Search of human proteins with 112789564

Search of human proteins with 112789564

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|112789564 interferon kappa precursor [Homo sapiens]
         (207 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|112789564 interferon kappa precursor [Homo sapiens]                428   e-120
gi|4504603 interferon, beta 1, fibroblast [Homo sapiens]               96   3e-20
gi|4504605 interferon, omega 1 [Homo sapiens]                          91   5e-19
gi|170763491 interferon, alpha 14 [Homo sapiens]                       89   3e-18
gi|10880985 interferon, alpha 17 [Homo sapiens]                        86   3e-17
gi|28882045 interferon, epsilon [Homo sapiens]                         84   8e-17
gi|4504589 interferon, alpha 10 [Homo sapiens]                         81   5e-16
gi|4504593 interferon, alpha 16 [Homo sapiens]                         81   5e-16
gi|71143135 interferon, alpha 7 [Homo sapiens]                         80   2e-15
gi|42476083 interferon, alpha 8 [Homo sapiens]                         79   4e-15
gi|4504597 interferon, alpha 5 [Homo sapiens]                          78   6e-15
gi|169791013 interferon, alpha 21 [Homo sapiens]                       78   6e-15
gi|13128950 interferon, alpha 1 [Homo sapiens]                         77   1e-14
gi|10835103 interferon, alpha 4 [Homo sapiens]                         77   1e-14
gi|194394174 interferon, alpha 13 precursor [Homo sapiens]             75   4e-14
gi|11128015 interferon, alpha 6 [Homo sapiens]                         75   4e-14
gi|11067751 interferon, alpha 2 [Homo sapiens]                         71   6e-13
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H...    34   0.100
gi|29826329 p21-activated kinase 7 [Homo sapiens]                      33   0.13 
gi|24308191 p21-activated kinase 7 [Homo sapiens]                      33   0.13 
gi|31652238 cut-like homeobox 1 isoform c [Homo sapiens]               32   0.29 
gi|31652236 cut-like homeobox 1 isoform b [Homo sapiens]               32   0.29 
gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]        31   0.65 
gi|116812628 coiled-coil domain containing 67 [Homo sapiens]           31   0.65 
gi|16418351 coiled-coil domain containing 97 [Homo sapiens]            31   0.65 
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s...    31   0.85 
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    31   0.85 
gi|46852390 coiled-coil domain containing 6 [Homo sapiens]             31   0.85 
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    30   1.4  
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    30   1.4  

>gi|112789564 interferon kappa precursor [Homo sapiens]
          Length = 207

 Score =  428 bits (1101), Expect = e-120
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MSTKPDMIQKCLWLEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECL 60
           MSTKPDMIQKCLWLEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECL
Sbjct: 1   MSTKPDMIQKCLWLEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECL 60

Query: 61  RENIAFELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFSQHTFKYWKERHLKQIQIGLDQ 120
           RENIAFELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFSQHTFKYWKERHLKQIQIGLDQ
Sbjct: 61  RENIAFELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFSQHTFKYWKERHLKQIQIGLDQ 120

Query: 121 QAEYLNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSD 180
           QAEYLNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSD
Sbjct: 121 QAEYLNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSD 180

Query: 181 CAWEIVRVEIRRCLYYFYKFTALFRRK 207
           CAWEIVRVEIRRCLYYFYKFTALFRRK
Sbjct: 181 CAWEIVRVEIRRCLYYFYKFTALFRRK 207


>gi|4504603 interferon, beta 1, fibroblast [Homo sapiens]
          Length = 187

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 68/200 (34%), Positives = 94/200 (47%), Gaps = 15/200 (7%)

Query: 7   MIQKCLWLEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECLRENIAF 66
           M  KCL    L+  F    LS+  NLL    R   +Q  + L  ++      CL++ + F
Sbjct: 1   MTNKCLLQIALLLCFSTTALSMSYNLLGFLQRSSNFQCQKLLWQLNGRLEY-CLKDRMNF 59

Query: 67  ELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFSQHTFKY-WKERHLKQIQIGLDQQAEYL 125
           ++P+E  Q  Q  K D     YEM    F IF Q +    W E  ++ +   +  Q  +L
Sbjct: 60  DIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHL 119

Query: 126 NQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEI 185
              LEE K E ED    K             +SSL L+RY+ RI ++LK K+YS CAW I
Sbjct: 120 KTVLEE-KLEKEDFTRGK------------LMSSLHLKRYYGRILHYLKAKEYSHCAWTI 166

Query: 186 VRVEIRRCLYYFYKFTALFR 205
           VRVEI R  Y+  + T   R
Sbjct: 167 VRVEILRNFYFINRLTGYLR 186


>gi|4504605 interferon, omega 1 [Homo sapiens]
          Length = 195

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 19/172 (11%)

Query: 27  SLDCNLLNVH--LRRVTWQNLRHLSSMSNSFPVECLRENIAFELPQEFLQYTQPMKRDIK 84
           SL C+L   H  L R T   L  +  +S   P  CL++   F  PQE ++ +Q  K  + 
Sbjct: 21  SLGCDLPQNHGLLSRNTLVLLHQMRRIS---PFLCLKDRRDFRFPQEMVKGSQLQKAHVM 77

Query: 85  KAFYEMSLQAFNIF-SQHTFKYWKERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMKEMK 143
              +EM  Q F++F ++ +   W    L Q+  GL QQ ++L  CL +   E E    + 
Sbjct: 78  SVLHEMLQQIFSLFHTERSSAAWNMTLLDQLHTGLHQQLQHLETCLLQVVGEGESAGAIS 137

Query: 144 ENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEIVRVEIRRCLY 195
                          +L LRRYF  I  +LKEKKYSDCAWE+VR+EI + L+
Sbjct: 138 S-------------PALTLRRYFQGIRVYLKEKKYSDCAWEVVRMEIMKSLF 176


>gi|170763491 interferon, alpha 14 [Homo sapiens]
          Length = 189

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 62/182 (34%), Positives = 85/182 (46%), Gaps = 15/182 (8%)

Query: 27  SLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECLRENIAFELPQEFLQYTQPMKRDIKKA 86
           SL CNL   H      + L  ++ M    P  CL++   FE PQE     Q  K      
Sbjct: 21  SLGCNLSQTHSLN-NRRTLMLMAQMRRISPFSCLKDRHDFEFPQEEFDGNQFQKAQAISV 79

Query: 87  FYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMKEMKEN 145
            +EM  Q FN+FS +++   W E  L++  I L QQ   L  C+ ++    E+   M E+
Sbjct: 80  LHEMMQQTFNLFSTKNSSAAWDETLLEKFYIELFQQMNDLEACVIQEVGV-EETPLMNED 138

Query: 146 EMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEIVRVEIRRCLYYFYKFTALFR 205
                       S L +++YF RI  +L EKKYS CAWE+VR EI R L +        R
Sbjct: 139 ------------SILAVKKYFQRITLYLMEKKYSPCAWEVVRAEIMRSLSFSTNLQKRLR 186

Query: 206 RK 207
           RK
Sbjct: 187 RK 188


>gi|10880985 interferon, alpha 17 [Homo sapiens]
          Length = 189

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 66/203 (32%), Positives = 92/203 (45%), Gaps = 24/203 (11%)

Query: 12  LWLEILMGIFIAG---TLSLDCNLLNVHL---RRVTWQNLRHLSSMSNSFPVECLRENIA 65
           L   +LM + +       SL C+L   H    RR     L  L+ M    P  CL++   
Sbjct: 3   LSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRA----LILLAQMGRISPFSCLKDRHD 58

Query: 66  FELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEY 124
           F LPQE     Q  K       +EM  Q FN+FS + +   W++  L++    L QQ   
Sbjct: 59  FGLPQEEFDGNQFQKTQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNN 118

Query: 125 LNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWE 184
           L  C+ ++    E+   M E+            S L +R+YF RI  +L EKKYS CAWE
Sbjct: 119 LEACVIQEVGM-EETPLMNED------------SILAVRKYFQRITLYLTEKKYSPCAWE 165

Query: 185 IVRVEIRRCLYYFYKFTALFRRK 207
           +VR EI R L +      + RRK
Sbjct: 166 VVRAEIMRSLSFSTNLQKILRRK 188


>gi|28882045 interferon, epsilon [Homo sapiens]
          Length = 208

 Score = 84.0 bits (206), Expect = 8e-17
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 14/196 (7%)

Query: 7   MIQKCLWLEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECLRENIAF 66
           MI K  +  +L+ +      SLD  L+    R+V  ++L+ L+ +      +CL     F
Sbjct: 1   MIIKHFFGTVLVLLASTTIFSLDLKLIIFQQRQVNQESLKLLNKLQTLSIQQCLPHRKNF 60

Query: 67  ELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFSQH-TFKYWKERHLKQIQIGLDQQAEYL 125
            LPQ+ L   Q  K       +EM  Q F++F  + +   W+E H ++  I L QQ EYL
Sbjct: 61  LLPQKSLSPQQYQKGHTLAILHEMLQQIFSLFRANISLDGWEENHTEKFLIQLHQQLEYL 120

Query: 126 NQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEI 185
              +  +        E     +     R      L+++ YF RI ++L+ + YS CAW I
Sbjct: 121 EALMGLEA-------EKLSGTLGSDNLR------LQVKMYFRRIHDYLENQDYSTCAWAI 167

Query: 186 VRVEIRRCLYYFYKFT 201
           V+VEI RCL++ +  T
Sbjct: 168 VQVEISRCLFFVFSLT 183


>gi|4504589 interferon, alpha 10 [Homo sapiens]
          Length = 189

 Score = 81.3 bits (199), Expect = 5e-16
 Identities = 64/203 (31%), Positives = 90/203 (44%), Gaps = 24/203 (11%)

Query: 12  LWLEILMGIFIAG---TLSLDCNLLNVHL---RRVTWQNLRHLSSMSNSFPVECLRENIA 65
           L   +LM + +       SL C+L   H    RR     L  L  M    P  CL++   
Sbjct: 3   LSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRA----LILLGQMGRISPFSCLKDRHD 58

Query: 66  FELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEY 124
           F +PQE     Q  K       +EM  Q FN+FS + +   W++  L++    L QQ   
Sbjct: 59  FRIPQEEFDGNQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLND 118

Query: 125 LNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWE 184
           L  C+ ++    E+   M E+            S L +R+YF RI  +L E+KYS CAWE
Sbjct: 119 LEACVIQEVGV-EETPLMNED------------SILAVRKYFQRITLYLIERKYSPCAWE 165

Query: 185 IVRVEIRRCLYYFYKFTALFRRK 207
           +VR EI R L +        RRK
Sbjct: 166 VVRAEIMRSLSFSTNLQKRLRRK 188


>gi|4504593 interferon, alpha 16 [Homo sapiens]
          Length = 189

 Score = 81.3 bits (199), Expect = 5e-16
 Identities = 66/203 (32%), Positives = 89/203 (43%), Gaps = 24/203 (11%)

Query: 12  LWLEILMGIFIAG---TLSLDCNLLNVHL---RRVTWQNLRHLSSMSNSFPVECLRENIA 65
           L   +LM + +       SL C+L   H    RR     L  L+ M       CL++   
Sbjct: 3   LSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRA----LILLAQMGRISHFSCLKDRYD 58

Query: 66  FELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEY 124
           F  PQE     Q  K     AF+EM  Q FN+FS + +   W E  L +  I L QQ   
Sbjct: 59  FGFPQEVFDGNQFQKAQAISAFHEMIQQTFNLFSTKDSSAAWDETLLDKFYIELFQQLND 118

Query: 125 LNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWE 184
           L  C+ ++    E++  M E+            S L +R+YF RI  +L  KKYS CAWE
Sbjct: 119 LEACVTQEVGV-EEIALMNED------------SILAVRKYFQRITLYLMGKKYSPCAWE 165

Query: 185 IVRVEIRRCLYYFYKFTALFRRK 207
           +VR EI R   +        RRK
Sbjct: 166 VVRAEIMRSFSFSTNLQKGLRRK 188


>gi|71143135 interferon, alpha 7 [Homo sapiens]
          Length = 189

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 15/195 (7%)

Query: 14  LEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECLRENIAFELPQEFL 73
           L +++ +      SL C+L   H  R   + L  L+ M    P  CL++   F  P+E  
Sbjct: 8   LMVVLVLSYKSICSLGCDLPQTHSLR-NRRALILLAQMGRISPFSCLKDRHEFRFPEEEF 66

Query: 74  QYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEYLNQCLEED 132
              Q  K       +EM  Q FN+FS + +   W++  L++    L QQ   L  C+ ++
Sbjct: 67  DGHQFQKTQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLEACVIQE 126

Query: 133 KNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEIVRVEIRR 192
               E+   M E+ +            L +R+YF RI  +L EKKYS CAWE+VR EI R
Sbjct: 127 VGV-EETPLMNEDFI------------LAVRKYFQRITLYLMEKKYSPCAWEVVRAEIMR 173

Query: 193 CLYYFYKFTALFRRK 207
              +        RRK
Sbjct: 174 SFSFSTNLKKGLRRK 188


>gi|42476083 interferon, alpha 8 [Homo sapiens]
          Length = 189

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 59/170 (34%), Positives = 77/170 (45%), Gaps = 21/170 (12%)

Query: 27  SLDCNLLNVHL---RRVTWQNLRHLSSMSNSFPVECLRENIAFELPQEFLQYTQPMKRDI 83
           SL C+L   H    RR     L  L+ M    P  CL++   FE PQE     Q  K   
Sbjct: 21  SLGCDLPQTHSLGNRRA----LILLAQMRRISPFSCLKDRHDFEFPQEEFDDKQFQKAQA 76

Query: 84  KKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMKEM 142
               +EM  Q FN+FS + +     E  L +  I LDQQ   L  C+ ++    E     
Sbjct: 77  ISVLHEMIQQTFNLFSTKDSSAALDETLLDEFYIELDQQLNDLESCVMQEVGVIESPLMY 136

Query: 143 KENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEIVRVEIRR 192
           ++             S L +R+YF RI  +L EKKYS CAWE+VR EI R
Sbjct: 137 ED-------------SILAVRKYFQRITLYLTEKKYSSCAWEVVRAEIMR 173


>gi|4504597 interferon, alpha 5 [Homo sapiens]
          Length = 189

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 59/182 (32%), Positives = 78/182 (42%), Gaps = 15/182 (8%)

Query: 27  SLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECLRENIAFELPQEFLQYTQPMKRDIKKA 86
           SL C+L   H      + L  ++ M    P  CL++   F  PQE     Q  K      
Sbjct: 21  SLGCDLPQTHSLS-NRRTLMIMAQMGRISPFSCLKDRHDFGFPQEEFDGNQFQKAQAISV 79

Query: 87  FYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMKEMKEN 145
            +EM  Q FN+FS + +   W E  L +    L QQ   L  C+ ++    ED   M  +
Sbjct: 80  LHEMIQQTFNLFSTKDSSATWDETLLDKFYTELYQQLNDLEACMMQEVGV-EDTPLMNVD 138

Query: 146 EMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEIVRVEIRRCLYYFYKFTALFR 205
                       S L +R+YF RI  +L EKKYS CAWE+VR EI R            R
Sbjct: 139 ------------SILTVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSFSLSANLQERLR 186

Query: 206 RK 207
           RK
Sbjct: 187 RK 188


>gi|169791013 interferon, alpha 21 [Homo sapiens]
          Length = 189

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 62/203 (30%), Positives = 87/203 (42%), Gaps = 24/203 (11%)

Query: 12  LWLEILMGIFIAG---TLSLDCNLLNVHL---RRVTWQNLRHLSSMSNSFPVECLRENIA 65
           L   +LM + +       SL C+L   H    RR     L  L+ M    P  CL++   
Sbjct: 3   LSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRA----LILLAQMGRISPFSCLKDRHD 58

Query: 66  FELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEY 124
           F  PQE     Q  K       +EM  Q FN+FS + +   W++  L++    L+QQ   
Sbjct: 59  FGFPQEEFDGNQFQKAQAISVLHEMIQQTFNLFSTKDSSATWEQSLLEKFSTELNQQLND 118

Query: 125 LNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWE 184
           L  C+ ++    E      +             S L +++YF RI  +L EKKYS CAWE
Sbjct: 119 LEACVIQEVGVEETPLMNVD-------------SILAVKKYFQRITLYLTEKKYSPCAWE 165

Query: 185 IVRVEIRRCLYYFYKFTALFRRK 207
           +VR EI R       F    RRK
Sbjct: 166 VVRAEIMRSFSLSKIFQERLRRK 188


>gi|13128950 interferon, alpha 1 [Homo sapiens]
          Length = 189

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 62/195 (31%), Positives = 85/195 (43%), Gaps = 15/195 (7%)

Query: 14  LEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECLRENIAFELPQEFL 73
           L +L+ +    + SL C+L   H      + L  L+ MS   P  CL +   F  PQE  
Sbjct: 8   LMVLVVLSCKSSCSLGCDLPETHSLD-NRRTLMLLAQMSRISPSSCLMDRHDFGFPQEEF 66

Query: 74  QYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEYLNQCLEED 132
              Q  K       +E+  Q FN+F+ + +   W E  L +    L QQ   L  C+   
Sbjct: 67  DGNQFQKAPAISVLHELIQQIFNLFTTKDSSAAWDEDLLDKFCTELYQQLNDLEACV--- 123

Query: 133 KNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEIVRVEIRR 192
                 M+E +  E     A     S L +++YF RI  +L EKKYS CAWE+VR EI R
Sbjct: 124 ------MQEERVGETPLMNAD----SILAVKKYFRRITLYLTEKKYSPCAWEVVRAEIMR 173

Query: 193 CLYYFYKFTALFRRK 207
            L          RRK
Sbjct: 174 SLSLSTNLQERLRRK 188


>gi|10835103 interferon, alpha 4 [Homo sapiens]
          Length = 189

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 63/203 (31%), Positives = 89/203 (43%), Gaps = 24/203 (11%)

Query: 12  LWLEILMGIFIAG---TLSLDCNLLNVHL---RRVTWQNLRHLSSMSNSFPVECLRENIA 65
           L   +LM + +       SL C+L   H    RR     L  L+ M       CL++   
Sbjct: 3   LSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRA----LILLAQMGRISHFSCLKDRHD 58

Query: 66  FELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEY 124
           F  P+E     Q  K       +EM  Q FN+FS + +   W++  L++    L QQ   
Sbjct: 59  FGFPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLND 118

Query: 125 LNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWE 184
           L  C+ ++    E+   M E+            S L +R+YF RI  +L EKKYS CAWE
Sbjct: 119 LEACVIQEVGV-EETPLMNED------------SILAVRKYFQRITLYLTEKKYSPCAWE 165

Query: 185 IVRVEIRRCLYYFYKFTALFRRK 207
           +VR EI R L +        RRK
Sbjct: 166 VVRAEIMRSLSFSTNLQKRLRRK 188


>gi|194394174 interferon, alpha 13 precursor [Homo sapiens]
          Length = 190

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 62/195 (31%), Positives = 84/195 (43%), Gaps = 15/195 (7%)

Query: 14  LEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECLRENIAFELPQEFL 73
           L  L+ +    + SL C+L   H      + L  L+ MS   P  CL +   F  PQE  
Sbjct: 9   LMALVVLSCKSSCSLGCDLPETHSLD-NRRTLMLLAQMSRISPSSCLMDRHDFGFPQEEF 67

Query: 74  QYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEYLNQCLEED 132
              Q  K       +E+  Q FN+F+ + +   W E  L +    L QQ   L  C+   
Sbjct: 68  DGNQFQKAPAISVLHELIQQIFNLFTTKDSSAAWDEDLLDKFCTELYQQLNDLEACV--- 124

Query: 133 KNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEIVRVEIRR 192
                 M+E +  E     A     S L +++YF RI  +L EKKYS CAWE+VR EI R
Sbjct: 125 ------MQEERVGETPLMNAD----SILAVKKYFRRITLYLTEKKYSPCAWEVVRAEIMR 174

Query: 193 CLYYFYKFTALFRRK 207
            L          RRK
Sbjct: 175 SLSLSTNLQERLRRK 189


>gi|11128015 interferon, alpha 6 [Homo sapiens]
          Length = 189

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 61/201 (30%), Positives = 85/201 (42%), Gaps = 27/201 (13%)

Query: 14  LEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECLRENIAFELPQEFL 73
           L  L+ +    + SLDC+L   H      + +  L+ M       CL++   F  PQE  
Sbjct: 8   LMALVVLSCKSSCSLDCDLPQTHSLGHR-RTMMLLAQMRRISLFSCLKDRHDFRFPQEEF 66

Query: 74  QYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEYLNQCLEED 132
              Q  K +     +E+  Q FN+FS + +   W ER L ++   L QQ   L  C+ ++
Sbjct: 67  DGNQFQKAEAISVLHEVIQQTFNLFSTKDSSVAWDERLLDKLYTELYQQLNDLEACVMQE 126

Query: 133 ------KNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEIV 186
                    NED                   S L +R+YF RI  +L EKKYS CAWE+V
Sbjct: 127 VWVGGTPLMNED-------------------SILAVRKYFQRITLYLTEKKYSPCAWEVV 167

Query: 187 RVEIRRCLYYFYKFTALFRRK 207
           R EI R            RRK
Sbjct: 168 RAEIMRSFSSSRNLQERLRRK 188


>gi|11067751 interferon, alpha 2 [Homo sapiens]
          Length = 188

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 59/180 (32%), Positives = 82/180 (45%), Gaps = 16/180 (8%)

Query: 14  LEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECLRENIAFELPQEFL 73
           L  L+ +    + S+ C+L   H    + + L  L+ M       CL++   F  PQE  
Sbjct: 8   LVALLVLSCKSSCSVGCDLPQTHSLG-SRRTLMLLAQMRRISLFSCLKDRHDFGFPQEEF 66

Query: 74  QYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEYLNQCLEED 132
              Q  K +     +EM  Q FN+FS + +   W E  L +    L QQ   L  C+ + 
Sbjct: 67  G-NQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACVIQG 125

Query: 133 KNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEIVRVEIRR 192
               E    MKE+            S L +R+YF RI  +LKEKKYS CAWE+VR EI R
Sbjct: 126 VGVTETPL-MKED------------SILAVRKYFQRITLYLKEKKYSPCAWEVVRAEIMR 172


>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
            sapiens]
          Length = 1940

 Score = 33.9 bits (76), Expect = 0.100
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 5/98 (5%)

Query: 84   KKAFYEMSLQAFNIFSQHTFKYWKERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMKEMK 143
            KKA  E   QA +       K      L + +  L+QQ E L   LE++K    D++  K
Sbjct: 997  KKALQEAHQQALDDLQAEEDKV---NSLNKTKSKLEQQVEDLESSLEQEKKLRVDLERNK 1053

Query: 144  ENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDC 181
                   + ++ Q S L+L     ++D  LK+K +  C
Sbjct: 1054 RK--LEGDLKLAQESILDLENDKQQLDERLKKKDFEYC 1089


>gi|29826329 p21-activated kinase 7 [Homo sapiens]
          Length = 719

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 99  SQHTFKYWKERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMK--EMKENEMKPSEARVPQ 156
           S  T  Y  E++ ++   G D    Y      +       MK  E   +E+KP ++   +
Sbjct: 135 SDTTADYTTEKYREKSLYGDDLDPYYRGSHAAKQNGHVMKMKHGEAYYSEVKPLKSDFAR 194

Query: 157 LSSLELRRYFHRIDNFLKEKKYSDCAWEIVRVEIRRCLYYFYKFT 201
            S+     Y   +D+  K  +YSD  WE  R      L Y ++FT
Sbjct: 195 FSA----DYHSHLDSLSKPSEYSDLKWEYQRASSSSPLDYSFQFT 235


>gi|24308191 p21-activated kinase 7 [Homo sapiens]
          Length = 719

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 99  SQHTFKYWKERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMK--EMKENEMKPSEARVPQ 156
           S  T  Y  E++ ++   G D    Y      +       MK  E   +E+KP ++   +
Sbjct: 135 SDTTADYTTEKYREKSLYGDDLDPYYRGSHAAKQNGHVMKMKHGEAYYSEVKPLKSDFAR 194

Query: 157 LSSLELRRYFHRIDNFLKEKKYSDCAWEIVRVEIRRCLYYFYKFT 201
            S+     Y   +D+  K  +YSD  WE  R      L Y ++FT
Sbjct: 195 FSA----DYHSHLDSLSKPSEYSDLKWEYQRASSSSPLDYSFQFT 235


>gi|31652238 cut-like homeobox 1 isoform c [Homo sapiens]
          Length = 676

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 103 FKYWKERHLKQIQIGLDQQAEYLNQCLEEDKNEN----EDMKEMKENEMKPSEARVPQLS 158
           F+YWK   L+Q+Q  LD  A  L    +E +       E  +E K+N  +    +V  L 
Sbjct: 9   FQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPL- 67

Query: 159 SLELRRYFHRIDNFLKEKKYSDCAW 183
              L+ +   ID   K  K ++ A+
Sbjct: 68  ---LKSFQGEIDALSKRSKEAEAAF 89


>gi|31652236 cut-like homeobox 1 isoform b [Homo sapiens]
          Length = 678

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 103 FKYWKERHLKQIQIGLDQQAEYLNQCLEEDKNEN----EDMKEMKENEMKPSEARVPQLS 158
           F+YWK   L+Q+Q  LD  A  L    +E +       E  +E K+N  +    +V  L 
Sbjct: 9   FQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPL- 67

Query: 159 SLELRRYFHRIDNFLKEKKYSDCAW 183
              L+ +   ID   K  K ++ A+
Sbjct: 68  ---LKSFQGEIDALSKRSKEAEAAF 89


>gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]
          Length = 841

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 12/81 (14%)

Query: 92  LQAFNIFSQHTFKYWKERHLKQIQIGLDQ----QAEYLNQCLEE-------DKNENEDMK 140
           LQA  + S    K W ER LK+ +  L Q    Q E L QC E+        + E +D++
Sbjct: 511 LQA-QVHSMDGAKGWFERRLKEAEESLQQQQQEQEEALKQCREQHAAELKGKEEELQDVR 569

Query: 141 EMKENEMKPSEARVPQLSSLE 161
           +  E   +  +  +  +SSL+
Sbjct: 570 DQLEQAQEERDCHLKTISSLK 590


>gi|116812628 coiled-coil domain containing 67 [Homo sapiens]
          Length = 604

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 13/124 (10%)

Query: 68  LPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFSQHTFKYWKERHLKQIQIGLDQQAEYLNQ 127
           L   +L   +  +R IK+ F  M  Q  +           E+ L +I+  L Q  EY N 
Sbjct: 313 LESSYLPSIKEPERKIKELFSVMQDQPNH-----------EKELNKIRSQLQQVEEYHNS 361

Query: 128 CLEEDKNENEDM-KEMKENEMK-PSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWEI 185
             E  +NE  D+ +E+ + E+   +  +   L   +L+      +  L ++K SD  ++ 
Sbjct: 362 EQERMRNEISDLTEELHQKEITIATVTKKAALLEKQLKMELEIKEKMLAKQKVSDMKYKA 421

Query: 186 VRVE 189
           VR E
Sbjct: 422 VRTE 425


>gi|16418351 coiled-coil domain containing 97 [Homo sapiens]
          Length = 343

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 4/50 (8%)

Query: 106 WKERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMKEMKENEMKPSEARVP 155
           ++ER L+Q    L QQ E    CLEE++ E ED  E  +   K SEA VP
Sbjct: 228 YEERELQQ---RLLQQQEEEEACLEEEE-EEEDSDEEDQRSGKDSEAWVP 273


>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
            sapiens]
          Length = 1935

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 5/95 (5%)

Query: 84   KKAFYEMSLQAFNIFSQHTFKYWKERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMKEMK 143
            KKA  E   QA +       K      L + ++ L+QQ + L   LE++K    D++  K
Sbjct: 996  KKALQEAHQQALDDLQAEEDKV---NTLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAK 1052

Query: 144  ENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKY 178
                   + ++ Q S ++L     ++D  LK+K +
Sbjct: 1053 RK--LEGDLKLTQESIMDLENDKQQLDERLKKKDF 1085


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
            sapiens]
          Length = 1939

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 107  KERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYF 166
            K   L + +I L+QQ + L   LE++K    D++  K       + ++ Q S++++    
Sbjct: 1020 KVNTLTKAKIKLEQQVDDLEGSLEQEKKIRMDLERAKRK--LEGDLKLAQESTMDIENDK 1077

Query: 167  HRIDNFLKEKKY 178
             ++D  LK+K++
Sbjct: 1078 QQLDEKLKKKEF 1089


>gi|46852390 coiled-coil domain containing 6 [Homo sapiens]
          Length = 474

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 9/71 (12%)

Query: 108 ERHLKQIQIGLDQQAEYLNQCLEEDKN---ENEDMKEMKENEMKPSEARVPQL----SSL 160
           ER  KQ++    Q +E + Q LEE+++   EN  ++   + EM+  EA   QL    SSL
Sbjct: 270 ERLKKQLRAAQLQHSEKMAQYLEEERHMREENLRLQRKLQREMERREALCRQLSESESSL 329

Query: 161 EL--RRYFHRI 169
           E+   RYF+ +
Sbjct: 330 EMDDERYFNEM 340


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 107  KERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYF 166
            K   L + +I L+QQ + L   LE++K    D++  K       + ++ Q S +++    
Sbjct: 1022 KVNTLTKAKIKLEQQVDDLEGSLEQEKKLRMDLERAKRK--LEGDLKLAQESIMDIENEK 1079

Query: 167  HRIDNFLKEKKY 178
             ++D  LK+K++
Sbjct: 1080 QQLDEKLKKKEF 1091


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 107  KERHLKQIQIGLDQQAEYLNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYF 166
            K   L + +I L+QQ + L   LE++K    D++  K       + ++ Q S +++    
Sbjct: 1022 KVNTLTKAKIKLEQQVDDLEGSLEQEKKLRMDLERAKRK--LEGDLKLAQESIMDIENEK 1079

Query: 167  HRIDNFLKEKKY 178
             ++D  LK+K++
Sbjct: 1080 QQLDEKLKKKEF 1091


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.136    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,675,168
Number of Sequences: 37866
Number of extensions: 316504
Number of successful extensions: 2166
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 2084
Number of HSP's gapped (non-prelim): 121
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.