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Search of human proteins with 113411424
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113411424 PREDICTED: hypothetical protein [Homo sapiens]
(274 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113411424 PREDICTED: hypothetical protein [Homo sapiens] 576 e-165
gi|239741271 PREDICTED: hypothetical protein [Homo sapiens] 563 e-161
gi|134031945 SCO-spondin [Homo sapiens] 37 0.014
gi|8393264 delta-like 3 protein isoform 1 precursor [Homo sapiens] 37 0.019
gi|45243561 delta-like 3 protein isoform 2 precursor [Homo sapiens] 37 0.019
gi|47271475 SPOC domain containing 1 [Homo sapiens] 37 0.024
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 36 0.041
gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens] 35 0.071
gi|169206277 PREDICTED: hypothetical protein [Homo sapiens] 34 0.16
gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo ... 34 0.16
gi|169206560 PREDICTED: hypothetical protein [Homo sapiens] 33 0.21
gi|169205714 PREDICTED: hypothetical protein [Homo sapiens] 33 0.21
gi|110832843 TBP-associated factor 4 [Homo sapiens] 33 0.21
gi|169213067 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27
gi|239754263 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27
gi|239748801 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27
gi|239742838 PREDICTED: hypothetical protein XP_002342658 [Homo ... 33 0.27
gi|239740892 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27
gi|239740821 PREDICTED: hypothetical protein XP_002344064 [Homo ... 33 0.27
gi|239740718 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27
gi|239740668 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27
gi|239513934 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 33 0.27
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 33 0.27
gi|239756943 PREDICTED: hypothetical protein [Homo sapiens] 32 0.46
gi|239751443 PREDICTED: hypothetical protein [Homo sapiens] 32 0.46
gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo ... 32 0.46
gi|169215350 PREDICTED: hypothetical protein [Homo sapiens] 32 0.60
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 32 0.60
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 32 0.60
>gi|113411424 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 576 bits (1485), Expect = e-165
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MDPTIPVLPQTGNQLGGPPSWTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRR 60
MDPTIPVLPQTGNQLGGPPSWTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRR
Sbjct: 1 MDPTIPVLPQTGNQLGGPPSWTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRR 60
Query: 61 PPVSCDLPVLLSAEARPGAPEAGSIPVAWRQLQPPQTAARWRRAGAREQAGPGRGWRDSA 120
PPVSCDLPVLLSAEARPGAPEAGSIPVAWRQLQPPQTAARWRRAGAREQAGPGRGWRDSA
Sbjct: 61 PPVSCDLPVLLSAEARPGAPEAGSIPVAWRQLQPPQTAARWRRAGAREQAGPGRGWRDSA 120
Query: 121 TRLGRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRANGTRTATPCSLPSACRR 180
TRLGRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRANGTRTATPCSLPSACRR
Sbjct: 121 TRLGRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRANGTRTATPCSLPSACRR 180
Query: 181 CCPPTPTAHFSLLQAPGMQIISHWVLAGARSCGEARARQLSPQLGPRALAAAAPRYGRRL 240
CCPPTPTAHFSLLQAPGMQIISHWVLAGARSCGEARARQLSPQLGPRALAAAAPRYGRRL
Sbjct: 181 CCPPTPTAHFSLLQAPGMQIISHWVLAGARSCGEARARQLSPQLGPRALAAAAPRYGRRL 240
Query: 241 QYAHAATVWCQGPAVGHARSATPHPIIYGSNQII 274
QYAHAATVWCQGPAVGHARSATPHPIIYGSNQII
Sbjct: 241 QYAHAATVWCQGPAVGHARSATPHPIIYGSNQII 274
>gi|239741271 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 563 bits (1451), Expect = e-161
Identities = 269/274 (98%), Positives = 269/274 (98%)
Query: 1 MDPTIPVLPQTGNQLGGPPSWTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRR 60
MDPTIPVLPQTGNQLGGPPSWTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRR
Sbjct: 1 MDPTIPVLPQTGNQLGGPPSWTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRR 60
Query: 61 PPVSCDLPVLLSAEARPGAPEAGSIPVAWRQLQPPQTAARWRRAGAREQAGPGRGWRDSA 120
PPVSCDLPVLLSAEA PGAPEAGSIPVAWRQLQPPQTAARWR AGAREQAGPGRGWRDSA
Sbjct: 61 PPVSCDLPVLLSAEAWPGAPEAGSIPVAWRQLQPPQTAARWRHAGAREQAGPGRGWRDSA 120
Query: 121 TRLGRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRANGTRTATPCSLPSACRR 180
TR GRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRANGTRTATPCSLPSACRR
Sbjct: 121 TRPGRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRANGTRTATPCSLPSACRR 180
Query: 181 CCPPTPTAHFSLLQAPGMQIISHWVLAGARSCGEARARQLSPQLGPRALAAAAPRYGRRL 240
CCPPTPTAHFSLLQAPGMQIISHWVLAGARSCGEARARQLSPQLGPRALAAAAPRYGRRL
Sbjct: 181 CCPPTPTAHFSLLQAPGMQIISHWVLAGARSCGEARARQLSPQLGPRALAAAAPRYGRRL 240
Query: 241 QYAHAATVWCQGPAVGHARSATPHPIIYGSNQII 274
QYAHAATVW QGPA GHARSATPHPIIYGSNQII
Sbjct: 241 QYAHAATVWLQGPAAGHARSATPHPIIYGSNQII 274
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 37.4 bits (85), Expect = 0.014
Identities = 52/192 (27%), Positives = 66/192 (34%), Gaps = 19/192 (9%)
Query: 7 VLPQTGNQLG-GPPSWTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRRPPVSC 65
V P TG G GP S + S T P R R RL L L Q RP C
Sbjct: 3873 VEPVTGLPGGWGPWSSWSPCSRSCTDPARPAWRSRTRLCLANCTMGDPL---QERP---C 3926
Query: 66 DLPVLLSAEARPGAPEAGSIPVAWRQLQPPQTAAR------WRRAGAREQAGPGRGWRDS 119
+LP PG P G+ +W P + +R RR A GPG W +
Sbjct: 3927 NLPSCTELPVCPG-PGCGAGNCSWTSWAPWEPCSRSCGVGQQRRLRAYRPPGPGGHWCPN 3985
Query: 120 ATRLGRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRAN-----GTRTATPCSL 174
+ R + R +P G+ P D GG+ L + PC+
Sbjct: 3986 ILTAYQERRFCNLRACPVPGGWSRWSPWSWCDRSCGGGQSLRSRSCSSPPSKNGGAPCAG 4045
Query: 175 PSACRRCCPPTP 186
R C P P
Sbjct: 4046 ERHQARLCNPMP 4057
>gi|8393264 delta-like 3 protein isoform 1 precursor [Homo sapiens]
Length = 618
Score = 37.0 bits (84), Expect = 0.019
Identities = 54/194 (27%), Positives = 58/194 (29%), Gaps = 55/194 (28%)
Query: 33 PLPPCRRRL--RLLLRQAKKLGRLLGAQRRPPVSCDLPVLLSAEA-----RPGAPEAGSI 85
P PC RL RL R K G A P C L LSA +PGAP A +
Sbjct: 46 PRSPCSARLPCRLFFRVCLKPGLSEEAAESP---CALGAALSARGPVYTEQPGAP-APDL 101
Query: 86 PVAWRQLQPPQTAA----------RWR----------------RAGAREQAGPGRGWRDS 119
P+ LQ P A WR R R + G W
Sbjct: 102 PLPDGLLQVPFRDAWPGTFSFIIETWREELGDQIGGPAWSLLARVAGRRRLAAGGPWARD 161
Query: 120 ATRLGRPRALADYRTSILPPGFHT-----CRPRGNNDVGILGGRPLTRANGTRTATP--- 171
R G YR PP T CRPR P G R P
Sbjct: 162 IQRAGAWELRFSYRARCEPPAVGTACTRLCRPR---------SAPSRCGPGLRPCAPLED 212
Query: 172 -CSLPSACRRCCPP 184
C P CR C P
Sbjct: 213 ECEAPLVCRAGCSP 226
>gi|45243561 delta-like 3 protein isoform 2 precursor [Homo sapiens]
Length = 587
Score = 37.0 bits (84), Expect = 0.019
Identities = 54/194 (27%), Positives = 58/194 (29%), Gaps = 55/194 (28%)
Query: 33 PLPPCRRRL--RLLLRQAKKLGRLLGAQRRPPVSCDLPVLLSAEA-----RPGAPEAGSI 85
P PC RL RL R K G A P C L LSA +PGAP A +
Sbjct: 46 PRSPCSARLPCRLFFRVCLKPGLSEEAAESP---CALGAALSARGPVYTEQPGAP-APDL 101
Query: 86 PVAWRQLQPPQTAA----------RWR----------------RAGAREQAGPGRGWRDS 119
P+ LQ P A WR R R + G W
Sbjct: 102 PLPDGLLQVPFRDAWPGTFSFIIETWREELGDQIGGPAWSLLARVAGRRRLAAGGPWARD 161
Query: 120 ATRLGRPRALADYRTSILPPGFHT-----CRPRGNNDVGILGGRPLTRANGTRTATP--- 171
R G YR PP T CRPR P G R P
Sbjct: 162 IQRAGAWELRFSYRARCEPPAVGTACTRLCRPR---------SAPSRCGPGLRPCAPLED 212
Query: 172 -CSLPSACRRCCPP 184
C P CR C P
Sbjct: 213 ECEAPLVCRAGCSP 226
>gi|47271475 SPOC domain containing 1 [Homo sapiens]
Length = 1216
Score = 36.6 bits (83), Expect = 0.024
Identities = 38/125 (30%), Positives = 46/125 (36%), Gaps = 28/125 (22%)
Query: 56 GAQRRPPVSCDLPVLLSAEARPGAPEAGSI-PVAWRQLQPPQTAARWRRAGAREQAGPGR 114
G RR P LS E PG P S PV P + +WRR GA + G
Sbjct: 176 GCDRRSPT-------LSKEEPPGRPLTSSPDPV------PVRVRKKWRRQGAHSECEEGA 222
Query: 115 G---WRDSATR------LGRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRANG 165
G W D + R +G P +AD + P CRP D G G P G
Sbjct: 223 GDFLWLDQSPRGDNLLSVGDPPQVADLESLGGP-----CRPPSPKDTGSGPGEPGGSGAG 277
Query: 166 TRTAT 170
+ T
Sbjct: 278 CASGT 282
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 35.8 bits (81), Expect = 0.041
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 26 AASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRRPPVSCDLPVLLSAE-ARPGAP-EAG 83
A +P P P P +RR+ LL K RL+ + R + P L A+ PGAP +AG
Sbjct: 60 AEAPGPQPPQPLQRRVLLLC----KTRRLIAERARGRPAAPAPAALVAQPGAPGAPADAG 115
Query: 84 SIPVAWRQLQPPQTAARWRRA-----GAREQA 110
PV ++ P AA A G RE+A
Sbjct: 116 PEPVGTQEPGPDPIAAAVETAPAPDGGPREEA 147
Score = 28.1 bits (61), Expect = 8.6
Identities = 37/137 (27%), Positives = 51/137 (37%), Gaps = 7/137 (5%)
Query: 59 RRPPVSCDLPVLLSAEA-RPGAPEAGSIPVAWRQLQPP--QTAARWRRAGAREQAGPGRG 115
R PPV + V A+A +PG PE P A + L PP T+A + + +G G
Sbjct: 565 RGPPVPLQVQVTYHAQAGQPGPPEPEE-PEADQHLLPPTLPTSATSLASDSTFDSGQGST 623
Query: 116 WRDSATRLGRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRANGTRTATPCSLP 175
+ + L + P C P + + P A TA P LP
Sbjct: 624 VYSDSQSSQQSVMLGSLADAAPSPAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAP-GLP 682
Query: 176 --SACRRCCPPTPTAHF 190
S CPP+ HF
Sbjct: 683 VGSVPAPACPPSLQQHF 699
>gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens]
Length = 2240
Score = 35.0 bits (79), Expect = 0.071
Identities = 46/166 (27%), Positives = 58/166 (34%), Gaps = 39/166 (23%)
Query: 91 QLQPPQTAARWRRAGAREQAGPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNN 150
Q PPQ ++R +E+ GP R+ A G D +++ PP RG
Sbjct: 9 QAPPPQ----FQRMNQQEKPGPAAWPREGA---GGVAGSGDRQSTSSPPA------RGVQ 55
Query: 151 DVGILGGRPLTRANGTRTATP----------------CSLPSACRRCCPPTPTAHFSLLQ 194
+ L GRPL G R TP S P RRC P+ H LQ
Sbjct: 56 TLPRLDGRPLYPQTGGRRLTPTWCWVWGLLHEGEQITASAPHGRRRCLFSAPSTH--RLQ 113
Query: 195 APGMQIISHWVLAGARSCGE---ARARQLSPQLGPRALAAAAPRYG 237
AP W AR+ A R L + P PR G
Sbjct: 114 AP-----ISWRRRDARAANARPGANHRPLLGNVAPPTRGPTGPRPG 154
>gi|169206277 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 33.9 bits (76), Expect = 0.16
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 16/83 (19%)
Query: 21 WTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRRPPVSCDLPVLLSAEA--RPG 78
W G R A P P+ PPC LG RPP C PV EA PG
Sbjct: 78 WIGPRGAFPRPYLFPPC--------AMDTVLGGRSPHLERPPTVCRHPVGRRPEAIQLPG 129
Query: 79 APEAGSIPVAWRQLQPPQTAARW 101
P S L PP+ W
Sbjct: 130 PPSPAS------PLYPPKAPGFW 146
>gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo
sapiens]
Length = 245
Score = 33.9 bits (76), Expect = 0.16
Identities = 37/123 (30%), Positives = 45/123 (36%), Gaps = 29/123 (23%)
Query: 23 GRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRRPP--------------VSCDLP 68
GRR P P P P RR+L L + R+ A+ RPP V
Sbjct: 103 GRRCRPPAPRPRPRPRRKLAL----DQAATRIPAARPRPPGPGGRGSHWKIQPGVQRLPR 158
Query: 69 VLLSAEARPGAPEAGSIPVAWRQLQPPQTAAR-----WRRAGAREQAGPGRGWRDSATRL 123
SA+ RPG PE R +P R WRRA PG G++ S
Sbjct: 159 PTPSAQPRPGPPERR------RASRPLIGCGRGGGGTWRRAADSRWRRPGGGFQRSRREK 212
Query: 124 GRP 126
RP
Sbjct: 213 ARP 215
>gi|169206560 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 33.5 bits (75), Expect = 0.21
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 24/87 (27%)
Query: 21 WTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQ----RRPPVSCDLPVLLSAEA- 75
W G R A P P+ PPC + +LG + RPP C PV EA
Sbjct: 78 WIGPRGAFPRPYLFPPC------------VMDTVLGGRSPHLERPPTVCRHPVGRRPEAI 125
Query: 76 -RPGAPEAGSIPVAWRQLQPPQTAARW 101
PG P S L PP+ W
Sbjct: 126 QLPGPPSPAS------PLYPPKAPGFW 146
>gi|169205714 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 33.5 bits (75), Expect = 0.21
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 24/87 (27%)
Query: 21 WTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQ----RRPPVSCDLPVLLSAEA- 75
W G R A P P+ PPC + +LG + RPP C PV EA
Sbjct: 78 WIGPRGAFPRPYLFPPC------------VMDTVLGGRSPHLERPPTVCRHPVGRRPEAI 125
Query: 76 -RPGAPEAGSIPVAWRQLQPPQTAARW 101
PG P S L PP+ W
Sbjct: 126 QLPGPPSPAS------PLYPPKAPGFW 146
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 33.5 bits (75), Expect = 0.21
Identities = 64/254 (25%), Positives = 78/254 (30%), Gaps = 35/254 (13%)
Query: 3 PTIPVLPQTGNQLGGPPSWTGRRAASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRRPP 62
P P G PP+ R P PP RR + A +L
Sbjct: 75 PAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSA 134
Query: 63 VSCDLPVLLSAEARPGAPEAGSIPVAWRQLQPPQTAARWRRAGAREQAGPGRGWRDSATR 122
SC PV +A G A + P +P AA RAG GPG G +
Sbjct: 135 GSC-APVPAAAAVAAGPEPAPAGPA-----KPAGPAALAARAGPGPGPGPGPGPGPGPGK 188
Query: 123 LGRPRALADYR-TSILPPGFHTCRPR---GNNDVGILGGRPLTRANGTRTATP------- 171
P A ++ L H P NN L P A GT TP
Sbjct: 189 PAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAA 248
Query: 172 -----------CSLPSACRRCCPPTPTAHFSLLQAPGMQIISHWVLAGARSCGEARARQL 220
P+A PP P A +L + PG AG + A
Sbjct: 249 PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHP-------AGPPTAAPAVPPPA 301
Query: 221 SPQLGPRALAAAAP 234
+ Q G A AA AP
Sbjct: 302 AAQNGGSAGAAPAP 315
>gi|169213067 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 33.1 bits (74), Expect = 0.27
Identities = 37/108 (34%), Positives = 41/108 (37%), Gaps = 29/108 (26%)
Query: 17 GPPSWTGRRAASPT-----PHPLPPCR------------------RRLRLLLRQAKKLGR 53
GPP+ GR A SPT P PL P R RR R L R +
Sbjct: 97 GPPNKAGRAAGSPTRVQRRPRPLRPSRAAPRLRGEEPSLLRPQLSRRPRALRRSTRVPAA 156
Query: 54 LLGAQRRPPVSCDLPVLLSA-EARPGAPEAGSIPVAWRQLQPPQTAAR 100
G RR PV P L+ PGA GS R+ Q QT AR
Sbjct: 157 GKGGDRRAPV---FPTLVPLHHGPPGASGVGS--ERDRKFQLHQTPAR 199
>gi|239754263 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 94 PPQTAARWRRAGAREQA--GPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNND 151
PP A R A A + PGRGWR T P A T PG C P G
Sbjct: 209 PPHWATPHRVARAIPEGITSPGRGWRTQKTWTHWP-TRASMGTCPPGPGGKCCMPLG--P 265
Query: 152 VGILGGRPLTRANGTRTATPC 172
G GG+PL G R +PC
Sbjct: 266 PGPPGGKPLAIGPGPR--SPC 284
>gi|239748801 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 94 PPQTAARWRRAGAREQA--GPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNND 151
PP A R A A + PGRGWR T P A T PG C P G
Sbjct: 209 PPHWATPHRVARAIPEGITSPGRGWRTQKTWTHWP-TRASMGTCPPGPGGKCCMPLG--P 265
Query: 152 VGILGGRPLTRANGTRTATPC 172
G GG+PL G R +PC
Sbjct: 266 PGPPGGKPLAIGPGPR--SPC 284
>gi|239742838 PREDICTED: hypothetical protein XP_002342658 [Homo
sapiens]
Length = 295
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 94 PPQTAARWRRAGAREQA--GPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNND 151
PP A R A A + PGRGWR T P A T PG C P G
Sbjct: 209 PPHWATPHRVARAIPEGITSPGRGWRTQKTWTHWP-TRASMGTCPPGPGGKCCMPLG--P 265
Query: 152 VGILGGRPLTRANGTRTATPC 172
G GG+PL G R +PC
Sbjct: 266 PGPPGGKPLAIGPGPR--SPC 284
>gi|239740892 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 94 PPQTAARWRRAGAREQA--GPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNND 151
PP A R A A + PGRGWR T P A T PG C P G
Sbjct: 209 PPHWATPHRVARAIPEGITSPGRGWRTQKTWTHWP-TRASMGTCPPGPGGKCCMPLG--P 265
Query: 152 VGILGGRPLTRANGTRTATPC 172
G GG+PL G R +PC
Sbjct: 266 PGPPGGKPLAIGPGPR--SPC 284
>gi|239740821 PREDICTED: hypothetical protein XP_002344064 [Homo
sapiens]
Length = 295
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 94 PPQTAARWRRAGAREQA--GPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNND 151
PP A R A A + PGRGWR T P A T PG C P G
Sbjct: 209 PPHWATPHRVARAIPEGITSPGRGWRTQKTWTHWP-TRASMGTCPPGPGGKCCMPLG--P 265
Query: 152 VGILGGRPLTRANGTRTATPC 172
G GG+PL G R +PC
Sbjct: 266 PGPPGGKPLAIGPGPR--SPC 284
>gi|239740718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 94 PPQTAARWRRAGAREQA--GPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNND 151
PP A R A A + PGRGWR T P A T PG C P G
Sbjct: 209 PPHWATPHRVARAIPEGITSPGRGWRTQKTWTHWP-TRASMGTCPPGPGGKCCMPLG--P 265
Query: 152 VGILGGRPLTRANGTRTATPC 172
G GG+PL G R +PC
Sbjct: 266 PGPPGGKPLAIGPGPR--SPC 284
>gi|239740668 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 94 PPQTAARWRRAGAREQA--GPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNND 151
PP A R A A + PGRGWR T P A T PG C P G
Sbjct: 209 PPHWATPHRVARAIPEGITSPGRGWRTQKTWTHWP-TRASMGTCPPGPGGKCCMPLG--P 265
Query: 152 VGILGGRPLTRANGTRTATPC 172
G GG+PL G R +PC
Sbjct: 266 PGPPGGKPLAIGPGPR--SPC 284
>gi|239513934 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 33.1 bits (74), Expect = 0.27
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 94 PPQTAARWRRAGAREQA--GPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNND 151
PP A R A A + PGRGWR T P A T PG C P G
Sbjct: 209 PPHWATPHRVARAIPEGITSPGRGWRTQKTWTHWP-TRASMGTCPPGPGGKCCMPLG--P 265
Query: 152 VGILGGRPLTRANGTRTATPC 172
G GG+PL G R +PC
Sbjct: 266 PGPPGGKPLAIGPGPR--SPC 284
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 33.1 bits (74), Expect = 0.27
Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 15 LGGPPSWT---GRRA-ASPTPHPLPPCRRRLRLLLRQAKKLGRLLGAQRRPPVSCDLPVL 70
LGGPP GR A + +P P P R + L LR L G QRR +S PV
Sbjct: 1349 LGGPPETELPEGREADGTGSPSPAPMRRAQSSLCLRDET----LAGGQRRK-LSSRFPVG 1403
Query: 71 LSAEARPGAPEAGSIP-VAWRQLQPPQTAARWRRAGAREQAGPGRGWRDSATRL 123
S+E+ G P +RQ P A GPG GW +SA L
Sbjct: 1404 RSSESF----SPGDTPRQRFRQRHPGPLGAP-----VSHSKGPGVGWENSAETL 1448
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 33.1 bits (74), Expect = 0.27
Identities = 80/298 (26%), Positives = 107/298 (35%), Gaps = 91/298 (30%)
Query: 3 PTIP----------VLPQTGNQLGG--PPSWTGR---------RAASPTPHPLPPCRRRL 41
PTIP LP T GG P W GR A PH LPPC
Sbjct: 1010 PTIPEENGENASNSTLPLTQTPTGGRSPEPW-GRPEFPFGGLETPAMMFPHQLPPCDVPE 1068
Query: 42 RLLLRQAKKLGRLLGAQRRPPVSCDLPV----LLSAEARPG----APEAGSIPVAWRQLQ 93
L + G PP S +P +LS EA G +P G +P
Sbjct: 1069 SLQPKAGLPRG-------LPPTSLQVPAAYPGILSLEAPKGWAGKSPGRGPVPA------ 1115
Query: 94 PPQTAARWRRAGAREQAGPGRGWRDSATRLGRPRALADYRTSILP------PGFHTCRPR 147
PP AA+W+ + G+ R ++ +G P +LP PG H
Sbjct: 1116 PP--AAKWQDRPMQPLVSQGQ-LRHTSQGMGIP---------VLPYPEPAEPGAH----- 1158
Query: 148 GNNDVGILGGRPLTRANGTRTATPCSLP-SACRRCCPPTPTAHFSLLQAPGMQIISHWVL 206
G P T TR P P + R+ P+ H +LQ + ++ L
Sbjct: 1159 ---------GGPSTFGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPL 1209
Query: 207 AGARSCGEARARQLSPQLGPRALAAAAPRYGRRLQYAHAATVWCQGP-AVGHARSATP 263
+ +R SP+L R A PR G LQ A + + Q P AV +R +TP
Sbjct: 1210 S---------SRTGSPELAAR----ARPRPG-LLQQAEMSEITLQPPAAVSFSRKSTP 1253
>gi|239756943 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 32.3 bits (72), Expect = 0.46
Identities = 61/218 (27%), Positives = 76/218 (34%), Gaps = 55/218 (25%)
Query: 77 PGAPEAGSIPVAWRQLQPPQTAAR-WRRAGAREQAGPGRGWRDSATRLGRPRALADYRTS 135
P AP S+ W QLQP R W GA A PG GW D R G + L T
Sbjct: 497 PPAPLQRSV---WGQLQPQAGGGRGWEGRGAGRWARPGPGW-DGGARAG-TQGLPLPGTE 551
Query: 136 ILPPGFHTCRPRG---------NNDVG-ILGGRPLTRANGTRTATPCSLPSACR----RC 181
P RG + VG L R +T G A A R +
Sbjct: 552 AEPGALGCSLSRGPVPRQGSLLSARVGWSLHHRYITSIQGANRAPAALQVRALRLHRNKA 611
Query: 182 CP----PT-----PTAHFSLLQAPGMQ-IISHWVLA---GARSCGEARARQLSPQLGPRA 228
CP PT PT F L++ G+ WV+A A +CG A +
Sbjct: 612 CPALPAPTHLQAEPTRTFRLVREMGVSGPAGVWVVAVDCHAPACGRAHTH-------AHS 664
Query: 229 LAAAAPRYGRRLQYAHAATVWCQGPAVGHARSATPHPI 266
L+ R G WC+G A+ TPH +
Sbjct: 665 LSGLGLRRGN----------WCEGAAL-----RTPHRV 687
>gi|239751443 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 32.3 bits (72), Expect = 0.46
Identities = 61/218 (27%), Positives = 76/218 (34%), Gaps = 55/218 (25%)
Query: 77 PGAPEAGSIPVAWRQLQPPQTAAR-WRRAGAREQAGPGRGWRDSATRLGRPRALADYRTS 135
P AP S+ W QLQP R W GA A PG GW D R G + L T
Sbjct: 497 PPAPLQRSV---WGQLQPQAGGGRGWEGRGAGRWARPGPGW-DGGARAG-TQGLPLPGTE 551
Query: 136 ILPPGFHTCRPRG---------NNDVG-ILGGRPLTRANGTRTATPCSLPSACR----RC 181
P RG + VG L R +T G A A R +
Sbjct: 552 AEPGALGCSLSRGPVPRQGSLLSARVGWSLHHRYITSIQGANRAPAALQVRALRLHRNKA 611
Query: 182 CP----PT-----PTAHFSLLQAPGMQ-IISHWVLA---GARSCGEARARQLSPQLGPRA 228
CP PT PT F L++ G+ WV+A A +CG A +
Sbjct: 612 CPALPAPTHLQAEPTRTFRLVREMGVSGPAGVWVVAVDCHAPACGRAHTH-------AHS 664
Query: 229 LAAAAPRYGRRLQYAHAATVWCQGPAVGHARSATPHPI 266
L+ R G WC+G A+ TPH +
Sbjct: 665 LSGLGLRRGN----------WCEGAAL-----RTPHRV 687
>gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo
sapiens]
Length = 791
Score = 32.3 bits (72), Expect = 0.46
Identities = 61/218 (27%), Positives = 76/218 (34%), Gaps = 55/218 (25%)
Query: 77 PGAPEAGSIPVAWRQLQPPQTAAR-WRRAGAREQAGPGRGWRDSATRLGRPRALADYRTS 135
P AP S+ W QLQP R W GA A PG GW D R G + L T
Sbjct: 505 PPAPLQRSV---WGQLQPQAGGGRGWEGRGAGRWARPGPGW-DGGARAG-TQGLPLPGTE 559
Query: 136 ILPPGFHTCRPRG---------NNDVG-ILGGRPLTRANGTRTATPCSLPSACR----RC 181
P RG + VG L R +T G A A R +
Sbjct: 560 AEPGALGCSLSRGPVPRQGSLLSARVGWSLHHRYITSIQGANRAPAALQVRALRLHRNKA 619
Query: 182 CP----PT-----PTAHFSLLQAPGMQ-IISHWVLA---GARSCGEARARQLSPQLGPRA 228
CP PT PT F L++ G+ WV+A A +CG A +
Sbjct: 620 CPALPAPTHLQAEPTRTFRLVREMGVSGPAGVWVVAVDCHAPACGRAHTH-------AHS 672
Query: 229 LAAAAPRYGRRLQYAHAATVWCQGPAVGHARSATPHPI 266
L+ R G WC+G A+ TPH +
Sbjct: 673 LSGLGLRRGN----------WCEGAAL-----RTPHRV 695
>gi|169215350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 707
Score = 32.0 bits (71), Expect = 0.60
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 21 WTGRRAASPTPHPLPPCR-----RRLRLLLRQAKKLGRLLGAQRRPPVSCDLPVLLSAEA 75
W R +SP P PPCR R++ R + L R+ +PP +C P+L
Sbjct: 492 WAPRHVSSPPPRVQPPCRVSSPPPRVQPPCRVSSPLPRV-----QPPAACPAPLLRVQPP 546
Query: 76 RPGAPEAGSIP 86
+P A P
Sbjct: 547 AVSSPPACPAP 557
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 32.0 bits (71), Expect = 0.60
Identities = 49/207 (23%), Positives = 67/207 (32%), Gaps = 26/207 (12%)
Query: 3 PTIPVLPQTGNQLGGPPSWTGRRAASPTPHPL-----PPCRRRLRLLLRQAKKLGRLLGA 57
P P + +G +G P P P PP R L + KL L
Sbjct: 607 PLPPARSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQERNLPEGTERPPKLCSSLPG 666
Query: 58 QRRPPVSCDLPVLLSAEARPGAPEAGSIP--------VAWRQLQPPQTAARWRRAGAREQ 109
Q PP V + + P +P G P +A PP RR+ + +
Sbjct: 667 QGPPPY-----VFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSR 721
Query: 110 AGPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRANGTRTA 169
GP G + L Y T PG + R + V T A GT +
Sbjct: 722 PGPTEGDAEGEAEGPVGSTLGSYATLTRRPG-RSALVRTSPSV------TPTPARGTPRS 774
Query: 170 TPCSLPSACRRCCPPTPTAHFSLLQAP 196
+L A R+ PP P S + P
Sbjct: 775 QSFAL-RARRKGPPPPPPKRLSSVSGP 800
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 32.0 bits (71), Expect = 0.60
Identities = 49/207 (23%), Positives = 67/207 (32%), Gaps = 26/207 (12%)
Query: 3 PTIPVLPQTGNQLGGPPSWTGRRAASPTPHPL-----PPCRRRLRLLLRQAKKLGRLLGA 57
P P + +G +G P P P PP R L + KL L
Sbjct: 689 PLPPARSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQERNLPEGTERPPKLCSSLPG 748
Query: 58 QRRPPVSCDLPVLLSAEARPGAPEAGSIP--------VAWRQLQPPQTAARWRRAGAREQ 109
Q PP V + + P +P G P +A PP RR+ + +
Sbjct: 749 QGPPPY-----VFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSR 803
Query: 110 AGPGRGWRDSATRLGRPRALADYRTSILPPGFHTCRPRGNNDVGILGGRPLTRANGTRTA 169
GP G + L Y T PG + R + V T A GT +
Sbjct: 804 PGPTEGDAEGEAEGPVGSTLGSYATLTRRPG-RSALVRTSPSV------TPTPARGTPRS 856
Query: 170 TPCSLPSACRRCCPPTPTAHFSLLQAP 196
+L A R+ PP P S + P
Sbjct: 857 QSFAL-RARRKGPPPPPPKRLSSVSGP 882
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,657,678
Number of Sequences: 37866
Number of extensions: 851244
Number of successful extensions: 3601
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 3522
Number of HSP's gapped (non-prelim): 230
length of query: 274
length of database: 18,247,518
effective HSP length: 101
effective length of query: 173
effective length of database: 14,423,052
effective search space: 2495187996
effective search space used: 2495187996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.