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Search of human proteins with 113411617
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113411617 PREDICTED: hypothetical protein [Homo sapiens]
(189 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169162343 PREDICTED: hypothetical protein [Homo sapiens] 380 e-106
gi|113411617 PREDICTED: hypothetical protein [Homo sapiens] 380 e-106
gi|239747570 PREDICTED: hypothetical protein [Homo sapiens] 103 7e-23
gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo ... 46 2e-05
gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo ... 46 2e-05
gi|239757099 PREDICTED: hypothetical protein [Homo sapiens] 45 3e-05
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|18959210 WIRE protein [Homo sapiens] 40 0.001
gi|169201198 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|169188531 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239755684 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|239750147 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|239744457 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens] 38 0.006
gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens] 38 0.006
gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens] 38 0.006
gi|169213703 PREDICTED: hypothetical protein [Homo sapiens] 36 0.017
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 36 0.017
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 36 0.017
gi|197276594 RNA binding motif protein 20 [Homo sapiens] 36 0.023
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 35 0.029
gi|239752392 PREDICTED: hypothetical protein XP_002348220 [Homo ... 35 0.050
gi|239746909 PREDICTED: hypothetical protein XP_002343871 [Homo ... 35 0.050
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens] 34 0.066
gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens] 34 0.066
gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens] 34 0.066
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ... 34 0.066
>gi|169162343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 380 bits (975), Expect = e-106
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAG 60
MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAG
Sbjct: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAG 60
Query: 61 SGRASRRRAVRRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFA 120
SGRASRRRAVRRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFA
Sbjct: 61 SGRASRRRAVRRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFA 120
Query: 121 ASPSAPWSLGSVRSLERGAAREQAACGRPAPLALVQEAPGAAERAREARSEQPTSPGTRH 180
ASPSAPWSLGSVRSLERGAAREQAACGRPAPLALVQEAPGAAERAREARSEQPTSPGTRH
Sbjct: 121 ASPSAPWSLGSVRSLERGAAREQAACGRPAPLALVQEAPGAAERAREARSEQPTSPGTRH 180
Query: 181 VGCCSRASS 189
VGCCSRASS
Sbjct: 181 VGCCSRASS 189
>gi|113411617 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 380 bits (975), Expect = e-106
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAG 60
MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAG
Sbjct: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAG 60
Query: 61 SGRASRRRAVRRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFA 120
SGRASRRRAVRRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFA
Sbjct: 61 SGRASRRRAVRRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFA 120
Query: 121 ASPSAPWSLGSVRSLERGAAREQAACGRPAPLALVQEAPGAAERAREARSEQPTSPGTRH 180
ASPSAPWSLGSVRSLERGAAREQAACGRPAPLALVQEAPGAAERAREARSEQPTSPGTRH
Sbjct: 121 ASPSAPWSLGSVRSLERGAAREQAACGRPAPLALVQEAPGAAERAREARSEQPTSPGTRH 180
Query: 181 VGCCSRASS 189
VGCCSRASS
Sbjct: 181 VGCCSRASS 189
>gi|239747570 PREDICTED: hypothetical protein [Homo sapiens]
Length = 128
Score = 103 bits (258), Expect = 7e-23
Identities = 59/72 (81%), Positives = 60/72 (83%), Gaps = 4/72 (5%)
Query: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAG-CLPVQA 59
MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLE G CL Q
Sbjct: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQ- 59
Query: 60 GSGRASRRRAVR 71
G A RR AV+
Sbjct: 60 --GLAERRVAVQ 69
>gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo
sapiens]
Length = 208
Score = 46.2 bits (108), Expect = 2e-05
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 13 RGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSGRASRRRAV-- 70
R +R+ G GE GP +S RPA R A + R PA+ P + + A R +
Sbjct: 60 RAHTRRKALGPGER--GPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPT 117
Query: 71 --RRVSGRWLPLSRPLLPL-LSHPGWPDSASSRTLSAESTPPHPHKLVLAPFAASPSAPW 127
RR S P+S P PL S PG P+++ R + + VLA A P++P
Sbjct: 118 NGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRQVLATGPAQPTSP- 176
Query: 128 SLGSVRSLERGAAREQAACG 147
V + RGA RE+++ G
Sbjct: 177 --RLVSAWSRGARRERSSRG 194
>gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo
sapiens]
Length = 208
Score = 46.2 bits (108), Expect = 2e-05
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 13 RGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSGRASRRRAV-- 70
R +R+ G GE GP +S RPA R A + R PA+ P + + A R +
Sbjct: 60 RAHTRRKALGPGER--GPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPT 117
Query: 71 --RRVSGRWLPLSRPLLPL-LSHPGWPDSASSRTLSAESTPPHPHKLVLAPFAASPSAPW 127
RR S P+S P PL S PG P+++ R + + VLA A P++P
Sbjct: 118 NGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRQVLATGPAQPTSP- 176
Query: 128 SLGSVRSLERGAAREQAACG 147
V + RGA RE+++ G
Sbjct: 177 --RLVSAWSRGARRERSSRG 194
>gi|239757099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 45.4 bits (106), Expect = 3e-05
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 13 RGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSGRASRRRAV-- 70
R +R+ G GE GP +S RPA R A + R PA+ P + + A R +
Sbjct: 60 RAHTRRKALGPGER--GPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPT 117
Query: 71 --RRVSGRWLPLSRPLLPL-LSHPGWPDSASSRTLSAESTPPHPHKLVLAPFAASPSAPW 127
RR S P+S P PL S PG P+++ R + + VLA A P++P
Sbjct: 118 NGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSP- 176
Query: 128 SLGSVRSLERGAAREQAACG 147
V + RGA RE+++ G
Sbjct: 177 --RLVFAWSRGARRERSSRG 194
>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 44.7 bits (104), Expect = 5e-05
Identities = 61/186 (32%), Positives = 70/186 (37%), Gaps = 33/186 (17%)
Query: 2 ASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLE------PAAGCL 55
A G GGE R G + R GK G P S+ RP A + LR E P
Sbjct: 100 ARGQTTGGEGREGAQTREGK-----MGLPDSARRPR---APRTPLRPERPAPGVPGGRVA 151
Query: 56 PVQAGSGRASRRRAVRRVSGRWLPLS-RPLLPLLSHPGWPDSAS-----SRTLSAESTPP 109
P SG S R RVSGR P P LL + P AS + TL+ E
Sbjct: 152 PCTCTSGSPSPRPRRLRVSGRGSPAQLPPTYQLLGYHRAPPRASPGGWNTETLNTEDARR 211
Query: 110 HPHKLVLAPFAASPSAPWSLGSVRSLERGAAREQAACGRP---APLALVQEA---PGAAE 163
AP P +L RS R A A GR LAL +E+ GA E
Sbjct: 212 RARSATQAP-------PLALVPARSRARPAHLRVRAAGRSRHRVLLALSRESRHLSGARE 264
Query: 164 RAREAR 169
R R R
Sbjct: 265 RGRAGR 270
>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 44.7 bits (104), Expect = 5e-05
Identities = 61/186 (32%), Positives = 70/186 (37%), Gaps = 33/186 (17%)
Query: 2 ASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLE------PAAGCL 55
A G GGE R G + R GK G P S+ RP A + LR E P
Sbjct: 100 ARGQTTGGEGREGAQTREGK-----MGLPDSARRPR---APRTPLRPERPAPGVPGGRVA 151
Query: 56 PVQAGSGRASRRRAVRRVSGRWLPLS-RPLLPLLSHPGWPDSAS-----SRTLSAESTPP 109
P SG S R RVSGR P P LL + P AS + TL+ E
Sbjct: 152 PCTCTSGSPSPRPRRLRVSGRGSPAQLPPTYQLLGYHRAPPRASPGGWNTETLNTEDARR 211
Query: 110 HPHKLVLAPFAASPSAPWSLGSVRSLERGAAREQAACGRP---APLALVQEA---PGAAE 163
AP P +L RS R A A GR LAL +E+ GA E
Sbjct: 212 RARSATQAP-------PLALVPARSRARPAHLRVRAAGRSRHRVLLALSRESRHLSGARE 264
Query: 164 RAREAR 169
R R R
Sbjct: 265 RGRAGR 270
>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 44.7 bits (104), Expect = 5e-05
Identities = 61/186 (32%), Positives = 70/186 (37%), Gaps = 33/186 (17%)
Query: 2 ASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLE------PAAGCL 55
A G GGE R G + R GK G P S+ RP A + LR E P
Sbjct: 100 ARGQTTGGEGREGAQTREGK-----MGLPDSARRPR---APRTPLRPERPAPGVPGGRVA 151
Query: 56 PVQAGSGRASRRRAVRRVSGRWLPLS-RPLLPLLSHPGWPDSAS-----SRTLSAESTPP 109
P SG S R RVSGR P P LL + P AS + TL+ E
Sbjct: 152 PCTCTSGSPSPRPRRLRVSGRGSPAQLPPTYQLLGYHRAPPRASPGGWNTETLNTEDARR 211
Query: 110 HPHKLVLAPFAASPSAPWSLGSVRSLERGAAREQAACGRP---APLALVQEA---PGAAE 163
AP P +L RS R A A GR LAL +E+ GA E
Sbjct: 212 RARSATQAP-------PLALVPARSRARPAHLRVRAAGRSRHRVLLALSRESRHLSGARE 264
Query: 164 RAREAR 169
R R R
Sbjct: 265 RGRAGR 270
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 40.4 bits (93), Expect = 0.001
Identities = 52/173 (30%), Positives = 63/173 (36%), Gaps = 32/173 (18%)
Query: 11 RRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSA-LRLEPAAGCLPVQAGSGRASRRRA 69
R R RR G A+G P R AA SA R PA P G+ + RA
Sbjct: 110 RGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGGTSLGAGSRA 169
Query: 70 VRRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFAASPSAP--W 127
+RR LP S +SSR +A P P P AP W
Sbjct: 170 LRRPGSAALPRS--------------PSSSRRWAAMPGPGAPR----------PGAPGTW 205
Query: 128 SLGSVRSLERGAAREQAACGRPAPLALVQEAPGAAERAREARSEQPTSPGTRH 180
+G + AA A P P A V AP AA R A + +PGT +
Sbjct: 206 PVGFAVAAPPAAAASVA----PPPPA-VAGAPAAAFRGWVAAPDPGCTPGTEN 253
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 40.4 bits (93), Expect = 0.001
Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 24 GEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSGRASRRRAVRRVSGRWLP-LSR 82
G G + +PAL++ + A P PV A SGR R S LP + R
Sbjct: 99 GAKDGSENLAGKPALQIPSSRAAAPRP-----PVSAASGRPQDDTDSSRASLPELPRMQR 153
Query: 83 PLLPLLSHPGWPDSASSRTLSAESTPPHPHKLVLAP 118
P LP LS P S + S+ PP P + AP
Sbjct: 154 PSLPDLSRPNTTSSTGMKHSSSAPPPPPPGRRANAP 189
>gi|169201198 PREDICTED: hypothetical protein [Homo sapiens]
Length = 105
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/85 (32%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Query: 96 SASSRTLSAESTPPHPHKLVLAPFAASPSAPWSLGSVRSLERGAAREQAACGRPAPLALV 155
S SR LS PP P L+L P P G ER A P PL L
Sbjct: 7 SRRSRALSLPLPPPPPPPLLLEPLPLLEEPP---GLQHVSERAGPAAPAPSTHPTPLPLP 63
Query: 156 QEAPGAAERAREARSEQPTSPGTRH 180
+ PGA+ +A A + T P H
Sbjct: 64 KPTPGASRQAPAANPGKGTPPSGLH 88
>gi|169188531 PREDICTED: hypothetical protein [Homo sapiens]
Length = 105
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/85 (32%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Query: 96 SASSRTLSAESTPPHPHKLVLAPFAASPSAPWSLGSVRSLERGAAREQAACGRPAPLALV 155
S SR LS PP P L+L P P G ER A P PL L
Sbjct: 7 SRRSRALSLPLPPPPPPPLLLEPLPLLEEPP---GLQHVSERAGPAAPAPSTHPTPLPLP 63
Query: 156 QEAPGAAERAREARSEQPTSPGTRH 180
+ PGA+ +A A + T P H
Sbjct: 64 KPTPGASRQAPAANPGKGTPPSGLH 88
>gi|239755684 PREDICTED: hypothetical protein [Homo sapiens]
Length = 415
Score = 38.1 bits (87), Expect = 0.005
Identities = 54/183 (29%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 8 GGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPV-QAGSGRASR 66
G RR G +RR E+ P S RP RL+ L PA C+ V QA S A
Sbjct: 236 GSTRRSGYSRRR-----ESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGL 290
Query: 67 RRAV-RRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAES----TPPH----------- 110
R++ +GR +R L L HP P + R ++S PP
Sbjct: 291 SRSLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFP 350
Query: 111 ---PHKLVLAPFAAS-------PSAPWSLGSVR--SLERGAAREQAACGRPAPLALVQEA 158
P + LA AA+ P+AP S G++R + RG + A R A A
Sbjct: 351 LALPLRAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRA 410
Query: 159 PGA 161
P A
Sbjct: 411 PRA 413
>gi|239750147 PREDICTED: hypothetical protein [Homo sapiens]
Length = 415
Score = 38.1 bits (87), Expect = 0.005
Identities = 54/183 (29%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 8 GGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPV-QAGSGRASR 66
G RR G +RR E+ P S RP RL+ L PA C+ V QA S A
Sbjct: 236 GSTRRSGYSRRR-----ESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGL 290
Query: 67 RRAV-RRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAES----TPPH----------- 110
R++ +GR +R L L HP P + R ++S PP
Sbjct: 291 SRSLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFP 350
Query: 111 ---PHKLVLAPFAAS-------PSAPWSLGSVR--SLERGAAREQAACGRPAPLALVQEA 158
P + LA AA+ P+AP S G++R + RG + A R A A
Sbjct: 351 LALPLRAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRA 410
Query: 159 PGA 161
P A
Sbjct: 411 PRA 413
>gi|239744457 PREDICTED: hypothetical protein [Homo sapiens]
Length = 351
Score = 38.1 bits (87), Expect = 0.005
Identities = 54/183 (29%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 8 GGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPV-QAGSGRASR 66
G RR G +RR E+ P S RP RL+ L PA C+ V QA S A
Sbjct: 172 GSTRRSGYSRRR-----ESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGL 226
Query: 67 RRAV-RRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAES----TPPH----------- 110
R++ +GR +R L L HP P + R ++S PP
Sbjct: 227 SRSLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFP 286
Query: 111 ---PHKLVLAPFAAS-------PSAPWSLGSVR--SLERGAAREQAACGRPAPLALVQEA 158
P + LA AA+ P+AP S G++R + RG + A R A A
Sbjct: 287 LALPLRAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRA 346
Query: 159 PGA 161
P A
Sbjct: 347 PRA 349
>gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 37.7 bits (86), Expect = 0.006
Identities = 41/139 (29%), Positives = 53/139 (38%), Gaps = 16/139 (11%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSG 62
+G G G RR G EKR R E GGP SSR L+ +PA + +G
Sbjct: 144 AGGGSGDRRRAGPEKRPKSSR-EGSGGPQESSRDKRPLSGPDVGTPQPAGLASGAKLAAG 202
Query: 63 -------RASRRRAVRRVSG--RWLPLSRPLLPLLSHPGWPDSASSRTLSAESTP----- 108
RA R G + + P L+ P S+S A P
Sbjct: 203 RPFNTYPRADTDHPSRGAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVL 262
Query: 109 -PHPHKLVLAPFAASPSAP 126
PH + LAP A +P+AP
Sbjct: 263 GPHASEPQLAPPACTPAAP 281
>gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 37.7 bits (86), Expect = 0.006
Identities = 41/139 (29%), Positives = 53/139 (38%), Gaps = 16/139 (11%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSG 62
+G G G RR G EKR R E GGP SSR L+ +PA + +G
Sbjct: 144 AGGGSGDRRRAGPEKRPKSSR-EGSGGPQESSRDKRPLSGPDVGTPQPAGLASGAKLAAG 202
Query: 63 -------RASRRRAVRRVSG--RWLPLSRPLLPLLSHPGWPDSASSRTLSAESTP----- 108
RA R G + + P L+ P S+S A P
Sbjct: 203 RPFNTYPRADTDHPSRGAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVL 262
Query: 109 -PHPHKLVLAPFAASPSAP 126
PH + LAP A +P+AP
Sbjct: 263 GPHASEPQLAPPACTPAAP 281
>gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 37.7 bits (86), Expect = 0.006
Identities = 41/139 (29%), Positives = 53/139 (38%), Gaps = 16/139 (11%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSG 62
+G G G RR G EKR R E GGP SSR L+ +PA + +G
Sbjct: 144 AGGGSGDRRRAGPEKRPKSSR-EGSGGPQESSRDKRPLSGPDVGTPQPAGLASGAKLAAG 202
Query: 63 -------RASRRRAVRRVSG--RWLPLSRPLLPLLSHPGWPDSASSRTLSAESTP----- 108
RA R G + + P L+ P S+S A P
Sbjct: 203 RPFNTYPRADTDHPSRGAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVL 262
Query: 109 -PHPHKLVLAPFAASPSAP 126
PH + LAP A +P+AP
Sbjct: 263 GPHASEPQLAPPACTPAAP 281
>gi|169213703 PREDICTED: hypothetical protein [Homo sapiens]
Length = 319
Score = 36.2 bits (82), Expect = 0.017
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 91 PGWPDSASSRTLSAE-STPPHPHKLVLAPFAASPSAPWSLGSVRSLERGAAREQA----- 144
P P S+ LSA+ +P PH PFA S P +LG+ + R ++ A
Sbjct: 94 PSTPHLLSASALSAQLDSPARPHPRCYPPFALSAPRPPALGASATAFRSSSDPPARPRLF 153
Query: 145 --ACGRPAPLALVQEAPGAAERAREARSEQPTSPGTRHVGCCSRASS 189
A PA L L A+ + + R P+SPG C S + S
Sbjct: 154 RRASASPAQLRLPSRL--ASALSAQLRLPHPSSPGVLPWRCLSLSVS 198
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 36.2 bits (82), Expect = 0.017
Identities = 49/169 (28%), Positives = 61/169 (36%), Gaps = 15/169 (8%)
Query: 14 GEEKRRGKGRGEAKGGPGSSSRPA--LRLAADSALRLEPAAGCLPVQAGSGRASRRRAVR 71
GE + R +G G+ G GS + A R A D+ R + G R + R VR
Sbjct: 756 GESRDRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVR 815
Query: 72 RVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFAASPSAPWSLGS 131
R SGR + + G A+SR ES P P P SP+A S
Sbjct: 816 RESGRRRAGA-------TSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARG 868
Query: 132 VRSLERGAAREQAACGRPAPLALVQEAPGAAERAREARSEQPTSPGTRH 180
L A+R A R P Q P A R R PG H
Sbjct: 869 SWGLR--ASRPSRAAPRGPP--NFQRCP--APRPRRRLGVSIVGPGRAH 911
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 36.2 bits (82), Expect = 0.017
Identities = 47/177 (26%), Positives = 63/177 (35%), Gaps = 23/177 (12%)
Query: 15 EEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSGRASRRRAVRRVS 74
EE+ K EA P ++ PAL + L P G P S + +R A R S
Sbjct: 428 EEEEEDKEE-EAPAAPSLATSPALGHPESTPKSLHPWYGITPTS--SPKTKKRPAPRAPS 484
Query: 75 GRWLPLSRPLLPLLSHPGWPDSASSRTLSAEST---------------PPHPHKLVLAPF 119
L L L SH P + S LS ES PP K P
Sbjct: 485 ASPLALHASRL---SHSEPPSATPSPALSVESLSSESASQTAGAELLEPPAVPKSSSEPA 541
Query: 120 AASPSAPWSLGSVRSLERGAAREQAACGRPAPLALVQEAPGAAERAREARSEQPTSP 176
+P P + S+ + A+ + P + Q +PG A R R + QP P
Sbjct: 542 VHAPGTPGNPVSLSTNSSLASSGELV--EPRVEQMPQASPGLAPRTRGSSGPQPAKP 596
>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
Length = 1227
Score = 35.8 bits (81), Expect = 0.023
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 105 ESTPPHPHKLVLAPFAASPSAPWSLGSVRSLERGAAREQAACGRPAPLALVQEAPGAAER 164
E PH K P + SP+ P S+ S +S E G R++ L Q+APG + R
Sbjct: 728 EGGRPHREKY---PRSGSPNLPHSVSSYKSREDGYYRKEPKAKWDKYLKQQQDAPGRSRR 784
Query: 165 AREARSEQPTSP 176
EAR + P
Sbjct: 785 KDEARLRESRHP 796
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 35.4 bits (80), Expect = 0.029
Identities = 25/74 (33%), Positives = 33/74 (44%)
Query: 12 RRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSGRASRRRAVR 71
R G + +G E GGP + S P+ +LA +A P +G V +G G S R
Sbjct: 475 RHGPGRPKGSRNKEGTGGPAAPSLPSAQLAGFTATAASPFSGGSLVSSGLGGLSSRTFGP 534
Query: 72 RVSGRWLPLSRPLL 85
S L L PLL
Sbjct: 535 SGSLPSLSLESPLL 548
>gi|239752392 PREDICTED: hypothetical protein XP_002348220 [Homo
sapiens]
Length = 189
Score = 34.7 bits (78), Expect = 0.050
Identities = 33/103 (32%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQA-GS 61
+GA ++G GRG A+GG SR R A E P +
Sbjct: 52 AGAWHSESSQKGTACPLALGRGGARGGGQRKSRSGARAPGQPA---EAGLSASPEKTRPE 108
Query: 62 GRASRRRAV--RRVSGRWLPLSRPL-LPLLSHPGWPDSASSRT 101
GRA R RAV + RWL +RP P + PG SRT
Sbjct: 109 GRAERGRAVVWQSQPNRWLQTARPTHAPAPARPGRQSKRRSRT 151
>gi|239746909 PREDICTED: hypothetical protein XP_002343871 [Homo
sapiens]
Length = 189
Score = 34.7 bits (78), Expect = 0.050
Identities = 33/103 (32%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQA-GS 61
+GA ++G GRG A+GG SR R A E P +
Sbjct: 52 AGAWHSESSQKGTACPLALGRGGARGGGQRKSRSGARAPGQPA---EAGLSASPEKTRPE 108
Query: 62 GRASRRRAV--RRVSGRWLPLSRPL-LPLLSHPGWPDSASSRT 101
GRA R RAV + RWL +RP P + PG SRT
Sbjct: 109 GRAERGRAVVWQSQPNRWLQTARPTHAPAPARPGRQSKRRSRT 151
>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 34.3 bits (77), Expect = 0.066
Identities = 49/165 (29%), Positives = 64/165 (38%), Gaps = 28/165 (16%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSG 62
+G G G RG E+RRG + GP + +R R A SA +PA+G A
Sbjct: 78 AGCGAHGPGSRGRERRRGSR--DPPAGPVARARARGRSAPGSA---QPASG-----AAGP 127
Query: 63 RASRRRAVRRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFAAS 122
A+ A LP SR L S P P + A + P P L +AP A
Sbjct: 128 AAAPEAAPPAWDPATLPPSRKRNSLGSSPLHP--VRLGRVRAHAGPAGPSILRVAPHPAL 185
Query: 123 PSAP--------WSLGSVRSLER-----GAAREQAACGR---PAP 151
P A W+ +SL+ G R + GR PAP
Sbjct: 186 PGAQVHWAGRHRWAARRGKSLQSAWWGPGGRRNSISPGRTTFPAP 230
>gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2852
Score = 34.3 bits (77), Expect = 0.066
Identities = 42/165 (25%), Positives = 58/165 (35%), Gaps = 20/165 (12%)
Query: 30 PGSSSRPALRLAADSALRLEPAAGCL---PVQAGSGRASRRRAVRRVSGRWLPLSRPLLP 86
P ++ P L A + R + G + P +GS +A AV +V
Sbjct: 1568 PVRTTPPQPSLTASPSSRPVASPGAISRSPTSSGSHKAVLTPAVTKV------------- 1614
Query: 87 LLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFAASPSAPWSLGSVRSLERGAAREQAAC 146
+S G P +++ S+ STP SP A SL V S E+G A
Sbjct: 1615 -ISRTGVPQPTQAQSASSPSTPLTVAGTAAEQVPVSPLATRSLEIVLSTEKGEAGHSQPM 1673
Query: 147 GRPA---PLALVQEAPGAAERAREARSEQPTSPGTRHVGCCSRAS 188
G PA P L P A+ A P T S A+
Sbjct: 1674 GSPASPQPHPLPSAPPRPAQHTTMATRSPALPPETPAAASLSTAT 1718
>gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2924
Score = 34.3 bits (77), Expect = 0.066
Identities = 42/165 (25%), Positives = 58/165 (35%), Gaps = 20/165 (12%)
Query: 30 PGSSSRPALRLAADSALRLEPAAGCL---PVQAGSGRASRRRAVRRVSGRWLPLSRPLLP 86
P ++ P L A + R + G + P +GS +A AV +V
Sbjct: 1640 PVRTTPPQPSLTASPSSRPVASPGAISRSPTSSGSHKAVLTPAVTKV------------- 1686
Query: 87 LLSHPGWPDSASSRTLSAESTPPHPHKLVLAPFAASPSAPWSLGSVRSLERGAAREQAAC 146
+S G P +++ S+ STP SP A SL V S E+G A
Sbjct: 1687 -ISRTGVPQPTQAQSASSPSTPLTVAGTAAEQVPVSPLATRSLEIVLSTEKGEAGHSQPM 1745
Query: 147 GRPA---PLALVQEAPGAAERAREARSEQPTSPGTRHVGCCSRAS 188
G PA P L P A+ A P T S A+
Sbjct: 1746 GSPASPQPHPLPSAPPRPAQHTTMATRSPALPPETPAAASLSTAT 1790
>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 34.3 bits (77), Expect = 0.066
Identities = 32/116 (27%), Positives = 44/116 (37%), Gaps = 20/116 (17%)
Query: 35 RPALRLAADSALRLEPAAGCLPVQAGSGRASRRRAVRRVSGRWLPLSRPLLPLLSHPGWP 94
RPA LA + + AG P + G A+ + +W+P PL HP P
Sbjct: 186 RPAGHLACGAGIWTRAQAG--PHKRAVGAAAGAAQSSGLFSKWVPCQ----PLSQHPTGP 239
Query: 95 DSASSRTLSAESTPPHPHKLVLAPFAASPSAPWSLGSVRSLERGAAREQAACGRPA 150
+ +S PH L A ASP W G ++ +GA Q G A
Sbjct: 240 EPSS-----------RPHALSTA---ASPRPCWGAGHSQTWRQGAGEAQGTRGGSA 281
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,851,645
Number of Sequences: 37866
Number of extensions: 465022
Number of successful extensions: 3191
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 349
Number of HSP's that attempted gapping in prelim test: 2885
Number of HSP's gapped (non-prelim): 611
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.