNQSSALTTHKIIHTGERPYKCKQCGK-GFSQSSTLTKHKIIHTKEKPYKCEECGKA 490
Query: 147 ---HVAINCSKT--SEVNCYRCGESGHLAREC 173
+ +N K + Y+C E G +C
Sbjct: 491 FNQYSTLNKHKIIHAREKPYKCEECGKAFNKC 522
>gi|169214277 PREDICTED: similar to hCG36734 [Homo sapiens]
Length = 560
Score = 38.5 bits (88), Expect = 0.003
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 31/148 (20%)
Query: 51 PDICYRCGESGHLAKDCDLQEDVEA------CYNCGRGGHIAKDCKEPKR----EREQCC 100
P C CG++ ++ + + + C CG+ ++ KR E+ C
Sbjct: 285 PYKCEECGKTFNMFSSLNNHKRIHTGEKPYKCKECGKAFNVFSSLNNHKRIHTGEKPYKC 344
Query: 101 YNCGK----PGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-------------KCYRCG 143
CGK P HLA +K Y C E G + + KC CG
Sbjct: 345 EECGKAFNQPSHLATHKRIHTGEKLYKCEECGKAFSQSSHITTHKRIHTGEKPYKCEECG 404
Query: 144 ETGHVAINCSKTSEVNC----YRCGESG 167
+ V+++ + ++ Y+C E G
Sbjct: 405 KAFKVSVHLTTHKRIHTGEKPYKCEECG 432
Score = 32.3 bits (72), Expect = 0.22
Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 24/147 (16%)
Query: 51 PDICYRCGESGHLAKDCDLQEDVEA------CYNCGRGGHIAKDCKEPKR----EREQCC 100
P C CG++ +++ + + + C CG+ ++ KR E+ C
Sbjct: 257 PYKCEECGKAFNVSSSLNNHKRIHTGEKPYKCEECGKTFNMFSSLNNHKRIHTGEKPYKC 316
Query: 101 YNCGKPGHLARDCD-----HADEQ--KCYSCGEF----GHI---QKDCTKVKCYRCGETG 146
CGK ++ + H E+ KC CG+ H+ ++ T K Y+C E G
Sbjct: 317 KECGKAFNVFSSLNNHKRIHTGEKPYKCEECGKAFNQPSHLATHKRIHTGEKLYKCEECG 376
Query: 147 HVAINCSKTSEVNCYRCGESGHLAREC 173
S + GE + EC
Sbjct: 377 KAFSQSSHITTHKRIHTGEKPYKCEEC 403
Score = 32.0 bits (71), Expect = 0.29
Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 76 CYNCGRG----GHIAKDCKEPKREREQCCYNCGKPGHLARDCD-----HADEQ--KCYSC 124
C CG+ H+ K + R C CGK + + H E+ KC C
Sbjct: 204 CKECGKSFCMLSHLTKHERNHTRVNCYKCEECGKAFSVPSKLNNHKRIHTGEKPYKCEEC 263
Query: 125 GEFGHIQKDCTKVKCYRCGETGHVAINCSKT----SEVNCYR---CGESGHLAREC 173
G+ ++ K GE + C KT S +N ++ GE + +EC
Sbjct: 264 GKAFNVSSSLNNHKRIHTGEKPYKCEECGKTFNMFSSLNNHKRIHTGEKPYKCKEC 319
Score = 31.6 bits (70), Expect = 0.38
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 120 KCYSCGE----FGHIQK---DCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 172
KC CG+ H+ K + T+V CY+C E G SK + GE + E
Sbjct: 203 KCKECGKSFCMLSHLTKHERNHTRVNCYKCEECGKAFSVPSKLNNHKRIHTGEKPYKCEE 262
Query: 173 C 173
C
Sbjct: 263 C 263
Score = 31.2 bits (69), Expect = 0.50
Identities = 39/152 (25%), Positives = 55/152 (36%), Gaps = 33/152 (21%)
Query: 54 CYRCG----ESGHLA--KDCDLQEDVEACYNCGRGGHIAKDCKEPKR----EREQCCYNC 103
C CG +S H+ K E C CG+ ++ KR E+ C C
Sbjct: 372 CEECGKAFSQSSHITTHKRIHTGEKPYKCEECGKAFKVSVHLTTHKRIHTGEKPYKCEEC 431
Query: 104 GKPGHLARDCD-----HADEQ--KCYSCGEFGHIQKDC--------TKVKCYRCGETG-- 146
GK + + H E+ KC CG+ G Q TK K Y+C E G
Sbjct: 432 GKAFNQSSALTTHKIIHTGERPYKCKQCGK-GFSQSSTLTKHKIIHTKEKPYKCEECGKA 490
Query: 147 ---HVAINCSKT--SEVNCYRCGESGHLAREC 173
+ +N K + Y+C E G +C
Sbjct: 491 FNQYSTLNKHKIIHAREKPYKCEECGKAFNKC 522
>gi|169213622 PREDICTED: similar to hCG36734 [Homo sapiens]
Length = 560
Score = 38.5 bits (88), Expect = 0.003
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 31/148 (20%)
Query: 51 PDICYRCGESGHLAKDCDLQEDVEA------CYNCGRGGHIAKDCKEPKR----EREQCC 100
P C CG++ ++ + + + C CG+ ++ KR E+ C
Sbjct: 285 PYKCEECGKTFNMFSSLNNHKRIHTGEKPYKCKECGKAFNVFSSLNNHKRIHTGEKPYKC 344
Query: 101 YNCGK----PGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-------------KCYRCG 143
CGK P HLA +K Y C E G + + KC CG
Sbjct: 345 EECGKAFNQPSHLATHKRIHTGEKLYKCEECGKAFSQSSHITTHKRIHTGEKPYKCEECG 404
Query: 144 ETGHVAINCSKTSEVNC----YRCGESG 167
+ V+++ + ++ Y+C E G
Sbjct: 405 KAFKVSVHLTTHKRIHTGEKPYKCEECG 432
Score = 32.3 bits (72), Expect = 0.22
Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 24/147 (16%)
Query: 51 PDICYRCGESGHLAKDCDLQEDVEA------CYNCGRGGHIAKDCKEPKR----EREQCC 100
P C CG++ +++ + + + C CG+ ++ KR E+ C
Sbjct: 257 PYKCEECGKAFNVSSSLNNHKRIHTGEKPYKCEECGKTFNMFSSLNNHKRIHTGEKPYKC 316
Query: 101 YNCGKPGHLARDCD-----HADEQ--KCYSCGEF----GHI---QKDCTKVKCYRCGETG 146
CGK ++ + H E+ KC CG+ H+ ++ T K Y+C E G
Sbjct: 317 KECGKAFNVFSSLNNHKRIHTGEKPYKCEECGKAFNQPSHLATHKRIHTGEKLYKCEECG 376
Query: 147 HVAINCSKTSEVNCYRCGESGHLAREC 173
S + GE + EC
Sbjct: 377 KAFSQSSHITTHKRIHTGEKPYKCEEC 403
Score = 32.0 bits (71), Expect = 0.29
Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 76 CYNCGRG----GHIAKDCKEPKREREQCCYNCGKPGHLARDCD-----HADEQ--KCYSC 124
C CG+ H+ K + R C CGK + + H E+ KC C
Sbjct: 204 CKECGKSFCMLSHLTKHERNHTRVNCYKCEECGKAFSVPSKLNNHKRIHTGEKPYKCEEC 263
Query: 125 GEFGHIQKDCTKVKCYRCGETGHVAINCSKT----SEVNCYR---CGESGHLAREC 173
G+ ++ K GE + C KT S +N ++ GE + +EC
Sbjct: 264 GKAFNVSSSLNNHKRIHTGEKPYKCEECGKTFNMFSSLNNHKRIHTGEKPYKCKEC 319
Score = 31.6 bits (70), Expect = 0.38
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 120 KCYSCGE----FGHIQK---DCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 172
KC CG+ H+ K + T+V CY+C E G SK + GE + E
Sbjct: 203 KCKECGKSFCMLSHLTKHERNHTRVNCYKCEECGKAFSVPSKLNNHKRIHTGEKPYKCEE 262
Query: 173 C 173
C
Sbjct: 263 C 263
Score = 31.2 bits (69), Expect = 0.50
Identities = 39/152 (25%), Positives = 55/152 (36%), Gaps = 33/152 (21%)
Query: 54 CYRCG----ESGHLA--KDCDLQEDVEACYNCGRGGHIAKDCKEPKR----EREQCCYNC 103
C CG +S H+ K E C CG+ ++ KR E+ C C
Sbjct: 372 CEECGKAFSQSSHITTHKRIHTGEKPYKCEECGKAFKVSVHLTTHKRIHTGEKPYKCEEC 431
Query: 104 GKPGHLARDCD-----HADEQ--KCYSCGEFGHIQKDC--------TKVKCYRCGETG-- 146
GK + + H E+ KC CG+ G Q TK K Y+C E G
Sbjct: 432 GKAFNQSSALTTHKIIHTGERPYKCKQCGK-GFSQSSTLTKHKIIHTKEKPYKCEECGKA 490
Query: 147 ---HVAINCSKT--SEVNCYRCGESGHLAREC 173
+ +N K + Y+C E G +C
Sbjct: 491 FNQYSTLNKHKIIHAREKPYKCEECGKAFNKC 522
>gi|169171772 PREDICTED: similar to hCG40110 [Homo sapiens]
Length = 427
Score = 38.1 bits (87), Expect = 0.004
Identities = 43/144 (29%), Positives = 55/144 (38%), Gaps = 33/144 (22%)
Query: 41 RGFQFVS--SSLPDI-----CYRCGESGHLAKDCDLQED---------VEACYNCGRGGH 84
RGFQ S + DI C++C E G KDC L D VE CY C G
Sbjct: 152 RGFQLCSIFTEHKDIFSREKCHKCEECG---KDCRLFSDFTRHKKIHTVERCYKCEECGK 208
Query: 85 IAK---DCKEPKR----EREQCCYNCGKPGHLARDC-----DHADEQ--KCYSCGEFGHI 130
K + E KR E+ C CGK + +H ++ KC CG+
Sbjct: 209 EFKKFSNLTEHKRVHTGEKPYKCEGCGKTFTCSSTLVKHKRNHTGDRPYKCEECGKAFKC 268
Query: 131 QKDCTKVKCYRCGETGHVAINCSK 154
D T K GE + C+K
Sbjct: 269 FSDLTNHKRIHTGEKPYKCEECNK 292
Score = 34.7 bits (78), Expect = 0.045
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 18/102 (17%)
Query: 76 CYNCGRGGHIAKDCKEPKR--EREQC--CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 131
C CGRG + E K RE+C C CGK C +F +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKD--------------CRLFSDFTRHK 192
Query: 132 KDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
K T +CY+C E G S +E GE + C
Sbjct: 193 KIHTVERCYKCEECGKEFKKFSNLTEHKRVHTGEKPYKCEGC 234
Score = 33.1 bits (74), Expect = 0.13
Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 19/109 (17%)
Query: 54 CYRCGESGHLA------KDCDLQEDVEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKP 106
C +CG L KD +E C CG+ + D + K + CY C +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKDCRLFSDFTRHKKIHTVERCYKCEEC 206
Query: 107 GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKT 155
G + + E K GE KC CG+T CS T
Sbjct: 207 GKEFKKFSNLTEHKRVHTGE--------KPYKCEGCGKT----FTCSST 243
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.478
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,980,119
Number of Sequences: 37866
Number of extensions: 504621
Number of successful extensions: 4836
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 482
Number of HSP's that attempted gapping in prelim test: 2306
Number of HSP's gapped (non-prelim): 2062
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.